Query 013951
Match_columns 433
No_of_seqs 126 out of 1366
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 20:09:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013951.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013951hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.3E-60 7.9E-65 456.7 30.8 394 5-429 11-415 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 4.1E-56 1.4E-60 434.6 34.3 401 1-427 1-428 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2.6E-56 8.9E-61 437.5 30.3 414 1-429 1-440 (482)
4 2acv_A Triterpene UDP-glucosyl 100.0 7E-55 2.4E-59 424.3 30.5 403 5-431 7-429 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 8E-55 2.7E-59 422.8 30.0 399 1-429 1-413 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 4.3E-44 1.5E-48 346.9 27.2 369 5-431 10-392 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.4E-42 4.9E-47 333.8 19.6 336 6-432 21-372 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.3E-41 1.1E-45 325.5 17.0 346 8-431 1-371 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 6.2E-40 2.1E-44 316.9 20.9 350 6-431 19-384 (415)
10 1rrv_A Glycosyltransferase GTF 100.0 4.8E-40 1.6E-44 317.6 18.3 355 8-431 1-372 (416)
11 3h4t_A Glycosyltransferase GTF 100.0 1.6E-39 5.6E-44 312.2 21.6 339 8-431 1-354 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 3.5E-39 1.2E-43 310.3 23.4 351 5-431 2-369 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 1.8E-38 6.2E-43 308.1 23.8 355 1-431 1-370 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 1.3E-37 4.6E-42 302.7 18.1 352 5-431 18-406 (441)
15 2p6p_A Glycosyl transferase; X 100.0 6.1E-37 2.1E-41 292.8 19.8 331 8-431 1-350 (384)
16 4fzr_A SSFS6; structural genom 100.0 2.7E-35 9.4E-40 282.7 19.3 337 5-431 13-371 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.4E-33 4.6E-38 270.9 18.6 333 6-431 19-368 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 6.4E-33 2.2E-37 265.6 22.2 334 7-431 1-359 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 8.6E-31 2.9E-35 252.6 23.9 340 5-431 18-379 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 5.5E-28 1.9E-32 228.3 20.7 313 7-430 2-326 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.5E-26 5.3E-31 194.4 9.9 152 265-432 6-158 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 1.7E-18 5.7E-23 163.7 20.1 307 8-425 7-322 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 2E-15 7E-20 135.3 18.1 117 280-411 157-275 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.7 2.1E-16 7.1E-21 135.8 9.0 132 278-425 26-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.3 3.4E-11 1.2E-15 113.9 18.2 130 280-430 198-336 (376)
26 1vgv_A UDP-N-acetylglucosamine 99.3 1.7E-10 5.9E-15 109.3 17.7 327 8-430 1-344 (384)
27 3dzc_A UDP-N-acetylglucosamine 99.2 2.5E-10 8.5E-15 108.5 17.8 329 5-430 23-369 (396)
28 3okp_A GDP-mannose-dependent a 99.2 2.3E-09 7.7E-14 101.8 23.4 317 6-430 3-346 (394)
29 3ot5_A UDP-N-acetylglucosamine 99.2 9.2E-10 3.2E-14 104.7 20.0 321 5-430 25-363 (403)
30 3c48_A Predicted glycosyltrans 99.2 1E-09 3.5E-14 105.9 18.6 342 5-430 18-393 (438)
31 3beo_A UDP-N-acetylglucosamine 99.1 3.6E-08 1.2E-12 92.9 24.5 319 7-430 8-344 (375)
32 2x6q_A Trehalose-synthase TRET 99.1 5.8E-09 2E-13 99.9 18.2 81 339-430 291-381 (416)
33 2gek_A Phosphatidylinositol ma 99.0 3.4E-08 1.2E-12 94.0 22.9 313 6-430 19-351 (406)
34 3fro_A GLGA glycogen synthase; 99.0 4.9E-08 1.7E-12 93.8 23.2 80 341-430 311-398 (439)
35 2iuy_A Avigt4, glycosyltransfe 99.0 3.7E-09 1.3E-13 98.4 13.3 124 284-427 165-307 (342)
36 2r60_A Glycosyl transferase, g 99.0 2E-08 6.8E-13 98.6 18.4 136 282-430 263-426 (499)
37 4hwg_A UDP-N-acetylglucosamine 99.0 1.2E-08 4.2E-13 96.1 15.9 320 6-430 8-344 (385)
38 2iw1_A Lipopolysaccharide core 98.8 5.3E-07 1.8E-11 84.7 22.6 133 282-430 197-339 (374)
39 2jjm_A Glycosyl transferase, g 98.8 1.4E-07 4.9E-12 89.4 17.6 322 6-430 14-352 (394)
40 2vsy_A XCC0866; transferase, g 98.4 9.7E-05 3.3E-09 73.4 23.9 84 341-430 434-524 (568)
41 1rzu_A Glycogen synthase 1; gl 98.3 2.6E-05 8.9E-10 76.0 19.0 132 282-430 292-445 (485)
42 2qzs_A Glycogen synthase; glyc 98.3 3E-05 1E-09 75.5 18.6 132 282-430 293-446 (485)
43 3s28_A Sucrose synthase 1; gly 98.3 2.6E-05 8.8E-10 79.9 18.3 135 282-430 573-736 (816)
44 2hy7_A Glucuronosyltransferase 98.3 8.8E-05 3E-09 70.4 20.1 76 340-430 264-354 (406)
45 2f9f_A First mannosyl transfer 98.2 3.2E-06 1.1E-10 70.4 8.7 130 283-430 25-164 (177)
46 3oy2_A Glycosyltransferase B73 98.1 7E-05 2.4E-09 71.2 16.4 138 281-431 184-358 (413)
47 2xci_A KDO-transferase, 3-deox 98.0 0.00023 7.8E-09 66.7 17.7 81 341-428 260-346 (374)
48 3qhp_A Type 1 capsular polysac 97.2 0.00099 3.4E-08 54.2 8.2 130 281-430 2-142 (166)
49 4gyw_A UDP-N-acetylglucosamine 97.0 0.0031 1.1E-07 64.2 10.4 102 280-387 522-630 (723)
50 3q3e_A HMW1C-like glycosyltran 96.9 0.005 1.7E-07 60.4 10.6 101 281-387 441-549 (631)
51 3tov_A Glycosyl transferase fa 96.9 0.053 1.8E-06 49.9 17.3 106 5-143 6-115 (349)
52 1psw_A ADP-heptose LPS heptosy 96.9 0.046 1.6E-06 50.2 16.8 102 8-143 1-106 (348)
53 2bfw_A GLGA glycogen synthase; 96.2 0.022 7.5E-07 47.5 9.1 79 342-430 96-183 (200)
54 2x0d_A WSAF; GT4 family, trans 94.7 0.048 1.6E-06 51.5 6.5 82 340-431 294-382 (413)
55 3rhz_A GTF3, nucleotide sugar 93.7 0.028 9.5E-07 51.5 2.6 78 342-428 215-304 (339)
56 2ywr_A Phosphoribosylglycinami 90.2 5.3 0.00018 33.6 12.4 107 8-147 2-111 (216)
57 3vue_A GBSS-I, granule-bound s 89.5 0.36 1.2E-05 47.2 5.2 131 282-427 328-476 (536)
58 3auf_A Glycinamide ribonucleot 89.3 5 0.00017 34.0 11.6 109 6-147 21-132 (229)
59 1ccw_A Protein (glutamate muta 88.3 1.3 4.6E-05 34.2 6.8 50 6-55 2-51 (137)
60 3eod_A Protein HNR; response r 86.1 8.2 0.00028 28.6 10.3 38 1-42 1-38 (130)
61 3av3_A Phosphoribosylglycinami 86.1 8 0.00027 32.3 10.8 107 8-147 4-113 (212)
62 2gt1_A Lipopolysaccharide hept 86.1 0.71 2.4E-05 41.7 4.7 134 280-430 178-324 (326)
63 2x0d_A WSAF; GT4 family, trans 85.2 0.42 1.4E-05 45.0 2.8 41 5-45 44-89 (413)
64 2yxb_A Coenzyme B12-dependent 85.0 1.8 6.3E-05 34.5 6.1 49 6-54 17-65 (161)
65 2wqk_A 5'-nucleotidase SURE; S 84.4 1.2 4.1E-05 38.5 5.0 112 9-146 3-127 (251)
66 2bw0_A 10-FTHFDH, 10-formyltet 84.2 12 0.00042 33.6 11.8 106 5-147 20-130 (329)
67 1jkx_A GART;, phosphoribosylgl 83.8 14 0.00048 30.8 11.3 107 8-147 1-110 (212)
68 1y80_A Predicted cobalamin bin 83.5 3.1 0.00011 34.7 7.3 52 6-57 87-138 (210)
69 1g5t_A COB(I)alamin adenosyltr 82.7 19 0.00064 29.6 11.5 102 6-127 27-130 (196)
70 4ds3_A Phosphoribosylglycinami 82.5 4.6 0.00016 33.7 7.7 111 4-147 4-117 (209)
71 2rjn_A Response regulator rece 82.3 11 0.00039 28.9 9.9 37 1-41 1-37 (154)
72 3q0i_A Methionyl-tRNA formyltr 81.9 22 0.00074 31.8 12.4 100 6-147 6-116 (318)
73 2i2x_B MTAC, methyltransferase 81.6 4.1 0.00014 35.3 7.5 61 5-70 121-181 (258)
74 1meo_A Phosophoribosylglycinam 81.4 15 0.00051 30.6 10.5 107 8-147 1-110 (209)
75 1mvl_A PPC decarboxylase athal 80.6 2 6.9E-05 35.8 4.8 42 4-47 16-57 (209)
76 2phj_A 5'-nucleotidase SURE; S 80.6 2 6.8E-05 36.9 4.9 39 8-48 2-40 (251)
77 3gt7_A Sensor protein; structu 79.8 15 0.00051 28.2 9.8 37 1-41 1-37 (154)
78 3rfo_A Methionyl-tRNA formyltr 79.6 31 0.001 30.8 12.6 101 5-147 2-113 (317)
79 3zqu_A Probable aromatic acid 79.5 4.2 0.00014 33.9 6.4 39 7-46 4-42 (209)
80 3tqr_A Phosphoribosylglycinami 78.5 11 0.00036 31.6 8.6 109 6-147 4-114 (215)
81 3vue_A GBSS-I, granule-bound s 77.8 9.6 0.00033 37.0 9.4 44 1-44 1-52 (536)
82 3pdi_A Nitrogenase MOFE cofact 77.3 15 0.00051 35.1 10.4 35 105-144 391-425 (483)
83 3da8_A Probable 5'-phosphoribo 77.2 10 0.00036 31.7 8.2 110 4-147 9-120 (215)
84 3qjg_A Epidermin biosynthesis 76.3 3.2 0.00011 33.6 4.6 43 7-50 5-47 (175)
85 1fmt_A Methionyl-tRNA FMet for 76.2 23 0.00078 31.6 10.7 100 6-147 2-112 (314)
86 3u7q_B Nitrogenase molybdenum- 75.7 18 0.00062 34.9 10.6 96 7-144 364-469 (523)
87 3tqq_A Methionyl-tRNA formyltr 75.3 26 0.0009 31.2 10.9 99 7-147 2-111 (314)
88 2qs7_A Uncharacterized protein 75.3 3.3 0.00011 32.3 4.4 51 1-51 2-52 (144)
89 3lqk_A Dipicolinate synthase s 74.7 4 0.00014 33.8 5.0 41 5-45 5-45 (201)
90 3ezx_A MMCP 1, monomethylamine 74.5 7.5 0.00026 32.6 6.7 51 5-55 90-140 (215)
91 2ixd_A LMBE-related protein; h 73.8 17 0.00057 31.0 8.9 20 103-124 85-104 (242)
92 3mc3_A DSRE/DSRF-like family p 73.7 5.9 0.0002 30.3 5.5 45 7-51 15-62 (134)
93 4a1f_A DNAB helicase, replicat 73.5 21 0.00071 32.2 9.8 42 9-50 48-89 (338)
94 1kjn_A MTH0777; hypotethical p 73.4 5.7 0.0002 30.7 5.0 43 5-47 4-48 (157)
95 1qgu_B Protein (nitrogenase mo 73.3 33 0.0011 33.0 11.8 96 7-144 360-465 (519)
96 3kcq_A Phosphoribosylglycinami 72.9 21 0.00073 29.7 9.1 104 6-147 7-113 (215)
97 2ejb_A Probable aromatic acid 72.3 9.4 0.00032 31.2 6.6 38 8-46 2-39 (189)
98 4dim_A Phosphoribosylglycinami 71.5 15 0.0005 34.0 8.8 35 5-44 5-39 (403)
99 1sbz_A Probable aromatic acid 70.7 7.3 0.00025 32.1 5.6 39 8-47 1-40 (197)
100 1p3y_1 MRSD protein; flavoprot 70.0 3 0.0001 34.3 3.2 42 5-47 6-47 (194)
101 3mcu_A Dipicolinate synthase, 69.5 5.1 0.00018 33.3 4.4 40 6-46 4-44 (207)
102 3dfi_A Pseudoaglycone deacetyl 69.5 26 0.00088 30.4 9.3 42 101-144 131-182 (270)
103 3u7q_A Nitrogenase molybdenum- 66.1 14 0.00048 35.4 7.4 35 105-144 407-441 (492)
104 1ys7_A Transcriptional regulat 65.5 50 0.0017 27.2 10.3 32 116-147 50-88 (233)
105 3vot_A L-amino acid ligase, BL 64.3 9.6 0.00033 35.6 5.9 35 105-141 65-101 (425)
106 2lpm_A Two-component response 63.1 7 0.00024 29.4 3.8 38 106-145 44-86 (123)
107 3to5_A CHEY homolog; alpha(5)b 61.1 12 0.00041 28.5 4.9 40 108-149 50-98 (134)
108 1qzu_A Hypothetical protein MD 60.9 7.2 0.00025 32.4 3.7 42 5-47 17-59 (206)
109 3iqw_A Tail-anchored protein t 60.1 77 0.0026 28.4 10.8 41 8-48 16-57 (334)
110 1id1_A Putative potassium chan 60.0 5.7 0.00019 31.0 2.9 34 6-44 2-35 (153)
111 3bul_A Methionine synthase; tr 59.5 19 0.00064 35.2 6.9 52 6-57 97-148 (579)
112 2gk4_A Conserved hypothetical 59.5 10 0.00036 32.1 4.5 26 18-45 28-53 (232)
113 4dzz_A Plasmid partitioning pr 58.0 55 0.0019 26.3 9.0 38 10-47 4-42 (206)
114 2q6t_A DNAB replication FORK h 57.9 96 0.0033 29.0 11.6 42 9-50 202-244 (444)
115 2r8r_A Sensor protein; KDPD, P 57.8 18 0.0006 30.6 5.6 41 5-45 4-44 (228)
116 2ae2_A Protein (tropinone redu 57.7 87 0.003 26.5 11.2 41 1-44 1-42 (260)
117 3bgw_A DNAB-like replicative h 57.6 82 0.0028 29.5 11.0 42 9-50 199-240 (444)
118 3fgn_A Dethiobiotin synthetase 57.5 90 0.0031 26.6 12.8 125 7-148 25-167 (251)
119 2bln_A Protein YFBG; transfera 57.3 1E+02 0.0035 27.2 11.6 98 8-147 1-106 (305)
120 4grd_A N5-CAIR mutase, phospho 57.3 31 0.001 27.4 6.5 57 4-61 9-67 (173)
121 3gl9_A Response regulator; bet 56.6 19 0.00065 26.3 5.3 41 106-148 37-86 (122)
122 1mio_B Nitrogenase molybdenum 56.0 76 0.0026 29.9 10.5 34 106-144 376-409 (458)
123 4b4o_A Epimerase family protei 55.6 13 0.00044 32.6 4.8 33 8-44 1-33 (298)
124 3n7t_A Macrophage binding prot 55.3 26 0.00088 30.0 6.5 37 8-44 10-57 (247)
125 1g63_A Epidermin modifying enz 55.3 9.3 0.00032 31.0 3.4 39 8-47 3-41 (181)
126 1uan_A Hypothetical protein TT 54.9 60 0.0021 27.2 8.7 21 103-125 83-103 (227)
127 3tov_A Glycosyl transferase fa 53.8 82 0.0028 28.3 10.0 100 8-147 186-289 (349)
128 3io3_A DEHA2D07832P; chaperone 53.7 77 0.0026 28.6 9.7 41 7-47 17-60 (348)
129 2dzd_A Pyruvate carboxylase; b 53.0 78 0.0027 29.7 10.2 40 1-46 1-40 (461)
130 4e3z_A Putative oxidoreductase 52.8 38 0.0013 29.0 7.4 38 4-44 22-59 (272)
131 2q5c_A NTRC family transcripti 52.4 81 0.0028 25.7 8.9 38 107-149 134-171 (196)
132 3ih5_A Electron transfer flavo 52.4 24 0.00082 29.5 5.7 108 9-144 5-121 (217)
133 2zts_A Putative uncharacterize 51.9 15 0.00051 31.0 4.5 124 9-146 32-180 (251)
134 3kkl_A Probable chaperone prot 51.8 26 0.00088 29.9 5.9 38 7-44 3-51 (244)
135 2g1u_A Hypothetical protein TM 51.3 16 0.00056 28.3 4.3 36 4-44 16-51 (155)
136 2vo1_A CTP synthase 1; pyrimid 50.3 18 0.00062 31.2 4.4 42 5-46 20-64 (295)
137 3ouz_A Biotin carboxylase; str 50.2 57 0.0019 30.5 8.6 36 5-45 4-39 (446)
138 2gt1_A Lipopolysaccharide hept 50.1 12 0.00039 33.5 3.6 42 8-49 1-44 (326)
139 3t6k_A Response regulator rece 49.9 31 0.0011 25.7 5.6 41 107-149 40-89 (136)
140 3lp6_A Phosphoribosylaminoimid 48.6 43 0.0015 26.7 6.1 62 1-63 1-64 (174)
141 3lrx_A Putative hydrogenase; a 48.3 15 0.00051 28.9 3.6 37 7-46 23-59 (158)
142 1p9o_A Phosphopantothenoylcyst 47.5 13 0.00043 33.2 3.3 23 23-45 67-89 (313)
143 3l4e_A Uncharacterized peptida 47.3 46 0.0016 27.5 6.6 49 267-315 15-63 (206)
144 3m6m_D Sensory/regulatory prot 47.2 26 0.00088 26.4 4.8 41 106-148 49-100 (143)
145 2yvq_A Carbamoyl-phosphate syn 45.0 33 0.0011 26.4 5.0 96 11-143 27-130 (143)
146 1tvm_A PTS system, galactitol- 44.7 51 0.0017 24.1 5.8 39 4-42 18-57 (113)
147 3f6p_A Transcriptional regulat 44.4 35 0.0012 24.6 5.1 42 106-149 37-84 (120)
148 3sju_A Keto reductase; short-c 44.3 74 0.0025 27.4 7.9 59 5-68 21-79 (279)
149 2i2c_A Probable inorganic poly 44.0 12 0.0004 32.7 2.5 27 361-387 37-69 (272)
150 1xrs_B D-lysine 5,6-aminomutas 43.9 22 0.00075 30.7 4.1 50 6-55 119-177 (262)
151 3vps_A TUNA, NAD-dependent epi 43.9 20 0.00069 31.5 4.2 40 1-44 1-40 (321)
152 2w36_A Endonuclease V; hypoxan 43.8 19 0.00066 30.2 3.7 42 104-145 90-138 (225)
153 3ty2_A 5'-nucleotidase SURE; s 43.3 27 0.00094 30.0 4.6 42 5-48 9-50 (261)
154 1e2b_A Enzyme IIB-cellobiose; 43.2 50 0.0017 23.8 5.5 39 6-44 2-40 (106)
155 3pdi_B Nitrogenase MOFE cofact 42.8 21 0.00072 33.8 4.3 34 106-144 366-399 (458)
156 1z7e_A Protein aRNA; rossmann 42.6 56 0.0019 32.5 7.6 98 8-147 1-106 (660)
157 3gpi_A NAD-dependent epimerase 42.5 30 0.001 29.9 5.1 33 7-44 3-35 (286)
158 2qv7_A Diacylglycerol kinase D 41.7 47 0.0016 29.8 6.3 81 282-387 28-114 (337)
159 2x5n_A SPRPN10, 26S proteasome 41.3 1.4E+02 0.0048 24.1 9.0 59 10-70 110-171 (192)
160 1yt5_A Inorganic polyphosphate 41.0 13 0.00044 32.1 2.3 29 357-387 41-72 (258)
161 3lyu_A Putative hydrogenase; t 40.9 23 0.0008 27.1 3.6 114 7-143 18-136 (142)
162 3c3m_A Response regulator rece 40.7 49 0.0017 24.5 5.5 39 107-147 39-86 (138)
163 4e5v_A Putative THUA-like prot 40.5 37 0.0013 29.7 5.1 39 5-44 2-43 (281)
164 2an1_A Putative kinase; struct 40.4 17 0.00057 32.0 3.0 30 356-387 62-95 (292)
165 3lqk_A Dipicolinate synthase s 40.4 22 0.00077 29.3 3.5 56 376-432 120-190 (201)
166 3h7a_A Short chain dehydrogena 39.9 1.3E+02 0.0043 25.4 8.6 33 8-43 7-39 (252)
167 1hdo_A Biliverdin IX beta redu 39.4 41 0.0014 27.0 5.2 33 8-44 4-36 (206)
168 2bon_A Lipid kinase; DAG kinas 39.4 81 0.0028 28.1 7.5 78 282-387 33-118 (332)
169 3i6i_A Putative leucoanthocyan 39.4 1.1E+02 0.0038 27.1 8.6 100 6-144 9-117 (346)
170 1dbw_A Transcriptional regulat 39.4 57 0.002 23.5 5.6 41 107-149 39-86 (126)
171 3g0o_A 3-hydroxyisobutyrate de 39.0 15 0.00053 32.4 2.5 38 1-43 1-38 (303)
172 3tfo_A Putative 3-oxoacyl-(acy 38.8 1.1E+02 0.0038 26.1 8.0 33 8-43 4-36 (264)
173 3o1l_A Formyltetrahydrofolate 38.5 1.3E+02 0.0045 26.4 8.4 107 5-147 103-212 (302)
174 1rw7_A YDR533CP; alpha-beta sa 38.4 62 0.0021 27.3 6.2 37 8-44 4-51 (243)
175 3f67_A Putative dienelactone h 38.3 45 0.0015 27.3 5.4 38 7-44 31-68 (241)
176 3eag_A UDP-N-acetylmuramate:L- 38.1 30 0.001 30.9 4.3 34 7-44 4-37 (326)
177 1u0t_A Inorganic polyphosphate 37.8 15 0.00052 32.6 2.3 31 355-387 73-107 (307)
178 3s40_A Diacylglycerol kinase; 37.8 93 0.0032 27.3 7.5 81 282-388 12-98 (304)
179 3p9x_A Phosphoribosylglycinami 37.4 1.7E+02 0.006 24.1 11.0 107 8-147 3-112 (211)
180 1ehi_A LMDDL2, D-alanine:D-lac 37.1 33 0.0011 31.4 4.6 39 6-44 2-45 (377)
181 3nhm_A Response regulator; pro 36.8 69 0.0024 23.2 5.8 40 106-147 38-86 (133)
182 3a10_A Response regulator; pho 36.7 80 0.0028 22.1 6.0 39 107-147 37-82 (116)
183 2r6j_A Eugenol synthase 1; phe 36.5 42 0.0014 29.5 5.1 33 9-45 13-45 (318)
184 3ucx_A Short chain dehydrogena 36.3 1.6E+02 0.0054 24.9 8.7 56 8-68 11-66 (264)
185 2hy5_A Putative sulfurtransfer 36.1 51 0.0017 24.7 4.8 36 11-46 5-43 (130)
186 2fb6_A Conserved hypothetical 36.1 34 0.0012 25.3 3.6 38 8-45 8-49 (117)
187 2wm1_A 2-amino-3-carboxymucona 36.0 38 0.0013 30.2 4.7 71 233-318 104-177 (336)
188 2vpq_A Acetyl-COA carboxylase; 35.9 1.4E+02 0.0049 27.7 9.0 33 8-45 2-34 (451)
189 1cyd_A Carbonyl reductase; sho 35.8 52 0.0018 27.5 5.4 40 1-44 1-40 (244)
190 2dwc_A PH0318, 433AA long hypo 35.8 2.6E+02 0.009 25.7 11.0 35 7-46 19-53 (433)
191 2pd6_A Estradiol 17-beta-dehyd 35.7 57 0.002 27.6 5.7 40 1-44 1-40 (264)
192 2a33_A Hypothetical protein; s 35.6 1.2E+02 0.0043 25.0 7.4 45 343-387 93-147 (215)
193 3goc_A Endonuclease V; alpha-b 35.6 63 0.0021 27.3 5.5 42 104-145 94-142 (237)
194 3tjr_A Short chain dehydrogena 35.5 1.5E+02 0.0053 25.7 8.6 34 8-44 31-64 (301)
195 2jah_A Clavulanic acid dehydro 35.4 1.8E+02 0.0062 24.2 8.8 33 9-44 8-40 (247)
196 1zgz_A Torcad operon transcrip 35.3 66 0.0023 22.9 5.3 42 106-149 37-84 (122)
197 2iz6_A Molybdenum cofactor car 35.1 26 0.00089 28.2 3.1 45 343-388 91-140 (176)
198 1pno_A NAD(P) transhydrogenase 35.1 44 0.0015 26.4 4.1 38 7-44 23-63 (180)
199 1zem_A Xylitol dehydrogenase; 35.0 1.8E+02 0.006 24.5 8.8 40 1-44 1-40 (262)
200 3ghy_A Ketopantoate reductase 34.9 19 0.00065 32.4 2.5 33 7-44 3-35 (335)
201 3icc_A Putative 3-oxoacyl-(acy 34.8 2E+02 0.0067 23.9 11.8 35 7-44 6-40 (255)
202 3dff_A Teicoplanin pseudoaglyc 34.7 41 0.0014 29.2 4.6 42 101-144 134-185 (273)
203 3grc_A Sensor protein, kinase; 34.6 64 0.0022 23.7 5.3 41 106-148 41-90 (140)
204 2xw6_A MGS, methylglyoxal synt 34.5 52 0.0018 25.0 4.4 95 8-143 4-110 (134)
205 1d4o_A NADP(H) transhydrogenas 34.5 45 0.0015 26.4 4.1 37 8-44 23-62 (184)
206 3ksu_A 3-oxoacyl-acyl carrier 34.4 91 0.0031 26.5 6.8 45 8-55 11-56 (262)
207 4eg0_A D-alanine--D-alanine li 34.3 57 0.0019 28.8 5.6 38 7-44 13-54 (317)
208 2l2q_A PTS system, cellobiose- 34.3 50 0.0017 23.9 4.3 37 7-43 4-40 (109)
209 1hjr_A Holliday junction resol 34.1 57 0.0019 25.6 4.8 46 101-148 45-105 (158)
210 3zzm_A Bifunctional purine bio 33.9 88 0.003 29.7 6.7 106 5-128 7-113 (523)
211 3oid_A Enoyl-[acyl-carrier-pro 33.9 1.3E+02 0.0043 25.5 7.6 34 8-44 4-37 (258)
212 1tmy_A CHEY protein, TMY; chem 33.8 61 0.0021 23.0 4.9 40 108-149 40-86 (120)
213 3s2u_A UDP-N-acetylglucosamine 33.8 66 0.0022 29.1 6.0 27 357-385 92-121 (365)
214 2r6a_A DNAB helicase, replicat 33.4 3E+02 0.01 25.6 10.8 43 8-50 204-247 (454)
215 3l6d_A Putative oxidoreductase 33.3 22 0.00074 31.5 2.6 37 1-42 3-39 (306)
216 1jx7_A Hypothetical protein YC 33.2 72 0.0025 23.0 5.2 30 18-47 15-46 (117)
217 1zi8_A Carboxymethylenebutenol 33.0 62 0.0021 26.3 5.4 38 7-44 27-64 (236)
218 2f62_A Nucleoside 2-deoxyribos 32.9 1.5E+02 0.005 23.3 7.1 86 280-386 10-105 (161)
219 3llv_A Exopolyphosphatase-rela 32.8 24 0.00082 26.7 2.5 33 7-44 6-38 (141)
220 3awd_A GOX2181, putative polyo 32.7 1.5E+02 0.0053 24.7 8.0 33 9-44 14-46 (260)
221 3afn_B Carbonyl reductase; alp 32.7 1.1E+02 0.0038 25.5 7.1 33 9-44 8-40 (258)
222 3rkr_A Short chain oxidoreduct 32.6 1.4E+02 0.0048 25.2 7.7 34 8-44 29-62 (262)
223 1q57_A DNA primase/helicase; d 32.5 1.9E+02 0.0066 27.4 9.4 42 9-50 244-286 (503)
224 3hv2_A Response regulator/HD d 32.5 61 0.0021 24.4 4.9 42 106-149 49-97 (153)
225 3b2n_A Uncharacterized protein 32.4 64 0.0022 23.6 4.9 42 106-149 40-88 (133)
226 4e5s_A MCCFLIKE protein (BA_56 32.3 58 0.002 29.2 5.2 74 293-388 62-137 (331)
227 4e7p_A Response regulator; DNA 32.2 68 0.0023 24.1 5.1 42 106-149 57-105 (150)
228 3kjh_A CO dehydrogenase/acetyl 31.9 26 0.00087 29.5 2.7 38 8-45 1-38 (254)
229 1ydh_A AT5G11950; structural g 31.9 49 0.0017 27.6 4.3 44 343-387 89-143 (216)
230 4imr_A 3-oxoacyl-(acyl-carrier 31.9 2.4E+02 0.0082 24.0 9.9 33 8-43 33-65 (275)
231 1xhf_A DYE resistance, aerobic 31.8 84 0.0029 22.3 5.4 41 107-149 39-85 (123)
232 1lss_A TRK system potassium up 31.8 37 0.0013 25.3 3.4 33 7-44 4-36 (140)
233 1nff_A Putative oxidoreductase 31.7 69 0.0024 27.2 5.5 40 1-44 1-40 (260)
234 4dll_A 2-hydroxy-3-oxopropiona 31.7 53 0.0018 29.1 4.9 33 6-43 30-62 (320)
235 2pl1_A Transcriptional regulat 31.6 1.1E+02 0.0036 21.6 6.0 42 106-149 35-83 (121)
236 2vrn_A Protease I, DR1199; cys 31.5 1.1E+02 0.0038 24.3 6.5 39 5-44 7-45 (190)
237 2fsv_C NAD(P) transhydrogenase 31.5 52 0.0018 26.6 4.1 37 8-44 47-86 (203)
238 1wma_A Carbonyl reductase [NAD 31.4 1.6E+02 0.0054 24.8 7.9 34 8-44 4-38 (276)
239 2a9o_A Response regulator; ess 31.2 79 0.0027 22.3 5.2 39 109-149 39-83 (120)
240 3kht_A Response regulator; PSI 31.1 88 0.003 23.1 5.6 41 106-148 42-91 (144)
241 2d1p_A TUSD, hypothetical UPF0 31.0 95 0.0033 23.7 5.6 37 10-46 16-55 (140)
242 3end_A Light-independent proto 31.0 55 0.0019 28.7 4.9 40 6-45 40-79 (307)
243 1djl_A Transhydrogenase DIII; 30.9 54 0.0018 26.6 4.1 37 8-44 46-85 (207)
244 3pfb_A Cinnamoyl esterase; alp 30.9 79 0.0027 26.3 5.8 37 8-44 46-84 (270)
245 1xfi_A Unknown protein; struct 30.7 46 0.0016 30.3 4.3 36 7-42 212-248 (367)
246 1e4e_A Vancomycin/teicoplanin 30.6 30 0.001 31.1 3.1 39 6-44 2-44 (343)
247 1srr_A SPO0F, sporulation resp 30.6 62 0.0021 23.2 4.5 38 109-148 41-85 (124)
248 1uqt_A Alpha, alpha-trehalose- 30.4 27 0.00092 33.3 2.8 75 343-429 333-420 (482)
249 3hn2_A 2-dehydropantoate 2-red 30.4 51 0.0017 29.1 4.5 32 8-44 3-34 (312)
250 3ioy_A Short-chain dehydrogena 30.4 2.1E+02 0.0071 25.1 8.7 34 8-44 8-41 (319)
251 4hcj_A THIJ/PFPI domain protei 30.4 42 0.0015 26.9 3.6 36 9-45 10-45 (177)
252 3i42_A Response regulator rece 30.3 72 0.0025 22.9 4.8 40 106-147 38-86 (127)
253 3l3b_A ES1 family protein; ssg 30.1 1.1E+02 0.0038 25.9 6.4 38 7-45 23-65 (242)
254 3sty_A Methylketone synthase 1 30.0 56 0.0019 27.1 4.7 37 8-44 12-48 (267)
255 2qxy_A Response regulator; reg 30.0 65 0.0022 23.8 4.6 40 106-148 39-85 (142)
256 3ius_A Uncharacterized conserv 30.0 44 0.0015 28.7 4.0 33 7-44 5-37 (286)
257 4f0j_A Probable hydrolytic enz 29.9 65 0.0022 27.4 5.2 37 8-44 46-82 (315)
258 3r6d_A NAD-dependent epimerase 29.8 63 0.0022 26.4 4.8 34 8-44 5-39 (221)
259 3i83_A 2-dehydropantoate 2-red 29.7 74 0.0025 28.1 5.5 33 8-45 3-35 (320)
260 3crn_A Response regulator rece 29.6 87 0.003 22.8 5.2 40 107-148 39-85 (132)
261 2rh8_A Anthocyanidin reductase 29.6 49 0.0017 29.3 4.3 30 11-43 12-41 (338)
262 1dhr_A Dihydropteridine reduct 29.5 56 0.0019 27.4 4.5 34 8-44 7-40 (241)
263 2hy5_B Intracellular sulfur ox 29.5 54 0.0018 24.9 3.9 38 10-47 9-48 (136)
264 2ew8_A (S)-1-phenylethanol deh 29.5 76 0.0026 26.7 5.4 40 1-44 1-40 (249)
265 3l77_A Short-chain alcohol deh 29.4 1.7E+02 0.006 23.9 7.7 33 9-44 3-35 (235)
266 3ip0_A 2-amino-4-hydroxy-6-hyd 29.4 53 0.0018 25.8 3.9 28 282-309 2-29 (158)
267 4ao6_A Esterase; hydrolase, th 29.3 57 0.002 27.6 4.6 39 6-44 54-94 (259)
268 3dkr_A Esterase D; alpha beta 29.3 59 0.002 26.5 4.6 37 8-44 22-58 (251)
269 1bg6_A N-(1-D-carboxylethyl)-L 29.3 35 0.0012 30.7 3.3 32 7-43 4-35 (359)
270 3h1g_A Chemotaxis protein CHEY 29.1 1.1E+02 0.0039 22.0 5.8 33 116-148 50-91 (129)
271 2wtm_A EST1E; hydrolase; 1.60A 29.1 80 0.0028 26.2 5.5 37 8-44 27-65 (251)
272 4ep4_A Crossover junction endo 29.1 1.1E+02 0.0036 24.3 5.6 49 98-148 46-109 (166)
273 2qzj_A Two-component response 29.0 71 0.0024 23.5 4.6 41 106-148 39-85 (136)
274 3imf_A Short chain dehydrogena 29.0 2.2E+02 0.0077 23.8 8.4 33 8-43 6-38 (257)
275 3qrx_B Melittin; calcium-bindi 29.0 12 0.00043 18.6 0.1 17 368-384 1-17 (26)
276 3ot1_A 4-methyl-5(B-hydroxyeth 29.0 83 0.0028 25.7 5.3 37 7-44 9-45 (208)
277 3cg0_A Response regulator rece 28.9 81 0.0028 23.1 5.0 42 106-149 45-93 (140)
278 2pju_A Propionate catabolism o 28.9 1.5E+02 0.005 24.8 6.8 33 109-146 148-180 (225)
279 1y1p_A ARII, aldehyde reductas 28.9 81 0.0028 27.7 5.7 35 6-44 10-44 (342)
280 1rcu_A Conserved hypothetical 28.8 47 0.0016 27.2 3.6 97 268-387 48-150 (195)
281 4e08_A DJ-1 beta; flavodoxin-l 28.8 91 0.0031 25.0 5.5 38 7-45 5-42 (190)
282 2a5l_A Trp repressor binding p 28.7 78 0.0027 25.4 5.2 39 6-44 4-43 (200)
283 3cz5_A Two-component response 28.7 1.1E+02 0.0037 22.9 5.8 41 106-148 42-89 (153)
284 2q62_A ARSH; alpha/beta, flavo 28.7 83 0.0028 26.7 5.4 40 5-44 32-74 (247)
285 3edm_A Short chain dehydrogena 28.5 2.3E+02 0.0079 23.8 8.4 35 7-44 7-41 (259)
286 2w70_A Biotin carboxylase; lig 28.5 2.2E+02 0.0075 26.4 8.9 32 8-44 3-34 (449)
287 2gdz_A NAD+-dependent 15-hydro 28.4 71 0.0024 27.2 5.1 34 8-44 7-40 (267)
288 1b93_A Protein (methylglyoxal 28.3 1.7E+02 0.0059 22.6 6.6 95 8-143 12-118 (152)
289 3hwr_A 2-dehydropantoate 2-red 28.2 33 0.0011 30.5 2.9 31 6-41 18-48 (318)
290 4fbl_A LIPS lipolytic enzyme; 28.2 43 0.0015 28.7 3.6 34 11-44 54-87 (281)
291 2a33_A Hypothetical protein; s 28.2 86 0.0029 26.0 5.2 37 7-43 13-53 (215)
292 2bru_C NAD(P) transhydrogenase 28.1 50 0.0017 26.1 3.4 37 8-44 31-70 (186)
293 3dfu_A Uncharacterized protein 28.1 46 0.0016 28.1 3.6 33 6-43 5-37 (232)
294 2r85_A PURP protein PF1517; AT 28.1 51 0.0017 29.2 4.2 33 7-45 2-34 (334)
295 1mb3_A Cell division response 28.0 67 0.0023 22.9 4.3 37 109-147 39-84 (124)
296 3lou_A Formyltetrahydrofolate 28.0 3E+02 0.01 23.9 10.8 107 5-147 93-202 (292)
297 2i87_A D-alanine-D-alanine lig 28.0 29 0.00098 31.6 2.5 39 6-44 2-44 (364)
298 3i1j_A Oxidoreductase, short c 28.0 2.5E+02 0.0087 23.1 8.6 35 7-44 13-47 (247)
299 3foj_A Uncharacterized protein 27.9 1.1E+02 0.0038 21.2 5.3 32 7-42 56-87 (100)
300 3cu5_A Two component transcrip 27.8 84 0.0029 23.3 4.9 37 108-146 42-85 (141)
301 3osu_A 3-oxoacyl-[acyl-carrier 27.7 2.3E+02 0.008 23.4 8.2 34 8-44 4-37 (246)
302 3bbn_B Ribosomal protein S2; s 27.7 2.7E+02 0.0092 23.3 9.5 30 116-145 156-187 (231)
303 3o26_A Salutaridine reductase; 27.6 2.1E+02 0.007 24.6 8.1 35 7-44 11-45 (311)
304 3r3s_A Oxidoreductase; structu 27.6 1.6E+02 0.0055 25.4 7.3 34 8-44 49-82 (294)
305 1imj_A CIB, CCG1-interacting f 27.6 1E+02 0.0036 24.3 5.8 38 7-44 31-70 (210)
306 3jte_A Response regulator rece 27.6 1E+02 0.0034 22.7 5.3 34 116-149 48-88 (143)
307 3t7c_A Carveol dehydrogenase; 27.5 2.9E+02 0.0099 23.8 9.0 33 8-43 28-60 (299)
308 2qr3_A Two-component system re 27.5 93 0.0032 22.7 5.1 42 106-149 38-91 (140)
309 3f6r_A Flavodoxin; FMN binding 27.3 69 0.0024 24.3 4.3 36 9-44 3-39 (148)
310 2dpo_A L-gulonate 3-dehydrogen 27.2 35 0.0012 30.4 2.8 35 5-44 4-38 (319)
311 3fwz_A Inner membrane protein 27.2 35 0.0012 25.8 2.5 33 7-44 7-39 (140)
312 3ga2_A Endonuclease V; alpha-b 27.1 79 0.0027 26.8 4.7 41 104-144 96-143 (246)
313 1f9y_A HPPK, protein (6-hydrox 27.0 62 0.0021 25.4 3.9 28 282-309 2-29 (158)
314 3enk_A UDP-glucose 4-epimerase 26.9 61 0.0021 28.7 4.5 31 10-43 7-37 (341)
315 3lte_A Response regulator; str 26.9 1.1E+02 0.0039 21.9 5.5 40 106-147 41-88 (132)
316 3pe6_A Monoglyceride lipase; a 26.9 75 0.0026 26.7 5.0 38 7-44 41-78 (303)
317 2rdm_A Response regulator rece 26.9 1.2E+02 0.004 21.8 5.5 41 106-148 40-89 (132)
318 1gee_A Glucose 1-dehydrogenase 26.9 1.8E+02 0.0063 24.2 7.5 32 9-43 8-39 (261)
319 2ew2_A 2-dehydropantoate 2-red 26.8 40 0.0014 29.6 3.2 32 7-43 3-34 (316)
320 1o97_C Electron transferring f 26.8 76 0.0026 27.3 4.8 41 104-146 101-147 (264)
321 3uve_A Carveol dehydrogenase ( 26.8 2.1E+02 0.0071 24.4 7.9 33 8-43 11-43 (286)
322 3rpe_A MDAB, modulator of drug 26.8 80 0.0027 26.3 4.8 42 3-44 21-69 (218)
323 2xj4_A MIPZ; replication, cell 26.8 71 0.0024 27.6 4.8 38 8-45 4-43 (286)
324 1jbe_A Chemotaxis protein CHEY 26.8 1.1E+02 0.0038 21.8 5.4 40 107-148 41-89 (128)
325 2rk3_A Protein DJ-1; parkinson 26.7 1E+02 0.0036 24.7 5.6 37 7-44 3-39 (197)
326 2qx0_A 7,8-dihydro-6-hydroxyme 26.7 85 0.0029 24.6 4.6 28 282-309 3-30 (159)
327 4fn4_A Short chain dehydrogena 26.7 2.2E+02 0.0075 24.2 7.7 55 8-67 7-61 (254)
328 1p6q_A CHEY2; chemotaxis, sign 26.7 82 0.0028 22.6 4.6 39 107-147 43-90 (129)
329 3l18_A Intracellular protease 26.7 1.1E+02 0.0038 23.7 5.6 38 7-45 2-39 (168)
330 3cfy_A Putative LUXO repressor 26.6 82 0.0028 23.2 4.6 39 108-148 41-86 (137)
331 3cg4_A Response regulator rece 26.6 1.1E+02 0.0039 22.3 5.5 38 1-42 1-38 (142)
332 3gk3_A Acetoacetyl-COA reducta 26.6 1.9E+02 0.0066 24.4 7.6 35 7-44 24-58 (269)
333 1f0y_A HCDH, L-3-hydroxyacyl-C 26.6 39 0.0013 29.7 3.0 33 7-44 15-47 (302)
334 3c97_A Signal transduction his 26.5 1.3E+02 0.0045 21.9 5.9 38 107-146 46-95 (140)
335 3eul_A Possible nitrate/nitrit 26.5 75 0.0026 23.8 4.5 41 106-148 52-99 (152)
336 4hb9_A Similarities with proba 26.5 41 0.0014 30.7 3.3 29 8-41 2-30 (412)
337 1ybh_A Acetolactate synthase, 26.4 1.8E+02 0.0063 28.2 8.2 79 297-386 14-108 (590)
338 2jk1_A HUPR, hydrogenase trans 26.4 90 0.0031 22.9 4.8 41 106-148 35-82 (139)
339 4gbj_A 6-phosphogluconate dehy 26.3 61 0.0021 28.4 4.2 30 8-42 6-35 (297)
340 3rqi_A Response regulator prot 26.3 59 0.002 25.7 3.9 42 106-149 42-90 (184)
341 3tox_A Short chain dehydrogena 26.2 1.4E+02 0.0047 25.7 6.5 32 8-42 8-39 (280)
342 4h1h_A LMO1638 protein; MCCF-l 26.1 82 0.0028 28.1 5.1 73 293-387 62-136 (327)
343 4gi5_A Quinone reductase; prot 26.1 1.2E+02 0.004 26.4 5.9 39 5-43 20-61 (280)
344 3v8b_A Putative dehydrogenase, 26.1 2.4E+02 0.0081 24.1 8.1 33 8-43 28-60 (283)
345 3s55_A Putative short-chain de 26.0 2.6E+02 0.009 23.7 8.4 34 8-44 10-43 (281)
346 3qit_A CURM TE, polyketide syn 25.9 76 0.0026 26.3 4.8 36 9-44 27-62 (286)
347 1z82_A Glycerol-3-phosphate de 25.8 44 0.0015 29.8 3.3 34 6-44 13-46 (335)
348 2etv_A Iron(III) ABC transport 25.7 60 0.002 29.1 4.2 37 106-145 88-125 (346)
349 3u9t_A MCC alpha, methylcroton 25.7 2E+02 0.007 28.6 8.3 37 6-47 27-63 (675)
350 3n53_A Response regulator rece 25.6 64 0.0022 23.8 3.8 40 106-147 37-85 (140)
351 3pxx_A Carveol dehydrogenase; 25.6 2.6E+02 0.0089 23.7 8.3 34 8-44 10-43 (287)
352 2j48_A Two-component sensor ki 25.6 1E+02 0.0035 21.4 4.8 39 107-147 37-84 (119)
353 3hzh_A Chemotaxis response reg 25.5 90 0.0031 23.6 4.8 42 105-148 71-121 (157)
354 1yio_A Response regulatory pro 25.5 79 0.0027 25.4 4.6 38 108-147 41-85 (208)
355 2wm8_A MDP-1, magnesium-depend 25.4 2.4E+02 0.0083 22.0 7.7 91 24-146 73-165 (187)
356 3lzw_A Ferredoxin--NADP reduct 25.4 21 0.00072 31.5 1.0 40 1-45 1-40 (332)
357 3e5n_A D-alanine-D-alanine lig 25.3 42 0.0014 30.8 3.1 41 4-44 19-63 (386)
358 3eme_A Rhodanese-like domain p 25.3 1.1E+02 0.0037 21.4 4.8 32 7-42 56-87 (103)
359 3f5d_A Protein YDEA; unknow pr 25.2 64 0.0022 26.5 3.9 39 7-46 3-42 (206)
360 4fu0_A D-alanine--D-alanine li 25.2 43 0.0015 30.3 3.1 38 5-42 1-42 (357)
361 1xx6_A Thymidine kinase; NESG, 25.2 1.1E+02 0.0037 24.7 5.3 41 4-44 4-45 (191)
362 2qh9_A UPF0215 protein AF_1433 25.2 1.1E+02 0.0038 24.6 5.2 40 106-145 51-98 (184)
363 1kgs_A DRRD, DNA binding respo 25.1 1.1E+02 0.0038 24.8 5.6 41 107-149 38-85 (225)
364 3rg8_A Phosphoribosylaminoimid 25.1 1.4E+02 0.0049 23.3 5.5 49 8-57 3-53 (159)
365 2dkn_A 3-alpha-hydroxysteroid 25.1 69 0.0024 26.8 4.3 31 10-43 3-33 (255)
366 1u7z_A Coenzyme A biosynthesis 25.1 57 0.002 27.4 3.6 25 18-44 33-57 (226)
367 1efv_B Electron transfer flavo 25.0 87 0.003 26.8 4.8 41 104-146 105-151 (255)
368 1iow_A DD-ligase, DDLB, D-ALA\ 24.9 1.3E+02 0.0044 26.0 6.2 38 7-44 2-43 (306)
369 3dhn_A NAD-dependent epimerase 24.9 51 0.0018 27.1 3.4 33 8-44 5-37 (227)
370 1fy2_A Aspartyl dipeptidase; s 24.7 1.2E+02 0.0041 25.3 5.6 46 267-314 21-66 (229)
371 3dm5_A SRP54, signal recogniti 24.7 1.5E+02 0.005 27.8 6.6 43 7-49 100-142 (443)
372 1qkk_A DCTD, C4-dicarboxylate 24.7 81 0.0028 23.7 4.3 41 107-149 39-86 (155)
373 3afo_A NADH kinase POS5; alpha 24.6 37 0.0013 31.2 2.5 34 352-387 109-147 (388)
374 3aek_B Light-independent proto 24.5 46 0.0016 32.1 3.2 34 106-144 340-373 (525)
375 3hdv_A Response regulator; PSI 24.4 1.1E+02 0.0038 22.2 5.0 39 1-43 1-39 (136)
376 2xdq_B Light-independent proto 24.4 45 0.0016 32.0 3.2 34 106-144 363-396 (511)
377 3sbx_A Putative uncharacterize 24.3 1.4E+02 0.0046 24.2 5.6 35 7-42 13-51 (189)
378 3qxc_A Dethiobiotin synthetase 24.1 96 0.0033 26.2 4.9 44 104-147 118-170 (242)
379 3trh_A Phosphoribosylaminoimid 24.1 1.6E+02 0.0053 23.4 5.6 53 5-58 4-58 (169)
380 2b69_A UDP-glucuronate decarbo 23.9 86 0.003 27.7 4.9 34 6-43 26-59 (343)
381 3bfv_A CAPA1, CAPB2, membrane 23.9 1.2E+02 0.0041 26.0 5.6 40 7-46 81-122 (271)
382 3t5t_A Putative glycosyltransf 23.8 23 0.00077 33.9 0.9 76 342-429 353-439 (496)
383 2qv0_A Protein MRKE; structura 23.8 1.4E+02 0.0049 21.7 5.6 30 106-137 46-77 (143)
384 2pnf_A 3-oxoacyl-[acyl-carrier 23.8 98 0.0034 25.7 5.0 33 9-44 8-40 (248)
385 4b4t_W RPN10, 26S proteasome r 23.7 2.7E+02 0.0091 24.0 7.6 62 9-70 110-175 (268)
386 2fx5_A Lipase; alpha-beta hydr 23.6 71 0.0024 26.7 4.1 38 7-44 48-85 (258)
387 3hh1_A Tetrapyrrole methylase 23.6 61 0.0021 23.7 3.2 13 30-42 74-86 (117)
388 3lyl_A 3-oxoacyl-(acyl-carrier 23.6 1.8E+02 0.0062 24.0 6.7 33 9-44 6-38 (247)
389 3obb_A Probable 3-hydroxyisobu 23.6 83 0.0029 27.6 4.6 30 8-42 4-33 (300)
390 3pnx_A Putative sulfurtransfer 23.6 1E+02 0.0035 24.2 4.6 43 9-51 7-49 (160)
391 3q9s_A DNA-binding response re 23.6 1.1E+02 0.0039 25.6 5.4 41 106-148 72-118 (249)
392 1cp2_A CP2, nitrogenase iron p 23.5 79 0.0027 26.9 4.4 36 9-44 3-38 (269)
393 3of5_A Dethiobiotin synthetase 23.5 99 0.0034 25.8 4.9 35 8-42 5-40 (228)
394 3kkj_A Amine oxidase, flavin-c 23.4 44 0.0015 28.0 2.8 18 25-42 15-32 (336)
395 3qbc_A 2-amino-4-hydroxy-6-hyd 23.4 77 0.0026 24.9 3.8 27 282-308 6-32 (161)
396 2khz_A C-MYC-responsive protei 23.4 46 0.0016 26.3 2.6 73 353-427 73-150 (165)
397 1d1q_A Tyrosine phosphatase (E 23.4 1.2E+02 0.0041 23.7 5.0 35 1-35 1-36 (161)
398 2pn1_A Carbamoylphosphate synt 23.4 1E+02 0.0034 27.2 5.2 34 5-44 2-37 (331)
399 1fjh_A 3alpha-hydroxysteroid d 23.4 80 0.0027 26.5 4.4 32 9-43 2-33 (257)
400 1byi_A Dethiobiotin synthase; 23.3 88 0.003 25.6 4.6 33 10-42 4-37 (224)
401 2hbv_A 2-amino-3-carboxymucona 23.3 1.2E+02 0.0042 26.7 5.8 50 268-318 131-180 (334)
402 4hn9_A Iron complex transport 23.3 54 0.0018 29.2 3.4 38 106-146 108-145 (335)
403 3lq1_A 2-succinyl-5-enolpyruvy 23.1 2.3E+02 0.0078 27.5 8.1 29 356-386 73-107 (578)
404 1cbk_A Protein (7,8-dihydro-6- 23.1 81 0.0028 24.8 3.9 27 282-308 3-29 (160)
405 1efp_B ETF, protein (electron 22.9 88 0.003 26.7 4.4 40 105-146 103-148 (252)
406 4dmm_A 3-oxoacyl-[acyl-carrier 22.9 3.4E+02 0.012 22.8 8.5 33 8-43 28-60 (269)
407 3d3w_A L-xylulose reductase; u 22.9 1.3E+02 0.0045 24.8 5.7 33 9-44 8-40 (244)
408 3ic5_A Putative saccharopine d 22.9 63 0.0022 23.0 3.2 33 7-44 5-38 (118)
409 1gsa_A Glutathione synthetase; 22.8 77 0.0026 27.6 4.3 37 8-44 2-41 (316)
410 3psh_A Protein HI_1472; substr 22.8 74 0.0025 28.1 4.2 38 106-146 76-114 (326)
411 3qiv_A Short-chain dehydrogena 22.8 1.7E+02 0.0059 24.3 6.5 33 8-43 9-41 (253)
412 2wyu_A Enoyl-[acyl carrier pro 22.8 78 0.0027 26.8 4.2 35 8-44 8-43 (261)
413 1ydh_A AT5G11950; structural g 22.7 1.3E+02 0.0044 25.0 5.3 37 7-43 9-49 (216)
414 3gi1_A LBP, laminin-binding pr 22.6 3.6E+02 0.012 23.2 8.5 39 104-144 217-257 (286)
415 3f6c_A Positive transcription 22.6 70 0.0024 23.2 3.5 38 109-148 40-84 (134)
416 3md9_A Hemin-binding periplasm 22.5 67 0.0023 27.1 3.7 37 106-145 51-89 (255)
417 1oi4_A Hypothetical protein YH 22.5 1.8E+02 0.0063 23.2 6.3 38 7-45 23-60 (193)
418 2c5m_A CTP synthase; cytidine 22.5 77 0.0026 27.2 3.7 40 7-46 22-64 (294)
419 3sxp_A ADP-L-glycero-D-mannohe 22.5 1.2E+02 0.004 27.1 5.6 36 5-44 8-45 (362)
420 2ffj_A Conserved hypothetical 22.5 98 0.0034 27.2 4.8 34 8-42 165-198 (300)
421 2z1m_A GDP-D-mannose dehydrata 22.4 85 0.0029 27.6 4.6 33 8-44 4-36 (345)
422 3u5t_A 3-oxoacyl-[acyl-carrier 22.4 2.3E+02 0.008 23.9 7.2 34 7-43 26-59 (267)
423 2zay_A Response regulator rece 22.4 93 0.0032 23.0 4.2 42 106-149 43-93 (147)
424 2afh_E Nitrogenase iron protei 22.3 97 0.0033 26.7 4.8 38 8-45 3-40 (289)
425 2d1p_B TUSC, hypothetical UPF0 22.3 1.6E+02 0.0054 21.5 5.3 38 10-47 5-44 (119)
426 3sr3_A Microcin immunity prote 22.3 1.1E+02 0.0036 27.5 5.0 73 293-387 63-137 (336)
427 4egb_A DTDP-glucose 4,6-dehydr 22.2 3.8E+02 0.013 23.3 9.0 32 7-42 24-57 (346)
428 1zl0_A Hypothetical protein PA 22.1 1.3E+02 0.0045 26.6 5.5 75 292-388 63-139 (311)
429 3u9l_A 3-oxoacyl-[acyl-carrier 22.0 2.3E+02 0.0077 25.0 7.2 31 9-42 6-36 (324)
430 2raf_A Putative dinucleotide-b 22.0 61 0.0021 26.6 3.2 34 6-44 18-51 (209)
431 3se7_A VANA; alpha-beta struct 22.0 53 0.0018 29.5 3.0 39 6-44 2-44 (346)
432 2l82_A Designed protein OR32; 21.9 1.6E+02 0.0055 21.0 4.8 35 282-320 3-37 (162)
433 3trd_A Alpha/beta hydrolase; c 21.8 1.5E+02 0.0051 23.4 5.6 38 7-44 30-72 (208)
434 1ulz_A Pyruvate carboxylase N- 21.7 2E+02 0.0068 26.7 7.1 33 8-45 3-35 (451)
435 3obi_A Formyltetrahydrofolate 21.6 3.8E+02 0.013 23.2 8.4 110 4-147 86-197 (288)
436 1ks9_A KPA reductase;, 2-dehyd 21.6 59 0.002 28.0 3.2 31 9-44 2-32 (291)
437 3m1a_A Putative dehydrogenase; 21.6 1E+02 0.0034 26.4 4.7 33 9-44 6-38 (281)
438 3rm3_A MGLP, thermostable mono 21.6 94 0.0032 25.8 4.5 37 8-44 40-76 (270)
439 2q8p_A Iron-regulated surface 21.5 60 0.002 27.5 3.2 38 106-146 52-90 (260)
440 2vqe_B 30S ribosomal protein S 21.5 69 0.0023 27.4 3.4 34 113-146 154-189 (256)
441 3q94_A Fructose-bisphosphate a 21.4 1.1E+02 0.0038 26.7 4.8 26 266-292 160-185 (288)
442 1mvo_A PHOP response regulator 21.4 1.3E+02 0.0046 21.6 4.9 37 109-147 41-84 (136)
443 4b4k_A N5-carboxyaminoimidazol 21.3 2E+02 0.0068 23.0 5.7 53 9-62 24-78 (181)
444 2q5c_A NTRC family transcripti 21.3 32 0.0011 28.1 1.3 29 358-389 52-80 (196)
445 3mm4_A Histidine kinase homolo 21.3 89 0.003 25.3 4.1 33 116-148 118-161 (206)
446 1u9c_A APC35852; structural ge 21.3 2E+02 0.0068 23.6 6.4 38 8-45 6-52 (224)
447 3nbm_A PTS system, lactose-spe 21.2 86 0.003 22.7 3.5 38 5-42 4-41 (108)
448 3eya_A Pyruvate dehydrogenase 21.2 1.8E+02 0.0062 27.9 6.9 28 357-386 66-99 (549)
449 3hww_A 2-succinyl-5-enolpyruvy 21.2 2.3E+02 0.0079 27.3 7.6 28 357-386 71-104 (556)
450 3fni_A Putative diflavin flavo 21.2 2.1E+02 0.0073 22.0 6.1 38 8-45 5-43 (159)
451 3ing_A Homoserine dehydrogenas 21.1 1.4E+02 0.0049 26.5 5.6 41 6-46 81-121 (325)
452 1wcv_1 SOJ, segregation protei 21.0 55 0.0019 27.8 2.8 39 8-46 7-46 (257)
453 2dtx_A Glucose 1-dehydrogenase 21.0 94 0.0032 26.4 4.3 33 9-44 9-41 (264)
454 3r1i_A Short-chain type dehydr 21.0 2E+02 0.0068 24.5 6.5 34 8-44 32-65 (276)
455 3r0j_A Possible two component 21.0 1.2E+02 0.0041 25.3 5.0 41 106-148 58-105 (250)
456 2pq6_A UDP-glucuronosyl/UDP-gl 20.9 1.4E+02 0.0047 28.2 5.9 38 7-44 294-333 (482)
457 3qua_A Putative uncharacterize 20.9 1.8E+02 0.0061 23.7 5.7 35 7-42 22-60 (199)
458 3k96_A Glycerol-3-phosphate de 20.9 51 0.0018 29.9 2.7 33 7-44 29-61 (356)
459 3u0b_A Oxidoreductase, short c 20.9 5.1E+02 0.017 24.1 9.7 43 8-53 213-255 (454)
460 3mcu_A Dipicolinate synthase, 20.8 79 0.0027 26.1 3.5 58 374-432 116-188 (207)
461 2xij_A Methylmalonyl-COA mutas 20.8 2.3E+02 0.0077 28.7 7.3 40 6-45 603-642 (762)
462 3hr8_A Protein RECA; alpha and 20.8 4.6E+02 0.016 23.5 10.4 39 9-47 63-101 (356)
463 1vi6_A 30S ribosomal protein S 20.7 89 0.003 25.8 3.8 31 116-146 114-146 (208)
464 2c29_D Dihydroflavonol 4-reduc 20.7 93 0.0032 27.4 4.4 31 10-43 7-37 (337)
465 3dqz_A Alpha-hydroxynitrIle ly 20.7 71 0.0024 26.3 3.5 35 10-44 6-40 (258)
466 1qyd_A Pinoresinol-lariciresin 20.6 80 0.0027 27.4 3.9 33 8-44 5-37 (313)
467 2fuk_A XC6422 protein; A/B hyd 20.6 1.5E+02 0.0051 23.6 5.4 37 8-44 37-78 (220)
468 1ozh_A ALS, acetolactate synth 20.6 2.2E+02 0.0074 27.5 7.3 28 357-386 73-106 (566)
469 3i12_A D-alanine-D-alanine lig 20.4 61 0.0021 29.4 3.1 39 6-44 2-44 (364)
470 2pju_A Propionate catabolism o 20.3 42 0.0014 28.2 1.8 29 358-389 64-92 (225)
471 3lf2_A Short chain oxidoreduct 20.3 1.3E+02 0.0046 25.4 5.2 35 7-44 7-41 (265)
472 1jfr_A Lipase; serine hydrolas 20.3 76 0.0026 26.5 3.6 38 7-44 53-90 (262)
473 1t9b_A Acetolactate synthase, 20.2 2.4E+02 0.0081 28.1 7.6 79 296-386 83-178 (677)
474 3oow_A Phosphoribosylaminoimid 20.2 2.5E+02 0.0085 22.1 6.0 53 8-61 6-60 (166)
475 3sx2_A Putative 3-ketoacyl-(ac 20.1 2.2E+02 0.0074 24.2 6.6 33 8-43 13-45 (278)
476 3is3_A 17BETA-hydroxysteroid d 20.1 3.9E+02 0.013 22.4 8.8 34 8-44 18-51 (270)
477 3doj_A AT3G25530, dehydrogenas 20.1 79 0.0027 27.8 3.7 34 6-44 20-53 (310)
478 1vmd_A MGS, methylglyoxal synt 20.1 2E+02 0.0069 23.0 5.6 95 8-143 28-134 (178)
479 3gvc_A Oxidoreductase, probabl 20.1 1.5E+02 0.0052 25.4 5.5 34 8-44 29-62 (277)
480 1qyc_A Phenylcoumaran benzylic 20.1 83 0.0029 27.2 3.9 33 8-44 5-37 (308)
481 2oqr_A Sensory transduction pr 20.1 1.2E+02 0.0043 24.6 4.9 41 108-150 41-87 (230)
482 2g8l_A 287AA long hypothetical 20.1 1.4E+02 0.0049 26.1 5.3 35 7-42 160-195 (299)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.3e-60 Score=456.73 Aligned_cols=394 Identities=25% Similarity=0.386 Sum_probs=308.7
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHG--AIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGC 82 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (433)
.++.||+++|+|++||++|++.||+.|++|| +.|||++++.+...+.+.. .....+++|+.++ +++|.+.
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ip-----dglp~~~ 82 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVH-----DGLPKGY 82 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECC-----CCCCTTC
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecC-----CCCCCCc
Confidence 3478999999999999999999999999999 9999999985544332210 0113469999987 3677665
Q ss_pred CCCCCCCCcc-HHHHHHHHH-HhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhc
Q 013951 83 ENCDLLPTTD-FARFMKSLH-MLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGV 160 (433)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~-~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (433)
+...+ ... +..+..+.. .+.+.+.+++++.+.++|+||+|.++.|+..+|+++|||++.++++++..+..+++++.
T Consensus 83 ~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 83 VSSGN--PREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp CCCSC--TTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cccCC--hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 54432 222 444444443 45556666665534689999999999999999999999999999999998887776542
Q ss_pred cccC-C--CCCCCCCcccCCCCCCCccccccccCccCCC---CcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHh
Q 013951 161 SKVH-E--NVTSDSEYFNIPGLPDHIEFTKVQLLISKRD---DDRKELREQILAADKKTYGAIINTFEELESPFIENYKK 234 (433)
Q Consensus 161 ~~~~-~--~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~ 234 (433)
.... . ..........+|+++. ++.++++.++.. ..+.+++.+..+...+.+++++||+++||+++++.++.
T Consensus 161 ~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~ 237 (454)
T 3hbf_A 161 IREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS 237 (454)
T ss_dssp HHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT
T ss_pred HHhhcCCCccccccccccCCCCCC---cChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh
Confidence 1111 0 0111122234888875 777888876652 22556666677777889999999999999998887776
Q ss_pred hcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEE
Q 013951 235 AKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVW 314 (433)
Q Consensus 235 ~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 314 (433)
.+ +++++|||++...... ....+.++.+||+.++++++|||||||+...+.+.+.+++.+|++.+++|||
T Consensus 238 ~~-~~v~~vGPl~~~~~~~---------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw 307 (454)
T 3hbf_A 238 KF-KLLLNVGPFNLTTPQR---------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIW 307 (454)
T ss_dssp TS-SCEEECCCHHHHSCCS---------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEE
T ss_pred cC-CCEEEECCcccccccc---------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEE
Confidence 55 6899999997643211 1113567999999998889999999999998889999999999999999999
Q ss_pred EEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEecccccccchh
Q 013951 315 VIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFADQFCN 394 (433)
Q Consensus 315 ~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~DQ~~n 394 (433)
+++..... . +|+++.++. .+|+++.+|+||.++|+|+++++||||||+||++||+++|||||++|+++||+.|
T Consensus 308 ~~~~~~~~----~--lp~~~~~~~-~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~N 380 (454)
T 3hbf_A 308 SFRGDPKE----K--LPKGFLERT-KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLN 380 (454)
T ss_dssp ECCSCHHH----H--SCTTHHHHT-TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EeCCcchh----c--CCHhHHhhc-CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHH
Confidence 99876421 1 777776554 4788888999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhh-ccceEEeeeeccCCcccccchhhccccc
Q 013951 395 EKLIVNV-LRIGVSVGVEVDLPITTSNYLCKISCNS 429 (433)
Q Consensus 395 a~~v~e~-~G~G~~l~~~~~~~~~l~~ai~~il~~~ 429 (433)
|++++ + +|+|+.++...++.+.++++|+++++++
T Consensus 381 a~~v~-~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~ 415 (454)
T 3hbf_A 381 TILTE-SVLEIGVGVDNGVLTKESIKKALELTMSSE 415 (454)
T ss_dssp HHHHH-TTSCSEEECGGGSCCHHHHHHHHHHHHSSH
T ss_pred HHHHH-HhhCeeEEecCCCCCHHHHHHHHHHHHCCC
Confidence 99995 7 5999999988899999999999999875
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=4.1e-56 Score=434.62 Aligned_cols=401 Identities=28% Similarity=0.431 Sum_probs=287.9
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEECCcc--hhhhHHHHHHhhhCCCCeEEEEecCCCccCC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQH-GAIVTIVTTPVN--AARFKTVIARAIKSGLQIRLIEIQFPWQEAG 77 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 77 (433)
|+. .+++||+++|+|++||++|+++||++|++| ||+|||++++.+ ...+++... ....+++|+.++...
T Consensus 1 M~~-~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~---- 72 (480)
T 2vch_A 1 MEE-SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVD---- 72 (480)
T ss_dssp ------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCC----
T ss_pred CCC-CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCC----
Confidence 544 345799999999999999999999999998 999999999874 333332110 013479999887431
Q ss_pred CCCCCCCCCCCCCcc-HHHHHHHHHHhHHHHHHHHHhC--CCCC-cEEEECCCCcchHHHHHHcCCCcEEEecchHHHHH
Q 013951 78 IPEGCENCDLLPTTD-FARFMKSLHMLQQPFENLFKEK--TLKP-CCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLF 153 (433)
Q Consensus 78 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~--~~~p-D~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~ 153 (433)
.+. . .. ... ...+......+.+.+.+++++. ..++ |+||+|.+..++..+|+++|||++.++++++..+.
T Consensus 73 ~~~-~---~~--~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~ 146 (480)
T 2vch_A 73 LTD-L---SS--STRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLS 146 (480)
T ss_dssp CTT-S---CT--TCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHH
T ss_pred CCC-C---CC--chhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHH
Confidence 111 0 11 112 2333344455667777777652 2478 99999999889999999999999999999988766
Q ss_pred HHhhhhccc--cCCCCCCCCCcccCCCCCCCccccccccCccCCCC--cHHHHHHHHHHhcccccEEEEcChhhcchHHH
Q 013951 154 CHHLLGVSK--VHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDD--DRKELREQILAADKKTYGAIINTFEELESPFI 229 (433)
Q Consensus 154 ~~~~~~~~~--~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~ 229 (433)
.+++++... ..........+..+|+++. +...+++..+... .....+....+..++..++++|++.++|+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~ 223 (480)
T 2vch_A 147 FFLHLPKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAI 223 (480)
T ss_dssp HHHHHHHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHH
T ss_pred HHHHHHHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHH
Confidence 555443111 0000000112234566654 3334444333221 23333334445566778899999999999877
Q ss_pred HHHHhhc--CCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHh
Q 013951 230 ENYKKAK--QGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEA 307 (433)
Q Consensus 230 ~~~~~~~--~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~ 307 (433)
..+.++. .+++++|||++...... . .+..+.++.+||+.++++++|||||||+...+.+.+.+++++|++
T Consensus 224 ~~l~~~~~~~~~v~~vGpl~~~~~~~-----~---~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~ 295 (480)
T 2vch_A 224 KALQEPGLDKPPVYPVGPLVNIGKQE-----A---KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLAD 295 (480)
T ss_dssp HHHHSCCTTCCCEEECCCCCCCSCSC-----C--------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhcccCCCcEEEEeccccccccc-----c---CccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHh
Confidence 7665421 26899999997643110 0 012467899999998878999999999998888999999999999
Q ss_pred CCCCEEEEEeCCcch-----------hhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHH
Q 013951 308 SNKPFVWVIRGVSKL-----------EALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGI 376 (433)
Q Consensus 308 ~~~~~i~~~~~~~~~-----------~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal 376 (433)
.+++|||+++..... .....+ +|+++.++....++++.+|+||.+||+|+++++||||||+||++||+
T Consensus 296 ~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal 374 (480)
T 2vch_A 296 SEQRFLWVIRSPSGIANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESV 374 (480)
T ss_dssp TTCEEEEEECCCCSSTTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHH
T ss_pred cCCcEEEEECCccccccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHH
Confidence 999999999864310 011111 78888888777778887899999999999999999999999999999
Q ss_pred HcCCcEEecccccccchhHHHhhhhccceEEeeee---ccCCcccccchhhccc
Q 013951 377 SAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVE---VDLPITTSNYLCKISC 427 (433)
Q Consensus 377 ~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~---~~~~~~l~~ai~~il~ 427 (433)
++|||||++|+++||+.||+++++++|+|+.++.. .++.+.|+++|+++++
T Consensus 375 ~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 375 VSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLME 428 (480)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHT
T ss_pred HcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhc
Confidence 99999999999999999999963599999999875 6899999999999998
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2.6e-56 Score=437.51 Aligned_cols=414 Identities=29% Similarity=0.497 Sum_probs=287.8
Q ss_pred CCCC-CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCC-CCeEEEEecCCCccCCC
Q 013951 1 MASE-ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSG-LQIRLIEIQFPWQEAGI 78 (433)
Q Consensus 1 m~~~-~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~ 78 (433)
|+.. ++++||+++|+|+.||++|++.||++|++|||+|||++++.+...+.+........+ .+++|+.++. ++
T Consensus 1 ~~~~~~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~-----~l 75 (482)
T 2pq6_A 1 MGNFANRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD-----GL 75 (482)
T ss_dssp -------CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC-----CC
T ss_pred CCcccCCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC-----CC
Confidence 4443 345799999999999999999999999999999999999976554433211100011 3689998872 34
Q ss_pred CCCCCCCCCCCCccHHHHHHHH-HHhHHHHHHHHHhC-----CCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHH
Q 013951 79 PEGCENCDLLPTTDFARFMKSL-HMLQQPFENLFKEK-----TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCL 152 (433)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~-----~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~ 152 (433)
+........ ...+..+.... ..+.+.++++++++ ..+||+||+|.++.|+..+|+++|||++.++++++...
T Consensus 76 p~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~ 153 (482)
T 2pq6_A 76 TPMEGDGDV--SQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSL 153 (482)
T ss_dssp C-----------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHH
T ss_pred CCcccccCc--chhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHH
Confidence 431000110 11233444444 45566667776642 25899999999999999999999999999999988766
Q ss_pred HHHhhhhcc---ccCCCCC-----C---CCCcccCCCCCCCccccccccCccCCC----CcHHHHHHHHHHhcccccEEE
Q 013951 153 FCHHLLGVS---KVHENVT-----S---DSEYFNIPGLPDHIEFTKVQLLISKRD----DDRKELREQILAADKKTYGAI 217 (433)
Q Consensus 153 ~~~~~~~~~---~~~~~~~-----~---~~~~~~~p~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 217 (433)
....+++.. ....... . ......+|+++. ++..+++.++.. ..+.+.+....+...+.+.++
T Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl 230 (482)
T 2pq6_A 154 LNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTIL 230 (482)
T ss_dssp HHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEE
T ss_pred HHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEE
Confidence 554433211 1111000 0 011113455543 334444444332 223444445556667888999
Q ss_pred EcChhhcchHHHHHHHhhcCCcEEEeCcCCCC-CCCCccccccC--CCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCC
Q 013951 218 INTFEELESPFIENYKKAKQGKVWCIGPASLC-NKEPIDKAERG--KTASIDVPECLTWLDSQQPSSVVYVCLGSICNLP 294 (433)
Q Consensus 218 ~~s~~~l~~~~~~~~~~~~~~~~~~vGpl~~~-~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~ 294 (433)
+|++++||+++++.++..+ +++++|||++.. +........+. ...+..+.++.+|++.++++++|||||||+...+
T Consensus 231 ~nt~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~ 309 (482)
T 2pq6_A 231 LNTFNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMT 309 (482)
T ss_dssp ESSCGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCC
T ss_pred EcChHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCC
Confidence 9999999999888887777 789999999753 11100000000 1112234568999999888889999999998888
Q ss_pred hhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHH
Q 013951 295 SSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLE 374 (433)
Q Consensus 295 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~e 374 (433)
.+.+.+++++|++.+++|||+++.....+.... +|+++.++. .+|+++.+|+||.++|+|+++++||||||+||++|
T Consensus 310 ~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~-~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~E 386 (482)
T 2pq6_A 310 PEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEI-ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTE 386 (482)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGG--SCHHHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcEEEEEcCCcccccccc--CcHhHHHhc-CCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHH
Confidence 888999999999999999999986421111111 566665554 57999999999999999999999999999999999
Q ss_pred HHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhccccc
Q 013951 375 GISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNS 429 (433)
Q Consensus 375 al~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~ 429 (433)
|+++|||||++|++.||+.||++++|++|+|+.++ .+++.+.++++|+++|+|+
T Consensus 387 al~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~~~ 440 (482)
T 2pq6_A 387 SICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGD 440 (482)
T ss_dssp HHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTSH
T ss_pred HHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHcCC
Confidence 99999999999999999999999943799999998 6789999999999999887
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=7e-55 Score=424.33 Aligned_cols=403 Identities=27% Similarity=0.408 Sum_probs=292.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcch-hhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNA-ARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEG 81 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (433)
++++||+++|+|++||++|++.||++|++| ||+|||++++.+. ..+.+.+.+......+++|+.++.. .++.
T Consensus 7 ~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~- 81 (463)
T 2acv_A 7 NKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP- 81 (463)
T ss_dssp HHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-
Confidence 356799999999999999999999999999 9999999998753 2223333332223357999998742 1221
Q ss_pred CCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhC-CCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhc
Q 013951 82 CENCDLLPTTDFARFMKSLHMLQQPFENLFKEK-TLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGV 160 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (433)
.+. ....+.. +......+.+.++++++++ ..+||+||+|.++.|+..+|+++|||++.++++++..+..+++++.
T Consensus 82 ~~~---~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 157 (463)
T 2acv_A 82 QEL---LKSPEFY-ILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN 157 (463)
T ss_dssp GGG---GGSHHHH-HHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGG
T ss_pred ccc---cCCccHH-HHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHh
Confidence 110 1112222 4455556667788887652 3689999999998899999999999999999999887766665543
Q ss_pred cccCCCCCCCCC---cccCCCC-CCCccccccccCccCCC-CcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHhh
Q 013951 161 SKVHENVTSDSE---YFNIPGL-PDHIEFTKVQLLISKRD-DDRKELREQILAADKKTYGAIINTFEELESPFIENYKKA 235 (433)
Q Consensus 161 ~~~~~~~~~~~~---~~~~p~l-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~ 235 (433)
......+..... ...+|++ +. +..++++..+.. ......+....+..++..++++|++.++|+...+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~ 234 (463)
T 2acv_A 158 RQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDH 234 (463)
T ss_dssp SCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHH
T ss_pred hcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhc
Confidence 221111111122 3456776 43 333343322211 113333333445557778899999999999887766654
Q ss_pred c--CCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCc-CCChhhHHHHHHHHHhCCCCE
Q 013951 236 K--QGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSIC-NLPSSQLIELGLGLEASNKPF 312 (433)
Q Consensus 236 ~--~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~ 312 (433)
. ++++++|||++....... .. ..+..+.++.+|++.++++++|||||||+. ..+.+.+.+++++|++.+++|
T Consensus 235 ~~p~~~v~~vGpl~~~~~~~~----~~-~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~ 309 (463)
T 2acv_A 235 DEKIPPIYAVGPLLDLKGQPN----PK-LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRF 309 (463)
T ss_dssp CTTSCCEEECCCCCCSSCCCB----TT-BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred cccCCcEEEeCCCcccccccc----cc-cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcE
Confidence 4 678999999976431000 00 001235689999999888899999999999 778888999999999999999
Q ss_pred EEEEeCCcchhhhhhhhchhhHHHHhC-CCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEeccccccc
Q 013951 313 VWVIRGVSKLEALEKWLVQENFEERIK-GRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFADQ 391 (433)
Q Consensus 313 i~~~~~~~~~~~~~~~~~p~~~~~~~~-~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~DQ 391 (433)
||+++.+.. . +|+++.++.. .+|+++.+|+||.++|+|+++++||||||+||++||+++|||||++|++.||
T Consensus 310 l~~~~~~~~-----~--l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ 382 (463)
T 2acv_A 310 LWSNSAEKK-----V--FPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQ 382 (463)
T ss_dssp EEECCCCGG-----G--SCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTH
T ss_pred EEEECCCcc-----c--CChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhh
Confidence 999987411 1 5666654431 4688888999999999999999999999999999999999999999999999
Q ss_pred chhHHHhhhhccceEEe-e---ee--ccCCcccccchhhcccc-ccc
Q 013951 392 FCNEKLIVNVLRIGVSV-G---VE--VDLPITTSNYLCKISCN-SQA 431 (433)
Q Consensus 392 ~~na~~v~e~~G~G~~l-~---~~--~~~~~~l~~ai~~il~~-~~~ 431 (433)
+.||+++++++|+|+.+ + .. .++.+.++++|++++++ +.+
T Consensus 383 ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~ 429 (463)
T 2acv_A 383 QLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIV 429 (463)
T ss_dssp HHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTH
T ss_pred HHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHH
Confidence 99999942599999999 3 34 67899999999999973 444
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=8e-55 Score=422.76 Aligned_cols=399 Identities=25% Similarity=0.396 Sum_probs=282.9
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCE--EEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAI--VTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGI 78 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 78 (433)
|+.+++++||+++|+|++||++|+++||++|++|||+ ||+++++.+...+...... ....+++++.++. ++
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~~~~i~~~~i~~-----gl 73 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TMQCNIKSYDISD-----GV 73 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCC-----CC
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cCCCceEEEeCCC-----CC
Confidence 7777778899999999999999999999999999765 5778887443332221100 0123689988762 45
Q ss_pred CCCCCCCCCCCCcc-HHHHHHHHH-HhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHh
Q 013951 79 PEGCENCDLLPTTD-FARFMKSLH-MLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHH 156 (433)
Q Consensus 79 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~ 156 (433)
+...+.. . .... +..+..... .+.+.+.+++++.+.+||+||+|.++.|+..+|+++|||+|.++++++..+....
T Consensus 74 p~~~~~~-~-~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 151 (456)
T 2c1x_A 74 PEGYVFA-G-RPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHV 151 (456)
T ss_dssp CTTCCCC-C-CTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHH
T ss_pred CCccccc-C-ChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHh
Confidence 5443211 1 1222 333333332 3334444444332369999999999999999999999999999999877665443
Q ss_pred hhhc---cccCCC--CCCCCCcccCCCCCCCccccccccCccCCC----CcHHHHHHHHHHhcccccEEEEcChhhcchH
Q 013951 157 LLGV---SKVHEN--VTSDSEYFNIPGLPDHIEFTKVQLLISKRD----DDRKELREQILAADKKTYGAIINTFEELESP 227 (433)
Q Consensus 157 ~~~~---~~~~~~--~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~ 227 (433)
+.+. ...... ........++|+++. .+.++++..+.. ..+...+.+......+.+.+++|+++++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~ 228 (456)
T 2c1x_A 152 YIDEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDS 228 (456)
T ss_dssp THHHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHH
T ss_pred hhHHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHH
Confidence 2211 001000 011122235677764 445555543321 1234445555555577888999999999998
Q ss_pred HHHHHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHh
Q 013951 228 FIENYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEA 307 (433)
Q Consensus 228 ~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~ 307 (433)
..+.++..+ +++++|||++...... ....+.++.+|++.++++++|||||||....+.+.+.++++++++
T Consensus 229 ~~~~~~~~~-~~~~~vGpl~~~~~~~---------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~ 298 (456)
T 2c1x_A 229 LTNDLKSKL-KTYLNIGPFNLITPPP---------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEA 298 (456)
T ss_dssp HHHHHHHHS-SCEEECCCHHHHC------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-CCEEEecCcccCcccc---------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHh
Confidence 777776655 6899999997542210 011235688999998888999999999998888889999999999
Q ss_pred CCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEeccc
Q 013951 308 SNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL 387 (433)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~ 387 (433)
.++++||+++..... . +|+++.++. .+|+.+.+|+||.++|+|+++++||||||+||++||+++|||||++|+
T Consensus 299 ~~~~~lw~~~~~~~~----~--l~~~~~~~~-~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~ 371 (456)
T 2c1x_A 299 SRVPFIWSLRDKARV----H--LPEGFLEKT-RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPF 371 (456)
T ss_dssp HTCCEEEECCGGGGG----G--SCTTHHHHH-TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred cCCeEEEEECCcchh----h--CCHHHHhhc-CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCC
Confidence 999999999865321 1 666665543 578999999999999999999999999999999999999999999999
Q ss_pred ccccchhHHHhhhhc-cceEEeeeeccCCcccccchhhccccc
Q 013951 388 FADQFCNEKLIVNVL-RIGVSVGVEVDLPITTSNYLCKISCNS 429 (433)
Q Consensus 388 ~~DQ~~na~~v~e~~-G~G~~l~~~~~~~~~l~~ai~~il~~~ 429 (433)
+.||+.||++++ +. |+|+.++...++.+.++++|+++++|+
T Consensus 372 ~~dQ~~Na~~l~-~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 372 FGDQRLNGRMVE-DVLEIGVRIEGGVFTKSGLMSCFDQILSQE 413 (456)
T ss_dssp STTHHHHHHHHH-HTSCCEEECGGGSCCHHHHHHHHHHHHHSH
T ss_pred hhhHHHHHHHHH-HHhCeEEEecCCCcCHHHHHHHHHHHHCCC
Confidence 999999999994 87 999999888899999999999999886
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.3e-44 Score=346.94 Aligned_cols=369 Identities=16% Similarity=0.150 Sum_probs=248.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCEN 84 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (433)
|+++||+|+++++.||++|+++||++|++|||+|+|++++...+.+.+. +++|+.++.. ++.....
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~---------g~~~~~~~~~-----~~~~~~~ 75 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA---------GATPVVYDSI-----LPKESNP 75 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH---------TCEEEECCCC-----SCCTTCT
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC---------CCEEEecCcc-----ccccccc
Confidence 4568999999999999999999999999999999999998665444332 6888877631 2221111
Q ss_pred CCCCC-C-cc-HHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhcc
Q 013951 85 CDLLP-T-TD-FARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGVS 161 (433)
Q Consensus 85 ~~~~~-~-~~-~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~ 161 (433)
..... . .. +..+......+.+.+.+++++ .+||+||+|.+..++..+|+++|||++.+++.+.........+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 153 (424)
T 2iya_A 76 EESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV 153 (424)
T ss_dssp TCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc
Confidence 01011 1 11 222233334566778888888 8999999999888999999999999999987664211100000000
Q ss_pred ccCCCCCCCCCcccCC-CCCCCccccccccCccCCCCcHHHHHHHHHHh----------cccccEEEEcChhhcchHHHH
Q 013951 162 KVHENVTSDSEYFNIP-GLPDHIEFTKVQLLISKRDDDRKELREQILAA----------DKKTYGAIINTFEELESPFIE 230 (433)
Q Consensus 162 ~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~~~l~~~~~~ 230 (433)
.............| +........ ..... ...+.+.+...+.. ......+++++.+.++++
T Consensus 154 --~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~--- 224 (424)
T 2iya_A 154 --QDPTADRGEEAAAPAGTGDAEEGA-EAEDG---LVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK--- 224 (424)
T ss_dssp --SCCCC----------------------HHH---HHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT---
T ss_pred --cccccccccccccccccccchhhh-ccchh---HHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC---
Confidence 00000000000000 000000000 00000 00000111111111 113456788898888864
Q ss_pred HHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhCCC
Q 013951 231 NYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEASNK 310 (433)
Q Consensus 231 ~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~ 310 (433)
...+++++.+|||+.... .+..+|++..+++++|||++||......+.+..+++++++.++
T Consensus 225 --~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 285 (424)
T 2iya_A 225 --GDTVGDNYTFVGPTYGDR-----------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDW 285 (424)
T ss_dssp --GGGCCTTEEECCCCCCCC-----------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSS
T ss_pred --ccCCCCCEEEeCCCCCCc-----------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCc
Confidence 245778999999975421 1123576655557799999999986667788889999999899
Q ss_pred CEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEecccccc
Q 013951 311 PFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFAD 390 (433)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~D 390 (433)
+++|.++.....+.+.. .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...|
T Consensus 286 ~~~~~~g~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 352 (424)
T 2iya_A 286 HVVLSVGRFVDPADLGE-----------VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAE 352 (424)
T ss_dssp EEEEECCTTSCGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHH
T ss_pred EEEEEECCcCChHHhcc-----------CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccc
Confidence 99999886532211111 2479999999999999999998 9999999999999999999999999999
Q ss_pred cchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 391 QFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 391 Q~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
|+.||+++ ++.|+|+.++.++++.+.+.++|+++++|+++
T Consensus 353 Q~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 392 (424)
T 2iya_A 353 QTMNAERI-VELGLGRHIPRDQVTAEKLREAVLAVASDPGV 392 (424)
T ss_dssp HHHHHHHH-HHTTSEEECCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred hHHHHHHH-HHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHH
Confidence 99999999 59999999998888999999999999988754
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.4e-42 Score=333.78 Aligned_cols=336 Identities=16% Similarity=0.139 Sum_probs=213.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccC--CCCCCCC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEA--GIPEGCE 83 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~ 83 (433)
+.+||||+++|+.||++|+++||++|++|||+|||++++...+ .. ..++.+..+....... ..+....
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~----~~------~~g~~~~~~~~~~~~~~~~~~~~~~ 90 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA----VA------EAGLCAVDVSPGVNYAKLFVPDDTD 90 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH----HH------TTTCEEEESSTTCCSHHHHSCCC--
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh----HH------hcCCeeEecCCchhHhhhccccccc
Confidence 4689999999999999999999999999999999999985443 21 1256776654221110 0011111
Q ss_pred CCCCCC---C-cc-HHH-HHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhh
Q 013951 84 NCDLLP---T-TD-FAR-FMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHHL 157 (433)
Q Consensus 84 ~~~~~~---~-~~-~~~-~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 157 (433)
...... . .. +.. +..........+.+++++ ++||+||+|.+..++..+|+.+|||++.+...+.........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~ 168 (400)
T 4amg_A 91 VTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS--WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA 168 (400)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH
T ss_pred cccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh
Confidence 111000 0 11 111 112223455677788888 899999999999999999999999999865543322111000
Q ss_pred hhccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhc----ccccEEEEcChhhcchHHHHHH-
Q 013951 158 LGVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAAD----KKTYGAIINTFEELESPFIENY- 232 (433)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~l~~~~~~~~- 232 (433)
. ..+......... ............ ......
T Consensus 169 ~----------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 204 (400)
T 4amg_A 169 L----------------------------------------IRRAMSKDYERHGVTGEPTGSVRLTTTP----PSVEALL 204 (400)
T ss_dssp H----------------------------------------HHHHTHHHHHHTTCCCCCSCEEEEECCC----HHHHHTS
T ss_pred H----------------------------------------HHHHHHHHHHHhCCCcccccchhhcccC----chhhccC
Confidence 0 000000111100 011111111111 000000
Q ss_pred Hh-hcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCC--hhhHHHHHHHHHhCC
Q 013951 233 KK-AKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLP--SSQLIELGLGLEASN 309 (433)
Q Consensus 233 ~~-~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~ 309 (433)
+. ...+....+++.... ....+.+|++..+++++|||||||+.... .+.+..+++++++.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~ 268 (400)
T 4amg_A 205 PEDRRSPGAWPMRYVPYN----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVD 268 (400)
T ss_dssp CGGGCCTTCEECCCCCCC----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSS
T ss_pred cccccCCcccCccccccc----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccC
Confidence 00 001122222222111 13345568888888899999999987644 356788999999999
Q ss_pred CCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEeccccc
Q 013951 310 KPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFA 389 (433)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~ 389 (433)
.+++|..++..... .. ..++|+.+.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+++
T Consensus 269 ~~~v~~~~~~~~~~------~~------~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~ 334 (400)
T 4amg_A 269 AEFVLTLGGGDLAL------LG------ELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGS 334 (400)
T ss_dssp SEEEEECCTTCCCC------CC------CCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC--
T ss_pred ceEEEEecCccccc------cc------cCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcc
Confidence 99999987764321 10 13579999999999999999998 999999999999999999999999999
Q ss_pred ccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccccc
Q 013951 390 DQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQAQ 432 (433)
Q Consensus 390 DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~~ 432 (433)
||+.||+++ ++.|+|+.++..++ +.++|+++|+|+.++
T Consensus 335 dQ~~na~~v-~~~G~g~~l~~~~~----~~~al~~lL~d~~~r 372 (400)
T 4amg_A 335 YQDTNRDVL-TGLGIGFDAEAGSL----GAEQCRRLLDDAGLR 372 (400)
T ss_dssp -CHHHHHHH-HHHTSEEECCTTTC----SHHHHHHHHHCHHHH
T ss_pred cHHHHHHHH-HHCCCEEEcCCCCc----hHHHHHHHHcCHHHH
Confidence 999999999 59999999986554 567888999987654
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.3e-41 Score=325.55 Aligned_cols=346 Identities=15% Similarity=0.120 Sum_probs=229.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENCDL 87 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (433)
+||+|++.++.||++|+++||++|++|||+|+|++++...+. +... +++++.++....+ .+ .....
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~----v~~~-----g~~~~~i~~~~~~-~~----~~~~~ 66 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAER----LAEV-----GVPHVPVGPSARA-PI----QRAKP 66 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHH----HHHT-----TCCEEECCC------------CCSC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHH----HHHc-----CCeeeeCCCCHHH-Hh----hcccc
Confidence 489999999999999999999999999999999999964433 2222 6888887643211 11 11110
Q ss_pred CCCccHHHHHHHHHH-hHHHHHHHHHhCCCCCcEEEECC-CCcc--hHHHHHHcCCCcEEEecchHHHHHHHhhhhcccc
Q 013951 88 LPTTDFARFMKSLHM-LQQPFENLFKEKTLKPCCIISDM-CFPW--TVDTAAKFNVPRIIFHGFSCFCLFCHHLLGVSKV 163 (433)
Q Consensus 88 ~~~~~~~~~~~~~~~-~~~~l~~~l~~~~~~pD~vI~D~-~~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 163 (433)
.... .+...+.. ....+.++.+. ..+||+||+|. +..+ +..+|+++|||++.+++.+.+...
T Consensus 67 --~~~~-~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~---------- 132 (415)
T 1iir_A 67 --LTAE-DVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS---------- 132 (415)
T ss_dssp --CCHH-HHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC----------
T ss_pred --cchH-HHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC----------
Confidence 1111 11111111 12333444431 27999999998 5668 899999999999998877644210
Q ss_pred CCCCCCCCCcccCCCCCCCcccccc----ccCccCCCCc----HHHHHHHHHHhc------------ccccEEEEcChhh
Q 013951 164 HENVTSDSEYFNIPGLPDHIEFTKV----QLLISKRDDD----RKELREQILAAD------------KKTYGAIINTFEE 223 (433)
Q Consensus 164 ~~~~~~~~~~~~~p~l~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~~~------------~~~~~~~~~s~~~ 223 (433)
.++|.....+....+ .+...+.... +.......+... ... ..++++.+.
T Consensus 133 ----------~~~p~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~ 201 (415)
T 1iir_A 133 ----------PYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPV 201 (415)
T ss_dssp ----------SSSCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTT
T ss_pred ----------cccCCccCCccccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChh
Confidence 001100000000000 0000000000 000111111111 112 467888888
Q ss_pred cch-HHHHHHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHH
Q 013951 224 LES-PFIENYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELG 302 (433)
Q Consensus 224 l~~-~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~ 302 (433)
+++ + +..+ ++.+|||+..... +..+.++.+|++..+ ++|||++||+. ...+....++
T Consensus 202 l~~~~-----~~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~~~~ 259 (415)
T 1iir_A 202 LAPLQ-----PTDL--DAVQTGAWILPDE------------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVRVAI 259 (415)
T ss_dssp TSCCC-----CCSS--CCEECCCCCCCCC------------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHHHHH
T ss_pred hcCCC-----cccC--CeEeeCCCccCcc------------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHHHHH
Confidence 875 2 1122 7899999865421 124678899998653 58999999987 5667778889
Q ss_pred HHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcE
Q 013951 303 LGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQM 382 (433)
Q Consensus 303 ~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~ 382 (433)
+++++.+.+++|+++..... ... + ++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+
T Consensus 260 ~al~~~~~~~v~~~g~~~~~--~~~--~---------~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~ 324 (415)
T 1iir_A 260 DAIRAHGRRVILSRGWADLV--LPD--D---------GADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQ 324 (415)
T ss_dssp HHHHHTTCCEEECTTCTTCC--CSS--C---------GGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCE
T ss_pred HHHHHCCCeEEEEeCCCccc--ccC--C---------CCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCE
Confidence 99999999999998765321 001 2 368999999999999988888 99999999999999999999
Q ss_pred EecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 383 LTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 383 v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
|++|...||..||+++ ++.|+|+.++.++++.+.+.++|+++ +|+++
T Consensus 325 i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~ 371 (415)
T 1iir_A 325 ILLPQMADQPYYAGRV-AELGVGVAHDGPIPTFDSLSAALATA-LTPET 371 (415)
T ss_dssp EECCCSTTHHHHHHHH-HHHTSEEECSSSSCCHHHHHHHHHHH-TSHHH
T ss_pred EECCCCCccHHHHHHH-HHCCCcccCCcCCCCHHHHHHHHHHH-cCHHH
Confidence 9999999999999999 69999999988888999999999999 87654
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=6.2e-40 Score=316.92 Aligned_cols=350 Identities=15% Similarity=0.115 Sum_probs=240.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCC--
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCE-- 83 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-- 83 (433)
+++||+|++.++.||++|+++||++|+++||+|+|++++...+.+.+ . ++.+..++.+ ++....
T Consensus 19 ~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~----~-----G~~~~~~~~~-----~~~~~~~~ 84 (415)
T 3rsc_A 19 HMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA----A-----GATVVPYQSE-----IIDADAAE 84 (415)
T ss_dssp CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH----T-----TCEEEECCCS-----TTTCCHHH
T ss_pred cCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh----c-----CCEEEecccc-----ccccccch
Confidence 46799999999999999999999999999999999998855544332 2 6888887632 111100
Q ss_pred CCCCCCCcc-HHH-HHHHHHHhHHHHHHHHHhCCCCCcEEEEC-CCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhc
Q 013951 84 NCDLLPTTD-FAR-FMKSLHMLQQPFENLFKEKTLKPCCIISD-MCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGV 160 (433)
Q Consensus 84 ~~~~~~~~~-~~~-~~~~~~~~~~~l~~~l~~~~~~pD~vI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (433)
......... +.. +......+...+.+++++ ++||+||+| ....++..+|+++|||++.+.+.......
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~------- 155 (415)
T 3rsc_A 85 VFGSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH------- 155 (415)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-------
T ss_pred hhccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-------
Confidence 000011112 333 334444566778888888 999999999 77778999999999999998644321100
Q ss_pred cccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhc----------ccc-cEEEEcChhhcchHHH
Q 013951 161 SKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAAD----------KKT-YGAIINTFEELESPFI 229 (433)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~s~~~l~~~~~ 229 (433)
+.... .......+..+. ....+...+....... ... ...+....+.+++
T Consensus 156 ---~~~~~-~~~~~~~~~~p~-------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~--- 215 (415)
T 3rsc_A 156 ---YSFSQ-DMVTLAGTIDPL-------------DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI--- 215 (415)
T ss_dssp ---CCHHH-HHHHHHTCCCGG-------------GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST---
T ss_pred ---ccccc-ccccccccCChh-------------hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC---
Confidence 00000 000000000000 0000111111111111 111 4445555444443
Q ss_pred HHHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhCC
Q 013951 230 ENYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEASN 309 (433)
Q Consensus 230 ~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 309 (433)
....++.++.++||..... .+..+|....+++++|||++||......+.+..+++++++.+
T Consensus 216 --~~~~~~~~~~~vGp~~~~~-----------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~ 276 (415)
T 3rsc_A 216 --AGDTFDDRFVFVGPCFDDR-----------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP 276 (415)
T ss_dssp --TGGGCCTTEEECCCCCCCC-----------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS
T ss_pred --CcccCCCceEEeCCCCCCc-----------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCC
Confidence 2345678899999875431 123345544455679999999998777778888999999999
Q ss_pred CCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEeccccc
Q 013951 310 KPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFA 389 (433)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~ 389 (433)
.+++|.++.+...+.+.. .++|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|...
T Consensus 277 ~~~v~~~g~~~~~~~l~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 343 (415)
T 3rsc_A 277 WHVVMTLGGQVDPAALGD-----------LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSF 343 (415)
T ss_dssp CEEEEECTTTSCGGGGCC-----------CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSG
T ss_pred cEEEEEeCCCCChHHhcC-----------CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcc
Confidence 999999886532211111 2479999999999999999988 999999999999999999999999999
Q ss_pred ccchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 390 DQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 390 DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
||+.||.++ ++.|+|+.++.++++.+.+.++|.++|+|+++
T Consensus 344 ~q~~~a~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 384 (415)
T 3rsc_A 344 DVQPMARRV-DQLGLGAVLPGEKADGDTLLAAVGAVAADPAL 384 (415)
T ss_dssp GGHHHHHHH-HHHTCEEECCGGGCCHHHHHHHHHHHHTCHHH
T ss_pred hHHHHHHHH-HHcCCEEEcccCCCCHHHHHHHHHHHHcCHHH
Confidence 999999999 59999999999889999999999999998754
No 10
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.8e-40 Score=317.60 Aligned_cols=355 Identities=13% Similarity=0.032 Sum_probs=232.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENCDL 87 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (433)
+||+|++.++.||++|+++||++|+++||+|+|++++...+.+.+ . +++++.++..... .... . ...
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~----~-----g~~~~~~~~~~~~-~~~~-~--~~~ 67 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE----V-----GVPHVPVGLPQHM-MLQE-G--MPP 67 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH----H-----TCCEEECSCCGGG-CCCT-T--SCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH----c-----CCeeeecCCCHHH-HHhh-c--ccc
Confidence 489999999999999999999999999999999999864443333 2 6888887643111 1111 0 000
Q ss_pred CCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCC-Ccc--hHHHHHHcCCCcEEEecchHHHHHHHhhhhccccC
Q 013951 88 LPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMC-FPW--TVDTAAKFNVPRIIFHGFSCFCLFCHHLLGVSKVH 164 (433)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~--~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (433)
.... .+..........+.+.+++...+||+||+|.+ ..+ +..+|+.+|||++.+++.+.+... .+
T Consensus 68 --~~~~-~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~---------~~ 135 (416)
T 1rrv_A 68 --PPPE-EEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS---------PH 135 (416)
T ss_dssp --CCHH-HHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC---------SS
T ss_pred --chhH-HHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC---------cc
Confidence 1110 11111111212223333311279999999973 456 889999999999998776543210 00
Q ss_pred CCCCCCCCcccCCCCCCCcccccc-ccCccCCCCcHHHHHHHHHH------------hcccccEEEEcChhhcchHHHHH
Q 013951 165 ENVTSDSEYFNIPGLPDHIEFTKV-QLLISKRDDDRKELREQILA------------ADKKTYGAIINTFEELESPFIEN 231 (433)
Q Consensus 165 ~~~~~~~~~~~~p~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~s~~~l~~~~~~~ 231 (433)
.+ +... .+..+.+...... ..........+.......+. ..... .+++++.+.++++.
T Consensus 136 --~p-~~~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~--- 206 (416)
T 1rrv_A 136 --LP-PAYD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPLQ--- 206 (416)
T ss_dssp --SC-CCBC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCCC---
T ss_pred --cC-CCCC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCCC---
Confidence 00 0000 0000000000000 00000000000001111111 11122 57788888887531
Q ss_pred HHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcC-CChhhHHHHHHHHHhCCC
Q 013951 232 YKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICN-LPSSQLIELGLGLEASNK 310 (433)
Q Consensus 232 ~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~ 310 (433)
..+ ++.+|||+..... +..+.++.+|++..+ ++|||++||... ...+.+..+++++++.+.
T Consensus 207 --~~~--~~~~vG~~~~~~~------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~ 268 (416)
T 1rrv_A 207 --PDV--DAVQTGAWLLSDE------------RPLPPELEAFLAAGS--PPVHIGFGSSSGRGIADAAKVAVEAIRAQGR 268 (416)
T ss_dssp --SSC--CCEECCCCCCCCC------------CCCCHHHHHHHHSSS--CCEEECCTTCCSHHHHHHHHHHHHHHHHTTC
T ss_pred --CCC--CeeeECCCccCcc------------CCCCHHHHHHHhcCC--CeEEEecCCCCccChHHHHHHHHHHHHHCCC
Confidence 122 7899999865421 124678899997763 589999999865 345667788999999999
Q ss_pred CEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEecccccc
Q 013951 311 PFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFAD 390 (433)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~D 390 (433)
+++|+++..... .. ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+|++|...|
T Consensus 269 ~~v~~~g~~~~~--~~-----------~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~d 333 (416)
T 1rrv_A 269 RVILSRGWTELV--LP-----------DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTD 333 (416)
T ss_dssp CEEEECTTTTCC--CS-----------CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBT
T ss_pred eEEEEeCCcccc--cc-----------CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCC
Confidence 999998765321 00 12468999999999999988888 9999999999999999999999999999
Q ss_pred cchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 391 QFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 391 Q~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
|+.||+++ ++.|+|+.++.++++.+.+.++|+++ +|+++
T Consensus 334 Q~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~ 372 (416)
T 1rrv_A 334 QPYFAGRV-AALGIGVAHDGPTPTFESLSAALTTV-LAPET 372 (416)
T ss_dssp HHHHHHHH-HHHTSEEECSSSCCCHHHHHHHHHHH-TSHHH
T ss_pred cHHHHHHH-HHCCCccCCCCCCCCHHHHHHHHHHh-hCHHH
Confidence 99999999 69999999988888999999999999 87654
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.6e-39 Score=312.20 Aligned_cols=339 Identities=14% Similarity=0.018 Sum_probs=229.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENCDL 87 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (433)
+||+|++.++.||++|+++||++|++|||+|+|++++...+ .++.. ++.+..++...... .....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~----~v~~~-----g~~~~~l~~~~~~~------~~~~~ 65 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVE----RCAEV-----GVPMVPVGRAVRAG------AREPG 65 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHH----HHHHT-----TCCEEECSSCSSGG------GSCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHH----HHHHc-----CCceeecCCCHHHH------hcccc
Confidence 48999999999999999999999999999999999985443 33332 78888886432211 00000
Q ss_pred CCCcc-HHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcch---HHHHHHcCCCcEEEecchHHHHHHHhhhhcccc
Q 013951 88 LPTTD-FARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWT---VDTAAKFNVPRIIFHGFSCFCLFCHHLLGVSKV 163 (433)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~---~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 163 (433)
..... ...+..........+.+++ .+||+||+|.....+ ..+|+++|||++.+...+......
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~l~~~~----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~--------- 132 (404)
T 3h4t_A 66 ELPPGAAEVVTEVVAEWFDKVPAAI----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE--------- 132 (404)
T ss_dssp CCCTTCGGGHHHHHHHHHHHHHHHH----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG---------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHh----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh---------
Confidence 00111 1112222233333444433 479999999765533 789999999999887765421000
Q ss_pred CCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcc-----------cccEEEEcChhhcchHHHHHH
Q 013951 164 HENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADK-----------KTYGAIINTFEELESPFIENY 232 (433)
Q Consensus 164 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~~~l~~~~~~~~ 232 (433)
... ..+..... .....+.+..+..+.... .....+++..+.+.+.
T Consensus 133 --------------~~~----~~~~~~~~-~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~----- 188 (404)
T 3h4t_A 133 --------------QSQ----AERDMYNQ-GADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL----- 188 (404)
T ss_dssp --------------SCH----HHHHHHHH-HHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC-----
T ss_pred --------------hHH----HHHHHHHH-HHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC-----
Confidence 000 00000000 000000011111111000 0111244555555543
Q ss_pred HhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhCCCCE
Q 013951 233 KKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEASNKPF 312 (433)
Q Consensus 233 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~ 312 (433)
+++++++.++|++..+.. ..+++++.+|++.. +++||||+||+.. ..+.+..+++++++.++++
T Consensus 189 -~~~~~~~~~~G~~~~~~~------------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~v 252 (404)
T 3h4t_A 189 -RPTDLGTVQTGAWILPDQ------------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRV 252 (404)
T ss_dssp -CTTCCSCCBCCCCCCCCC------------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCE
T ss_pred -CCCCCCeEEeCccccCCC------------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEE
Confidence 345678889997754421 22578899999854 4589999999987 6777888999999999999
Q ss_pred EEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEecccccccc
Q 013951 313 VWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFADQF 392 (433)
Q Consensus 313 i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~DQ~ 392 (433)
||+.++.... ... ..+|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|...||+
T Consensus 253 v~~~g~~~~~-------~~~------~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~ 317 (404)
T 3h4t_A 253 VLSSGWAGLG-------RID------EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQP 317 (404)
T ss_dssp EEECTTTTCC-------CSS------CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHH
T ss_pred EEEeCCcccc-------ccc------CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHH
Confidence 9998865321 110 2579999999999999999888 999999999999999999999999999999
Q ss_pred hhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 393 CNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 393 ~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
.||.++ ++.|+|+.++..+++.+.+.++|+++|+ +++
T Consensus 318 ~na~~~-~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~ 354 (404)
T 3h4t_A 318 YYAGRV-ADLGVGVAHDGPTPTVESLSAALATALT-PGI 354 (404)
T ss_dssp HHHHHH-HHHTSEEECSSSSCCHHHHHHHHHHHTS-HHH
T ss_pred HHHHHH-HHCCCEeccCcCCCCHHHHHHHHHHHhC-HHH
Confidence 999999 6999999999888999999999999998 543
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.5e-39 Score=310.28 Aligned_cols=351 Identities=17% Similarity=0.170 Sum_probs=237.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCEN 84 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (433)
|+++||+|++.++.||++|++.||++|+++||+|+|++++...+. .... ++.+..++.+..... ....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~----~~~~-----G~~~~~~~~~~~~~~---~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADE----VKAA-----GAEVVLYKSEFDTFH---VPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHH----HHHT-----TCEEEECCCGGGTSS---SSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHH----HHHc-----CCEEEeccccccccc---cccc
Confidence 345699999999999999999999999999999999998744333 3222 688888764211100 0000
Q ss_pred CCCCCCcc-HHH-HHHHHHHhHHHHHHHHHhCCCCCcEEEEC-CCCcchHHHHHHcCCCcEEEecchHHHHHHHh--hhh
Q 013951 85 CDLLPTTD-FAR-FMKSLHMLQQPFENLFKEKTLKPCCIISD-MCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHH--LLG 159 (433)
Q Consensus 85 ~~~~~~~~-~~~-~~~~~~~~~~~l~~~l~~~~~~pD~vI~D-~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~--~~~ 159 (433)
........ +.. +......+...+.+++++ ++||+||+| .+..++..+|+++|||+|.+.+.......... ...
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~ 147 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELW 147 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccccc
Confidence 01111111 222 333333456778888888 999999999 77778999999999999988644321100000 000
Q ss_pred ccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHh----------cccc-cEEEEcChhhcchHH
Q 013951 160 VSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAA----------DKKT-YGAIINTFEELESPF 228 (433)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~s~~~l~~~~ 228 (433)
.......+.. . ..+...+...... .... ...+....+.+++.
T Consensus 148 -------------~~~~~~~~~~-----------~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~- 200 (402)
T 3ia7_A 148 -------------KSNGQRHPAD-----------V--EAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF- 200 (402)
T ss_dssp -------------HHHTCCCGGG-----------S--HHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-
T ss_pred -------------ccccccChhh-----------H--HHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-
Confidence 0000000000 0 0011111111111 0111 33444444444432
Q ss_pred HHHHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhC
Q 013951 229 IENYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEAS 308 (433)
Q Consensus 229 ~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~ 308 (433)
...++.++.+|||...... +..+|....+++++|||++||......+.+..+++++++.
T Consensus 201 ----~~~~~~~~~~vGp~~~~~~-----------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~ 259 (402)
T 3ia7_A 201 ----AETFDERFAFVGPTLTGRD-----------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADT 259 (402)
T ss_dssp ----GGGCCTTEEECCCCCCC---------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTS
T ss_pred ----cccCCCCeEEeCCCCCCcc-----------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcC
Confidence 3456788999998754321 2234554445567999999999877777888999999999
Q ss_pred CCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEeccc-
Q 013951 309 NKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPL- 387 (433)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~- 387 (433)
+.+++|.++.+...+.+.. ..+|+.+.+|+|+.++|+++++ +|||||.||++||+++|+|+|++|.
T Consensus 260 ~~~~~~~~g~~~~~~~~~~-----------~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 326 (402)
T 3ia7_A 260 PWHVVMAIGGFLDPAVLGP-----------LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHF 326 (402)
T ss_dssp SCEEEEECCTTSCGGGGCS-----------CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGG
T ss_pred CcEEEEEeCCcCChhhhCC-----------CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCC
Confidence 9999998887532211111 2579999999999999999988 9999999999999999999999999
Q ss_pred ccccchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 388 FADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 388 ~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
..||..||.++ ++.|+|+.++.++++.+.+.++|.++|+|+++
T Consensus 327 ~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~ 369 (402)
T 3ia7_A 327 ATEAAPSAERV-IELGLGSVLRPDQLEPASIREAVERLAADSAV 369 (402)
T ss_dssp CGGGHHHHHHH-HHTTSEEECCGGGCSHHHHHHHHHHHHHCHHH
T ss_pred cccHHHHHHHH-HHcCCEEEccCCCCCHHHHHHHHHHHHcCHHH
Confidence 99999999999 59999999999889999999999999998753
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.8e-38 Score=308.09 Aligned_cols=355 Identities=17% Similarity=0.182 Sum_probs=233.1
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPE 80 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (433)
|+..|+++||+|++.++.||++|++.||++|+++||+|+++++....+. ... .+++++.++.. .+.
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~----~~~-----~g~~~~~~~~~-----~~~ 66 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADK----VAA-----TGPRPVLYHST-----LPG 66 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHH----HHT-----TSCEEEECCCC-----SCC
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHH----HHh-----CCCEEEEcCCc-----Ccc
Confidence 6666767899999999999999999999999999999999998854332 221 26788776531 111
Q ss_pred CCCCCCCCC-C-cc-HHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhh
Q 013951 81 GCENCDLLP-T-TD-FARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHHL 157 (433)
Q Consensus 81 ~~~~~~~~~-~-~~-~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 157 (433)
......... . .. +..+......+...+.+++++ .+||+||+|....++..+|+++|||+|.+++...........
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~ 144 (430)
T 2iyf_A 67 PDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEE 144 (430)
T ss_dssp TTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHH
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccc
Confidence 111100000 1 11 222223334556778888888 899999999877788999999999999987654311000000
Q ss_pred hhccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHH----------hcccccEEEEcChhhcchH
Q 013951 158 LGVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILA----------ADKKTYGAIINTFEELESP 227 (433)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~s~~~l~~~ 227 (433)
+... .. ......++. .. +......... .......+++++.+.+++.
T Consensus 145 ~~~~-~~------~~~~~~~~~-----------~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~ 200 (430)
T 2iyf_A 145 VAEP-MW------REPRQTERG-----------RA------YYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH 200 (430)
T ss_dssp THHH-HH------HHHHHSHHH-----------HH------HHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT
T ss_pred cccc-hh------hhhccchHH-----------HH------HHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC
Confidence 0000 00 000000000 00 0000111111 1113456788888877753
Q ss_pred HHHHHHhhcCCc-EEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHH
Q 013951 228 FIENYKKAKQGK-VWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLE 306 (433)
Q Consensus 228 ~~~~~~~~~~~~-~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~ 306 (433)
...++++ +.+|||...... +..+|....+++++||+++||......+.+..++++++
T Consensus 201 -----~~~~~~~~v~~vG~~~~~~~-----------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~ 258 (430)
T 2iyf_A 201 -----ADRVDEDVYTFVGACQGDRA-----------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFG 258 (430)
T ss_dssp -----GGGSCTTTEEECCCCC----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHT
T ss_pred -----cccCCCccEEEeCCcCCCCC-----------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHh
Confidence 1356677 999998643211 01235544445679999999998555677888899998
Q ss_pred hC-CCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEec
Q 013951 307 AS-NKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTW 385 (433)
Q Consensus 307 ~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~ 385 (433)
+. +.+++|.++.+...+.++. ..+|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++
T Consensus 259 ~~~~~~~~~~~G~~~~~~~l~~-----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~ 325 (430)
T 2iyf_A 259 NLPGWHLVLQIGRKVTPAELGE-----------LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAV 325 (430)
T ss_dssp TCTTEEEEEECC---CGGGGCS-----------CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEEC
T ss_pred cCCCeEEEEEeCCCCChHHhcc-----------CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEEC
Confidence 86 7889898876532211111 2479999999999999999998 99999999999999999999999
Q ss_pred ccccccchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 386 PLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 386 P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
|..+||..|+.++ ++.|+|+.++.++++.+.+.++|.++++|++.
T Consensus 326 p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 370 (430)
T 2iyf_A 326 PQAVDQFGNADML-QGLGVARKLATEEATADLLRETALALVDDPEV 370 (430)
T ss_dssp CCSHHHHHHHHHH-HHTTSEEECCCC-CCHHHHHHHHHHHHHCHHH
T ss_pred CCccchHHHHHHH-HHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHH
Confidence 9999999999999 59999999988888999999999999988753
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.3e-37 Score=302.66 Aligned_cols=352 Identities=13% Similarity=0.045 Sum_probs=221.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCC-CC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEG-CE 83 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~ 83 (433)
..++||+|++.++.||++|+++||++|+++||+|+|++++... +.+.. .+++++.++......++... ..
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~----~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~ 88 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALT----EDITA-----AGLTAVPVGTDVDLVDFMTHAGH 88 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGH----HHHHT-----TTCCEEECSCCCCHHHHHHHTTH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhH----HHHHh-----CCCceeecCCccchHHHhhhhhc
Confidence 3457999999999999999999999999999999999988543 33322 27888887643100000000 00
Q ss_pred CC------CCC----C---Ccc-HHHHHHHH----H-----H-hHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCC
Q 013951 84 NC------DLL----P---TTD-FARFMKSL----H-----M-LQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNV 139 (433)
Q Consensus 84 ~~------~~~----~---~~~-~~~~~~~~----~-----~-~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~gi 139 (433)
.. .+. . ... +....... . . ....+.+++++ ++||+||+|.+..++..+|+.+||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 89 DIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK--WRPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH--HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred ccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh--cCCCEEEecCcchhHHHHHHHcCC
Confidence 00 000 1 111 11111111 1 1 45566677788 899999999987889999999999
Q ss_pred CcEEEecchHHHHHHHhhhhccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhccc-------
Q 013951 140 PRIIFHGFSCFCLFCHHLLGVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKK------- 212 (433)
Q Consensus 140 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 212 (433)
|++.+...+.........+... ..+.|... ....+.+.+....+....
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~--------------~~~~~~~~l~~~~~~~g~~~~~~~~ 221 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGL-----------LPDQPEEH--------------REDPLAEWLTWTLEKYGGPAFDEEV 221 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHH-----------GGGSCTTT--------------CCCHHHHHHHHHHHHTTCCCCCGGG
T ss_pred CEEEEecCCCcchhhhhhhhhh-----------cccccccc--------------ccchHHHHHHHHHHHcCCCCCCccc
Confidence 9999865443221111000000 00011000 000122222222222111
Q ss_pred --ccEEEEcChhhcchHHHHHHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCC
Q 013951 213 --TYGAIINTFEELESPFIENYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSI 290 (433)
Q Consensus 213 --~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~ 290 (433)
....+....+.++++ ..++. ..+++... ..+.++.+|++..+++++|||++||.
T Consensus 222 ~~~~~~l~~~~~~~~~~------~~~~~--~~~~~~~~----------------~~~~~~~~~l~~~~~~~~v~v~~Gs~ 277 (441)
T 2yjn_A 222 VVGQWTIDPAPAAIRLD------TGLKT--VGMRYVDY----------------NGPSVVPEWLHDEPERRRVCLTLGIS 277 (441)
T ss_dssp TSCSSEEECSCGGGSCC------CCCCE--EECCCCCC----------------CSSCCCCGGGSSCCSSCEEEEEC---
T ss_pred cCCCeEEEecCccccCC------CCCCC--CceeeeCC----------------CCCcccchHhhcCCCCCEEEEECCCC
Confidence 111222322333211 11110 11222110 01334668988666678999999998
Q ss_pred cCC---ChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeeccc
Q 013951 291 CNL---PSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHC 367 (433)
Q Consensus 291 ~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHG 367 (433)
... ..+.+..+++++++.++++||+.++.... . +. ..++|+.+.+|+||.++|+.+++ |||||
T Consensus 278 ~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~V~~~ 343 (441)
T 2yjn_A 278 SRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE-G-----VA------NIPDNVRTVGFVPMHALLPTCAA--TVHHG 343 (441)
T ss_dssp -------CCSTTTTHHHHHTSSSEEEECCCTTTTS-S-----CS------SCCSSEEECCSCCHHHHGGGCSE--EEECC
T ss_pred cccccChHHHHHHHHHHHHcCCCEEEEEECCcchh-h-----hc------cCCCCEEEecCCCHHHHHhhCCE--EEECC
Confidence 764 34567778899999999999998864321 0 11 02479999999999999988888 99999
Q ss_pred chhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 368 GWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 368 G~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
|.||++||+++|||+|++|...||+.||.++ ++.|+|+.++.++++.+.+.++|.++|+|+++
T Consensus 344 G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 406 (441)
T 2yjn_A 344 GPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPVPELTPDQLRESVKRVLDDPAH 406 (441)
T ss_dssp CHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCTTTCCHHHHHHHHHHHHHCHHH
T ss_pred CHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEcccccCCHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999999999999999 59999999998888999999999999988754
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6.1e-37 Score=292.84 Aligned_cols=331 Identities=14% Similarity=0.080 Sum_probs=225.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCC-CCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCE-NCD 86 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~ 86 (433)
+||++++.++.||++|+++||++|+++||+|++++++...+ ..... ++.+..++.......+..... ...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~----~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGP----VVTGV-----GLPAVATTDLPIRHFITTDREGRPE 71 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHH----HHHHT-----TCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHH----HHHhC-----CCEEEEeCCcchHHHHhhhcccCcc
Confidence 48999999999999999999999999999999999885433 22222 677877753210000000000 000
Q ss_pred CC-CCcc-HHHH-----HHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhh
Q 013951 87 LL-PTTD-FARF-----MKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHHLLG 159 (433)
Q Consensus 87 ~~-~~~~-~~~~-----~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (433)
.. .... ...+ ..........+.+++++ .+||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~--------- 140 (384)
T 2p6p_A 72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD--------- 140 (384)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC---------
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc---------
Confidence 01 1111 1111 11223345677778888 89999999988778889999999999987532110
Q ss_pred ccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhc-----ccccEEEEcChhhcchHHHHHHHh
Q 013951 160 VSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAAD-----KKTYGAIINTFEELESPFIENYKK 234 (433)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~l~~~~~~~~~~ 234 (433)
. ..+. ..+........... .....+++++.+.++++ .
T Consensus 141 -------------~---~~~~----------------~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~ 182 (384)
T 2p6p_A 141 -------------A---DGIH----------------PGADAELRPELSELGLERLPAPDLFIDICPPSLRPA------N 182 (384)
T ss_dssp -------------C---TTTH----------------HHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------T
T ss_pred -------------c---chhh----------------HHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------C
Confidence 0 0000 00111111111111 11456777887777643 1
Q ss_pred hcC-CcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCC-----ChhhHHHHHHHHHhC
Q 013951 235 AKQ-GKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNL-----PSSQLIELGLGLEAS 308 (433)
Q Consensus 235 ~~~-~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~ 308 (433)
.++ .++.+++. . .+.++.+|++..+++++|||++||.... +.+.+..+++++++.
T Consensus 183 ~~~~~~~~~~~~---~----------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~ 243 (384)
T 2p6p_A 183 AAPARMMRHVAT---S----------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW 243 (384)
T ss_dssp SCCCEECCCCCC---C----------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT
T ss_pred CCCCCceEecCC---C----------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcC
Confidence 222 12233321 0 1234557887655567999999998764 457788899999999
Q ss_pred CCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEecccc
Q 013951 309 NKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF 388 (433)
Q Consensus 309 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~ 388 (433)
+.+++|+.++.. . +.+.. .++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|..
T Consensus 244 ~~~~~~~~g~~~-~---------~~l~~--~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~ 308 (384)
T 2p6p_A 244 DVELIVAAPDTV-A---------EALRA--EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKG 308 (384)
T ss_dssp TCEEEEECCHHH-H---------HHHHH--HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCS
T ss_pred CcEEEEEeCCCC-H---------HhhCC--CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCc
Confidence 999999987531 1 11111 2579999 99999999998888 99999999999999999999999999
Q ss_pred cccchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 389 ADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 389 ~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
.||..||.++ ++.|+|+.++.++++.+.+.++|.++|+|+++
T Consensus 309 ~dq~~~a~~~-~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 350 (384)
T 2p6p_A 309 SVLEAPARRV-ADYGAAIALLPGEDSTEAIADSCQELQAKDTY 350 (384)
T ss_dssp HHHHHHHHHH-HHHTSEEECCTTCCCHHHHHHHHHHHHHCHHH
T ss_pred ccchHHHHHH-HHCCCeEecCcCCCCHHHHHHHHHHHHcCHHH
Confidence 9999999999 59999999988788999999999999988754
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.7e-35 Score=282.74 Aligned_cols=337 Identities=16% Similarity=0.135 Sum_probs=208.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCC--CCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIP--EGC 82 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~ 82 (433)
..++||+|++.++.||++|++.||++|+++||+|++++++...+.+.. . ++.+..++.......+. ...
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~----~-----G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG----A-----GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH----T-----TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh----C-----CCeeEecCCccchHhhhhhhcc
Confidence 346899999999999999999999999999999999998744333322 2 67777775311100000 000
Q ss_pred CCCCCCC-Cc-c-HHH----HHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHHHH
Q 013951 83 ENCDLLP-TT-D-FAR----FMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLFCH 155 (433)
Q Consensus 83 ~~~~~~~-~~-~-~~~----~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~ 155 (433)
....... .. . ... +......+...+.+++++ ++||+||+|....++..+|+.+|||++.+...........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~ 161 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER--WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELIK 161 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHHH
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhhh
Confidence 0000010 00 1 111 112223456678888888 9999999998778899999999999998754432111000
Q ss_pred hhhhccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhc-----ccccEEEEcChhhcchHHHH
Q 013951 156 HLLGVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAAD-----KKTYGAIINTFEELESPFIE 230 (433)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~l~~~~~~ 230 (433)
.. ....+....... ......+......+....
T Consensus 162 ~~-----------------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (398)
T 4fzr_A 162 SA-----------------------------------------GVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP-- 198 (398)
T ss_dssp HH-----------------------------------------HHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC-----
T ss_pred HH-----------------------------------------HHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC--
Confidence 00 001111111110 011222323323332110
Q ss_pred HHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCC--------ChhhHHHHH
Q 013951 231 NYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNL--------PSSQLIELG 302 (433)
Q Consensus 231 ~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~ 302 (433)
......+.++++.. ...++.+|+...+++++|||++||.... ..+.+..++
T Consensus 199 ---~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 4fzr_A 199 ---KPGTTKMRYVPYNG------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALS 257 (398)
T ss_dssp ----CCCEECCCCCCCC------------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHH
T ss_pred ---CCCCCCeeeeCCCC------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHH
Confidence 00000111221100 1234556776655677999999999653 346688899
Q ss_pred HHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcE
Q 013951 303 LGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQM 382 (433)
Q Consensus 303 ~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~ 382 (433)
+++++.+.+++|+.++.... . +. ..++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+|+
T Consensus 258 ~al~~~~~~~v~~~~~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~ 323 (398)
T 4fzr_A 258 QELPKLGFEVVVAVSDKLAQ-T-----LQ------PLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQ 323 (398)
T ss_dssp HHGGGGTCEEEECCCC--------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCE
T ss_pred HHHHhCCCEEEEEeCCcchh-h-----hc------cCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCE
Confidence 99999999999988765311 1 11 13579999999999999999998 99999999999999999999
Q ss_pred EecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 383 LTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 383 v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
|++|...||+.|+.++ ++.|+|+.++.++++.+.|.++|.++|+|+++
T Consensus 324 v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~ 371 (398)
T 4fzr_A 324 VSVPVIAEVWDSARLL-HAAGAGVEVPWEQAGVESVLAACARIRDDSSY 371 (398)
T ss_dssp EECCCSGGGHHHHHHH-HHTTSEEECC-------CHHHHHHHHHHCTHH
T ss_pred EecCCchhHHHHHHHH-HHcCCEEecCcccCCHHHHHHHHHHHHhCHHH
Confidence 9999999999999999 69999999999889999999999999998754
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.4e-33 Score=270.89 Aligned_cols=333 Identities=14% Similarity=0.136 Sum_probs=214.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCC-------
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGI------- 78 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------- 78 (433)
+.+||+|++.++.||++|++.||++|+++||+|+++++ ...+.+.. .++.+..++........
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~ 88 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAKD 88 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhcccC
Confidence 45799999999999999999999999999999999998 44333222 27888877532100000
Q ss_pred -C---CCCCCCCCCCCcc-H-HHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHH
Q 013951 79 -P---EGCENCDLLPTTD-F-ARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCL 152 (433)
Q Consensus 79 -~---~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~ 152 (433)
+ .... ........ + ..+......+...+.+++++ ++||+||+|....++..+|+.+|||+|.+........
T Consensus 89 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~~ 165 (398)
T 3oti_A 89 NPRFAETVA-TRPAIDLEEWGVQIAAVNRPLVDGTMALVDD--YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRTR 165 (398)
T ss_dssp CHHHHHTGG-GSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCCT
T ss_pred Ccccccccc-CChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCcc
Confidence 0 0000 00001111 2 22233344667888999999 9999999998888899999999999998643321100
Q ss_pred HHHhhhhccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHH
Q 013951 153 FCHHLLGVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENY 232 (433)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 232 (433)
.... . .. . ..........-........+......+..+. .
T Consensus 166 -------------------------~~~~----~---~~---~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 205 (398)
T 3oti_A 166 -------------------------GMHR----S---IA---S--FLTDLMDKHQVSLPEPVATIESFPPSLLLEA---E 205 (398)
T ss_dssp -------------------------THHH----H---HH---T--TCHHHHHHTTCCCCCCSEEECSSCGGGGTTS---C
T ss_pred -------------------------chhh----H---HH---H--HHHHHHHHcCCCCCCCCeEEEeCCHHHCCCC---C
Confidence 0000 0 00 0 0011111100000011122222222222100 0
Q ss_pred HhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCC--ChhhHHHHHHHHHhCCC
Q 013951 233 KKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNL--PSSQLIELGLGLEASNK 310 (433)
Q Consensus 233 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~ 310 (433)
...++ +.++ |. ..+..+.+|+...+++++|||++||.... ..+.+..+++++++.+.
T Consensus 206 ~~~~~--~~~~-~~------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~ 264 (398)
T 3oti_A 206 PEGWF--MRWV-PY------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA 264 (398)
T ss_dssp CCSBC--CCCC-CC------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS
T ss_pred CCCCC--cccc-CC------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC
Confidence 00000 1111 00 01233456766555677999999999653 56678889999999999
Q ss_pred CEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEecccccc
Q 013951 311 PFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFAD 390 (433)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~D 390 (433)
+++|+.++.... . +. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...|
T Consensus 265 ~~v~~~g~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~d 330 (398)
T 3oti_A 265 DFVLALGDLDIS-P-----LG------TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRD 330 (398)
T ss_dssp EEEEECTTSCCG-G-----GC------SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTC
T ss_pred EEEEEECCcChh-h-----hc------cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCch
Confidence 999998775421 1 11 12479999999999999999998 9999999999999999999999999999
Q ss_pred cchhH--HHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 391 QFCNE--KLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 391 Q~~na--~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
|..|| .++ ++.|+|+.++..+.+.+.+. ++|+|+++
T Consensus 331 q~~~a~~~~~-~~~g~g~~~~~~~~~~~~l~----~ll~~~~~ 368 (398)
T 3oti_A 331 QFQHTAREAV-SRRGIGLVSTSDKVDADLLR----RLIGDESL 368 (398)
T ss_dssp CSSCTTHHHH-HHHTSEEECCGGGCCHHHHH----HHHHCHHH
T ss_pred hHHHHHHHHH-HHCCCEEeeCCCCCCHHHHH----HHHcCHHH
Confidence 99999 999 69999999988776666554 77777654
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=6.4e-33 Score=265.63 Aligned_cols=334 Identities=13% Similarity=0.136 Sum_probs=216.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEe-cCCCccC-----CCCC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEI-QFPWQEA-----GIPE 80 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~-----~~~~ 80 (433)
++||+|++.++.||++|++.|+++|+++||+|++++++... +..... ++.+..+ ..+.... ..+.
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~----~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~ 71 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQ----ATAHGA-----GLTTAGIRGNDRTGDTGGTTQLRF 71 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHH----HHHHHB-----TCEEEEC--------------CCS
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhH----HHHHhC-----CCceeeecCCccchhhhhhhcccc
Confidence 36999999999999999999999999999999999986332 222222 6777776 3211000 0000
Q ss_pred CCCCCCCCCCccHHH-HHHHHHHh-------HHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHH
Q 013951 81 GCENCDLLPTTDFAR-FMKSLHML-------QQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCL 152 (433)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~~~~~~~-------~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~ 152 (433)
............+.. +......+ ...+.+++++ ++||+||+|....++..+|+.+|||++.+........
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~ 149 (391)
T 3tsa_A 72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA--WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTA 149 (391)
T ss_dssp CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTT
T ss_pred cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh--cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcccc
Confidence 000000011111111 22222234 6778888898 9999999998777888999999999998753321110
Q ss_pred HHHhhhhccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcc-----cccEEEEcChhhcchH
Q 013951 153 FCHHLLGVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADK-----KTYGAIINTFEELESP 227 (433)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~l~~~ 227 (433)
.. .. ............... .....+....+.++..
T Consensus 150 ~~------------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (391)
T 3tsa_A 150 GP------------------------FS----------------DRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS 189 (391)
T ss_dssp TH------------------------HH----------------HHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT
T ss_pred cc------------------------cc----------------chHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC
Confidence 00 00 001111111111111 1122333333333211
Q ss_pred HHHHHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcC---CChhhHHHHHHH
Q 013951 228 FIENYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICN---LPSSQLIELGLG 304 (433)
Q Consensus 228 ~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~---~~~~~~~~~~~a 304 (433)
.......+.++ |. ..+..+..|+...+++++||+++||... ...+.+..++++
T Consensus 190 -----~~~~~~~~~~~-p~------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~ 245 (391)
T 3tsa_A 190 -----DAPQGAPVQYV-PY------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA 245 (391)
T ss_dssp -----TSCCCEECCCC-CC------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH
T ss_pred -----CCCccCCeeee-cC------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh
Confidence 00000111122 10 0122344677665667899999999854 336677888888
Q ss_pred HHhC-CCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEE
Q 013951 305 LEAS-NKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQML 383 (433)
Q Consensus 305 l~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v 383 (433)
++. +.+++|..++.... . +. ...+|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|
T Consensus 246 -~~~p~~~~v~~~~~~~~~-~-----l~------~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v 310 (391)
T 3tsa_A 246 -TELPGVEAVIAVPPEHRA-L-----LT------DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQL 310 (391)
T ss_dssp -HTSTTEEEEEECCGGGGG-G-----CT------TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred -ccCCCeEEEEEECCcchh-h-----cc------cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEE
Confidence 877 77888887764311 1 11 12579999999999999988888 999999999999999999999
Q ss_pred ecccccccchhHHHhhhhccceEEeee--eccCCcccccchhhccccccc
Q 013951 384 TWPLFADQFCNEKLIVNVLRIGVSVGV--EVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 384 ~~P~~~DQ~~na~~v~e~~G~G~~l~~--~~~~~~~l~~ai~~il~~~~~ 431 (433)
++|...||..|+.++ ++.|+|+.++. ++.+.+.+.++|.++|+|+++
T Consensus 311 ~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~ 359 (391)
T 3tsa_A 311 VLPQYFDQFDYARNL-AAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGF 359 (391)
T ss_dssp ECCCSTTHHHHHHHH-HHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHH
T ss_pred ecCCcccHHHHHHHH-HHcCCEEecCcccccCCHHHHHHHHHHHHcCHHH
Confidence 999999999999999 59999999998 788999999999999998754
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=8.6e-31 Score=252.61 Aligned_cols=340 Identities=15% Similarity=0.152 Sum_probs=223.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCcc-------CC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQE-------AG 77 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~ 77 (433)
..++||+|++.++.||++|++.||++|+++||+|++++++... +..... ++.+..++..... ..
T Consensus 18 ~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~----~~~~~~-----g~~~~~~~~~~~~~~~~~~~~~ 88 (412)
T 3otg_A 18 GRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFA----GTLRKL-----GFEPVATGMPVFDGFLAALRIR 88 (412)
T ss_dssp CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGH----HHHHHT-----TCEEEECCCCHHHHHHHHHHHH
T ss_pred cceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHH----HHHHhc-----CCceeecCcccccchhhhhhhh
Confidence 4578999999999999999999999999999999999987432 223222 6888877520000 00
Q ss_pred CCC-CCCCCCCCC-CccHHHHHHH--HHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchHHHHH
Q 013951 78 IPE-GCENCDLLP-TTDFARFMKS--LHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSCFCLF 153 (433)
Q Consensus 78 ~~~-~~~~~~~~~-~~~~~~~~~~--~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~~~~~ 153 (433)
... ......... ...+...... ...+...+.+++++ .+||+||+|....++..+|+.+|||+|.+.........
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~ 166 (412)
T 3otg_A 89 FDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER--LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPDD 166 (412)
T ss_dssp HSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCSH
T ss_pred hcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh--cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCchh
Confidence 000 000000000 0011222221 22345778888888 89999999987778888999999999886433211000
Q ss_pred HHhhhhccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHh----------cccccEEEEcChhh
Q 013951 154 CHHLLGVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAA----------DKKTYGAIINTFEE 223 (433)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~~~ 223 (433)
.. ..+.......... ....+.++..+...
T Consensus 167 ~~-----------------------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~ 205 (412)
T 3otg_A 167 LT-----------------------------------------RSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPS 205 (412)
T ss_dssp HH-----------------------------------------HHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGG
T ss_pred hh-----------------------------------------HHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHH
Confidence 00 0011111111111 01223344444444
Q ss_pred cchHHHHHHHhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhh-hccCCCCeEEEEeeCCCcCCChhhHHHHH
Q 013951 224 LESPFIENYKKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTW-LDSQQPSSVVYVCLGSICNLPSSQLIELG 302 (433)
Q Consensus 224 l~~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~ 302 (433)
++.. ...+......+.+.... ...+..+| ....+++++||+++||......+.+..++
T Consensus 206 ~~~~-----~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~ 264 (412)
T 3otg_A 206 LQEP-----EFRARPRRHELRPVPFA----------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAI 264 (412)
T ss_dssp GSCH-----HHHTCTTEEECCCCCCC----------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHH
T ss_pred hcCC-----cccCCCCcceeeccCCC----------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHH
Confidence 4422 11111111112111110 01223345 23234467999999999755677788899
Q ss_pred HHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcE
Q 013951 303 LGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQM 382 (433)
Q Consensus 303 ~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~ 382 (433)
+++++.+.+++|..++....+.+.. ..+|+.+.+|+|+.++|+++++ ||+|||.||++||+++|+|+
T Consensus 265 ~~l~~~~~~~~~~~g~~~~~~~l~~-----------~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~ 331 (412)
T 3otg_A 265 DGLAGLDADVLVASGPSLDVSGLGE-----------VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQ 331 (412)
T ss_dssp HHHHTSSSEEEEECCSSCCCTTCCC-----------CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCE
T ss_pred HHHHcCCCEEEEEECCCCChhhhcc-----------CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCE
Confidence 9999999999999887642211111 2479999999999999999998 99999999999999999999
Q ss_pred EecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhccccccc
Q 013951 383 LTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 383 v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
|++|...||..|+..+ ++.|+|..++..+++.+.|.++|.++|+|++.
T Consensus 332 v~~p~~~~q~~~~~~v-~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~ 379 (412)
T 3otg_A 332 LSFPWAGDSFANAQAV-AQAGAGDHLLPDNISPDSVSGAAKRLLAEESY 379 (412)
T ss_dssp EECCCSTTHHHHHHHH-HHHTSEEECCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred EecCCchhHHHHHHHH-HHcCCEEecCcccCCHHHHHHHHHHHHhCHHH
Confidence 9999999999999999 59999999999888999999999999988754
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=5.5e-28 Score=228.30 Aligned_cols=313 Identities=15% Similarity=0.113 Sum_probs=193.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCCC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENCD 86 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 86 (433)
++||+|...|+.||++|+++||++|++|||+|+|+++....+ .+.+.. .++.+..++.. +++.. .
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e--~~~v~~-----~g~~~~~i~~~----~~~~~----~ 66 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIE--NDLVPK-----AGLPLHLIQVS----GLRGK----G 66 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTH--HHHTGG-----GTCCEEECC----------------
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHh--hchhhh-----cCCcEEEEECC----CcCCC----C
Confidence 358999998888999999999999999999999999775322 122222 25677766531 11110 0
Q ss_pred CCCCcc-HHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchHHHHHHHhhhhcccc
Q 013951 87 LLPTTD-FARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGVSKV 163 (433)
Q Consensus 87 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 163 (433)
...... ...+..++ ....+++++ .+||+||++.... .+..+|+.+|||++..-
T Consensus 67 ~~~~~~~~~~~~~~~----~~~~~~l~~--~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe------------------ 122 (365)
T 3s2u_A 67 LKSLVKAPLELLKSL----FQALRVIRQ--LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHE------------------ 122 (365)
T ss_dssp ------CHHHHHHHH----HHHHHHHHH--HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEE------------------
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHh--cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEe------------------
Confidence 001111 22222222 244567888 8999999997554 45678899999998631
Q ss_pred CCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHhhcCCcEEEe
Q 013951 164 HENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKKAKQGKVWCI 243 (433)
Q Consensus 164 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~v 243 (433)
...+|++. .++. . +.... +..++++..+ ...+..++
T Consensus 123 ---------~n~~~G~~-------------------nr~l----~--~~a~~-v~~~~~~~~~---------~~~k~~~~ 158 (365)
T 3s2u_A 123 ---------QNAVAGTA-------------------NRSL----A--PIARR-VCEAFPDTFP---------ASDKRLTT 158 (365)
T ss_dssp ---------CSSSCCHH-------------------HHHH----G--GGCSE-EEESSTTSSC---------C---CEEC
T ss_pred ---------cchhhhhH-------------------HHhh----c--cccce-eeeccccccc---------CcCcEEEE
Confidence 11122211 0111 0 11122 2233332111 12456677
Q ss_pred CcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhC----CCCEEEEEeCC
Q 013951 244 GPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEAS----NKPFVWVIRGV 319 (433)
Q Consensus 244 Gpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~ 319 (433)
|+........ +.. ......+++++|+|..||.... ...+.+.++++.. +..++|.+|..
T Consensus 159 g~pvr~~~~~-------------~~~--~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~ 221 (365)
T 3s2u_A 159 GNPVRGELFL-------------DAH--ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQ 221 (365)
T ss_dssp CCCCCGGGCC-------------CTT--SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTT
T ss_pred CCCCchhhcc-------------chh--hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcc
Confidence 7433221110 000 1111123355899999987542 2333456676654 34566666654
Q ss_pred cchhhhhhhhchhhHHHHhCCCCeEEeCcccH-hhhhcCCCceeeecccchhhHHHHHHcCCcEEecccc----cccchh
Q 013951 320 SKLEALEKWLVQENFEERIKGRGLLIRGWAPQ-VLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF----ADQFCN 394 (433)
Q Consensus 320 ~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq-~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~----~DQ~~n 394 (433)
... . +.+.. +....|+.+.+|+++ .++|+.+++ +|||+|.+|++|++++|+|+|++|+. .+|..|
T Consensus 222 ~~~-~-----~~~~~--~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~N 291 (365)
T 3s2u_A 222 HAE-I-----TAERY--RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRN 291 (365)
T ss_dssp THH-H-----HHHHH--HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHH
T ss_pred ccc-c-----cccee--cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHH
Confidence 321 1 11111 123568889999988 469999999 99999999999999999999999974 589999
Q ss_pred HHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 395 EKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 395 a~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
|+.+ ++.|+|+.++.++++++.|.++|.++|+|++
T Consensus 292 A~~l-~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~ 326 (365)
T 3s2u_A 292 AEFL-VRSGAGRLLPQKSTGAAELAAQLSEVLMHPE 326 (365)
T ss_dssp HHHH-HTTTSEEECCTTTCCHHHHHHHHHHHHHCTH
T ss_pred HHHH-HHCCCEEEeecCCCCHHHHHHHHHHHHCCHH
Confidence 9999 5999999999889999999999999999875
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.5e-26 Score=194.40 Aligned_cols=152 Identities=24% Similarity=0.312 Sum_probs=131.7
Q ss_pred CCchhhhhhhccCCCCeEEEEeeCCCcC-CChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCe
Q 013951 265 IDVPECLTWLDSQQPSSVVYVCLGSICN-LPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGL 343 (433)
Q Consensus 265 ~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv 343 (433)
.+++++.+|++..+++++|||++||... ...+.+..+++++++.+.+++|+.++.... . .++|+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~----------~-----~~~~v 70 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD----------T-----LGLNT 70 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT----------T-----CCTTE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc----------c-----CCCcE
Confidence 3688999999877667799999999863 456778889999999899999998765311 0 23689
Q ss_pred EEeCcccHhhhhcCCCceeeecccchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchh
Q 013951 344 LIRGWAPQVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLC 423 (433)
Q Consensus 344 ~~~~~~pq~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~ 423 (433)
.+.+|+||.++|.|+.+++||||||.||++||+++|+|+|++|...||..||.++ ++.|+|+.++.++++.+.+.++|.
T Consensus 71 ~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~ 149 (170)
T 2o6l_A 71 RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDFNTMSSTDLLNALK 149 (170)
T ss_dssp EEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCTTTCCHHHHHHHHH
T ss_pred EEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEeccccCCHHHHHHHHH
Confidence 9999999999997767777999999999999999999999999999999999999 699999999988889999999999
Q ss_pred hcccccccc
Q 013951 424 KISCNSQAQ 432 (433)
Q Consensus 424 ~il~~~~~~ 432 (433)
++++|++++
T Consensus 150 ~ll~~~~~~ 158 (170)
T 2o6l_A 150 RVINDPSYK 158 (170)
T ss_dssp HHHHCHHHH
T ss_pred HHHcCHHHH
Confidence 999887543
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.81 E-value=1.7e-18 Score=163.69 Aligned_cols=307 Identities=13% Similarity=0.065 Sum_probs=189.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENCDL 87 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 87 (433)
+||++++.+..||..+++.||++|.++||+|++++...... .+... ..++.+..++.. .+..
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~--~~~~~-----~~g~~~~~~~~~----~~~~------- 68 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRME--ADLVP-----KHGIEIDFIRIS----GLRG------- 68 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTH--HHHGG-----GGTCEEEECCCC----CCTT-------
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcch--hhhcc-----ccCCceEEecCC----ccCc-------
Confidence 79999998888999999999999999999999999874321 11111 125777666431 1110
Q ss_pred CCCcc-HHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchHHHHHHHhhhhccccC
Q 013951 88 LPTTD-FARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGVSKVH 164 (433)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~ 164 (433)
..... +..... .......+.+++++ .+||+|+++.... .+..+++..|+|+|......
T Consensus 69 ~~~~~~~~~~~~-~~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~---------------- 129 (364)
T 1f0k_A 69 KGIKALIAAPLR-IFNAWRQARAIMKA--YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG---------------- 129 (364)
T ss_dssp CCHHHHHTCHHH-HHHHHHHHHHHHHH--HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS----------------
T ss_pred CccHHHHHHHHH-HHHHHHHHHHHHHh--cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC----------------
Confidence 00000 101111 11234456777888 8999999986432 45677888999998642110
Q ss_pred CCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHhhcCCcEEEeC
Q 013951 165 ENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKKAKQGKVWCIG 244 (433)
Q Consensus 165 ~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~~~~~~vG 244 (433)
.++. ..++ ..+..+.++..+... ++ ++..+|
T Consensus 130 -----------~~~~-------------------~~~~------~~~~~d~v~~~~~~~------------~~-~~~~i~ 160 (364)
T 1f0k_A 130 -----------IAGL-------------------TNKW------LAKIATKVMQAFPGA------------FP-NAEVVG 160 (364)
T ss_dssp -----------SCCH-------------------HHHH------HTTTCSEEEESSTTS------------SS-SCEECC
T ss_pred -----------CCcH-------------------HHHH------HHHhCCEEEecChhh------------cC-CceEeC
Confidence 0000 0011 112233444433211 22 455666
Q ss_pred cCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhC--CCCEEEEEeCCcch
Q 013951 245 PASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEAS--NKPFVWVIRGVSKL 322 (433)
Q Consensus 245 pl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~ 322 (433)
.-..... .. .+. ..+.+...+++++|++..|+... ......++++++.. +.++++.+|.+..
T Consensus 161 n~v~~~~-------~~-----~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~- 224 (364)
T 1f0k_A 161 NPVRTDV-------LA-----LPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQ- 224 (364)
T ss_dssp CCCCHHH-------HT-----SCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCH-
T ss_pred Cccchhh-------cc-----cch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchH-
Confidence 3221100 00 000 11112222334578788888743 33445556666654 4566677776542
Q ss_pred hhhhhhhchhhHHHHhCCCCeEEeCcccH-hhhhcCCCceeeecccchhhHHHHHHcCCcEEecccc---cccchhHHHh
Q 013951 323 EALEKWLVQENFEERIKGRGLLIRGWAPQ-VLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF---ADQFCNEKLI 398 (433)
Q Consensus 323 ~~~~~~~~p~~~~~~~~~~nv~~~~~~pq-~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~---~DQ~~na~~v 398 (433)
+. +.+.. .+..-+||.+.+|+++ ..+++.+++ +|+++|.+++.||+++|+|+|+.+.. .||..|+..+
T Consensus 225 ~~-----l~~~~-~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~ 296 (364)
T 1f0k_A 225 QS-----VEQAY-AEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL 296 (364)
T ss_dssp HH-----HHHHH-HHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH
T ss_pred HH-----HHHHH-hhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH
Confidence 11 11111 1112258999999944 679999999 99999989999999999999999987 7999999999
Q ss_pred hhhccceEEeeeeccCCcccccchhhc
Q 013951 399 VNVLRIGVSVGVEVDLPITTSNYLCKI 425 (433)
Q Consensus 399 ~e~~G~G~~l~~~~~~~~~l~~ai~~i 425 (433)
.+.|.|..++..+++.+.+.++|.++
T Consensus 297 -~~~g~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 297 -EKAGAAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp -HHTTSEEECCGGGCCHHHHHHHHHTC
T ss_pred -HhCCcEEEeccccCCHHHHHHHHHhc
Confidence 59999999988777789999999988
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.67 E-value=2e-15 Score=135.28 Aligned_cols=117 Identities=5% Similarity=0.018 Sum_probs=89.0
Q ss_pred CeEEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHh-CCCCeEEeCcccHh-hhhcC
Q 013951 280 SSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERI-KGRGLLIRGWAPQV-LILSH 357 (433)
Q Consensus 280 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq~-~lL~~ 357 (433)
.+.|+|++|..-. ......+++++.... ++.+.++.+.. ..+.++... ..+|+.+..++++. ++|..
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~--------~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~ 225 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNP--------NLKKLQKFAKLHNNIRLFIDHENIAKLMNE 225 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCT--------THHHHHHHHHTCSSEEEEESCSCHHHHHHT
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCch--------HHHHHHHHHhhCCCEEEEeCHHHHHHHHHH
Confidence 4589999997532 234556778877654 57777766542 112222211 24589999999886 59988
Q ss_pred CCceeeecccchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeee
Q 013951 358 PAVGGFLTHCGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVE 411 (433)
Q Consensus 358 ~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~ 411 (433)
+++ +||+|| +|++|+++.|+|+|++|...+|..||..+ ++.|+++.+...
T Consensus 226 aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~~~ 275 (282)
T 3hbm_A 226 SNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYKYL 275 (282)
T ss_dssp EEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECGGG
T ss_pred CCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcchh
Confidence 888 999999 89999999999999999999999999999 599999988753
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.65 E-value=2.1e-16 Score=135.84 Aligned_cols=132 Identities=11% Similarity=0.019 Sum_probs=97.5
Q ss_pred CCCeEEEEeeCCCcCCChhhHHHH-----HHHHHhCC-CCEEEEEeCCcchhhhhhhhchhhHHHHh-------------
Q 013951 278 QPSSVVYVCLGSICNLPSSQLIEL-----GLGLEASN-KPFVWVIRGVSKLEALEKWLVQENFEERI------------- 338 (433)
Q Consensus 278 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~p~~~~~~~------------- 338 (433)
+++++|||+.||.... .+.+..+ ++++.+.+ .++++.+|..... ..+.+....
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhcccccccccccc
Confidence 3456899999997322 2333333 47888877 7999999876420 001110010
Q ss_pred --------------CCCCeEEeCcccHh-hhhc-CCCceeeecccchhhHHHHHHcCCcEEecccc----cccchhHHHh
Q 013951 339 --------------KGRGLLIRGWAPQV-LILS-HPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF----ADQFCNEKLI 398 (433)
Q Consensus 339 --------------~~~nv~~~~~~pq~-~lL~-~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~----~DQ~~na~~v 398 (433)
..-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 01245677888775 7999 9999 99999999999999999999999974 3699999999
Q ss_pred hhhccceEEeeeeccCCcccccchhhc
Q 013951 399 VNVLRIGVSVGVEVDLPITTSNYLCKI 425 (433)
Q Consensus 399 ~e~~G~G~~l~~~~~~~~~l~~ai~~i 425 (433)
++.|+|+.+ +.+.|.++|.++
T Consensus 176 -~~~G~~~~~-----~~~~L~~~i~~l 196 (224)
T 2jzc_A 176 -VELGYVWSC-----APTETGLIAGLR 196 (224)
T ss_dssp -HHHSCCCEE-----CSCTTTHHHHHH
T ss_pred -HHCCCEEEc-----CHHHHHHHHHHH
Confidence 599999765 678899999887
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.35 E-value=3.4e-11 Score=113.86 Aligned_cols=130 Identities=17% Similarity=0.141 Sum_probs=85.2
Q ss_pred CeEEEEeeCCCcCCChhhHHHHHHHHHhC-----CCCEEEEEeCCcchhhhhhhhchhhHHHHh-CCCCeEEeCcccH--
Q 013951 280 SSVVYVCLGSICNLPSSQLIELGLGLEAS-----NKPFVWVIRGVSKLEALEKWLVQENFEERI-KGRGLLIRGWAPQ-- 351 (433)
Q Consensus 280 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq-- 351 (433)
+++|+++.|...... .+..++++++.. +.++++..+.+.. +-+.+++.. ..++|.+.+++++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV--------VREAVFPVLKGVRNFVLLDPLEYGS 267 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH--------HHHHHHHHhccCCCEEEECCCCHHH
Confidence 447777777553221 455666666542 4455544453321 001121111 2368998866555
Q ss_pred -hhhhcCCCceeeecccchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 352 -VLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 352 -~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
..+++.+++ ||+.+| |.+.||+++|+|+|+.+..+++.. ++ +.|.|+.++ .+.+.+.++|.++++|++
T Consensus 268 ~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~-~~g~g~lv~---~d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 268 MAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GL-KAGILKLAG---TDPEGVYRVVKGLLENPE 336 (376)
T ss_dssp HHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HH-HHTSEEECC---SCHHHHHHHHHHHHTCHH
T ss_pred HHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hh-cCCceEECC---CCHHHHHHHHHHHHhChH
Confidence 578888888 999884 446699999999999887666665 33 568888775 388999999999998864
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.26 E-value=1.7e-10 Score=109.30 Aligned_cols=327 Identities=12% Similarity=0.042 Sum_probs=169.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCC-EEEEEECCcchhhhHHHHHHhhhCCCCeEE-EEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGA-IVTIVTTPVNAARFKTVIARAIKSGLQIRL-IEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH-~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~ 85 (433)
+||++++ +..++...+..|+++|.++|+ ++.++.+........+..... ++.+ ..++. ...
T Consensus 1 mkIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-------~~~---- 63 (384)
T 1vgv_A 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLF-----SIVPDYDLNI-------MQP---- 63 (384)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHHH-----TCCCSEECCC-------CST----
T ss_pred CeEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHHc-----CCCCCcceec-------CCC----
Confidence 4788876 456778888999999999995 887765543322222222221 3322 22221 000
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCC---CcchHHHHHHcCCCcEEEecchHHHHHHHhhhhccc
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMC---FPWTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGVSK 162 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~---~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~ 162 (433)
...... ........+.+++++ .+||+|++... ...+..+|+..|+|++.+..... .
T Consensus 64 ----~~~~~~---~~~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~----------- 122 (384)
T 1vgv_A 64 ----GQGLTE---ITCRILEGLKPILAE--FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-T----------- 122 (384)
T ss_dssp ----TSCHHH---HHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-C-----------
T ss_pred ----CccHHH---HHHHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-c-----------
Confidence 011111 112234567788888 89999998532 12445677888999876422100 0
Q ss_pred cCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHh-hcC-CcE
Q 013951 163 VHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKK-AKQ-GKV 240 (433)
Q Consensus 163 ~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~-~~~-~~~ 240 (433)
. .... .. .....+... .+..+.++..+-..-+ .+.+ ..+ .++
T Consensus 123 ---------~-----~~~~-------~~--------~~~~~~~~~--~~~~d~ii~~s~~~~~-----~l~~~g~~~~~i 166 (384)
T 1vgv_A 123 ---------G-----DLYS-------PW--------PEEANRTLT--GHLAMYHFSPTETSRQ-----NLLRENVADSRI 166 (384)
T ss_dssp ---------S-----CTTS-------ST--------THHHHHHHH--HTTCSEEEESSHHHHH-----HHHHTTCCGGGE
T ss_pred ---------c-----cccC-------CC--------chHhhHHHH--HhhccEEEcCcHHHHH-----HHHHcCCChhhE
Confidence 0 0000 00 011111110 1224555555533221 1111 121 357
Q ss_pred EEeCcCCCCCCCCccccccCCCCCCCchhhhhhhc-cCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhC-----CCCEEE
Q 013951 241 WCIGPASLCNKEPIDKAERGKTASIDVPECLTWLD-SQQPSSVVYVCLGSICNLPSSQLIELGLGLEAS-----NKPFVW 314 (433)
Q Consensus 241 ~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~ 314 (433)
..+|.-....... .. ...........++.+.+. -.+++++++++.|...... +.+..+++++... +.++++
T Consensus 167 ~vi~n~~~d~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i 243 (384)
T 1vgv_A 167 FITGNTVIDALLW-VR-DQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVY 243 (384)
T ss_dssp EECCCHHHHHHHH-HH-HHTTTCHHHHHHHHTTCTTCCTTSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEeCChHHHHHHh-hh-hccccchhhhHHHHHhccccCCCCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEE
Confidence 7776321100000 00 000000000012222222 1123557888888765322 3455566665542 345555
Q ss_pred EEeCCcchhhhhhhhchhhHHHHh-CCCCeEEeCcccH---hhhhcCCCceeeecccchhhHHHHHHcCCcEEecccccc
Q 013951 315 VIRGVSKLEALEKWLVQENFEERI-KGRGLLIRGWAPQ---VLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLFAD 390 (433)
Q Consensus 315 ~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq---~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~D 390 (433)
..+.+.. +-+.+++.. ..+||.+.+++++ ..+++.+++ +|+.+| |.+.||+++|+|+|+.+..++
T Consensus 244 ~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~ 312 (384)
T 1vgv_A 244 PVHLNPN--------VREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTE 312 (384)
T ss_dssp ECCBCHH--------HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCS
T ss_pred EcCCCHH--------HHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCC
Confidence 3333210 111121211 2368998776664 557888998 998875 348899999999999987444
Q ss_pred cchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 391 QFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 391 Q~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
.. .++ +.|.|+.++. +.+.+.++|.++++|++
T Consensus 313 ~~----e~v-~~g~g~lv~~---d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 313 RP----EAV-TAGTVRLVGT---DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp CH----HHH-HHTSEEEECS---SHHHHHHHHHHHHHCHH
T ss_pred cc----hhh-hCCceEEeCC---CHHHHHHHHHHHHhChH
Confidence 33 343 5678988865 78999999999998864
No 27
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.24 E-value=2.5e-10 Score=108.50 Aligned_cols=329 Identities=11% Similarity=0.022 Sum_probs=171.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEECCcchhhhHHHHHHhhhCCCCeEE-EEecCCCccCCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQH-GAIVTIVTTPVNAARFKTVIARAIKSGLQIRL-IEIQFPWQEAGIPEGC 82 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~ 82 (433)
+.++||++++ +++....=+..|.++|.++ |+++.++.+....+......+.. ++.. +.+ ++-..
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~-----~i~~~~~l-------~~~~~- 88 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELF-----SITPDFDL-------NIMEP- 88 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHT-----TCCCSEEC-------CCCCT-
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhc-----CCCCceee-------ecCCC-
Confidence 5567898888 8888888899999999997 89987666654332222222111 2210 011 11000
Q ss_pred CCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECC--CC-cchHHHHHHcCCCcEEEecchHHHHHHHhhhh
Q 013951 83 ENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDM--CF-PWTVDTAAKFNVPRIIFHGFSCFCLFCHHLLG 159 (433)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~--~~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (433)
... ...........+.+++++ .+||+|++-. .. ..+..+|.++|||++.+.... .
T Consensus 89 -------~~~---~~~~~~~~~~~l~~~l~~--~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag~-r--------- 146 (396)
T 3dzc_A 89 -------GQT---LNGVTSKILLGMQQVLSS--EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGL-R--------- 146 (396)
T ss_dssp -------TCC---HHHHHHHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCCC-C---------
T ss_pred -------CCC---HHHHHHHHHHHHHHHHHh--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-c---------
Confidence 011 111223455678888888 8999999733 22 245678899999977542110 0
Q ss_pred ccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHh-hcC-
Q 013951 160 VSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKK-AKQ- 237 (433)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~-~~~- 237 (433)
.. ... .....+..+.+.. ...+.++..+-..- +++.+ -.+
T Consensus 147 -----------s~-----~~~---------------~~~~~~~~r~~~~--~~a~~~~~~se~~~-----~~l~~~G~~~ 188 (396)
T 3dzc_A 147 -----------TG-----NIY---------------SPWPEEGNRKLTA--ALTQYHFAPTDTSR-----ANLLQENYNA 188 (396)
T ss_dssp -----------CS-----CTT---------------SSTTHHHHHHHHH--HTCSEEEESSHHHH-----HHHHHTTCCG
T ss_pred -----------cc-----ccc---------------cCCcHHHHHHHHH--HhcCEEECCCHHHH-----HHHHHcCCCc
Confidence 00 000 0001122222211 22344455443321 11211 122
Q ss_pred CcEEEeC-cCCCCCCCCccccccCCCCCCCchhhhhhhcc-CCCCeEEEEeeCCCcCCChhhHHHHHHHHHhC-----CC
Q 013951 238 GKVWCIG-PASLCNKEPIDKAERGKTASIDVPECLTWLDS-QQPSSVVYVCLGSICNLPSSQLIELGLGLEAS-----NK 310 (433)
Q Consensus 238 ~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~ 310 (433)
.++..|| |.......... .........+++.+-+.. .+++++|+++.+-...... .+..++++++.. +.
T Consensus 189 ~ki~vvGn~~~d~~~~~~~---~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~ 264 (396)
T 3dzc_A 189 ENIFVTGNTVIDALLAVRE---KIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGG-GFERICQALITTAEQHPEC 264 (396)
T ss_dssp GGEEECCCHHHHHHHHHHH---HHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTE
T ss_pred CcEEEECCcHHHHHHHhhh---hcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCc
Confidence 3688888 33211000000 000000000122222221 1235577777532222222 356667776543 45
Q ss_pred CEEEEEeCCcchhhhhhhhchhhHHHH-hCCCCeEEeCccc---HhhhhcCCCceeeecccchhhHHHHHHcCCcEEecc
Q 013951 311 PFVWVIRGVSKLEALEKWLVQENFEER-IKGRGLLIRGWAP---QVLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWP 386 (433)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~p~~~~~~-~~~~nv~~~~~~p---q~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P 386 (433)
++++..+.+.. +-+.+++. ...+|+.+.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|++.
T Consensus 265 ~~v~~~g~~~~--------~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~ 333 (396)
T 3dzc_A 265 QILYPVHLNPN--------VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMR 333 (396)
T ss_dssp EEEEECCBCHH--------HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECC
T ss_pred eEEEEeCCChH--------HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEcc
Confidence 56655443311 11112221 1246899877775 4567888888 999987 66679999999999975
Q ss_pred cccccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 387 LFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 387 ~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
-.++++ .++ +.|.++.+.. +.+.|.++|.++++|++
T Consensus 334 ~~~~~~----e~v-~~G~~~lv~~---d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 334 ETTERP----EAV-AAGTVKLVGT---NQQQICDALSLLLTDPQ 369 (396)
T ss_dssp SSCSCH----HHH-HHTSEEECTT---CHHHHHHHHHHHHHCHH
T ss_pred CCCcch----HHH-HcCceEEcCC---CHHHHHHHHHHHHcCHH
Confidence 555543 243 6688866653 67899999999998864
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.22 E-value=2.3e-09 Score=101.78 Aligned_cols=317 Identities=11% Similarity=0.020 Sum_probs=175.9
Q ss_pred CCcEEEEEcC--C--CCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCC
Q 013951 6 SQVHFLLLPY--L--APGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEG 81 (433)
Q Consensus 6 ~~~~il~~~~--~--~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (433)
+++||++++. + ..|.-.-+..|++.| +||+|++++............ ...++.+..++.. ..
T Consensus 3 ~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-------~~ 68 (394)
T 3okp_A 3 ASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD-----KTLDYEVIRWPRS-------VM 68 (394)
T ss_dssp -CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH-----TTCSSEEEEESSS-------SC
T ss_pred CCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc-----cccceEEEEcccc-------cc
Confidence 3568999875 2 467778899999999 799999999875543212221 2346777776521 00
Q ss_pred CCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchHHHHHHHhhhh
Q 013951 82 CENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFHGFSCFCLFCHHLLG 159 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (433)
... . .....+.+++++ .+||+|++..... ....+++.+++|.+.+.........
T Consensus 69 ------~~~--~--------~~~~~l~~~~~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------ 124 (394)
T 3okp_A 69 ------LPT--P--------TTAHAMAEIIRE--REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGW------ 124 (394)
T ss_dssp ------CSC--H--------HHHHHHHHHHHH--TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHH------
T ss_pred ------ccc--h--------hhHHHHHHHHHh--cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhh------
Confidence 000 1 234467788888 8999999875443 4566788999995443322211100
Q ss_pred ccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHhhc--C
Q 013951 160 VSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKKAK--Q 237 (433)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~--~ 237 (433)
.......... +...+..+.++..|....+ .+.+.+ .
T Consensus 125 ----------------------------------~~~~~~~~~~---~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~ 162 (394)
T 3okp_A 125 ----------------------------------SMLPGSRQSL---RKIGTEVDVLTYISQYTLR-----RFKSAFGSH 162 (394)
T ss_dssp ----------------------------------TTSHHHHHHH---HHHHHHCSEEEESCHHHHH-----HHHHHHCSS
T ss_pred ----------------------------------hhcchhhHHH---HHHHHhCCEEEEcCHHHHH-----HHHHhcCCC
Confidence 0000011222 2223456667776654322 122222 2
Q ss_pred CcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhC-----CCCE
Q 013951 238 GKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEAS-----NKPF 312 (433)
Q Consensus 238 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~ 312 (433)
.++..|..-.....-.. .......++.+-+...+ +..+++..|+... .+.+..++++++.+ +.++
T Consensus 163 ~~~~vi~ngv~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l 232 (394)
T 3okp_A 163 PTFEHLPSGVDVKRFTP-------ATPEDKSATRKKLGFTD-TTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQL 232 (394)
T ss_dssp SEEEECCCCBCTTTSCC-------CCHHHHHHHHHHTTCCT-TCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEE
T ss_pred CCeEEecCCcCHHHcCC-------CCchhhHHHHHhcCCCc-CceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEE
Confidence 46666653322111000 00000122333332222 2256677787632 33445555555432 3444
Q ss_pred EEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhh---hhcCCCceeeec-----------ccchhhHHHHHHc
Q 013951 313 VWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVL---ILSHPAVGGFLT-----------HCGWNSSLEGISA 378 (433)
Q Consensus 313 i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~---lL~~~~~~~~It-----------HGG~gs~~eal~~ 378 (433)
+ .+|.+.....++. +. ....+|+.+.+++|+.+ ++..+++ +|. -|.-+++.||+++
T Consensus 233 ~-i~G~g~~~~~l~~--~~-----~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~ 302 (394)
T 3okp_A 233 L-IVGSGRYESTLRR--LA-----TDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQAC 302 (394)
T ss_dssp E-EECCCTTHHHHHH--HT-----GGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHT
T ss_pred E-EEcCchHHHHHHH--HH-----hcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHc
Confidence 3 3444432211111 00 11247999999998655 6778888 775 5556789999999
Q ss_pred CCcEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 379 GVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 379 GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
|+|+|+.+. ......+ +. |.|..++. -+.+.+.++|.++++|++
T Consensus 303 G~PvI~~~~----~~~~e~i-~~-~~g~~~~~--~d~~~l~~~i~~l~~~~~ 346 (394)
T 3okp_A 303 GVPVIAGTS----GGAPETV-TP-ATGLVVEG--SDVDKLSELLIELLDDPI 346 (394)
T ss_dssp TCCEEECSS----TTGGGGC-CT-TTEEECCT--TCHHHHHHHHHHHHTCHH
T ss_pred CCCEEEeCC----CChHHHH-hc-CCceEeCC--CCHHHHHHHHHHHHhCHH
Confidence 999999664 3444455 34 47877764 367899999999998864
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.21 E-value=9.2e-10 Score=104.72 Aligned_cols=321 Identities=12% Similarity=0.009 Sum_probs=168.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEE-EEecCCCccCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRL-IEIQFPWQEAGIPEG 81 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~ 81 (433)
|+++||++++ +++....=+..|.++|.++ |+++.++.+....+......+. .++.. +.+ ++-..
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~-----~~i~~~~~l-------~v~~~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI-----FDIKPDIDL-------DIMKK 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH-----TTCCCSEEC-------CCCC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh-----cCCCCCccc-------ccCCC
Confidence 4556899888 7777777789999999988 6888766655322122222211 12211 111 11000
Q ss_pred CCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCC--C-cchHHHHHHcCCCcEEEecchHHHHHHHhhh
Q 013951 82 CENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMC--F-PWTVDTAAKFNVPRIIFHGFSCFCLFCHHLL 158 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~--~-~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 158 (433)
.... ..........+.+++++ .+||+|++-.- . .++..+|.++|||++.+.... ..+
T Consensus 92 --------~~~~---~~~~~~~~~~l~~~l~~--~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~agl-rs~------ 151 (403)
T 3ot5_A 92 --------GQTL---AEITSRVMNGINEVIAA--ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAGL-RTW------ 151 (403)
T ss_dssp --------CCCH---HHHHHHHHHHHHHHHHH--HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCC-CCS------
T ss_pred --------CCCH---HHHHHHHHHHHHHHHHH--cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEECCc-ccc------
Confidence 0011 12233455678888888 89999997332 2 245788999999986542110 000
Q ss_pred hccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHh-hc-
Q 013951 159 GVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKK-AK- 236 (433)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~-~~- 236 (433)
.... .+ ..+..+..... ..+.++..+-..- +++.+ -.
T Consensus 152 ------------~~~~---~~-------------------p~~~~r~~~~~--~a~~~~~~se~~~-----~~l~~~Gi~ 190 (403)
T 3ot5_A 152 ------------NKYS---PF-------------------PEEMNRQLTGV--MADIHFSPTKQAK-----ENLLAEGKD 190 (403)
T ss_dssp ------------CTTS---ST-------------------THHHHHHHHHH--HCSEEEESSHHHH-----HHHHHTTCC
T ss_pred ------------cccc---CC-------------------cHHHHHHHHHH--hcCEEECCCHHHH-----HHHHHcCCC
Confidence 0000 00 01222221111 1333444443221 11211 22
Q ss_pred CCcEEEeCc-CCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHh-----CCC
Q 013951 237 QGKVWCIGP-ASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEA-----SNK 310 (433)
Q Consensus 237 ~~~~~~vGp-l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~ 310 (433)
+.++..+|. ....... . ... ....+..+.+ +++++++++.|....... .+..+++++.. .+.
T Consensus 191 ~~~i~vvGn~~~D~~~~-----~-~~~--~~~~~~~~~l---~~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~ 258 (403)
T 3ot5_A 191 PATIFVTGNTAIDALKT-----T-VQK--DYHHPILENL---GDNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDT 258 (403)
T ss_dssp GGGEEECCCHHHHHHHH-----H-SCT--TCCCHHHHSC---TTCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTE
T ss_pred cccEEEeCCchHHHHHh-----h-hhh--hcchHHHHhc---cCCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCc
Confidence 246888883 3211000 0 000 0011222222 335578787664322111 24556666543 244
Q ss_pred CEEEEEeCCcchhhhhhhhchhhHHHHh-CCCCeEEeCcccH---hhhhcCCCceeeecccchhhHHHHHHcCCcEEecc
Q 013951 311 PFVWVIRGVSKLEALEKWLVQENFEERI-KGRGLLIRGWAPQ---VLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWP 386 (433)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq---~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P 386 (433)
++++..+.+.. +-+.+++.. ..+|+.+.+++++ ..+++.+++ +|+-.|..+ .||.++|+|+|++|
T Consensus 259 ~~v~~~~~~~~--------~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~ 327 (403)
T 3ot5_A 259 ELVYPMHLNPA--------VREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLR 327 (403)
T ss_dssp EEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECC
T ss_pred eEEEecCCCHH--------HHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEec
Confidence 56665443311 111111111 2468999998864 457778887 998875323 69999999999997
Q ss_pred cccccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 387 LFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 387 ~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
-.++++. ++ +.|.|+.+.. +.+.+.++|.++|+|++
T Consensus 328 ~~~~~~e----~v-~~g~~~lv~~---d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 328 DTTERPE----GI-EAGTLKLIGT---NKENLIKEALDLLDNKE 363 (403)
T ss_dssp SSCSCHH----HH-HHTSEEECCS---CHHHHHHHHHHHHHCHH
T ss_pred CCCcchh----he-eCCcEEEcCC---CHHHHHHHHHHHHcCHH
Confidence 6666654 33 6788887763 78899999999998764
No 30
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.17 E-value=1e-09 Score=105.89 Aligned_cols=342 Identities=12% Similarity=0.065 Sum_probs=172.5
Q ss_pred CCCcEEEEEcC-----------CCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCC
Q 013951 5 ASQVHFLLLPY-----------LAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPW 73 (433)
Q Consensus 5 ~~~~~il~~~~-----------~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 73 (433)
.+++||++++. ...|+-..+..||++|.++||+|++++......... ......++.+..++...
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-----~~~~~~~v~v~~~~~~~ 92 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE-----IVRVAENLRVINIAAGP 92 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS-----EEEEETTEEEEEECCSC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc-----cccccCCeEEEEecCCC
Confidence 45789999995 236788889999999999999999998764321100 00011256676665311
Q ss_pred ccCCCCCCCCCCCCCCCccHHHHHHHHHHhHHHHHHH-HHhCCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchHH
Q 013951 74 QEAGIPEGCENCDLLPTTDFARFMKSLHMLQQPFENL-FKEKTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFHGFSCF 150 (433)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~pD~vI~D~~~~--~~~~~A~~~giP~v~~~~~~~~ 150 (433)
.. . .....+.... ..+...+.+. ++.. .+||+|++..... .+..+++.+++|+|........
T Consensus 93 ~~--------~---~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~ 157 (438)
T 3c48_A 93 YE--------G---LSKEELPTQL---AAFTGGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA 157 (438)
T ss_dssp SS--------S---CCGGGGGGGH---HHHHHHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred cc--------c---cchhHHHHHH---HHHHHHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcc
Confidence 00 0 0001111111 1111222333 4441 3599999875332 3445677889999876444322
Q ss_pred HHHHHhhhhccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHH
Q 013951 151 CLFCHHLLGVSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIE 230 (433)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~ 230 (433)
.. .. .+.. .. ... ....... ........+.++..|....+
T Consensus 158 ~~------------------~~-----~~~~------~~---~~~-~~~~~~~--~~~~~~~~d~ii~~s~~~~~----- 197 (438)
T 3c48_A 158 VK------------------NS-----YRDD------SD---TPE-SEARRIC--EQQLVDNADVLAVNTQEEMQ----- 197 (438)
T ss_dssp HH------------------SC-----C----------C---CHH-HHHHHHH--HHHHHHHCSEEEESSHHHHH-----
T ss_pred cc------------------cc-----cccc------cC---Ccc-hHHHHHH--HHHHHhcCCEEEEcCHHHHH-----
Confidence 10 00 0000 00 000 0001111 11223456677777754332
Q ss_pred HHHhhc--C-CcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHh
Q 013951 231 NYKKAK--Q-GKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEA 307 (433)
Q Consensus 231 ~~~~~~--~-~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~ 307 (433)
.+.+.+ + .++..|..-.....-. . ........+.+-+.-.. +..+++..|+... .+.+..++++++.
T Consensus 198 ~~~~~~g~~~~k~~vi~ngvd~~~~~------~-~~~~~~~~~r~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~ 267 (438)
T 3c48_A 198 DLMHHYDADPDRISVVSPGADVELYS------P-GNDRATERSRRELGIPL-HTKVVAFVGRLQP--FKGPQVLIKAVAA 267 (438)
T ss_dssp HHHHHHCCCGGGEEECCCCCCTTTSC------C-C----CHHHHHHTTCCS-SSEEEEEESCBSG--GGCHHHHHHHHHH
T ss_pred HHHHHhCCChhheEEecCCccccccC------C-cccchhhhhHHhcCCCC-CCcEEEEEeeecc--cCCHHHHHHHHHH
Confidence 122212 1 3566666332211100 0 00000011222232222 2356677787643 2344555555543
Q ss_pred C-----CCCE-EEEEeC----CcchhhhhhhhchhhHHHHhCCCCeEEeCcccHh---hhhcCCCceeeecc----cchh
Q 013951 308 S-----NKPF-VWVIRG----VSKLEALEKWLVQENFEERIKGRGLLIRGWAPQV---LILSHPAVGGFLTH----CGWN 370 (433)
Q Consensus 308 ~-----~~~~-i~~~~~----~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~---~lL~~~~~~~~ItH----GG~g 370 (433)
. +..+ ++.+|. +..... +-+-..+....+||.+.+++|+. .++..+++ +|.- |.-.
T Consensus 268 l~~~~p~~~~~l~i~G~~~~~g~~~~~-----l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~ 340 (438)
T 3c48_A 268 LFDRDPDRNLRVIICGGPSGPNATPDT-----YRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGL 340 (438)
T ss_dssp HHHHCTTCSEEEEEECCBC------CH-----HHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCH
T ss_pred HHhhCCCcceEEEEEeCCCCCCcHHHH-----HHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCch
Confidence 2 1233 334444 111111 11111111135789999999874 57778888 6643 3345
Q ss_pred hHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 371 SSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 371 s~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
++.||+++|+|+|+.. .......+ +..+.|+.++. -+.+.+.++|.++++|++
T Consensus 341 ~~~Eama~G~PvI~~~----~~~~~e~i-~~~~~g~~~~~--~d~~~la~~i~~l~~~~~ 393 (438)
T 3c48_A 341 VAMEAQASGTPVIAAR----VGGLPIAV-AEGETGLLVDG--HSPHAWADALATLLDDDE 393 (438)
T ss_dssp HHHHHHHTTCCEEEES----CTTHHHHS-CBTTTEEEESS--CCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHcCCCEEecC----CCChhHHh-hCCCcEEECCC--CCHHHHHHHHHHHHcCHH
Confidence 8999999999999865 34566667 57778888764 367889999999998764
No 31
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.08 E-value=3.6e-08 Score=92.86 Aligned_cols=319 Identities=13% Similarity=0.035 Sum_probs=165.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHC-C-CEEEEEECCcchhhhHHHHHHhhhCCCCeEE-EEecCCCccCCCCCCCC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQH-G-AIVTIVTTPVNAARFKTVIARAIKSGLQIRL-IEIQFPWQEAGIPEGCE 83 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~r-G-H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~ 83 (433)
++||++++ ++.++......++++|.++ | |+|.++++....+...+..... ++.. ..+. ...
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-------~~~--- 71 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQHRQMLDQVLSIF-----GITPDFDLN-------IMK--- 71 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSSSHHHHHHHHHH-----TCCCSEECC-------CCC---
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCCHHHHHHHHHHc-----CCCCccccc-------cCC---
Confidence 46899998 5577888889999999987 5 8988887664433222221111 2221 1111 000
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc---chHHHHHHcCCCcEEEecchHHHHHHHhhhhc
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP---WTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGV 160 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~---~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~ 160 (433)
+..... .........+.+++++ .+||+|++..... .+..++...|+|++.+.... .
T Consensus 72 -----~~~~~~---~~~~~~~~~l~~~l~~--~~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~---------- 130 (375)
T 3beo_A 72 -----DRQTLI---DITTRGLEGLDKVMKE--AKPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-R---------- 130 (375)
T ss_dssp -----TTCCHH---HHHHHHHHHHHHHHHH--HCCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-C----------
T ss_pred -----CcccHH---HHHHHHHHHHHHHHHH--hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-c----------
Confidence 001110 0111223456777888 8999999954322 33467788999988532110 0
Q ss_pred cccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHh-hcC-C
Q 013951 161 SKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKK-AKQ-G 238 (433)
Q Consensus 161 ~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~-~~~-~ 238 (433)
.. .. .. .. .....+.... +..+.++..+...-+ .+.+ ..+ .
T Consensus 131 ----------~~----~~-~~-------~~--------~~~~~~~~~~--~~~d~ii~~s~~~~~-----~~~~~g~~~~ 173 (375)
T 3beo_A 131 ----------TW----DK-YS-------PY--------PEEMNRQLTG--VMADLHFSPTAKSAT-----NLQKENKDES 173 (375)
T ss_dssp ----------CS----CT-TS-------ST--------THHHHHHHHH--HHCSEEEESSHHHHH-----HHHHTTCCGG
T ss_pred ----------cc----cc-cC-------CC--------hhHhhhhHHh--hhhheeeCCCHHHHH-----HHHHcCCCcc
Confidence 00 00 00 00 0111111111 124455555543222 1111 122 3
Q ss_pred cEEEeCcC-CCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhC-----CCCE
Q 013951 239 KVWCIGPA-SLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEAS-----NKPF 312 (433)
Q Consensus 239 ~~~~vGpl-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~ 312 (433)
++..||.- ..... ..... ....++.+-+ +++++++++.|...... +.+..++++++.. +.++
T Consensus 174 ~i~vi~n~~~d~~~------~~~~~--~~~~~~~~~~---~~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~ 241 (375)
T 3beo_A 174 RIFITGNTAIDALK------TTVKE--TYSHPVLEKL---GNNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQV 241 (375)
T ss_dssp GEEECCCHHHHHHH------HHCCS--SCCCHHHHTT---TTSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEE
T ss_pred cEEEECChhHhhhh------hhhhh--hhhHHHHHhc---cCCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEE
Confidence 57777632 11000 00000 0011122112 23457777888754321 3456667776542 3444
Q ss_pred EEEEeCCcchhhhhhhhchhhHHHHh-CCCCeEEeCcccH---hhhhcCCCceeeecccchhhHHHHHHcCCcEEecccc
Q 013951 313 VWVIRGVSKLEALEKWLVQENFEERI-KGRGLLIRGWAPQ---VLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF 388 (433)
Q Consensus 313 i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~pq---~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~ 388 (433)
++ +.+.... +-+.+++.. ..+||.+.+++++ ..+++.+++ +|+..| +.+.||+++|+|+|+....
T Consensus 242 i~--~~g~~~~------~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~ 310 (375)
T 3beo_A 242 VY--PVHMNPV------VRETANDILGDYGRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDT 310 (375)
T ss_dssp EE--ECCSCHH------HHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSC
T ss_pred EE--eCCCCHH------HHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCC
Confidence 33 4332111 111122211 2368999777765 467888888 898864 4588999999999998543
Q ss_pred cccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 389 ADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 389 ~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
+.. ..+. +.|.|+.++. +.+.+.++|.++++|++
T Consensus 311 ~~~----~e~v-~~g~g~~v~~---d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 311 TER----PEGI-EAGTLKLAGT---DEETIFSLADELLSDKE 344 (375)
T ss_dssp CSC----HHHH-HTTSEEECCS---CHHHHHHHHHHHHHCHH
T ss_pred CCC----ceee-cCCceEEcCC---CHHHHHHHHHHHHhChH
Confidence 333 2243 5678888763 77899999999998864
No 32
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.06 E-value=5.8e-09 Score=99.87 Aligned_cols=81 Identities=9% Similarity=-0.112 Sum_probs=62.0
Q ss_pred CCCCeEEeCccc---H---hhhhcCCCceeeeccc----chhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEe
Q 013951 339 KGRGLLIRGWAP---Q---VLILSHPAVGGFLTHC----GWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSV 408 (433)
Q Consensus 339 ~~~nv~~~~~~p---q---~~lL~~~~~~~~ItHG----G~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l 408 (433)
..+||.+.+|++ + ..++..+++ +|.-. .-.++.||+++|+|+|+... ..+...+ +..+.|..+
T Consensus 291 ~~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~ 363 (416)
T 2x6q_A 291 EDYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLV 363 (416)
T ss_dssp TCTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEE
T ss_pred CCCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEE
Confidence 357999988776 2 347778888 66543 45688999999999999764 4566667 577788887
Q ss_pred eeeccCCcccccchhhcccccc
Q 013951 409 GVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 409 ~~~~~~~~~l~~ai~~il~~~~ 430 (433)
+ +.+.+.++|.++++|++
T Consensus 364 ~----d~~~la~~i~~ll~~~~ 381 (416)
T 2x6q_A 364 R----DANEAVEVVLYLLKHPE 381 (416)
T ss_dssp S----SHHHHHHHHHHHHHCHH
T ss_pred C----CHHHHHHHHHHHHhCHH
Confidence 6 77899999999998764
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.05 E-value=3.4e-08 Score=94.03 Aligned_cols=313 Identities=12% Similarity=0.041 Sum_probs=163.8
Q ss_pred CCcEEEEEcCC---C-CCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCC
Q 013951 6 SQVHFLLLPYL---A-PGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEG 81 (433)
Q Consensus 6 ~~~~il~~~~~---~-~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (433)
+++||++++.. . .|.-.-+..++++|.++||+|++++............ .. .+ .+..++ ..
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~----~~-~~-~~~~~~---------~~ 83 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYV----VS-GG-KAVPIP---------YN 83 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTE----EE-CC-CCC--------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCccc----cc-CC-cEEecc---------cc
Confidence 46899999842 2 4556789999999999999999999874322000000 00 00 011111 00
Q ss_pred CCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc--chHHHHHHcCCCcEEEecchHHHHHHHhhhh
Q 013951 82 CENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFHGFSCFCLFCHHLLG 159 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 159 (433)
. . ...+ .........+.+++++ .+||+|++..... .+..+++..++|+|...........
T Consensus 84 ~-~--------~~~~-~~~~~~~~~l~~~l~~--~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~------ 145 (406)
T 2gek_A 84 G-S--------VARL-RFGPATHRKVKKWIAE--GDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSL------ 145 (406)
T ss_dssp -----------------CCHHHHHHHHHHHHH--HCCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHH------
T ss_pred C-C--------cccc-cccHHHHHHHHHHHHh--cCCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhh------
Confidence 0 0 0000 0000123466777887 7999999876554 3456677789999885433110000
Q ss_pred ccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHhhcC-C
Q 013951 160 VSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKKAKQ-G 238 (433)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~-~ 238 (433)
. .......+.......+.++..|....+ .+.+.++ .
T Consensus 146 --------------------------~------------~~~~~~~~~~~~~~~d~ii~~s~~~~~-----~~~~~~~~~ 182 (406)
T 2gek_A 146 --------------------------T------------LSVFQGILRPYHEKIIGRIAVSDLARR-----WQMEALGSD 182 (406)
T ss_dssp --------------------------H------------HHHHHSTTHHHHTTCSEEEESSHHHHH-----HHHHHHSSC
T ss_pred --------------------------h------------HHHHHHHHHHHHhhCCEEEECCHHHHH-----HHHHhcCCC
Confidence 0 000000011223456666666644322 1222333 2
Q ss_pred cEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCC-cCCChhhHHHHHHHHHhC----CCCEE
Q 013951 239 KVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSI-CNLPSSQLIELGLGLEAS----NKPFV 313 (433)
Q Consensus 239 ~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~-~~~~~~~~~~~~~al~~~----~~~~i 313 (433)
++ .|..-..... .. ... .... +.. +..+++..|+. .. .+.+..+++++... +.--+
T Consensus 183 ~~-vi~~~v~~~~-----~~-~~~---~~~~----~~~---~~~~i~~~G~~~~~--~Kg~~~li~a~~~l~~~~~~~~l 243 (406)
T 2gek_A 183 AV-EIPNGVDVAS-----FA-DAP---LLDG----YPR---EGRTVLFLGRYDEP--RKGMAVLLAALPKLVARFPDVEI 243 (406)
T ss_dssp EE-ECCCCBCHHH-----HH-TCC---CCTT----CSC---SSCEEEEESCTTSG--GGCHHHHHHHHHHHHTTSTTCEE
T ss_pred cE-EecCCCChhh-----cC-CCc---hhhh----ccC---CCeEEEEEeeeCcc--ccCHHHHHHHHHHHHHHCCCeEE
Confidence 34 4442211000 00 000 0000 000 11455667876 32 23344555555443 22223
Q ss_pred EEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHh---hhhcCCCceeeec----ccchh-hHHHHHHcCCcEEec
Q 013951 314 WVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQV---LILSHPAVGGFLT----HCGWN-SSLEGISAGVQMLTW 385 (433)
Q Consensus 314 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~---~lL~~~~~~~~It----HGG~g-s~~eal~~GvP~v~~ 385 (433)
+.+|.+.. ..+.. +. .+. .+||.+.+++|+. .++..+++ +|. +.|.| ++.||+++|+|+|+.
T Consensus 244 ~i~G~~~~-~~l~~--~~----~~~-~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~ 313 (406)
T 2gek_A 244 LIVGRGDE-DELRE--QA----GDL-AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVAS 313 (406)
T ss_dssp EEESCSCH-HHHHH--HT----GGG-GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEEC
T ss_pred EEEcCCcH-HHHHH--HH----Hhc-cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEe
Confidence 44454432 11111 10 111 5789999999975 68888998 653 34444 899999999999997
Q ss_pred ccccccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 386 PLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 386 P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
+. ......+ +..+.|..++. -+.+.+.++|.++++|++
T Consensus 314 ~~----~~~~e~i-~~~~~g~~~~~--~d~~~l~~~i~~l~~~~~ 351 (406)
T 2gek_A 314 DL----DAFRRVL-ADGDAGRLVPV--DDADGMAAALIGILEDDQ 351 (406)
T ss_dssp CC----HHHHHHH-TTTTSSEECCT--TCHHHHHHHHHHHHHCHH
T ss_pred cC----CcHHHHh-cCCCceEEeCC--CCHHHHHHHHHHHHcCHH
Confidence 64 5566677 57778888764 366889999999998764
No 34
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.03 E-value=4.9e-08 Score=93.85 Aligned_cols=80 Identities=13% Similarity=0.017 Sum_probs=59.3
Q ss_pred CCeEEeCcccHhh---hhcCCCceeeec----ccchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeecc
Q 013951 341 RGLLIRGWAPQVL---ILSHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVD 413 (433)
Q Consensus 341 ~nv~~~~~~pq~~---lL~~~~~~~~It----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~ 413 (433)
+++.+.+|+|+.+ ++..+++ +|. -|--.++.||+++|+|+|+.. .......+ + .|.|..++. -
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~-~-~~~g~~~~~--~ 380 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDII-T-NETGILVKA--G 380 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHC-C-TTTCEEECT--T
T ss_pred CEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeE-E-cCceEEeCC--C
Confidence 6667788899865 6778888 663 233468999999999999864 44555555 3 468888775 3
Q ss_pred CCcccccchhhccc-ccc
Q 013951 414 LPITTSNYLCKISC-NSQ 430 (433)
Q Consensus 414 ~~~~l~~ai~~il~-~~~ 430 (433)
+.+.+.++|.++++ +++
T Consensus 381 d~~~la~~i~~ll~~~~~ 398 (439)
T 3fro_A 381 DPGELANAILKALELSRS 398 (439)
T ss_dssp CHHHHHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHhcCHH
Confidence 67899999999988 553
No 35
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.99 E-value=3.7e-09 Score=98.44 Aligned_cols=124 Identities=14% Similarity=0.142 Sum_probs=83.1
Q ss_pred EEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHh---hhhcCCCc
Q 013951 284 YVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQV---LILSHPAV 360 (433)
Q Consensus 284 ~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~---~lL~~~~~ 360 (433)
++..|+.. ..+.+..++++++..+.++++ +|.+...+.++ .+..+. .+||.+.+++|+. .++..+++
T Consensus 165 i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~~~~~l~------~~~~~~-~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 165 LLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAWEPEYFD------EITRRY-GSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp EEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCCCHHHHH------HHHHHH-TTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCcccHHHHH------HHHHHh-CCCEEEeccCCHHHHHHHHHhCCE
Confidence 44567764 345677788888877776555 45443221111 122222 3899999999986 68888888
Q ss_pred eeee--cc-----------cc-hhhHHHHHHcCCcEEecccccccchhHHHhhhh--ccceEEeeeeccCCcccccchhh
Q 013951 361 GGFL--TH-----------CG-WNSSLEGISAGVQMLTWPLFADQFCNEKLIVNV--LRIGVSVGVEVDLPITTSNYLCK 424 (433)
Q Consensus 361 ~~~I--tH-----------GG-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~--~G~G~~l~~~~~~~~~l~~ai~~ 424 (433)
+| +. -| -.++.||+++|+|+|+... ..+...+ +. -+.|+.++. +.+.+.++|.+
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~-~~~~~~~g~~~~~---d~~~l~~~i~~ 304 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIV-PSVGEVVGYGTDF---APDEARRTLAG 304 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHG-GGGEEECCSSSCC---CHHHHHHHHHT
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHh-cccCCCceEEcCC---CHHHHHHHHHH
Confidence 65 32 33 4578999999999999864 4466667 46 567766654 77888999988
Q ss_pred ccc
Q 013951 425 ISC 427 (433)
Q Consensus 425 il~ 427 (433)
+++
T Consensus 305 l~~ 307 (342)
T 2iuy_A 305 LPA 307 (342)
T ss_dssp SCC
T ss_pred HHH
Confidence 875
No 36
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.97 E-value=2e-08 Score=98.62 Aligned_cols=136 Identities=13% Similarity=0.077 Sum_probs=85.6
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCCC----C-EEEEEeCCcch--------hh----hhhhhchhhHHHHhCCCCeE
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASNK----P-FVWVIRGVSKL--------EA----LEKWLVQENFEERIKGRGLL 344 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~--------~~----~~~~~~p~~~~~~~~~~nv~ 344 (433)
.+++..|++. ....+..++++++.... . .++.+|+.... +. ... +-+...+....++|.
T Consensus 263 ~~i~~vGrl~--~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~--l~~~~~~~~l~~~V~ 338 (499)
T 2r60_A 263 PAIIASSRLD--QKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGK--IIELIDNNDCRGKVS 338 (499)
T ss_dssp CEEEECSCCC--GGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHH--HHHHHHHTTCBTTEE
T ss_pred cEEEEeecCc--cccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchHHHHH--HHHHHHhcCCCceEE
Confidence 4566778763 34557778888877532 2 35556652110 00 000 111111112357899
Q ss_pred EeCcccHhh---hhcCC----Cceeeecc----cchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeecc
Q 013951 345 IRGWAPQVL---ILSHP----AVGGFLTH----CGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVD 413 (433)
Q Consensus 345 ~~~~~pq~~---lL~~~----~~~~~ItH----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~ 413 (433)
+.+++|+.+ ++..+ ++ +|.- |--.++.||+++|+|+|+.. -......+ +....|..++. -
T Consensus 339 ~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v-~~~~~g~l~~~--~ 409 (499)
T 2r60_A 339 MFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEIL-DGGKYGVLVDP--E 409 (499)
T ss_dssp EEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHT-GGGTSSEEECT--T
T ss_pred ECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHh-cCCceEEEeCC--C
Confidence 999998654 66677 77 6632 33458899999999999875 34556666 46667888765 3
Q ss_pred CCcccccchhhcccccc
Q 013951 414 LPITTSNYLCKISCNSQ 430 (433)
Q Consensus 414 ~~~~l~~ai~~il~~~~ 430 (433)
+.+.+.++|.++++|++
T Consensus 410 d~~~la~~i~~ll~~~~ 426 (499)
T 2r60_A 410 DPEDIARGLLKAFESEE 426 (499)
T ss_dssp CHHHHHHHHHHHHSCHH
T ss_pred CHHHHHHHHHHHHhCHH
Confidence 67889999999998864
No 37
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.97 E-value=1.2e-08 Score=96.13 Aligned_cols=320 Identities=12% Similarity=0.027 Sum_probs=173.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
-.+|++++. |++-.+.=+..|.++|.++ ++..++.|..-.+ .........++++ +-+... +...
T Consensus 8 ~~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~---~~~~~~~~~~~~i-----~~~~~~--l~~~---- 71 (385)
T 4hwg_A 8 HMLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYA---YELNQVFFDDMGI-----RKPDYF--LEVA---- 71 (385)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHH---HHHTHHHHC-CCC-----CCCSEE--CCCC----
T ss_pred hhhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCC---hhHHHHHHhhCCC-----CCCcee--cCCC----
Confidence 356788877 9999999999999999887 9988887764322 1121111122222 111111 1110
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEEC--CCCcchHHHHHHcCCCcEEEecchHHHHHHHhhhhcccc
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISD--MCFPWTVDTAAKFNVPRIIFHGFSCFCLFCHHLLGVSKV 163 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D--~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 163 (433)
. .. .......+...+.+++++ .+||+|++- ....++..+|.++|||++.+.... .
T Consensus 72 -~---~~---~~~~~~~~~~~l~~~l~~--~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl-r------------- 128 (385)
T 4hwg_A 72 -A---DN---TAKSIGLVIEKVDEVLEK--EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN-R------------- 128 (385)
T ss_dssp -C---CC---SHHHHHHHHHHHHHHHHH--HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC-C-------------
T ss_pred -C---CC---HHHHHHHHHHHHHHHHHh--cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC-c-------------
Confidence 0 01 123333456678888888 899999863 333444889999999976542110 0
Q ss_pred CCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHH-hhcC-CcEE
Q 013951 164 HENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYK-KAKQ-GKVW 241 (433)
Q Consensus 164 ~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~-~~~~-~~~~ 241 (433)
.... .+ ..+..+.+... -.+.++..+-..- +++. .-.+ .++.
T Consensus 129 -------s~~~---~~-------------------pee~nR~~~~~--~a~~~~~~te~~~-----~~l~~~G~~~~~I~ 172 (385)
T 4hwg_A 129 -------CFDQ---RV-------------------PEEINRKIIDH--ISDVNITLTEHAR-----RYLIAEGLPAELTF 172 (385)
T ss_dssp -------CSCT---TS-------------------THHHHHHHHHH--HCSEEEESSHHHH-----HHHHHTTCCGGGEE
T ss_pred -------cccc---cC-------------------cHHHHHHHHHh--hhceeecCCHHHH-----HHHHHcCCCcCcEE
Confidence 0000 00 11122222111 1333444443221 1121 1222 4688
Q ss_pred EeC-cCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCC-hhhHHHHHHHHHhC----CCCEEEE
Q 013951 242 CIG-PASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLP-SSQLIELGLGLEAS----NKPFVWV 315 (433)
Q Consensus 242 ~vG-pl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~ 315 (433)
.+| |........... ....++.+-++-.+ ++.|+++.|...... .+.+..+++++... +..+|+.
T Consensus 173 vtGnp~~D~~~~~~~~--------~~~~~~~~~lgl~~-~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p 243 (385)
T 4hwg_A 173 KSGSHMPEVLDRFMPK--------ILKSDILDKLSLTP-KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFS 243 (385)
T ss_dssp ECCCSHHHHHHHHHHH--------HHHCCHHHHTTCCT-TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred EECCchHHHHHHhhhh--------cchhHHHHHcCCCc-CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 888 332110000000 00112222333222 458889988764433 34566777776643 5667776
Q ss_pred EeCCcchhhhhhhhchhhHHHH---h-CCCCeEEeCcccH---hhhhcCCCceeeecccchhhHHHHHHcCCcEEecccc
Q 013951 316 IRGVSKLEALEKWLVQENFEER---I-KGRGLLIRGWAPQ---VLILSHPAVGGFLTHCGWNSSLEGISAGVQMLTWPLF 388 (433)
Q Consensus 316 ~~~~~~~~~~~~~~~p~~~~~~---~-~~~nv~~~~~~pq---~~lL~~~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~ 388 (433)
..+.. . +.+++. . ..+|+.+.+.+++ ..+++.+++ +|+-.|. .+.||.+.|+|+|.++..
T Consensus 244 ~~p~~-~---------~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ 310 (385)
T 4hwg_A 244 THPRT-K---------KRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREA 310 (385)
T ss_dssp ECHHH-H---------HHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSS
T ss_pred CChHH-H---------HHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCC
Confidence 54211 0 111111 1 1368888666554 568888998 9998775 468999999999999875
Q ss_pred cccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 389 ADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 389 ~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
.+.+. .+ +.|.++.+.. +.+.+.++|.++|+|+.
T Consensus 311 ter~e----~v-~~G~~~lv~~---d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 311 HERPE----GM-DAGTLIMSGF---KAERVLQAVKTITEEHD 344 (385)
T ss_dssp CSCTH----HH-HHTCCEECCS---SHHHHHHHHHHHHTTCB
T ss_pred ccchh----hh-hcCceEEcCC---CHHHHHHHHHHHHhChH
Confidence 54232 33 6688877753 67899999999998864
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.85 E-value=5.3e-07 Score=84.66 Aligned_cols=133 Identities=14% Similarity=0.046 Sum_probs=88.8
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCCC----C-EEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccH-hhhh
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASNK----P-FVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQ-VLIL 355 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq-~~lL 355 (433)
.+++..|+... .+.+..++++++.... . -++.+|.+.. .. +.+-.+.....+|+.+.++..+ ..++
T Consensus 197 ~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~-~~-----~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (374)
T 2iw1_A 197 NLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKP-RK-----FEALAEKLGVRSNVHFFSGRNDVSELM 268 (374)
T ss_dssp EEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC-HH-----HHHHHHHHTCGGGEEEESCCSCHHHHH
T ss_pred eEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCH-HH-----HHHHHHHcCCCCcEEECCCcccHHHHH
Confidence 56677787643 3456777888877632 2 3444555432 11 1111111123478998888554 5588
Q ss_pred cCCCceeeec----ccchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 356 SHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 356 ~~~~~~~~It----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
..+++ +|. -|.-+++.||+++|+|+|+... ..+...+ ++.+.|..++. .-+.+.+.++|.++++|++
T Consensus 269 ~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~-~~~~~~l~~~i~~l~~~~~ 339 (374)
T 2iw1_A 269 AAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAE-PFSQEQLNEVLRKALTQSP 339 (374)
T ss_dssp HHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECS-SCCHHHHHHHHHHHHHCHH
T ss_pred HhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCC-CCCHHHHHHHHHHHHcChH
Confidence 88888 775 4667789999999999999764 4566778 58889988862 2367899999999998764
No 39
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.82 E-value=1.4e-07 Score=89.40 Aligned_cols=322 Identities=9% Similarity=0.033 Sum_probs=166.6
Q ss_pred CCcEEEEEcCCCC-CChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCC
Q 013951 6 SQVHFLLLPYLAP-GHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCEN 84 (433)
Q Consensus 6 ~~~~il~~~~~~~-GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (433)
.++++....+|.. |.-.-...||++|.++||+|++++...... .. ....++.+..++... .+ .
T Consensus 14 ~~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~-------~~~~~i~~~~~~~~~----~~----~ 77 (394)
T 2jjm_A 14 MKLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LN-------KVYPNIYFHEVTVNQ----YS----V 77 (394)
T ss_dssp -CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC------------CCCTTEEEECCCCC------------
T ss_pred heeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cc-------ccCCceEEEeccccc----cc----c
Confidence 3567777777765 455667899999999999999998753211 00 012245555443210 00 0
Q ss_pred CCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc---CCCcEEEecchHHHHHHHhhhh
Q 013951 85 CDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF---NVPRIIFHGFSCFCLFCHHLLG 159 (433)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~---giP~v~~~~~~~~~~~~~~~~~ 159 (433)
.....+ .+ .....+.+++++ .+||+|++..... ....++..+ ++|+|.......... .
T Consensus 78 ---~~~~~~-~~-----~~~~~l~~~l~~--~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~-----~- 140 (394)
T 2jjm_A 78 ---FQYPPY-DL-----ALASKMAEVAQR--ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDITV-----L- 140 (394)
T ss_dssp ---CCSCCH-HH-----HHHHHHHHHHHH--HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHHT-----T-
T ss_pred ---cccccc-cH-----HHHHHHHHHHHH--cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcccc-----c-
Confidence 000001 11 123456677777 8999999975433 223344443 599877543321110 0
Q ss_pred ccccCCCCCCCCCcccCCCCCCCccccccccCccCCCCcHHHHHHHHHHhcccccEEEEcChhhcchHHHHHHHhhc--C
Q 013951 160 VSKVHENVTSDSEYFNIPGLPDHIEFTKVQLLISKRDDDRKELREQILAADKKTYGAIINTFEELESPFIENYKKAK--Q 237 (433)
Q Consensus 160 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~--~ 237 (433)
+... .+....+ ...+..+.++..|....+ .+.+.+ +
T Consensus 141 ------------------~~~~----------------~~~~~~~---~~~~~ad~ii~~s~~~~~-----~~~~~~~~~ 178 (394)
T 2jjm_A 141 ------------------GSDP----------------SLNNLIR---FGIEQSDVVTAVSHSLIN-----ETHELVKPN 178 (394)
T ss_dssp ------------------TTCT----------------TTHHHHH---HHHHHSSEEEESCHHHHH-----HHHHHTCCS
T ss_pred ------------------CCCH----------------HHHHHHH---HHHhhCCEEEECCHHHHH-----HHHHhhCCc
Confidence 0000 0111221 123446666666644322 222222 2
Q ss_pred CcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhC----CCCEE
Q 013951 238 GKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEAS----NKPFV 313 (433)
Q Consensus 238 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i 313 (433)
.++..|..-....... . ....++.+-+...+ +..+++..|+... ...+..++++++.. +. -+
T Consensus 179 ~~~~vi~ngv~~~~~~---------~-~~~~~~~~~~~~~~-~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~-~l 244 (394)
T 2jjm_A 179 KDIQTVYNFIDERVYF---------K-RDMTQLKKEYGISE-SEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDA-KL 244 (394)
T ss_dssp SCEEECCCCCCTTTCC---------C-CCCHHHHHHTTCC----CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCC-EE
T ss_pred ccEEEecCCccHHhcC---------C-cchHHHHHHcCCCC-CCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCC-EE
Confidence 4677666332211100 0 01122222222111 2245566687643 33445555555442 33 34
Q ss_pred EEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccH-hhhhcCCCceeee----cccchhhHHHHHHcCCcEEecccc
Q 013951 314 WVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQ-VLILSHPAVGGFL----THCGWNSSLEGISAGVQMLTWPLF 388 (433)
Q Consensus 314 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq-~~lL~~~~~~~~I----tHGG~gs~~eal~~GvP~v~~P~~ 388 (433)
+.+|.+.....+.. ..+.....+||.+.++..+ ..++..+++ +| .-|.-+++.||+++|+|+|+...
T Consensus 245 ~i~G~g~~~~~l~~-----~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~- 316 (394)
T 2jjm_A 245 LLVGDGPEFCTILQ-----LVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRV- 316 (394)
T ss_dssp EEECCCTTHHHHHH-----HHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECC-
T ss_pred EEECCchHHHHHHH-----HHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecC-
Confidence 44554432111111 1110012467888777543 568888998 77 55666789999999999998764
Q ss_pred cccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 389 ADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 389 ~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
......+ +..+.|..++. -+.+.+.++|.++++|++
T Consensus 317 ---~~~~e~v-~~~~~g~~~~~--~d~~~la~~i~~l~~~~~ 352 (394)
T 2jjm_A 317 ---GGIPEVI-QHGDTGYLCEV--GDTTGVADQAIQLLKDEE 352 (394)
T ss_dssp ---TTSTTTC-CBTTTEEEECT--TCHHHHHHHHHHHHHCHH
T ss_pred ---CChHHHh-hcCCceEEeCC--CCHHHHHHHHHHHHcCHH
Confidence 3344456 46678887764 367889999999998764
No 40
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.35 E-value=9.7e-05 Score=73.44 Aligned_cols=84 Identities=13% Similarity=0.050 Sum_probs=59.1
Q ss_pred CCeEEeCcccHh---hhhcCCCceeee---cccchhhHHHHHHcCCcEEecccccccchh-HHHhhhhccceEEeeeecc
Q 013951 341 RGLLIRGWAPQV---LILSHPAVGGFL---THCGWNSSLEGISAGVQMLTWPLFADQFCN-EKLIVNVLRIGVSVGVEVD 413 (433)
Q Consensus 341 ~nv~~~~~~pq~---~lL~~~~~~~~I---tHGG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~~v~e~~G~G~~l~~~~~ 413 (433)
++|.+.+++|+. .++..+++ || ..|+..++.||+++|+|+|++|...=.-+. +..+ +..|+.-.+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhcC---
Confidence 789999999854 46778888 66 236667899999999999997743111111 3445 35566654433
Q ss_pred CCcccccchhhcccccc
Q 013951 414 LPITTSNYLCKISCNSQ 430 (433)
Q Consensus 414 ~~~~l~~ai~~il~~~~ 430 (433)
+.+.+.++|.++++|++
T Consensus 508 ~~~~la~~i~~l~~~~~ 524 (568)
T 2vsy_A 508 DDAAFVAKAVALASDPA 524 (568)
T ss_dssp SHHHHHHHHHHHHHCHH
T ss_pred CHHHHHHHHHHHhcCHH
Confidence 77889999999988764
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.34 E-value=2.6e-05 Score=75.96 Aligned_cols=132 Identities=6% Similarity=-0.050 Sum_probs=78.3
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHh---CCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeE-EeCcccHh--hhh
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEA---SNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLL-IRGWAPQV--LIL 355 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~-~~~~~pq~--~lL 355 (433)
.+++..|.+.. .+.+..++++++. .+.++++ +|.+... .... +- ....+. .+|+. +.++.... .++
T Consensus 292 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~i-vG~g~~~-~~~~--l~-~~~~~~-~~~v~~~~g~~~~~~~~~~ 363 (485)
T 1rzu_A 292 PLFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVV-LGAGDVA-LEGA--LL-AAASRH-HGRVGVAIGYNEPLSHLMQ 363 (485)
T ss_dssp CEEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEE-EECBCHH-HHHH--HH-HHHHHT-TTTEEEEESCCHHHHHHHH
T ss_pred eEEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEE-EeCCchH-HHHH--HH-HHHHhC-CCcEEEecCCCHHHHHHHH
Confidence 36677788753 3334455555443 3555444 4443210 0000 11 111122 46886 67883332 578
Q ss_pred cCCCceeeec----ccchhhHHHHHHcCCcEEecccccccchhHHHhhhhc---------cceEEeeeeccCCcccccch
Q 013951 356 SHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVL---------RIGVSVGVEVDLPITTSNYL 422 (433)
Q Consensus 356 ~~~~~~~~It----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~---------G~G~~l~~~~~~~~~l~~ai 422 (433)
..+++ +|. -|.-.++.||+++|+|+|+... ......+ +.. +.|..++. -+.+.+.++|
T Consensus 364 ~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~--~d~~~la~~i 434 (485)
T 1rzu_A 364 AGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFSP--VTLDGLKQAI 434 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEESS--CSHHHHHHHH
T ss_pred hcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeCC--CCHHHHHHHH
Confidence 88888 663 2334589999999999999754 3455556 454 68887764 3668899999
Q ss_pred hhcc---cccc
Q 013951 423 CKIS---CNSQ 430 (433)
Q Consensus 423 ~~il---~~~~ 430 (433)
.+++ +|++
T Consensus 435 ~~ll~~~~~~~ 445 (485)
T 1rzu_A 435 RRTVRYYHDPK 445 (485)
T ss_dssp HHHHHHHTCHH
T ss_pred HHHHHHhCCHH
Confidence 9998 5653
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.31 E-value=3e-05 Score=75.50 Aligned_cols=132 Identities=9% Similarity=-0.018 Sum_probs=77.6
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHh---CCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeE-EeCcccH--hhhh
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEA---SNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLL-IRGWAPQ--VLIL 355 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~-~~~~~pq--~~lL 355 (433)
.+++..|.+.. .+.+..++++++. .+.++++. |.+... .... +- ....+ ..+++. +.++... ..++
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~iv-G~g~~~-~~~~--l~-~~~~~-~~~~v~~~~g~~~~~~~~~~ 364 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALL-GAGDPV-LQEG--FL-AAAAE-YPGQVGVQIGYHEAFSHRIM 364 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEE-EEECHH-HHHH--HH-HHHHH-STTTEEEEESCCHHHHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEE-eCCchH-HHHH--HH-HHHHh-CCCcEEEeCCCCHHHHHHHH
Confidence 45566676542 3445555565554 35555444 433210 0000 11 11112 236885 7788433 2578
Q ss_pred cCCCceeeec----ccchhhHHHHHHcCCcEEecccccccchhHHHhhhhc---------cceEEeeeeccCCcccccch
Q 013951 356 SHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVL---------RIGVSVGVEVDLPITTSNYL 422 (433)
Q Consensus 356 ~~~~~~~~It----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~---------G~G~~l~~~~~~~~~l~~ai 422 (433)
+.+++ +|. -|.-.++.||+++|+|+|+... ......+ +.. +.|..++. -+.+.+.++|
T Consensus 365 ~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~~--~d~~~la~~i 435 (485)
T 2qzs_A 365 GGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFED--SNAWSLLRAI 435 (485)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEECS--SSHHHHHHHH
T ss_pred HhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEECC--CCHHHHHHHH
Confidence 88888 663 2334578899999999999754 3455556 454 67887764 3678899999
Q ss_pred hhcc---cccc
Q 013951 423 CKIS---CNSQ 430 (433)
Q Consensus 423 ~~il---~~~~ 430 (433)
.+++ +|++
T Consensus 436 ~~ll~~~~~~~ 446 (485)
T 2qzs_A 436 RRAFVLWSRPS 446 (485)
T ss_dssp HHHHHHHTSHH
T ss_pred HHHHHHcCCHH
Confidence 9998 5653
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.30 E-value=2.6e-05 Score=79.95 Aligned_cols=135 Identities=10% Similarity=0.038 Sum_probs=80.9
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCC-----CCEEEEEeCCcc-----hh---hhhhhhchhhHHHHhCCCCeEEeC-
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASN-----KPFVWVIRGVSK-----LE---ALEKWLVQENFEERIKGRGLLIRG- 347 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~-----~~~i~~~~~~~~-----~~---~~~~~~~p~~~~~~~~~~nv~~~~- 347 (433)
.+++..|.+.. .+.+..+++|++... .++ +.+|++.. .+ .... +-.-..+....++|.+.+
T Consensus 573 ~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~L-vIvG~g~~~~~~~~e~~~~~~~--L~~li~~lgL~~~V~flG~ 647 (816)
T 3s28_A 573 PILFTMARLDR--VKNLSGLVEWYGKNTRLRELANL-VVVGGDRRKESKDNEEKAEMKK--MYDLIEEYKLNGQFRWISS 647 (816)
T ss_dssp CEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEE-EEECCCTTSCCCCHHHHHHHHH--HHHHHHHTTCBBBEEEECC
T ss_pred eEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEE-EEEeCCCcccccchhhHHHHHH--HHHHHHHcCCCCcEEEccC
Confidence 45667787643 455677777777653 333 44444431 00 0000 111111112357888887
Q ss_pred ---cccHhhhhc----CCCceeeecc----cchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccCCc
Q 013951 348 ---WAPQVLILS----HPAVGGFLTH----CGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPI 416 (433)
Q Consensus 348 ---~~pq~~lL~----~~~~~~~ItH----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~ 416 (433)
++|+.++.. .+++ +|.- |--.++.||+++|+|+|+. |-......+ +.-+.|+.++. -+.+
T Consensus 648 ~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv~p--~D~e 718 (816)
T 3s28_A 648 QMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHIDP--YHGD 718 (816)
T ss_dssp CCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEECT--TSHH
T ss_pred ccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEeCC--CCHH
Confidence 455555554 4566 6632 3345899999999999995 555666777 57778888875 3667
Q ss_pred ccccchhhcc----cccc
Q 013951 417 TTSNYLCKIS----CNSQ 430 (433)
Q Consensus 417 ~l~~ai~~il----~~~~ 430 (433)
.+.++|.+++ +|++
T Consensus 719 ~LA~aI~~lL~~Ll~d~~ 736 (816)
T 3s28_A 719 QAADTLADFFTKCKEDPS 736 (816)
T ss_dssp HHHHHHHHHHHHHHHCTH
T ss_pred HHHHHHHHHHHHhccCHH
Confidence 8888887666 6653
No 44
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.26 E-value=8.8e-05 Score=70.44 Aligned_cols=76 Identities=5% Similarity=-0.111 Sum_probs=58.1
Q ss_pred CCCeEEeCcccHhh---hhcCCCceeeec---ccc-hhhHHHHH-------HcCCcEEecccccccchhHHHhhhhccce
Q 013951 340 GRGLLIRGWAPQVL---ILSHPAVGGFLT---HCG-WNSSLEGI-------SAGVQMLTWPLFADQFCNEKLIVNVLRIG 405 (433)
Q Consensus 340 ~~nv~~~~~~pq~~---lL~~~~~~~~It---HGG-~gs~~eal-------~~GvP~v~~P~~~DQ~~na~~v~e~~G~G 405 (433)
.+||.+.+++|+.+ ++..+++ +|. +.| -+++.||+ ++|+|+|+... + +....|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 47899999998754 6778888 653 334 45688999 99999999754 6 466668
Q ss_pred EE-eeeeccCCcccccchhhcccccc
Q 013951 406 VS-VGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 406 ~~-l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
.. ++. -+.+.+.++|.++++|+.
T Consensus 331 ~l~v~~--~d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 331 RFGYTP--GNADSVIAAITQALEAPR 354 (406)
T ss_dssp EEEECT--TCHHHHHHHHHHHHHCCC
T ss_pred EEEeCC--CCHHHHHHHHHHHHhCcc
Confidence 76 654 367889999999998864
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.25 E-value=3.2e-06 Score=70.38 Aligned_cols=130 Identities=12% Similarity=0.083 Sum_probs=88.5
Q ss_pred EEEeeCCCcCCChhhHHHHHHHHHhC-CCCEEEEEeCCcchhhhhhhhchhhHH--HHhCCCCeEEeCcccH---hhhhc
Q 013951 283 VYVCLGSICNLPSSQLIELGLGLEAS-NKPFVWVIRGVSKLEALEKWLVQENFE--ERIKGRGLLIRGWAPQ---VLILS 356 (433)
Q Consensus 283 v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~p~~~~--~~~~~~nv~~~~~~pq---~~lL~ 356 (433)
+++..|+.. ..+.+..++++++.. +.++++ +|.......+. +... .....+|+.+.+|+|+ ..++.
T Consensus 25 ~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i-~G~~~~~~~l~-----~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIY--PEKRIELQLEVFKKLQDEKLYI-VGWFSKGDHAE-----RYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSS--GGGTHHHHHHHHHHCTTSCEEE-EBCCCTTSTHH-----HHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhCCCcEEEE-EecCccHHHHH-----HHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 445667764 345677788888887 445544 44433211111 1111 1224579999999998 56888
Q ss_pred CCCceeeec---ccch-hhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhcccccc
Q 013951 357 HPAVGGFLT---HCGW-NSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNSQ 430 (433)
Q Consensus 357 ~~~~~~~It---HGG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~~ 430 (433)
.+++ +|. +.|+ .++.||+++|+|+|+.. ...+...+ +..+.|..+ .-+.+.+.++|.++++|++
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i-~~~~~g~~~---~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETV-INEKTGYLV---NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHC-CBTTTEEEE---CSCHHHHHHHHHHHHHCTT
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHh-cCCCccEEe---CCCHHHHHHHHHHHHhCHH
Confidence 8888 665 3344 48999999999999875 45666677 577788877 3478899999999998875
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.13 E-value=7e-05 Score=71.15 Aligned_cols=138 Identities=9% Similarity=0.011 Sum_probs=77.7
Q ss_pred eEEEEeeCCCcCCChhhHHHHHHHHHh-----CCCCEEEEEeCCcchh-hhhhhhchhhHHHHhCCCC-------eEEeC
Q 013951 281 SVVYVCLGSICNLPSSQLIELGLGLEA-----SNKPFVWVIRGVSKLE-ALEKWLVQENFEERIKGRG-------LLIRG 347 (433)
Q Consensus 281 ~~v~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~-~~~~~~~p~~~~~~~~~~n-------v~~~~ 347 (433)
..+++..|.... .+.+..++++++. .+.++++.-.+..... .+... +-+-.+.....++ +.+.+
T Consensus 184 ~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~-~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 184 DVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSI-ALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp SEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHH-HHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred ceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHH-HHHHHHHcCcccccccccceeeccC
Confidence 366777888533 3445555666554 2556655544432100 00000 1111111112333 77889
Q ss_pred cccHhh---hhcCCCceeeec----ccchhhHHHHHHcCCcEEecccccccchhHHHhhhhccc---------------e
Q 013951 348 WAPQVL---ILSHPAVGGFLT----HCGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRI---------------G 405 (433)
Q Consensus 348 ~~pq~~---lL~~~~~~~~It----HGG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~---------------G 405 (433)
|+|+.+ ++..+++ +|. -|.-.++.||+++|+|+|+... ......+ +.... |
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYF-SGDCVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHS-CTTTSEEECCCEEEECTTTCS
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHH-ccCcccccccccccccccccC
Confidence 998544 6778888 663 2334589999999999999653 3333344 22211 4
Q ss_pred E--EeeeeccCCcccccchhhccccccc
Q 013951 406 V--SVGVEVDLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 406 ~--~l~~~~~~~~~l~~ai~~il~~~~~ 431 (433)
+ .++. -+.+.+.++| ++++|++.
T Consensus 334 ~~gl~~~--~d~~~la~~i-~l~~~~~~ 358 (413)
T 3oy2_A 334 IGGIEGI--IDVDDLVEAF-TFFKDEKN 358 (413)
T ss_dssp SCCEEEE--CCHHHHHHHH-HHTTSHHH
T ss_pred cceeeCC--CCHHHHHHHH-HHhcCHHH
Confidence 4 5544 2788999999 99988643
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.04 E-value=0.00023 Score=66.73 Aligned_cols=81 Identities=10% Similarity=0.027 Sum_probs=58.9
Q ss_pred CCeEEeCcccH-hhhhcCCCceeeecc-----cchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeeccC
Q 013951 341 RGLLIRGWAPQ-VLILSHPAVGGFLTH-----CGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDL 414 (433)
Q Consensus 341 ~nv~~~~~~pq-~~lL~~~~~~~~ItH-----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~ 414 (433)
.++++.++..+ ..+++.+++ ++.- +|..++.||+++|+|+|.-|..++.......+ ...|.++..+ +
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~~----d 332 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEVK----N 332 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEECC----S
T ss_pred CcEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEeC----C
Confidence 35666665433 457777777 6541 23478999999999999877777777776666 3678776653 6
Q ss_pred Ccccccchhhcccc
Q 013951 415 PITTSNYLCKISCN 428 (433)
Q Consensus 415 ~~~l~~ai~~il~~ 428 (433)
.+.+.++|.++++|
T Consensus 333 ~~~La~ai~~ll~d 346 (374)
T 2xci_A 333 ETELVTKLTELLSV 346 (374)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhH
Confidence 67899999999987
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.24 E-value=0.00099 Score=54.17 Aligned_cols=130 Identities=13% Similarity=0.057 Sum_probs=78.0
Q ss_pred eEEEEeeCCCcCCChhhHHHHHHHHHhCCC--CEE-EEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhh---h
Q 013951 281 SVVYVCLGSICNLPSSQLIELGLGLEASNK--PFV-WVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVL---I 354 (433)
Q Consensus 281 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~i-~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~---l 354 (433)
+++++..|++.. .+.+..+++++..... .+- +.+|.+........ ...+ ...++.+ +++|+.+ +
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~------~~~~-~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKL------LAQK-LGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHH------HHHH-HTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHH------HHHH-cCCeEEE-eecCHHHHHHH
Confidence 367778888743 4557778888877632 333 33444332211111 1111 1238888 9998754 6
Q ss_pred hcCCCceeeec----ccchhhHHHHHHcCC-cEEecccccccchhHHHhhhhccceEEeeeeccCCcccccchhhccccc
Q 013951 355 LSHPAVGGFLT----HCGWNSSLEGISAGV-QMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISCNS 429 (433)
Q Consensus 355 L~~~~~~~~It----HGG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~~~ 429 (433)
+..+++ +|. -|.-.++.||+++|+ |+|+.. +.......+ +..|. .++ .-+.+.+.++|.++++|+
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~---~~~~~~~~~-~~~~~--~~~--~~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANS---PLSATRQFA-LDERS--LFE--PNNAKDLSAKIDWWLENK 141 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECC---TTCGGGGGC-SSGGG--EEC--TTCHHHHHHHHHHHHHCH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeC---CCCchhhhc-cCCce--EEc--CCCHHHHHHHHHHHHhCH
Confidence 778888 664 233458999999996 999943 222233344 34333 222 237789999999999886
Q ss_pred c
Q 013951 430 Q 430 (433)
Q Consensus 430 ~ 430 (433)
+
T Consensus 142 ~ 142 (166)
T 3qhp_A 142 L 142 (166)
T ss_dssp H
T ss_pred H
Confidence 4
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.96 E-value=0.0031 Score=64.21 Aligned_cols=102 Identities=19% Similarity=0.276 Sum_probs=76.4
Q ss_pred CeEEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHH-hCCCCeEEeCcccHhhhh---
Q 013951 280 SSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEER-IKGRGLLIRGWAPQVLIL--- 355 (433)
Q Consensus 280 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~-~~~~nv~~~~~~pq~~lL--- 355 (433)
+.+||.||.+....+++.+..-.+.|++.+.-++|.......... + +-..++.. ...+.+++.+..|..+-|
T Consensus 522 ~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~--~--l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 522 DAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEP--N--IQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp TSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHH--H--HHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHH--H--HHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 459999999999999999999999999999999999876543211 1 21112111 235678888888876644
Q ss_pred cCCCceeeec---ccchhhHHHHHHcCCcEEeccc
Q 013951 356 SHPAVGGFLT---HCGWNSSLEGISAGVQMLTWPL 387 (433)
Q Consensus 356 ~~~~~~~~It---HGG~gs~~eal~~GvP~v~~P~ 387 (433)
..+++ ++. .+|.+|++|||..|||+|.++-
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g 630 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPG 630 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCC
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccC
Confidence 44555 765 8889999999999999999993
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.89 E-value=0.005 Score=60.44 Aligned_cols=101 Identities=11% Similarity=0.031 Sum_probs=70.7
Q ss_pred eEEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEE--EeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhh---
Q 013951 281 SVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWV--IRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLIL--- 355 (433)
Q Consensus 281 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL--- 355 (433)
.++|.+|++.....++.+....+.+++.+..++|. .+...... .. +-..+...-..+.+.+.+.+|+.+.+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~--~~--~~~~~~~~GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGIT--HP--YVERFIKSYLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGG--HH--HHHHHHHHHHGGGEEEECCCCHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhh--HH--HHHHHHHcCCCccEEEcCCCCHHHHHHHH
Confidence 58999999988889999999899999988877774 34221110 00 11112121123678888999876644
Q ss_pred cCCCceeeec---ccchhhHHHHHHcCCcEEeccc
Q 013951 356 SHPAVGGFLT---HCGWNSSLEGISAGVQMLTWPL 387 (433)
Q Consensus 356 ~~~~~~~~It---HGG~gs~~eal~~GvP~v~~P~ 387 (433)
..+++ ++. .+|..|++||+..|||+|.++-
T Consensus 517 ~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G 549 (631)
T 3q3e_A 517 HNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTG 549 (631)
T ss_dssp HTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECC
T ss_pred hcCcE--EEeCCcccCChHHHHHHHcCCCEEeccC
Confidence 67777 543 3778899999999999999874
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.89 E-value=0.053 Score=49.94 Aligned_cols=106 Identities=13% Similarity=0.026 Sum_probs=69.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeE-EEEecCCCccCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIR-LIEIQFPWQEAGIPEG 81 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~ 81 (433)
...+||+++-..+.|++.-+..+.+.|+++ +.+|++++.+...+.++. .+.++ ++.++. .
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~--------~p~vd~vi~~~~--------~- 68 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY--------NPNIDELIVVDK--------K- 68 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS--------CTTCSEEEEECC--------S-
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCCccEEEEeCc--------c-
Confidence 456899999999999999999999999987 999999999865554332 12343 333321 0
Q ss_pred CCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCC-cEEEECCCCcchHHHHHHcCCCcEE
Q 013951 82 CENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKP-CCIISDMCFPWTVDTAAKFNVPRII 143 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~p-D~vI~D~~~~~~~~~A~~~giP~v~ 143 (433)
.. ...+. .+ ..+.+.+++ .++ |++|.=.-..-...++...|+|...
T Consensus 69 --------~~-~~~~~----~~-~~l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 --------GR-HNSIS----GL-NEVAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp --------SH-HHHHH----HH-HHHHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred --------cc-cccHH----HH-HHHHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 00 00111 11 123444555 689 9999644444566788888999654
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.87 E-value=0.046 Score=50.21 Aligned_cols=102 Identities=11% Similarity=0.114 Sum_probs=63.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCe-EEEEecCCCccCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQI-RLIEIQFPWQEAGIPEGCEN 84 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 84 (433)
+||+++.....|++.-...+.++|+++ +.+|++++.+...+ ..+. .+.+ +++.++. ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~----l~~~----~p~i~~v~~~~~-------~~~--- 62 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRP----LLSR----MPEVNEAIPMPL-------GHG--- 62 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHH----HHTT----CTTEEEEEEC---------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhH----HHhc----CCccCEEEEecC-------Ccc---
Confidence 489999988889999999999999987 99999999984433 3221 1224 3333211 000
Q ss_pred CCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCC-CcchHHHHHHcCCCcEE
Q 013951 85 CDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMC-FPWTVDTAAKFNVPRII 143 (433)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~-~~~~~~~A~~~giP~v~ 143 (433)
...+. ....+.+.+++ .++|++| |.. ......++...|+|...
T Consensus 63 -----~~~~~--------~~~~l~~~l~~--~~~D~vi-d~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 63 -----ALEIG--------ERRKLGHSLRE--KRYDRAY-VLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------CHH--------HHHHHHHHTTT--TTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred -----ccchH--------HHHHHHHHHHh--cCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence 00010 11234455666 7999999 332 23556778888999743
No 53
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.18 E-value=0.022 Score=47.54 Aligned_cols=79 Identities=11% Similarity=0.013 Sum_probs=56.6
Q ss_pred CeEE-eCcccHh---hhhcCCCceeeecc----cchhhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeecc
Q 013951 342 GLLI-RGWAPQV---LILSHPAVGGFLTH----CGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEVD 413 (433)
Q Consensus 342 nv~~-~~~~pq~---~lL~~~~~~~~ItH----GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~~ 413 (433)
||.+ .+++++. .++..+++ +|.- |.-.++.||+++|+|+|+.... .+...+ ..+.|..++. -
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~~--~ 165 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVKA--G 165 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEECT--T
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEecC--C
Confidence 8999 9999854 57888888 6642 2245789999999999987532 233233 3456777654 3
Q ss_pred CCcccccchhhccc-ccc
Q 013951 414 LPITTSNYLCKISC-NSQ 430 (433)
Q Consensus 414 ~~~~l~~ai~~il~-~~~ 430 (433)
+.+.+.++|.++++ |++
T Consensus 166 ~~~~l~~~i~~l~~~~~~ 183 (200)
T 2bfw_A 166 DPGELANAILKALELSRS 183 (200)
T ss_dssp CHHHHHHHHHHHHHCCHH
T ss_pred CHHHHHHHHHHHHhcCHH
Confidence 67889999999998 764
No 54
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=94.68 E-value=0.048 Score=51.54 Aligned_cols=82 Identities=18% Similarity=0.089 Sum_probs=58.1
Q ss_pred CCCeEEeCcccHhh---hhcCCCceeeecc---cch-hhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeeec
Q 013951 340 GRGLLIRGWAPQVL---ILSHPAVGGFLTH---CGW-NSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVEV 412 (433)
Q Consensus 340 ~~nv~~~~~~pq~~---lL~~~~~~~~ItH---GG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~~ 412 (433)
.+||.+.+++|+.+ +++.+++ ||.- =|. .++.||+++|+|+|+ -..+ ....+ +.-..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeCC--
Confidence 35888999998764 6777888 6642 133 467999999999998 3222 22345 46557877765
Q ss_pred cCCcccccchhhccccccc
Q 013951 413 DLPITTSNYLCKISCNSQA 431 (433)
Q Consensus 413 ~~~~~l~~ai~~il~~~~~ 431 (433)
-+.+.+.++|.++++|++.
T Consensus 364 ~d~~~la~ai~~ll~~~~~ 382 (413)
T 2x0d_A 364 LNPENIAETLVELCMSFNN 382 (413)
T ss_dssp CSHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHcCHHH
Confidence 3678899999999988754
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=93.74 E-value=0.028 Score=51.51 Aligned_cols=78 Identities=14% Similarity=0.071 Sum_probs=56.9
Q ss_pred CeEEeCcccHhhhh---cCCCceeeecccch---------hhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEee
Q 013951 342 GLLIRGWAPQVLIL---SHPAVGGFLTHCGW---------NSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVG 409 (433)
Q Consensus 342 nv~~~~~~pq~~lL---~~~~~~~~ItHGG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~ 409 (433)
||.+.+|+|+.++. +.++..++.+-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 99999999997754 45556555433333 34789999999999754 56788889 6999999886
Q ss_pred eeccCCcccccchhhcccc
Q 013951 410 VEVDLPITTSNYLCKISCN 428 (433)
Q Consensus 410 ~~~~~~~~l~~ai~~il~~ 428 (433)
+.+.+.++|.++..+
T Consensus 290 ----~~~e~~~~i~~l~~~ 304 (339)
T 3rhz_A 290 ----DVEEAIMKVKNVNED 304 (339)
T ss_dssp ----SHHHHHHHHHHCCHH
T ss_pred ----CHHHHHHHHHHhCHH
Confidence 345677777776543
No 56
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=90.21 E-value=5.3 Score=33.56 Aligned_cols=107 Identities=9% Similarity=-0.021 Sum_probs=63.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCC--EEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGA--IVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH--~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
+||+|+.+++.+ -+.++.++|.+.+| +|..+.+........+..... ++.+..++ +....
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~-----gIp~~~~~--------~~~~~-- 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH-----NVECKVIQ--------RKEFP-- 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH-----TCCEEECC--------GGGSS--
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc-----CCCEEEeC--------ccccc--
Confidence 588888766653 36777788888888 776665543322333333333 56665432 11110
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
. .....+.+.+.+++ .+||++|+=.+. .-...+-+.+...++-++++
T Consensus 64 ----~---------r~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 64 ----S---------KKEFEERMALELKK--KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp ----S---------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred ----c---------hhhhhHHHHHHHHh--cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 0 01223456778888 899999986653 35556666666677776544
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=89.48 E-value=0.36 Score=47.22 Aligned_cols=131 Identities=12% Similarity=0.009 Sum_probs=72.4
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHh---CCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHh---hhh
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEA---SNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQV---LIL 355 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~---~lL 355 (433)
.+++..|.+.. .+.+..+++++.. .+.++++...+....... + .. .......++.+....+.. .++
T Consensus 328 p~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~----~-~~-~~~~~~~~v~~~~~~~~~~~~~~~ 399 (536)
T 3vue_A 328 PLIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKL----L-KS-MEEKYPGKVRAVVKFNAPLAHLIM 399 (536)
T ss_dssp CEEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHH----H-HH-HHHHSTTTEEEECSCCHHHHHHHH
T ss_pred cEEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCchHHHH----H-HH-HHhhcCCceEEEEeccHHHHHHHH
Confidence 34456676643 3445566666654 455555544333211100 0 00 112245788877777664 367
Q ss_pred cCCCceeeecc---cch-hhHHHHHHcCCcEEecccccccchhHHHhhhhccceEEeeee--------ccCCcccccchh
Q 013951 356 SHPAVGGFLTH---CGW-NSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIGVSVGVE--------VDLPITTSNYLC 423 (433)
Q Consensus 356 ~~~~~~~~ItH---GG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G~~l~~~--------~~~~~~l~~ai~ 423 (433)
+.+++ ||.= =|. .+++||+++|+|+|+... ......| +.-.-|...... ..+.+.+.++|+
T Consensus 400 ~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ 472 (536)
T 3vue_A 400 AGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLK 472 (536)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHH
T ss_pred Hhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchhee-eCCCCccccccCCCceeEECCCCHHHHHHHHH
Confidence 77887 6642 233 388999999999998653 3344445 354445433221 134567777887
Q ss_pred hccc
Q 013951 424 KISC 427 (433)
Q Consensus 424 ~il~ 427 (433)
++|+
T Consensus 473 ral~ 476 (536)
T 3vue_A 473 RAIK 476 (536)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7664
No 58
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=89.33 E-value=5 Score=34.04 Aligned_cols=109 Identities=9% Similarity=-0.012 Sum_probs=65.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCE 83 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (433)
.++||+|+.+++.. -+.++.+.|.+. +++|..+.+........+..... ++.+..++ +....
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~-----gIp~~~~~--------~~~~~ 84 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA-----GVDALHMD--------PAAYP 84 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT-----TCEEEECC--------GGGSS
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc-----CCCEEEEC--------ccccc
Confidence 45799999877643 367777888876 68987776553222233333322 67766542 11110
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
.. ....+.+.+.+++ .+||++|+=.+. .-...+-+.+...++-+.++
T Consensus 85 ------~r---------~~~~~~~~~~l~~--~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 85 ------SR---------TAFDAALAERLQA--YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ------SH---------HHHHHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ------ch---------hhccHHHHHHHHh--cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 00 1223466778888 899999987653 35566667777777776544
No 59
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=88.30 E-value=1.3 Score=34.20 Aligned_cols=50 Identities=10% Similarity=-0.024 Sum_probs=40.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHH
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIA 55 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~ 55 (433)
++.||++.+.+.-+|-....-++..|..+|++|..+......+.+.+...
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~ 51 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAI 51 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHH
Confidence 35689999999999999999999999999999998876544444444433
No 60
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=86.12 E-value=8.2 Score=28.57 Aligned_cols=38 Identities=11% Similarity=0.130 Sum_probs=25.9
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
|++.++++||+++- .|-.-...+.+.|.+.|++|..+.
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~ 38 (130)
T 3eod_A 1 MTQPLVGKQILIVE----DEQVFRSLLDSWFSSLGATTVLAA 38 (130)
T ss_dssp --CTTTTCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCceEEEeC
Confidence 66777778888885 455556677777888888876543
No 61
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=86.10 E-value=8 Score=32.33 Aligned_cols=107 Identities=9% Similarity=0.014 Sum_probs=63.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
+||+++.+++.+ -+.++.++|.+. +|+|..+.+......+.+..... ++.+..++ +..+.
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~-----gIp~~~~~--------~~~~~-- 65 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE-----NVPAFVFS--------PKDYP-- 65 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT-----TCCEEECC--------GGGSS--
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc-----CCCEEEeC--------ccccc--
Confidence 588888766644 366777888877 79998776553222233333322 56665432 11110
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
.. ....+.+.+.+++ .+||++|+=.+. .-...+-+.+...++-++++
T Consensus 66 ----~~---------~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 66 ----SK---------AAFESEILRELKG--RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp ----SH---------HHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred ----ch---------hhhHHHHHHHHHh--cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 00 1223456778888 899999977654 35566667777777776544
No 62
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=86.06 E-value=0.71 Score=41.69 Aligned_cols=134 Identities=9% Similarity=-0.101 Sum_probs=76.5
Q ss_pred CeEEEEeeCCCcC---CChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCc--cc-Hhh
Q 013951 280 SSVVYVCLGSICN---LPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGW--AP-QVL 353 (433)
Q Consensus 280 ~~~v~vs~Gs~~~---~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~--~p-q~~ 353 (433)
++.|.+..|+... .+.+.+.++++.+.+.+.++++..++..+.+ .-+.+.. ..+++.+.+- +. -.+
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~------~~~~i~~--~~~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEE------RAKRLAE--GFAYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHH------HHHHHHT--TCTTEEECCCCCHHHHHH
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHH------HHHHHHh--hCCcccccCCCCHHHHHH
Confidence 4578888887543 6677888888888776777665544322111 1111111 1234444332 23 356
Q ss_pred hhcCCCceeeecc-cchhhHHHHHHcCCcEEecccccccchhHHHhhhhccce-EEe-----eeeccCCcccccchhhcc
Q 013951 354 ILSHPAVGGFLTH-CGWNSSLEGISAGVQMLTWPLFADQFCNEKLIVNVLRIG-VSV-----GVEVDLPITTSNYLCKIS 426 (433)
Q Consensus 354 lL~~~~~~~~ItH-GG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~e~~G~G-~~l-----~~~~~~~~~l~~ai~~il 426 (433)
+++++++ +|+. .| .++=|.+.|+|+|++=-..|-..++ =.|-. ..+ ..+.++.+++.+++.++|
T Consensus 250 li~~a~l--~I~~DSG--~~HlAaa~g~P~v~lfg~t~p~~~~-----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l 320 (326)
T 2gt1_A 250 VLAGAKF--VVSVDTG--LSHLTAALDRPNITVYGPTDPGLIG-----GYGKNQMVCRAPGNELSQLTANAVKQFIEENA 320 (326)
T ss_dssp HHHTCSE--EEEESSH--HHHHHHHTTCCEEEEESSSCHHHHC-----CCSSSEEEEECGGGCGGGCCHHHHHHHHHHTT
T ss_pred HHHhCCE--EEecCCc--HHHHHHHcCCCEEEEECCCChhhcC-----CCCCCceEecCCcccccCCCHHHHHHHHHHHH
Confidence 8989999 9998 54 4454777999999981111211111 11111 111 234678899999999999
Q ss_pred cccc
Q 013951 427 CNSQ 430 (433)
Q Consensus 427 ~~~~ 430 (433)
++..
T Consensus 321 ~~~~ 324 (326)
T 2gt1_A 321 EKAA 324 (326)
T ss_dssp TTC-
T ss_pred HHhc
Confidence 8754
No 63
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=85.17 E-value=0.42 Score=44.96 Aligned_cols=41 Identities=12% Similarity=0.053 Sum_probs=31.7
Q ss_pred CCCcEEEEEcCCCC-----CChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 5 ASQVHFLLLPYLAP-----GHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 5 ~~~~~il~~~~~~~-----GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
..++||++++.... |=......+|++|+++||+|++++...
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 35689988875422 333568999999999999999999864
No 64
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=85.04 E-value=1.8 Score=34.47 Aligned_cols=49 Identities=16% Similarity=0.062 Sum_probs=40.2
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHH
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVI 54 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~ 54 (433)
++.||++.+.+.-.|-....-++..|..+|++|..+......+.+.+..
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa 65 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAA 65 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 5679999999999999999999999999999999987654444444433
No 65
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=84.40 E-value=1.2 Score=38.49 Aligned_cols=112 Identities=17% Similarity=0.190 Sum_probs=59.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCCCCC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENCDLL 88 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 88 (433)
|||+.-=-+. +.--+.+|+++|.+.| +|+++.+..++...-..+ .....+++...... .....+.
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si----T~~~pl~~~~~~~~--------~~~~v~G- 67 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL----TFTEPLKMRKIDTD--------FYTVIDG- 67 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC----CCSSCEEEEEEETT--------EEEETTC-
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc----CCCCCceeEEeecc--------ceeecCC-
Confidence 6666542222 3344889999999998 599998886654321110 01123455443211 0000111
Q ss_pred CCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEE----------CCCCc---chHHHHHHcCCCcEEEec
Q 013951 89 PTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIIS----------DMCFP---WTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~----------D~~~~---~~~~~A~~~giP~v~~~~ 146 (433)
.+.+ -. .-.+..++.+ .+||+||+ |.++. +++.-|..+|||.|.+|.
T Consensus 68 TPaD--CV-------~lal~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 68 TPAD--CV-------HLGYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp CHHH--HH-------HHHHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred ChHH--HH-------hhhhhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 1111 00 1123344555 79999998 44433 455666678999999864
No 66
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=84.19 E-value=12 Score=33.60 Aligned_cols=106 Identities=9% Similarity=0.047 Sum_probs=60.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcch----hhhHHHHHHhhhCCCCeEEEEecCCCccCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA----ARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPE 80 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (433)
++++||+|+- --+....+.++|.++||+|..+.+.... ..+++..... ++.+...+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~-----gIpv~~~~---------- 79 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKD-----GVPVFKYS---------- 79 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHH-----TCCEEECS----------
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHc-----CCCEEecC----------
Confidence 3458999992 2233445678999999999877653221 2233333333 56555432
Q ss_pred CCCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc-chHHHHHHcCCCcEEEecc
Q 013951 81 GCENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP-WTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (433)
.... .. ...+++.+.+++ .+||++|+=.+.. -...+-......++-++++
T Consensus 80 ~~~~-~~--------------~~~~~~~~~l~~--~~~Dliv~a~y~~ilp~~il~~~~~g~iNiHpS 130 (329)
T 2bw0_A 80 RWRA-KG--------------QALPDVVAKYQA--LGAELNVLPFCSQFIPMEIISAPRHGSIIYHPS 130 (329)
T ss_dssp CCEE-TT--------------EECHHHHHHHHT--TCCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred cccc-cc--------------cccHHHHHHHHh--cCCCEEEEeehhhhCCHHHHhhCcCCEEEEcCC
Confidence 1100 00 112355667788 8999999776542 4455555566667776554
No 67
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=83.84 E-value=14 Score=30.81 Aligned_cols=107 Identities=8% Similarity=-0.010 Sum_probs=64.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
+||+++.++..+ -+.+|.+.+.+. +|+|..+.+........+..... ++.+..++. ....
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~-----gIp~~~~~~--------~~~~-- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA-----GIATHTLIA--------SAFD-- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT-----TCEEEECCG--------GGCS--
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc-----CCcEEEeCc--------cccc--
Confidence 378888766554 366777777765 68988776654333333333333 676665421 1100
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
.. ....+.+.+.+++ .+||++|+=.+. .-...+-+.+...++-++++
T Consensus 63 ----~r---------~~~~~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 ----SR---------EAYDRELIHEIDM--YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ----SH---------HHHHHHHHHHHGG--GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----ch---------hhccHHHHHHHHh--cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 00 1223466778888 899999987654 35566667777777776544
No 68
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=83.52 E-value=3.1 Score=34.73 Aligned_cols=52 Identities=17% Similarity=0.107 Sum_probs=42.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHh
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARA 57 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~ 57 (433)
++.+|++.+.++-.|-....-++..|..+|++|..+....-.+.+.+.....
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~ 138 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKY 138 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHc
Confidence 4568999999999999999999999999999999998765555555544433
No 69
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=82.65 E-value=19 Score=29.59 Aligned_cols=102 Identities=11% Similarity=0.045 Sum_probs=61.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcc--hhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVN--AARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCE 83 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (433)
.+..|.+++..+.|-..-.+.+|-....+|+.|.|+..-.. ...-.+...+. ++.+.... .++.
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L-----~v~~~~~g---------~gf~ 92 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH-----GVEFQVMA---------TGFT 92 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG-----TCEEEECC---------TTCC
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC-----CcEEEEcc---------cccc
Confidence 35679999999999999999999999999999999964432 11111222222 46666543 1221
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF 127 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~ 127 (433)
. .......-............+.+.+ .++|+||.|-+.
T Consensus 93 ~----~~~~~~~~~~~a~~~l~~a~~~l~~--~~yDlvILDEi~ 130 (196)
T 1g5t_A 93 W----ETQNREADTAACMAVWQHGKRMLAD--PLLDMVVLDELT 130 (196)
T ss_dssp C----CGGGHHHHHHHHHHHHHHHHHHTTC--TTCSEEEEETHH
T ss_pred c----CCCCcHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCCC
Confidence 1 1111112222223334455556666 799999999753
No 70
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=82.47 E-value=4.6 Score=33.68 Aligned_cols=111 Identities=12% Similarity=-0.008 Sum_probs=62.4
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCC
Q 013951 4 EASQVHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEG 81 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (433)
+|+++||+++.++..+. +.+|.+.+.+. .++|..+.+..-.....+..+.. ++.+..++. ..
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~-----gIp~~~~~~--------~~ 67 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA-----GIATQVFKR--------KD 67 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT-----TCCEEECCG--------GG
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc-----CCCEEEeCc--------cc
Confidence 46778999988766544 45566666554 37888777642111111222222 566655421 11
Q ss_pred CCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 82 CENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
+ ... ....+.+.+.+++ .+||++|+=.+. .-...+-+.+.-.++-++++
T Consensus 68 ~------~~r---------~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 68 F------ASK---------EAHEDAILAALDV--LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp S------SSH---------HHHHHHHHHHHHH--HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred c------CCH---------HHHHHHHHHHHHh--cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
Confidence 0 000 1123567788888 899999977654 35566666776677766543
No 71
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=82.31 E-value=11 Score=28.85 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=21.6
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEE
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIV 41 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~ 41 (433)
|+.++++.+|+++- .+-.-...|.+.|.+.|++|..+
T Consensus 1 Ms~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~ 37 (154)
T 2rjn_A 1 MSLNYKNYTVMLVD----DEQPILNSLKRLIKRLGCNIITF 37 (154)
T ss_dssp ---CCSCCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHcCCeEEEe
Confidence 55566667777765 34455566666676677776643
No 72
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=81.91 E-value=22 Score=31.80 Aligned_cols=100 Identities=11% Similarity=0.025 Sum_probs=56.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhh----------hHHHHHHhhhCCCCeEEEEecCCCcc
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAAR----------FKTVIARAIKSGLQIRLIEIQFPWQE 75 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~~ 75 (433)
+++||+|+-.+. ......++|.++||+|..+.+..+... +++..... ++.+..
T Consensus 6 ~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~-----gIpv~~------- 68 (318)
T 3q0i_A 6 QSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEH-----NVPVYQ------- 68 (318)
T ss_dssp -CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHT-----TCCEEC-------
T ss_pred cCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHc-----CCCEEc-------
Confidence 478999987653 345566888889999988877543321 12222211 333321
Q ss_pred CCCCCCCCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 76 AGIPEGCENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
+.. .. .+++.+.+++ .+||++|+=.+. .-...+-+.....++-++++
T Consensus 69 ---~~~------~~--------------~~~~~~~l~~--~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpS 116 (318)
T 3q0i_A 69 ---PEN------FK--------------SDESKQQLAA--LNADLMVVVAYGLLLPKVVLDTPKLGCINVHGS 116 (318)
T ss_dssp ---CSC------SC--------------SHHHHHHHHT--TCCSEEEESSCCSCCCHHHHTSSTTCEEEEESS
T ss_pred ---cCc------CC--------------CHHHHHHHHh--cCCCEEEEeCccccCCHHHHhhCcCCEEEeCCc
Confidence 111 10 1246677888 899999986654 34445555555556776554
No 73
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=81.63 E-value=4.1 Score=35.30 Aligned_cols=61 Identities=13% Similarity=0.018 Sum_probs=45.7
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEec
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQ 70 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 70 (433)
.++.+|++.+.++..|-....-++..|..+|++|..+....-.+.+.+..... ....+.+.
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~-----~~d~V~lS 181 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKE-----KPIMLTGT 181 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHH-----CCSEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHc-----CCCEEEEE
Confidence 34679999999999999999999999999999999987654444444444433 34455543
No 74
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=81.42 E-value=15 Score=30.57 Aligned_cols=107 Identities=13% Similarity=0.015 Sum_probs=61.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
+||+++.++..+.+. +|.+.+.+. +|+|..+.+........+..... ++.+..++ +....
T Consensus 1 ~riaVl~SG~Gs~L~---aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~-----gIp~~~~~--------~~~~~-- 62 (209)
T 1meo_A 1 ARVAVLISGTGSNLQ---ALIDSTREPNSSAQIDIVISNKAAVAGLDKAERA-----GIPTRVIN--------HKLYK-- 62 (209)
T ss_dssp CEEEEEESSSCTTHH---HHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHT-----TCCEEECC--------GGGSS--
T ss_pred CeEEEEEECCchHHH---HHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHc-----CCCEEEEC--------ccccC--
Confidence 378888867665444 455565554 79998887654433333323222 56555432 11110
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
.. ....+.+.+.+++ .+||++|+=.+. .-...+-+.+...++-+.++
T Consensus 63 ----~r---------~~~~~~~~~~l~~--~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 63 ----NR---------VEFDSAIDLVLEE--FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ----SH---------HHHHHHHHHHHHH--TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----ch---------hhhhHHHHHHHHh--cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccC
Confidence 00 1123456778888 899999966553 34555666677777776544
No 75
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=80.63 E-value=2 Score=35.84 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=34.4
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcch
Q 013951 4 EASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
+.+++||++.-.++.+-+. ...|.+.|+++| +|.++.++.-.
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGG
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHH
Confidence 3457899999999988777 899999999999 99999998543
No 76
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=80.58 E-value=2 Score=36.92 Aligned_cols=39 Identities=21% Similarity=0.140 Sum_probs=29.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchh
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAA 48 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~ 48 (433)
+|||+.-=-+. |.--..+|+++|.+.| +|+++.+..++.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~S 40 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLS 40 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCcc
Confidence 46766653333 5556899999999988 999999986654
No 77
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=79.75 E-value=15 Score=28.24 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=18.1
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEE
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIV 41 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~ 41 (433)
|.-..++.||+++- .+-.-...|.+.|.+.|++|..+
T Consensus 1 M~~~~~~~~ILivd----d~~~~~~~l~~~L~~~g~~v~~~ 37 (154)
T 3gt7_A 1 MSLSNRAGEILIVE----DSPTQAEHLKHILEETGYQTEHV 37 (154)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCcccCCCcEEEEe----CCHHHHHHHHHHHHHCCCEEEEe
Confidence 33344456666664 34445555666666666666444
No 78
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=79.63 E-value=31 Score=30.80 Aligned_cols=101 Identities=14% Similarity=0.072 Sum_probs=59.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchh----------hhHHHHHHhhhCCCCeEEEEecCCCc
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAA----------RFKTVIARAIKSGLQIRLIEIQFPWQ 74 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~~~~ 74 (433)
++++||+|+-.|..+ ....++|.++||+|..+.+..... -+++..... ++.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~gRg~~l~~~pv~~~A~~~-----gIpv~~------ 65 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQPDRPVGRKKVLTPTPVKVEAEKH-----GIPVLQ------ 65 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCCCCEETTTTEECCCHHHHHHHHT-----TCCEEC------
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCCCcccCCCcccCCCHHHHHHHHc-----CCCEEc------
Confidence 567899999777553 345677888899999888765431 122222222 343321
Q ss_pred cCCCCCCCCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 75 EAGIPEGCENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
+.. ... ++..+.+++ .+||++|+=.+. .-...+-+.....++-++++
T Consensus 66 ----~~~------~~~--------------~~~~~~l~~--~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHpS 113 (317)
T 3rfo_A 66 ----PLR------IRE--------------KDEYEKVLA--LEPDLIVTAAFGQIVPNEILEAPKYGCINVHAS 113 (317)
T ss_dssp ----CSC------TTS--------------HHHHHHHHH--HCCSEEEESSCCSCCCHHHHHSSTTCEEEEESS
T ss_pred ----ccc------CCC--------------HHHHHHHHh--cCCCEEEEcCchhhCCHHHHhhCcCCEEEECCc
Confidence 111 100 123455677 799999987664 34445555566667777654
No 79
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=79.55 E-value=4.2 Score=33.91 Aligned_cols=39 Identities=15% Similarity=0.051 Sum_probs=34.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
++||++.-.|+-|-+. ...|.+.|+++|++|.++.++.-
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A 42 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAA 42 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccH
Confidence 4689999889988887 99999999999999999999843
No 80
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=78.50 E-value=11 Score=31.62 Aligned_cols=109 Identities=13% Similarity=0.066 Sum_probs=62.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQ-HGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCEN 84 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (433)
+++||+++.++..+.++ +|.+...+ .+++|..+.+........+..+.. ++.+..++. ..+
T Consensus 4 ~~~riavl~SG~Gsnl~---all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~-----gIp~~~~~~--------~~~-- 65 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQ---AIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA-----DIPTHIIPH--------EEF-- 65 (215)
T ss_dssp CCEEEEEEESSCCHHHH---HHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT-----TCCEEECCG--------GGS--
T ss_pred CCcEEEEEEeCCcHHHH---HHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc-----CCCEEEeCc--------ccc--
Confidence 46789988876655444 44555544 368988877642221112222222 566665431 110
Q ss_pred CCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 85 CDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
+.. ....+.+.+.+++ .+||++|+=.+. .-...+-+.+...++-++++
T Consensus 66 ----~~r---------~~~d~~~~~~l~~--~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 66 ----PSR---------TDFESTLQKTIDH--YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp ----SSH---------HHHHHHHHHHHHT--TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ----Cch---------hHhHHHHHHHHHh--cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 000 0123567788888 999999987654 35566667777777776544
No 81
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=77.77 E-value=9.6 Score=37.02 Aligned_cols=44 Identities=14% Similarity=0.159 Sum_probs=29.5
Q ss_pred CCCC--CCCcEEEEEcCC------CCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 1 MASE--ASQVHFLLLPYL------APGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 1 m~~~--~~~~~il~~~~~------~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|++. .+++||+++++- +.|=-.-+-+|+++|+++||+|+++++.
T Consensus 1 ~~~~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp -------CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcccCCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 5554 468999999742 1221233668999999999999999965
No 82
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=77.30 E-value=15 Score=35.13 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 013951 105 QPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIF 144 (433)
Q Consensus 105 ~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~ 144 (433)
.++.+.+++ .+||++|... .+..+|+++|||++.+
T Consensus 391 ~el~~~i~~--~~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 391 RVLLKTVDE--YQADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHH--TTCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHHh--cCCCEEEECC---chhHHHHHcCCCEEEe
Confidence 467788888 8999999874 4678999999999764
No 83
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=77.17 E-value=10 Score=31.66 Aligned_cols=110 Identities=11% Similarity=0.081 Sum_probs=61.2
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCC
Q 013951 4 EASQVHFLLLPYLAPGHLIPMFDIARLLAQ-HGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGC 82 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P~l~La~~L~~-rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (433)
...++||+|+.+++.+.+. +|.+...+ .+++|..+.+..... ..+..+.. ++.+..++. ...
T Consensus 9 ~~~~~ri~vl~SG~gsnl~---all~~~~~~~~~eI~~Vis~~~a~-~~~~A~~~-----gIp~~~~~~--------~~~ 71 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLR---SLLDAAVGDYPARVVAVGVDRECR-AAEIAAEA-----SVPVFTVRL--------ADH 71 (215)
T ss_dssp CCSSEEEEEEESSCCHHHH---HHHHHSSTTCSEEEEEEEESSCCH-HHHHHHHT-----TCCEEECCG--------GGS
T ss_pred CCCCcEEEEEEeCChHHHH---HHHHHHhccCCCeEEEEEeCCchH-HHHHHHHc-----CCCEEEeCc--------ccc
Confidence 3457799999877655444 44444433 356888777654422 22222222 566655321 000
Q ss_pred CCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 83 ENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
... ....+.+.+.+++ .+||++|+=.+. .-...+-+.+...++-++++
T Consensus 72 ------~~r---------~~~d~~~~~~l~~--~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 72 ------PSR---------DAWDVAITAATAA--HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp ------SSH---------HHHHHHHHHHHHT--TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred ------cch---------hhhhHHHHHHHHh--hCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 000 1124567788888 999999975543 34555666666667766443
No 84
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=76.28 E-value=3.2 Score=33.58 Aligned_cols=43 Identities=7% Similarity=-0.052 Sum_probs=35.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhh
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARF 50 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~ 50 (433)
.+||++.-.++.|=+. ...+.+.|+++|++|.++.++.-...+
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 4688888888877665 899999999999999999998655443
No 85
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=76.21 E-value=23 Score=31.58 Aligned_cols=100 Identities=14% Similarity=0.050 Sum_probs=58.5
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchh----------hhHHHHHHhhhCCCCeEEEEecCCCcc
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAA----------RFKTVIARAIKSGLQIRLIEIQFPWQE 75 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~~~~~~ 75 (433)
+++||+|+-.+.. .....++|.++||+|..+.+..... -+++..... ++.+..
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~pd~p~grg~~~~~~~v~~~A~~~-----gIpv~~------- 64 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEK-----GLPVFQ------- 64 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECCCCBC------CBCCHHHHHHHHT-----TCCEEC-------
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeCCCCccccccccCcCHHHHHHHHc-----CCcEEe-------
Confidence 3579999886542 3455577777899998887654321 123322222 344321
Q ss_pred CCCCCCCCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 76 AGIPEGCENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
+... . .+.+.+.+++ .+||++|+=.+. .-...+-......++-++++
T Consensus 65 ---~~~~------~--------------~~~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 112 (314)
T 1fmt_A 65 ---PVSL------R--------------PQENQQLVAE--LQADVMVVVAYGLILPKAVLEMPRLGCINVHGS 112 (314)
T ss_dssp ---CSCS------C--------------SHHHHHHHHH--TTCSEEEEESCCSCCCHHHHHSSTTCEEEEESS
T ss_pred ---cCCC------C--------------CHHHHHHHHh--cCCCEEEEeeccccCCHHHHhhccCCEEEEcCC
Confidence 1110 0 1355677888 899999976553 34455556666677777654
No 86
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=75.75 E-value=18 Score=34.87 Aligned_cols=96 Identities=15% Similarity=0.128 Sum_probs=57.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhC-CC--CeEEEEecCCCccCCCCCCCC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKS-GL--QIRLIEIQFPWQEAGIPEGCE 83 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~i~~~~~~~~~~~~~~ 83 (433)
.+|++++. +-.-.+.|++.|.+-|-+|..+.+.......++........ .. +.....
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~--------------- 423 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCHNGNKRWKKAVDAILAASPYGKNATVYI--------------- 423 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHTSGGGTTCEEEE---------------
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeCCCCHHHHHHHHHHHhhccCCCCcEEEE---------------
Confidence 46788872 34456778888888899988887654333332222111000 00 001000
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHc-------CCCcEEE
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKF-------NVPRIIF 144 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~-------giP~v~~ 144 (433)
. .+ ...+++.+++ .+||++|.... +..+|+++ |||++.+
T Consensus 424 ~------~D-----------~~~l~~~i~~--~~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 424 G------KD-----------LWHLRSLVFT--DKPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp S------CC-----------HHHHHHHHHH--TCCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred C------CC-----------HHHHHHHHHh--cCCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 0 00 2367778888 89999999964 45677777 9999874
No 87
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=75.32 E-value=26 Score=31.16 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=56.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhh----------hHHHHHHhhhCCCCeEEEEecCCCccC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAAR----------FKTVIARAIKSGLQIRLIEIQFPWQEA 76 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~i~~~~~~~ 76 (433)
++||+|+-.|..+ ....++|.++||+|..+.+..++.. +++..... ++.+..
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~-----gIpv~~-------- 63 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQN-----EIPIIQ-------- 63 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHT-----TCCEEC--------
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHc-----CCCEEC--------
Confidence 5799999877554 3456788889999988887544321 11211111 333221
Q ss_pred CCCCCCCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 77 GIPEGCENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
+.. .. .+++.+.+++ .+||++|+=.+. .-...+-+.....++-++++
T Consensus 64 --~~~------~~--------------~~~~~~~l~~--~~~Dliv~~~~~~ilp~~il~~~~~g~iNiHpS 111 (314)
T 3tqq_A 64 --PFS------LR--------------DEVEQEKLIA--MNADVMVVVAYGLILPKKALNAFRLGCVNVHAS 111 (314)
T ss_dssp --CSC------SS--------------SHHHHHHHHT--TCCSEEEEESCCSCCCHHHHTSSTTCEEEEESS
T ss_pred --ccc------CC--------------CHHHHHHHHh--cCCCEEEEcCcccccCHHHHhhCcCCEEEecCc
Confidence 111 10 1245677788 899999976553 34445555555557776554
No 88
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=75.32 E-value=3.3 Score=32.25 Aligned_cols=51 Identities=18% Similarity=0.064 Sum_probs=35.1
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhH
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFK 51 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 51 (433)
|.+++.++-+.++..+..-.+.+.+.+|...++.|++|+++.+......++
T Consensus 2 ~~~~m~~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~ 52 (144)
T 2qs7_A 2 MAEEKKKKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAIT 52 (144)
T ss_dssp -----CCEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTB
T ss_pred ccccccCCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHh
Confidence 445554445556666677888899999999999999999999885443333
No 89
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=74.70 E-value=4 Score=33.81 Aligned_cols=41 Identities=17% Similarity=-0.031 Sum_probs=33.3
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
.+.+||++.-.|+.+=+.=...|.+.|+++|++|+++.++.
T Consensus 5 l~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 5 FAGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp CTTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 34578999888884433269999999999999999999884
No 90
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=74.46 E-value=7.5 Score=32.57 Aligned_cols=51 Identities=12% Similarity=-0.048 Sum_probs=41.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHH
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIA 55 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~ 55 (433)
.++.||++.+.++-.|-....-++..|..+|++|..+....-.+.+.+...
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~ 140 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAA 140 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHH
Confidence 346799999999999999999999999999999999987655555544433
No 91
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=73.79 E-value=17 Score=31.05 Aligned_cols=20 Identities=10% Similarity=0.258 Sum_probs=16.5
Q ss_pred hHHHHHHHHHhCCCCCcEEEEC
Q 013951 103 LQQPFENLFKEKTLKPCCIISD 124 (433)
Q Consensus 103 ~~~~l~~~l~~~~~~pD~vI~D 124 (433)
....+.+++++ .+||+|++-
T Consensus 85 ~~~~l~~~ir~--~~PdvV~t~ 104 (242)
T 2ixd_A 85 YIREIVKVIRT--YKPKLVFAP 104 (242)
T ss_dssp HHHHHHHHHHH--HCCSEEEEE
T ss_pred HHHHHHHHHHH--cCCCEEEEC
Confidence 45678888898 899999974
No 92
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=73.72 E-value=5.9 Score=30.29 Aligned_cols=45 Identities=7% Similarity=-0.047 Sum_probs=32.5
Q ss_pred CcEEEEEcC-C--CCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhH
Q 013951 7 QVHFLLLPY-L--APGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFK 51 (433)
Q Consensus 7 ~~~il~~~~-~--~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 51 (433)
.+|++|+.. + +.......+.+|...++.||+|+++.+......+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~ 62 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLD 62 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGB
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHh
Confidence 445555544 4 35677789999999999999999998775554443
No 93
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=73.51 E-value=21 Score=32.24 Aligned_cols=42 Identities=10% Similarity=0.093 Sum_probs=35.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhh
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARF 50 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~ 50 (433)
=+++.--|+.|--.-++.+|..++..|+.|.+++.+...+.+
T Consensus 48 LiiIaG~pG~GKTt~al~ia~~~a~~g~~Vl~fSlEms~~ql 89 (338)
T 4a1f_A 48 LVIIGARPSMGKTSLMMNMVLSALNDDRGVAVFSLEMSAEQL 89 (338)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCEEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCHHHH
Confidence 367777789999999999999999999999999998765543
No 94
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=73.45 E-value=5.7 Score=30.68 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=29.2
Q ss_pred CCCcEEEEEc--CCCCCChHHHHHHHHHHHHCCCEEEEEECCcch
Q 013951 5 ASQVHFLLLP--YLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 5 ~~~~~il~~~--~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
.+.+|++++- .-..-.+.-.+=++..|.++||+|++++++.-.
T Consensus 4 ~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAl 48 (157)
T 1kjn_A 4 ESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAAL 48 (157)
T ss_dssp --CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred ccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHH
Confidence 4455655543 224445555788999999999999999999433
No 95
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=73.26 E-value=33 Score=33.01 Aligned_cols=96 Identities=17% Similarity=0.198 Sum_probs=58.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhC---CCCeEEEEecCCCccCCCCCCCC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKS---GLQIRLIEIQFPWQEAGIPEGCE 83 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~ 83 (433)
.+|++++. +-.-.+.|++.|.+-|-+|..+.+....+..++........ +.+.....
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~~v~~--------------- 419 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNANKRWQKAMNKMLDASPYGRDSEVFI--------------- 419 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTCCHHHHHHHHHHHHHSTTCTTCEEEE---------------
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCCEEEE---------------
Confidence 46888873 34456788888888899998776554433333322211100 00111110
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHc-------CCCcEEE
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKF-------NVPRIIF 144 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~-------giP~v~~ 144 (433)
. . -...+.+.+++ .+||++|.+.. +..+|+++ |||++.+
T Consensus 420 ~------~-----------d~~~l~~~i~~--~~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 420 N------C-----------DLWHFRSLMFT--RQPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp S------C-----------CHHHHHHHHHH--HCCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred C------C-----------CHHHHHHHHhh--cCCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 0 0 02356777777 79999999863 57788888 9999874
No 96
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=72.90 E-value=21 Score=29.74 Aligned_cols=104 Identities=9% Similarity=0.026 Sum_probs=60.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCE 83 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (433)
+++||+++.+++.+. +.+|.+.+.+. +++|..+.+..-.....+..... ++.+..++. ...
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~-----gIp~~~~~~--------~~~- 69 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY-----GIPTFVVKR--------KPL- 69 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT-----TCCEEECCB--------TTB-
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc-----CCCEEEeCc--------ccC-
Confidence 356898888666444 45566666544 37888877642111112222222 566655421 110
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
. .+.+.+.+++ .+||++|+=.+. .-...+-+.+.-.++-++++
T Consensus 70 -----~--------------~~~~~~~L~~--~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 70 -----D--------------IEHISTVLRE--HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp -----C--------------HHHHHHHHHH--TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -----C--------------hHHHHHHHHH--hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 0 1467788888 899999977654 35566667777777776544
No 97
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=72.34 E-value=9.4 Score=31.22 Aligned_cols=38 Identities=16% Similarity=0.085 Sum_probs=33.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
+||++.-.|+.|-+ =...+.++|+++|++|.++.++.-
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A 39 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNA 39 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhH
Confidence 48999998998855 589999999999999999999843
No 98
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=71.51 E-value=15 Score=33.99 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=27.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++.+||+++-.+.. .+.+++++++.|++|.++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 35678999876653 466899999999999999764
No 99
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=70.67 E-value=7.3 Score=32.11 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=33.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEECCcch
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH-GAIVTIVTTPVNA 47 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r-GH~Vt~~~~~~~~ 47 (433)
+||++.-.|+.|-+. ...|.+.|+++ |++|.++.++.-.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~ 40 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAK 40 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHH
Confidence 378888888887766 99999999999 9999999998443
No 100
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=69.99 E-value=3 Score=34.33 Aligned_cols=42 Identities=7% Similarity=-0.065 Sum_probs=35.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcch
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
.+.+||++.-.|+.|=+. ...|.+.|.++|++|.++.++.-.
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~ 47 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAE 47 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHH
Confidence 346789998888887776 789999999999999999988443
No 101
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=69.55 E-value=5.1 Score=33.31 Aligned_cols=40 Identities=13% Similarity=-0.120 Sum_probs=31.8
Q ss_pred CCcEEEEEcCCCCCChHH-HHHHHHHHHHCCCEEEEEECCcc
Q 013951 6 SQVHFLLLPYLAPGHLIP-MFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P-~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
+.+||++.-.|+ +...- ...+.+.|+++|++|.++.++.-
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 456888888786 44554 78999999999999999999843
No 102
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=69.47 E-value=26 Score=30.42 Aligned_cols=42 Identities=14% Similarity=0.292 Sum_probs=28.5
Q ss_pred HHhHHHHHHHHHhCCCCCcEEEECCCCc----------chHHHHHHcCCCcEEE
Q 013951 101 HMLQQPFENLFKEKTLKPCCIISDMCFP----------WTVDTAAKFNVPRIIF 144 (433)
Q Consensus 101 ~~~~~~l~~~l~~~~~~pD~vI~D~~~~----------~~~~~A~~~giP~v~~ 144 (433)
......+.+++++ .+||+||+-.-.. .+..+++..|+++..+
T Consensus 131 ~~~~~~l~~~ir~--~~PdvV~t~~~~d~HpDH~~~~~a~~~A~~~~~~~~~~~ 182 (270)
T 3dfi_A 131 AAIREDIESMIAE--CDPTLVLTCVAIGKHPDHKATRDATLLAARERGIPLRLW 182 (270)
T ss_dssp HHHHHHHHHHHHH--HCCSEEEEECCTTCCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHH--cCCCEEEeCCCCCCChhHHHHHHHHHHHHHHcCCCeeEe
Confidence 3567788889999 8999999753221 2344556678876554
No 103
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=66.07 E-value=14 Score=35.38 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 013951 105 QPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIF 144 (433)
Q Consensus 105 ~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~ 144 (433)
.++.+.+++ .+||++|... ....+|+++|||++.+
T Consensus 407 ~el~~~i~~--~~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 407 YEFEEFVKR--IKPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH--HCCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHHh--cCCcEEEeCc---chhHHHHHcCCCEEec
Confidence 366777888 8999999974 4678999999999863
No 104
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=65.55 E-value=50 Score=27.24 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=18.9
Q ss_pred CCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecc
Q 013951 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGF 147 (433)
Q Consensus 116 ~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 147 (433)
.+||+||.|.... .+..+++.+ ++|++.++..
T Consensus 50 ~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~ 88 (233)
T 1ys7_A 50 NRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR 88 (233)
T ss_dssp SCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcC
Confidence 5788888876543 344444332 5777776543
No 105
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=64.30 E-value=9.6 Score=35.63 Aligned_cols=35 Identities=20% Similarity=0.394 Sum_probs=24.6
Q ss_pred HHHHHHHHhCCCCCcEEEE--CCCCcchHHHHHHcCCCc
Q 013951 105 QPFENLFKEKTLKPCCIIS--DMCFPWTVDTAAKFNVPR 141 (433)
Q Consensus 105 ~~l~~~l~~~~~~pD~vI~--D~~~~~~~~~A~~~giP~ 141 (433)
+.+.++.++ .++|.|+. |.....+..+|+++|+|.
T Consensus 65 ~~~~~~~~~--~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 DVVRQTFVE--FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HHHHHHHHH--SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HHHHHhhhh--cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 445666777 89999985 333335567889999994
No 106
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=63.10 E-value=7 Score=29.39 Aligned_cols=38 Identities=18% Similarity=0.026 Sum_probs=27.4
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHH---cCCCcEEEe
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAK---FNVPRIIFH 145 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~---~giP~v~~~ 145 (433)
+-.+.+++ .+||+||.|...+ -|..+++. .++|+|.++
T Consensus 44 eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 44 EALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 44456677 8999999999776 55666654 478987654
No 107
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=61.14 E-value=12 Score=28.53 Aligned_cols=40 Identities=13% Similarity=0.210 Sum_probs=29.7
Q ss_pred HHHHHhCCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecchH
Q 013951 108 ENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHGFSC 149 (433)
Q Consensus 108 ~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~~~ 149 (433)
.+.+++ .+||+||.|...+ -|..+++++ .+|+|.++....
T Consensus 50 l~~~~~--~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~ 98 (134)
T 3to5_A 50 LPMLKK--GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAK 98 (134)
T ss_dssp HHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCC
T ss_pred HHHHHh--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCC
Confidence 345566 6999999999876 677777754 589888776543
No 108
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=60.94 E-value=7.2 Score=32.43 Aligned_cols=42 Identities=21% Similarity=0.120 Sum_probs=32.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEECCcch
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQ-HGAIVTIVTTPVNA 47 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~-rGH~Vt~~~~~~~~ 47 (433)
.+++||++.-.|+.+=+. ...|.++|.+ +|++|.++.++.-.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHH
Confidence 456789999888887554 6999999999 89999999999443
No 109
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=60.09 E-value=77 Score=28.39 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=33.0
Q ss_pred cEEEEE-cCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchh
Q 013951 8 VHFLLL-PYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAA 48 (433)
Q Consensus 8 ~~il~~-~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~ 48 (433)
++|+|+ .-|+-|-..-...||..|+++|++|.++.......
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHN 57 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSSCH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCCCC
Confidence 455544 45678999999999999999999999999886543
No 110
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=60.04 E-value=5.7 Score=31.01 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++.||+++= .|++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence 456788773 36654 78899999999999999864
No 111
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=59.48 E-value=19 Score=35.15 Aligned_cols=52 Identities=10% Similarity=-0.006 Sum_probs=43.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHh
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARA 57 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~ 57 (433)
++.+|++.+.++-.|-....-++..|..+|++|..+....-.+.+.+.+...
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~~~ 148 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEV 148 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHc
Confidence 4679999999999999999999999999999999998775555555544443
No 112
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=59.47 E-value=10 Score=32.08 Aligned_cols=26 Identities=35% Similarity=0.321 Sum_probs=21.2
Q ss_pred CCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 18 PGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 18 ~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
.|.+ =.++|++|.++|++|++++.+.
T Consensus 28 SG~m--G~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHHCCCEEEEEeCCc
Confidence 5544 3678999999999999999773
No 113
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=58.01 E-value=55 Score=26.35 Aligned_cols=38 Identities=24% Similarity=0.357 Sum_probs=30.2
Q ss_pred EEEE-cCCCCCChHHHHHHHHHHHHCCCEEEEEECCcch
Q 013951 10 FLLL-PYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 10 il~~-~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
|+|+ +-++-|--.-...||..|+++|++|.++-.....
T Consensus 4 i~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~~ 42 (206)
T 4dzz_A 4 ISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQM 42 (206)
T ss_dssp EEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 4444 4467788888999999999999999999876443
No 114
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=57.85 E-value=96 Score=28.97 Aligned_cols=42 Identities=24% Similarity=0.154 Sum_probs=34.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEECCcchhhh
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQ-HGAIVTIVTTPVNAARF 50 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~-rGH~Vt~~~~~~~~~~~ 50 (433)
-+++.-.|+.|-..-++.+|...+. .|..|.+++.+...+.+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l 244 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQL 244 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHH
Confidence 4677777899999999999999987 48999999998655433
No 115
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=57.82 E-value=18 Score=30.55 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=36.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
..+++|++.--|+-|-..-++.+|..|+++|+.|.++....
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34678999999999999999999999999999999887764
No 116
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=57.69 E-value=87 Score=26.49 Aligned_cols=41 Identities=22% Similarity=0.111 Sum_probs=26.5
Q ss_pred CCCCCC-CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 1 MASEAS-QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 1 m~~~~~-~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|...++ ..|.++++.. .|-+ =.++|++|+++|++|.++.-.
T Consensus 1 m~~~~~l~~k~vlVTGa-s~gi--G~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 1 MAGRWNLEGCTALVTGG-SRGI--GYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp -CCTTCCTTCEEEEESC-SSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCccCCCCCEEEEECC-CcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 444432 2356777744 4433 357899999999999887643
No 117
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=57.57 E-value=82 Score=29.52 Aligned_cols=42 Identities=10% Similarity=0.126 Sum_probs=36.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhh
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARF 50 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~ 50 (433)
-+++...|+.|-..-++.+|...+.+|..|.+++.+...+.+
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ql 240 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKKEN 240 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTTHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHHHH
Confidence 477778899999999999999999999999999988665443
No 118
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=57.47 E-value=90 Score=26.60 Aligned_cols=125 Identities=10% Similarity=0.071 Sum_probs=66.5
Q ss_pred CcEEEEEcCC--CCCChHHHHHHHHHHHHCCCEEEEEEC---Cc--chhhhHHHHHHhhhCCCCeEEEEecCCCccCCCC
Q 013951 7 QVHFLLLPYL--APGHLIPMFDIARLLAQHGAIVTIVTT---PV--NAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIP 79 (433)
Q Consensus 7 ~~~il~~~~~--~~GH~~P~l~La~~L~~rGH~Vt~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 79 (433)
.++.+|++.. .-|-..-...|++.|+++|++|.++-+ .. ...... ..... .+.......+-+ .
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~-~~~~~--~g~~~~~~~~~~-------~ 94 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLA-EVGRL--AGVTQLAGLARY-------P 94 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHH-HHHHH--HCCCEEEEEEEC-------S
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHH-HHHHH--cCCCCCCCCeeE-------C
Confidence 4454554433 457778889999999999999999963 11 001111 11111 121111111111 0
Q ss_pred CCCCCCCCCCCccHHHHHHHH-HHhHHHHHHHHHhCCCCCcEEEECCCC----------cchHHHHHHcCCCcEEEecch
Q 013951 80 EGCENCDLLPTTDFARFMKSL-HMLQQPFENLFKEKTLKPCCIISDMCF----------PWTVDTAAKFNVPRIIFHGFS 148 (433)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~pD~vI~D~~~----------~~~~~~A~~~giP~v~~~~~~ 148 (433)
.. . ........... ....+.+.+.+++...+.|++|.|.-. .....+|+.++.|++.+....
T Consensus 95 ~p------~-sP~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 95 QP------M-APAAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp SS------S-CHHHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred CC------C-ChHHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 00 0 00010000000 012345666666656799999998731 245689999999999986554
No 119
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=57.28 E-value=1e+02 Score=27.17 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=56.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchh-------hhHHHHHHhhhCCCCeEEEEecCCCccCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAA-------RFKTVIARAIKSGLQIRLIEIQFPWQEAGIPE 80 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (433)
+||+|+-.|. ......++|.++||+|..+.+..... .+++..... ++.+... .
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~~d~~~g~~~~~~v~~~A~~~-----gIpv~~~----------~ 60 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER-----GIPVYAP----------D 60 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH-----TCCEECC----------S
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcCCCCCCCCcCccHHHHHHHHc-----CCCEECC----------C
Confidence 4777775432 23455677888899998887764332 133333322 4444321 1
Q ss_pred CCCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 81 GCENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
. .. .+.+.+.+++ .+||++|+=.+. .-...+-......++-++++
T Consensus 61 ~------~~--------------~~~~~~~l~~--~~~Dliv~~~y~~ilp~~il~~~~~g~iNiHpS 106 (305)
T 2bln_A 61 N------VN--------------HPLWVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (305)
T ss_dssp C------CC--------------SHHHHHHHHH--TCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred c------CC--------------cHHHHHHHHh--cCCCEEEEeccccccCHHHHhcCcCCEEEecCC
Confidence 0 00 1245667788 899999976553 34455556666677777665
No 120
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=57.25 E-value=31 Score=27.45 Aligned_cols=57 Identities=14% Similarity=0.053 Sum_probs=44.4
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEECCcchhhhHHHHHHhhhCC
Q 013951 4 EASQVHFLLLPYLAPGHLIPMFDIARLLAQHG--AIVTIVTTPVNAARFKTVIARAIKSG 61 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~ 61 (433)
+.+..+|.++. ++.+++.-+...++.|.+-| |+|.+++....-+++.++..+....+
T Consensus 9 ~~~~P~V~Iim-GS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g 67 (173)
T 4grd_A 9 THSAPLVGVLM-GSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERG 67 (173)
T ss_dssp CCSSCSEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTT
T ss_pred CCCCCeEEEEe-CcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcC
Confidence 35667899988 89999999999999999886 77888888776666666666553333
No 121
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=56.61 E-value=19 Score=26.26 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|...+ .+..+++++ ++|++.++...
T Consensus 37 ~al~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 37 IALEKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp HHHHHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred HHHHHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCC
Confidence 33445566 7999999998665 566666654 58888877654
No 122
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=55.96 E-value=76 Score=29.90 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=28.9
Q ss_pred HHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 013951 106 PFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIF 144 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~ 144 (433)
.+++.+++ .+||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~--~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKN--EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHH--SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 57788888 89999998864 578899999999975
No 123
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=55.60 E-value=13 Score=32.64 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|||++ + |+.|-+= ..|+++|.++||+|+.++-.
T Consensus 1 MkILV-T-GatGfIG--~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLV-G-GGTGFIG--TALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEE-E-TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEE-E-CCCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 46554 3 6667665 46899999999999999743
No 124
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=55.30 E-value=26 Score=29.98 Aligned_cols=37 Identities=19% Similarity=0.091 Sum_probs=28.4
Q ss_pred cEEEEEcCCCC----------CC-hHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAP----------GH-LIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~----------GH-~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+||+++..... |- ..=++.--..|.+.|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 58888877642 22 444777888999999999999976
No 125
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=55.28 E-value=9.3 Score=30.98 Aligned_cols=39 Identities=18% Similarity=0.124 Sum_probs=32.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcch
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
+||++.-.|+.|=+ =...+.+.|+++|++|.++.++.-.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 47888887887666 5789999999999999999998543
No 126
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=54.85 E-value=60 Score=27.17 Aligned_cols=21 Identities=10% Similarity=0.377 Sum_probs=16.9
Q ss_pred hHHHHHHHHHhCCCCCcEEEECC
Q 013951 103 LQQPFENLFKEKTLKPCCIISDM 125 (433)
Q Consensus 103 ~~~~l~~~l~~~~~~pD~vI~D~ 125 (433)
....+.+++++ .+||+|++..
T Consensus 83 ~~~~l~~~ir~--~~P~~V~t~~ 103 (227)
T 1uan_A 83 QRLKLAQALRR--LRPRVVFAPL 103 (227)
T ss_dssp HHHHHHHHHHH--HCEEEEEEEC
T ss_pred HHHHHHHHHHH--hCCCEEEeCC
Confidence 45678888898 8999999753
No 127
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=53.78 E-value=82 Score=28.29 Aligned_cols=100 Identities=11% Similarity=0.092 Sum_probs=59.6
Q ss_pred cEEEEEcCCCCC--C--hHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCC
Q 013951 8 VHFLLLPYLAPG--H--LIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCE 83 (433)
Q Consensus 8 ~~il~~~~~~~G--H--~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (433)
.-|++.|..+.. . ..-+.+|++.|.++|++|.++..+...+..++..... +-....+ ..
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~-----~~~~~~l---------~g--- 248 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQM-----ETKPIVA---------TG--- 248 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTC-----SSCCEEC---------TT---
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhc-----ccccEEe---------eC---
Confidence 456777755432 2 3358999999998899999877765555444332211 0011111 00
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecc
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~ 147 (433)
.. -..++..+++ +-|++|+- ..+...+|..+|+|+|.++..
T Consensus 249 ------~~-----------sl~e~~ali~----~a~~~i~~--DsG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 249 ------KF-----------QLGPLAAAMN----RCNLLITN--DSGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp ------CC-----------CHHHHHHHHH----TCSEEEEE--SSHHHHHHHTTTCCEEEECSS
T ss_pred ------CC-----------CHHHHHHHHH----hCCEEEEC--CCCHHHHHHhcCCCEEEEECC
Confidence 00 0124445553 67888864 246788899999999997543
No 128
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=53.68 E-value=77 Score=28.58 Aligned_cols=41 Identities=15% Similarity=0.153 Sum_probs=33.0
Q ss_pred CcEEEEE-cCCCCCChHHHHHHHHHHH--HCCCEEEEEECCcch
Q 013951 7 QVHFLLL-PYLAPGHLIPMFDIARLLA--QHGAIVTIVTTPVNA 47 (433)
Q Consensus 7 ~~~il~~-~~~~~GH~~P~l~La~~L~--~rGH~Vt~~~~~~~~ 47 (433)
..+|+|+ .-|+-|--.-...||..|+ ++|++|.++......
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~~~ 60 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDPAH 60 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSSC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCCC
Confidence 3455555 4577899999999999999 899999999988543
No 129
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=53.01 E-value=78 Score=29.68 Aligned_cols=40 Identities=13% Similarity=0.150 Sum_probs=27.2
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
|+..| .+||+++- .|. -...+++++++.|++|..+.+...
T Consensus 1 m~~~~-~k~ILI~g---~g~--~~~~i~~a~~~~G~~vv~v~~~~~ 40 (461)
T 2dzd_A 1 METRR-IRKVLVAN---RGE--IAIRVFRACTELGIRTVAIYSKED 40 (461)
T ss_dssp --CCC-CSEEEECS---CHH--HHHHHHHHHHHHTCEEEEEECGGG
T ss_pred CCCCc-CcEEEEEC---CcH--HHHHHHHHHHHcCCEEEEEECCcc
Confidence 55544 46888873 232 357899999999999999876543
No 130
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=52.85 E-value=38 Score=29.04 Aligned_cols=38 Identities=18% Similarity=0.136 Sum_probs=26.8
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 4 EASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+..|+++++.++ |-+ =.++|++|+++|++|.++...
T Consensus 22 ~m~~~k~vlITGas-~gI--G~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 22 SMSDTPVVLVTGGS-RGI--GAAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp --CCSCEEEETTTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred hccCCCEEEEECCC-chH--HHHHHHHHHHCCCEEEEEcCC
Confidence 35556788888554 434 368999999999999877543
No 131
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=52.42 E-value=81 Score=25.65 Aligned_cols=38 Identities=13% Similarity=-0.036 Sum_probs=28.9
Q ss_pred HHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEecchH
Q 013951 107 FENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHGFSC 149 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~~~~ 149 (433)
..+.+++ .+.|+||.|.. +..+|+++|+|.+.+.+...
T Consensus 134 ~i~~l~~--~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 134 LISKVKT--ENIKIVVSGKT---VTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp HHHHHHH--TTCCEEEECHH---HHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHH--CCCeEEECCHH---HHHHHHHcCCcEEEEecCHH
Confidence 3334455 69999999854 58999999999999776443
No 132
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=52.38 E-value=24 Score=29.49 Aligned_cols=108 Identities=13% Similarity=0.090 Sum_probs=61.9
Q ss_pred EEEEEcCCCCCChHH----HHHHHHHHHHC-CCEEEEEECCcchhhhHHHHHHhhhCCCCe-EEEEecCCCccCCCCCCC
Q 013951 9 HFLLLPYLAPGHLIP----MFDIARLLAQH-GAIVTIVTTPVNAARFKTVIARAIKSGLQI-RLIEIQFPWQEAGIPEGC 82 (433)
Q Consensus 9 ~il~~~~~~~GH~~P----~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~ 82 (433)
.|+++.--..|.++| ++.-|++|++. |-+|+.++.....+...+....+ |. +.+.+..+ .+
T Consensus 5 ~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~-----Gad~v~~v~~~--------~~ 71 (217)
T 3ih5_A 5 NLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPY-----GVDKLHVFDAE--------GL 71 (217)
T ss_dssp CEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGG-----TCSEEEEEECG--------GG
T ss_pred cEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhc-----CCCEEEEecCc--------cc
Confidence 577777656676665 57778888764 77887776443222222222111 32 23333211 01
Q ss_pred CCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc---chHHHHHHcCCCcEEE
Q 013951 83 ENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP---WTVDTAAKFNVPRIIF 144 (433)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~---~~~~~A~~~giP~v~~ 144 (433)
... + .......+.+++++ .+||+|++-.-.. .+..+|.++++|.+.-
T Consensus 72 ~~~------~-------~~~~a~~l~~~i~~--~~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 72 YPY------T-------SLPHTSILVNLFKE--EQPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp SSC------C-------HHHHHHHHHHHHHH--HCCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred ccC------C-------HHHHHHHHHHHHHh--cCCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 110 0 01234566677777 7999999886443 5578999999998763
No 133
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=51.92 E-value=15 Score=30.99 Aligned_cols=124 Identities=12% Similarity=0.015 Sum_probs=67.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHH-HHCCCEEEEEECCcchhhhHHHHHHhhh------CCCCeEEEEecCCCccCCCCCC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLL-AQHGAIVTIVTTPVNAARFKTVIARAIK------SGLQIRLIEIQFPWQEAGIPEG 81 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L-~~rGH~Vt~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~~ 81 (433)
-+++.-.|+.|--.-++.+|... .+.|..|.+++.+...+.+......... ....+.+.... ...
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~--------~~~ 103 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRREMASFGWDFEKYEKEGKIAIVDGV--------SSV 103 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHHTTTCCHHHHHHTTSEEEEC-------------
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHHHHHHcCCChHHHHhcCcchhhhhH--------HHH
Confidence 46777778999999999988764 4558899999988665544333221100 00012222110 000
Q ss_pred CCCCCCCCCccHHHH--HHHHHHhHHHHHHHHHhCCCCCcEEEECCCCcc----------------hHHHHHHcCCCcEE
Q 013951 82 CENCDLLPTTDFARF--MKSLHMLQQPFENLFKEKTLKPCCIISDMCFPW----------------TVDTAAKFNVPRII 143 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~~----------------~~~~A~~~giP~v~ 143 (433)
.. ......... ..........+.+.+++ .+++++|.|.+... ...+|+++|++++.
T Consensus 104 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vviD~~~~l~~~~~~~~~~~~~~~~L~~~a~~~~i~vi~ 177 (251)
T 2zts_A 104 VG----LPSEEKFVLEDRFNVDNFLRYIYRVVKA--INAKRLVIDSIPSIALRLEEERKIREVLLKLNTILLEMGVTTIL 177 (251)
T ss_dssp ------------------CCHHHHHHHHHHHHHH--TTCSEEEEECHHHHHHHSSSGGGHHHHHHHHHHHHHHHCCEEEE
T ss_pred hh----cccchhccccccccHHHHHHHHHHHHHh--cCCcEEEEEcHHHHhhhccChHHHHHHHHHHHHHHHHcCCCeEE
Confidence 00 000000000 00112344566677777 89999999976431 23567888999888
Q ss_pred Eec
Q 013951 144 FHG 146 (433)
Q Consensus 144 ~~~ 146 (433)
++-
T Consensus 178 ~~q 180 (251)
T 2zts_A 178 TTE 180 (251)
T ss_dssp EEC
T ss_pred EEE
Confidence 754
No 134
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=51.78 E-value=26 Score=29.91 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCCCC-----------hHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGH-----------LIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH-----------~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++||+++.....+. ..=+..-...|.+.|++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46888888764221 234777788899999999999976
No 135
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=51.33 E-value=16 Score=28.32 Aligned_cols=36 Identities=22% Similarity=0.247 Sum_probs=26.2
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 4 EASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.....+|+++=. |.+- ..+|+.|.++|++|+++...
T Consensus 16 ~~~~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 16 KQKSKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp -CCCCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 345678888843 5443 56889999999999999754
No 136
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=50.30 E-value=18 Score=31.19 Aligned_cols=42 Identities=17% Similarity=0.157 Sum_probs=34.7
Q ss_pred CCCcEEEEEcCC---CCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 5 ASQVHFLLLPYL---APGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 5 ~~~~~il~~~~~---~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
++.+|..|++.+ +.|-=.-.-.|+..|++||+.|+..-..++
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 467899999987 557777899999999999999999976544
No 137
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=50.19 E-value=57 Score=30.51 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
|+.+||++.- .|. -.+.+++++++.|++|.++.+..
T Consensus 4 m~~~kiLI~g---~g~--~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 4 MEIKSILIAN---RGE--IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp TCCCEEEECC---CHH--HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred cccceEEEEC---CCH--HHHHHHHHHHHcCCEEEEEEcCc
Confidence 4556888853 232 46789999999999999886553
No 138
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=50.06 E-value=12 Score=33.50 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=37.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhh
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAAR 49 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~ 49 (433)
+||+++-..+.|++.=...+.++|+++ +.+|++++.+...+.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l 44 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI 44 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHH
Confidence 489999999999999999999999987 999999999865543
No 139
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=49.92 E-value=31 Score=25.66 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=27.8
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecchH
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHGFSC 149 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~~~ 149 (433)
..+.+++ .+||+||.|.... .+..+++.+ .+|++.++....
T Consensus 40 al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 40 ALQQIYK--NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGD 89 (136)
T ss_dssp HHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTC
T ss_pred HHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCC
Confidence 3445566 7999999998665 455555533 588888766543
No 140
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=48.61 E-value=43 Score=26.69 Aligned_cols=62 Identities=19% Similarity=0.156 Sum_probs=43.5
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEECCcchhhhHHHHHHhhhCCCC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHG--AIVTIVTTPVNAARFKTVIARAIKSGLQ 63 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~ 63 (433)
|..+.+..+|.+++ ++.+++.-+...++.|.+-| |+|.+++....-+++.++..+....+..
T Consensus 1 ~~~~~~~~~V~Iim-gS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ 64 (174)
T 3lp6_A 1 MTPAGERPRVGVIM-GSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLE 64 (174)
T ss_dssp -----CCCSEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCCCeEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCC
Confidence 44555567888888 89999999999999999876 4788888776666777766555444443
No 141
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=48.29 E-value=15 Score=28.87 Aligned_cols=37 Identities=19% Similarity=0.245 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
..+++++..++ | +.|++.+++.|.++|.+|+++ ...+
T Consensus 23 ~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 45788888554 3 999999999999999999999 5543
No 142
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=47.53 E-value=13 Score=33.18 Aligned_cols=23 Identities=13% Similarity=-0.086 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHCCCEEEEEECCc
Q 013951 23 PMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 23 P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
-=.++|+++.++|++|++++.+.
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCEEEEEecCC
Confidence 34678999999999999998764
No 143
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=47.31 E-value=46 Score=27.47 Aligned_cols=49 Identities=14% Similarity=0.017 Sum_probs=34.7
Q ss_pred chhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEE
Q 013951 267 VPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWV 315 (433)
Q Consensus 267 ~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~ 315 (433)
.+-+.+|+.....+.++||..+|......+.+....++|++.+..+.+.
T Consensus 15 ~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 15 VPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3445667644444669999888765455667888899999999876543
No 144
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=47.24 E-value=26 Score=26.43 Aligned_cols=41 Identities=15% Similarity=0.218 Sum_probs=27.6
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc---------CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF---------NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~---------giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+++.+ .+|++.++...
T Consensus 49 ~al~~~~~--~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 49 QVLDAMAE--EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp HHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 33445566 7999999998665 456666544 27888876543
No 145
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=44.97 E-value=33 Score=26.39 Aligned_cols=96 Identities=11% Similarity=0.100 Sum_probs=57.3
Q ss_pred EEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCCCCCCC
Q 013951 11 LLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENCDLLPT 90 (433)
Q Consensus 11 l~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 90 (433)
+|++... .+-.-++.+|+.|.+.|+++. ++......+++ . ++.+..+.. .+++-.. .
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~lGf~i~--AT~GTa~~L~~----~-----Gi~v~~v~k------~~egg~~-~---- 83 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHNEGFKLF--ATEATSDWLNA----N-----NVPATPVAW------PSQEGQN-P---- 83 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHTTTCEEE--EEHHHHHHHHH----T-----TCCCEEECC------GGGC---------
T ss_pred EEEEecc-cchHHHHHHHHHHHHCCCEEE--ECchHHHHHHH----c-----CCeEEEEEe------ccCCCcc-c----
Confidence 4555433 456779999999999999743 44433333333 2 555555531 1111000 0
Q ss_pred ccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC--------cchHHHHHHcCCCcEE
Q 013951 91 TDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF--------PWTVDTAAKFNVPRII 143 (433)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~--------~~~~~~A~~~giP~v~ 143 (433)
..+.+.+.+++ .+.|+||.-.-. +.....|-.+|||++.
T Consensus 84 ------------~~~~i~d~i~~--g~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 84 ------------SLSSIRKLIRD--GSIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp -------------CBCHHHHHHT--TSCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred ------------ccccHHHHHHC--CCceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEc
Confidence 00257788888 899999985432 1345668889999875
No 146
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=44.66 E-value=51 Score=24.08 Aligned_cols=39 Identities=15% Similarity=0.087 Sum_probs=31.4
Q ss_pred CCCCcEEEEEcCCCCCChHH-HHHHHHHHHHCCCEEEEEE
Q 013951 4 EASQVHFLLLPYLAPGHLIP-MFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P-~l~La~~L~~rGH~Vt~~~ 42 (433)
+.+++||+++|..+.|.-.= ...|-+.+.++|.++.+-.
T Consensus 18 ~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 18 QGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 34567999999999999874 6788888889999875554
No 147
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=44.42 E-value=35 Score=24.58 Aligned_cols=42 Identities=21% Similarity=0.429 Sum_probs=27.7
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHH----cCCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAK----FNVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~----~giP~v~~~~~~~ 149 (433)
...+.+++ .+||+||.|.... .+..+++. .++|.+.++....
T Consensus 37 ~al~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~ 84 (120)
T 3f6p_A 37 EAVEMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDS 84 (120)
T ss_dssp HHHHHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSC
T ss_pred HHHHHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCC
Confidence 34455666 7999999998665 34445443 3688888765443
No 148
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=44.27 E-value=74 Score=27.37 Aligned_cols=59 Identities=17% Similarity=0.181 Sum_probs=33.2
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEE
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIE 68 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (433)
|...|+++++.++.| + =.++|++|+++|++|.++.-. .+..++..+.....+..+.+..
T Consensus 21 m~~~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~--~~~~~~~~~~l~~~~~~~~~~~ 79 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-I--GLAVARTLAARGIAVYGCARD--AKNVSAAVDGLRAAGHDVDGSS 79 (279)
T ss_dssp ----CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHTTTCCEEEEE
T ss_pred ccCCCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEEE
Confidence 445578888865543 3 367899999999999887643 3333333333322233344443
No 149
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=43.96 E-value=12 Score=32.65 Aligned_cols=27 Identities=7% Similarity=0.026 Sum_probs=23.4
Q ss_pred eeeecccchhhHHHHHHc------CCcEEeccc
Q 013951 361 GGFLTHCGWNSSLEGISA------GVQMLTWPL 387 (433)
Q Consensus 361 ~~~ItHGG~gs~~eal~~------GvP~v~~P~ 387 (433)
+++|.=||=||+.+++.. ++|++.+|.
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 349999999999998764 899999986
No 150
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=43.90 E-value=22 Score=30.68 Aligned_cols=50 Identities=10% Similarity=0.010 Sum_probs=40.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHH--------HHHC-CCEEEEEECCcchhhhHHHHH
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARL--------LAQH-GAIVTIVTTPVNAARFKTVIA 55 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~--------L~~r-GH~Vt~~~~~~~~~~~~~~~~ 55 (433)
++.+|++.+.++-.|-....-++.. |..+ |++|..+....-.+.+.+...
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~ 177 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAV 177 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHH
Confidence 4678999999999999999999987 9999 999999987655555544443
No 151
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=43.85 E-value=20 Score=31.50 Aligned_cols=40 Identities=23% Similarity=0.261 Sum_probs=25.2
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|+...++++|++. |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 M~~~~~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 1 MQRNTLKHRILIT--GGAGFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp ------CCEEEEE--TTTSHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCcccCCCeEEEE--CCCChHH--HHHHHHHHHCCCEEEEEecC
Confidence 4444445566554 6667654 57899999999999998644
No 152
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=43.80 E-value=19 Score=30.15 Aligned_cols=42 Identities=14% Similarity=0.082 Sum_probs=29.7
Q ss_pred HHHHHHHHHhCCCCCcEEEECCCCcc---hHH----HHHHcCCCcEEEe
Q 013951 104 QQPFENLFKEKTLKPCCIISDMCFPW---TVD----TAAKFNVPRIIFH 145 (433)
Q Consensus 104 ~~~l~~~l~~~~~~pD~vI~D~~~~~---~~~----~A~~~giP~v~~~ 145 (433)
.+.+.++++.+..+||++++|..... ... +...+++|+|-+.
T Consensus 90 ~P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 90 GPLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred hHHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 35666777776679999999997763 333 4445589999863
No 153
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=43.33 E-value=27 Score=29.99 Aligned_cols=42 Identities=19% Similarity=0.105 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchh
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAA 48 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~ 48 (433)
++++|||+.-=-+. |.--..+|+++|.+ +|+|+++.+..++.
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 45688887764444 55568899999987 89999999986654
No 154
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=43.17 E-value=50 Score=23.80 Aligned_cols=39 Identities=13% Similarity=0.101 Sum_probs=31.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..+||+++|..+.|--.=.-.+=+.+.++|.++.+-...
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 356899999998877777778888889999998776544
No 155
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=42.79 E-value=21 Score=33.77 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 013951 106 PFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIF 144 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~ 144 (433)
.+++++++ .+||++|.... +..+|+++|||++.+
T Consensus 366 ~le~~i~~--~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARA--GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 46677878 89999999864 678999999999874
No 156
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=42.55 E-value=56 Score=32.47 Aligned_cols=98 Identities=13% Similarity=0.093 Sum_probs=56.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchh-------hhHHHHHHhhhCCCCeEEEEecCCCccCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAA-------RFKTVIARAIKSGLQIRLIEIQFPWQEAGIPE 80 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (433)
+||+|+-.+..| ....++|.++||+|..+.+..... .+++..... ++.+... .
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~~~~~i~~v~t~~~~~~~~~~~~~~~~~a~~~-----~ip~~~~----------~ 60 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER-----GIPVYAP----------D 60 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHHTTCEEEEEECCCC--------CCHHHHHHHH-----TCCEECC----------S
T ss_pred CEEEEEEeCHHH-----HHHHHHHHhCCCCEEEEEeCCCCCccCcCccHHHHHHHHc-----CCCEecc----------C
Confidence 367777644322 333567777899999888764432 133333332 4444321 1
Q ss_pred CCCCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 81 GCENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
. .. .+.+.+.+++ .+||++|+=.+. .-...+-+.....++-++++
T Consensus 61 ~------~~--------------~~~~~~~l~~--~~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 61 N------VN--------------HPLWVERIAQ--LSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp C------TT--------------SHHHHHHHHH--HCCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred C------CC--------------cHHHHHHHHh--cCCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 0 00 1245567777 799999976553 35566667677777887765
No 157
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=42.54 E-value=30 Score=29.86 Aligned_cols=33 Identities=27% Similarity=0.330 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+++|++. |+ |-+ =..|++.|.++||+|+.++-.
T Consensus 3 ~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIA--GC-GDL--GLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4567766 35 744 457899999999999999754
No 158
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=41.70 E-value=47 Score=29.77 Aligned_cols=81 Identities=10% Similarity=-0.086 Sum_probs=46.7
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCce
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVG 361 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~ 361 (433)
.|+++-.|-.....+.+..+...|+..+..+.+........ . ..+ -+.......++
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~-------a-~~~---------------~~~~~~~~~d~- 83 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGD-------A-TLE---------------AERAMHENYDV- 83 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTH-------H-HHH---------------HHHHTTTTCSE-
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcch-------H-HHH---------------HHHHhhcCCCE-
Confidence 45566544433333556678888888877655443222110 0 000 01111123455
Q ss_pred eeecccchhhHHHHHH------cCCcEEeccc
Q 013951 362 GFLTHCGWNSSLEGIS------AGVQMLTWPL 387 (433)
Q Consensus 362 ~~ItHGG~gs~~eal~------~GvP~v~~P~ 387 (433)
+|.-||=||+.|++. .++|+.++|.
T Consensus 84 -vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 84 -LIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp -EEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred -EEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 999999999999753 5789999997
No 159
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=41.26 E-value=1.4e+02 Score=24.08 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=38.6
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc---chhhhHHHHHHhhhCCCCeEEEEec
Q 013951 10 FLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV---NAARFKTVIARAIKSGLQIRLIEIQ 70 (433)
Q Consensus 10 il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~ 70 (433)
|+|+..+...+-.....+++.|++.|++|.++.... +.+ ++.+.+... .+.+-.++.++
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~~n-~~~~s~~~~~~ 171 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDAAN-SSDSCHLVSIP 171 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHHHC-STTCCEEEEEC
T ss_pred EEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHhcc-CCCceEEEEec
Confidence 455555555677788999999999999999986443 223 555554432 23345666664
No 160
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=41.04 E-value=13 Score=32.13 Aligned_cols=29 Identities=14% Similarity=0.236 Sum_probs=24.8
Q ss_pred CCCceeeecccchhhHHHHHHc---CCcEEeccc
Q 013951 357 HPAVGGFLTHCGWNSSLEGISA---GVQMLTWPL 387 (433)
Q Consensus 357 ~~~~~~~ItHGG~gs~~eal~~---GvP~v~~P~ 387 (433)
.+++ +|+-||=||+++++.. ++|+++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~ 72 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA 72 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC
Confidence 3555 9999999999999876 899999984
No 161
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=40.86 E-value=23 Score=27.14 Aligned_cols=114 Identities=11% Similarity=0.148 Sum_probs=61.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhh--hHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAAR--FKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCEN 84 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 84 (433)
..+++++..++ =+.|++.+++.|.++|.+|+++ .....+. +++..+.. ...+.+..... .+. +.
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R~~~~~~~~~el~~l---~~~~~~~~~~~------~~~--~~ 83 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVTFEPMVILKEELEKA---VTRHIVEPVPL------NPN--QD 83 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEEEGGGCCSHHHHHTT---SSEEEEEEECC------CTT--SC
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeCCHHHhhHHHHHHHH---HhheEEEEeec------ccc--cC
Confidence 45788887554 4899999999999999999998 5443332 23333332 11222221110 000 00
Q ss_pred CCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCc-EEEECCC--CcchHHHHHHcCCCcEE
Q 013951 85 CDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPC-CIISDMC--FPWTVDTAAKFNVPRII 143 (433)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD-~vI~D~~--~~~~~~~A~~~giP~v~ 143 (433)
.+ ..-..... ...+.+.+++.+ .+.| +.+|-+- .-+....+++.|||..-
T Consensus 84 ~~----d~~~g~~G---~v~~~l~~~~~~--~~~~~vy~CGP~~Mm~av~~~l~~~~~~~~~ 136 (142)
T 3lyu_A 84 FL----ANMKNVSQ---RLKEKVRELLES--EDWDLVFMVGPVGDQKQVFEVVKEYGVPMLE 136 (142)
T ss_dssp HH----HHHHHHHH---HHHHHHHHHHHS--SCCSEEEEESCHHHHHHHHHHHHHHTCCBC-
T ss_pred CC----CCCCCCcc---chhHHHHHhccc--CCCCEEEEECCHHHHHHHHHHHHHcCCchhh
Confidence 00 00111111 122345555555 4556 5667663 33667788899999753
No 162
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=40.68 E-value=49 Score=24.48 Aligned_cols=39 Identities=10% Similarity=0.215 Sum_probs=26.1
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecc
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHGF 147 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 147 (433)
..+.+++ .+||+||.|.... .+..+++.+ .+|++.++..
T Consensus 39 al~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 39 CLEALNA--TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp HHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred HHHHHhc--cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 3345566 7899999998654 455555543 5788887654
No 163
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=40.46 E-value=37 Score=29.68 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=30.7
Q ss_pred CCCcEEEEEcCCCCCChHHH--HHHHHHHHHCC-CEEEEEECC
Q 013951 5 ASQVHFLLLPYLAPGHLIPM--FDIARLLAQHG-AIVTIVTTP 44 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~--l~La~~L~~rG-H~Vt~~~~~ 44 (433)
.++.|||++. +..+|-.+. -.|++.|.+.| .+|++....
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 3678999995 556896553 67888888888 999999865
No 164
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=40.44 E-value=17 Score=31.98 Aligned_cols=30 Identities=7% Similarity=0.034 Sum_probs=25.0
Q ss_pred cCCCceeeecccchhhHHHHHH----cCCcEEeccc
Q 013951 356 SHPAVGGFLTHCGWNSSLEGIS----AGVQMLTWPL 387 (433)
Q Consensus 356 ~~~~~~~~ItHGG~gs~~eal~----~GvP~v~~P~ 387 (433)
..+++ +|.-||=||+.+++. .++|++.++.
T Consensus 62 ~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 62 QQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34566 999999999999874 3899999984
No 165
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=40.35 E-value=22 Score=29.26 Aligned_cols=56 Identities=7% Similarity=-0.171 Sum_probs=40.4
Q ss_pred HHcCCcEEeccc----ccccchhHHHhhhhccceEEeeee--c---------cCCcccccchhhcccccccc
Q 013951 376 ISAGVQMLTWPL----FADQFCNEKLIVNVLRIGVSVGVE--V---------DLPITTSNYLCKISCNSQAQ 432 (433)
Q Consensus 376 l~~GvP~v~~P~----~~DQ~~na~~v~e~~G~G~~l~~~--~---------~~~~~l~~ai~~il~~~~~~ 432 (433)
+..++|+|++|- ...++.|-.++ .+.|+=+..... . .+.+.+.++|.++|++.+.|
T Consensus 120 Lk~~~plvl~Pamn~~m~~h~~Nm~~L-~~~G~~i~~P~~~~~~~~~p~s~~a~~~~i~~tv~~al~~~~~~ 190 (201)
T 3lqk_A 120 LRNGKPVVVGISTNDALGLNGINIMRL-MATKNIYFIPFGQDNPQVKPNSLVARMEALPETIEAALRGQQYQ 190 (201)
T ss_dssp HHTTCCEEEEEEETTTTTTTHHHHHHH-HTSTTEEECCEEESCTTTCTTCEEECGGGHHHHHHHHHTTCCCS
T ss_pred hhcCCCEEEEECCChhHHHhHHHHHHH-HHCCCEEECCCCccccccCCCcccCCHHHHHHHHHHHHhcCCCC
Confidence 567999999994 45778899999 599976554432 1 23367778888888876554
No 166
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=39.94 E-value=1.3e+02 Score=25.35 Aligned_cols=33 Identities=15% Similarity=-0.011 Sum_probs=24.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++.++. -+ =.++|+.|.++|++|.++.-
T Consensus 7 ~k~vlVTGas~-GI--G~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGD-YI--GAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCc-hH--HHHHHHHHHHCCCEEEEEeC
Confidence 45677775554 33 36899999999999988864
No 167
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=39.42 E-value=41 Score=27.03 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++|++. ++.|-+ =..|+++|.++||+|+.++-.
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 455544 555655 367889999999999998754
No 168
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=39.41 E-value=81 Score=28.13 Aligned_cols=78 Identities=13% Similarity=-0.080 Sum_probs=46.7
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCce
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVG 361 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~ 361 (433)
.|+++-.|-.. +.+..+.+.|++.+..+.+........ .. .+ . .......+++
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~-------~~-~~--------------~-~~~~~~~~d~- 85 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGD-------AA-RY--------------V-EEARKFGVAT- 85 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTH-------HH-HH--------------H-HHHHHHTCSE-
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcch-------HH-HH--------------H-HHHHhcCCCE-
Confidence 45555444322 456778888888888776654332110 00 00 0 1112233455
Q ss_pred eeecccchhhHHHHH--------HcCCcEEeccc
Q 013951 362 GFLTHCGWNSSLEGI--------SAGVQMLTWPL 387 (433)
Q Consensus 362 ~~ItHGG~gs~~eal--------~~GvP~v~~P~ 387 (433)
+|.-||=||+.|++ ..++|+.++|.
T Consensus 86 -vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 86 -VIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp -EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred -EEEEccchHHHHHHHHHhhcccCCCCeEEEecC
Confidence 99999999999974 36789999997
No 169
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=39.39 E-value=1.1e+02 Score=27.05 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=57.0
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc--chhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV--NAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCE 83 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 83 (433)
++++|++. |+.|.+- ..|+++|.++||+|+.++-.. ..+..+. .... ...++.++..++ .
T Consensus 9 ~~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-~~~l--~~~~v~~~~~Dl-------~---- 70 (346)
T 3i6i_A 9 PKGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPGPRSPSKAKI-FKAL--EDKGAIIVYGLI-------N---- 70 (346)
T ss_dssp --CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSSCCCHHHHHH-HHHH--HHTTCEEEECCT-------T----
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCCCCChhHHHH-HHHH--HhCCcEEEEeec-------C----
Confidence 33455544 6667554 568899999999999998654 2122211 1111 112466655321 0
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc------chHHHHHHcC-CCcEEE
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP------WTVDTAAKFN-VPRIIF 144 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~------~~~~~A~~~g-iP~v~~ 144 (433)
. .+.+.+++++ .++|+||.=.-.. ....+|++.| ++.+..
T Consensus 71 ------d-------------~~~l~~~~~~--~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 71 ------E-------------QEAMEKILKE--HEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp ------C-------------HHHHHHHHHH--TTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred ------C-------------HHHHHHHHhh--CCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 0 2356667777 6899998644321 3456677778 887663
No 170
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=39.38 E-value=57 Score=23.50 Aligned_cols=41 Identities=20% Similarity=0.459 Sum_probs=27.4
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
..+.+++ .+||++|.|.... .+..+++.+ ++|++.++....
T Consensus 39 ~~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (126)
T 1dbw_A 39 FLAFAPD--VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGD 86 (126)
T ss_dssp HHHHGGG--CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTC
T ss_pred HHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 3445566 7899999998654 455555443 588888766543
No 171
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.97 E-value=15 Score=32.39 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=25.5
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
|+-+.+.+||.|+=.+..| ..+|+.|+++||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 4444556789999665555 4678999999999998853
No 172
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=38.76 E-value=1.1e+02 Score=26.08 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++.++. -+ =.++|+.|.++|++|.++.-
T Consensus 4 ~k~~lVTGas~-GI--G~aia~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 4 DKVILITGASG-GI--GEGIARELGVAGAKILLGAR 36 (264)
T ss_dssp TCEEEESSTTS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCcc-HH--HHHHHHHHHHCCCEEEEEEC
Confidence 36788885553 33 36889999999999988763
No 173
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=38.48 E-value=1.3e+02 Score=26.43 Aligned_cols=107 Identities=8% Similarity=0.083 Sum_probs=62.0
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGC 82 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (433)
..++||+++.++. || -+.+|...-.+. +.+|..+.+.. ..+++..+. .++.+..++. ..
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~--~~~~~~A~~-----~gIp~~~~~~---------~~ 163 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNH--QDLRSMVEW-----HDIPYYHVPV---------DP 163 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESS--STTHHHHHT-----TTCCEEECCC---------CS
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECc--HHHHHHHHH-----cCCCEEEcCC---------Cc
Confidence 3467999888666 55 355666555443 56888776532 123333322 3677776531 10
Q ss_pred CCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 83 ENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
. .. ....+.+.+.+++ .+||+||.=.+. .-...+.+.+.-.++-+.++
T Consensus 164 ~------~r---------~~~~~~~~~~l~~--~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 164 K------DK---------EPAFAEVSRLVGH--HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp S------CC---------HHHHHHHHHHHHH--TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred C------CH---------HHHHHHHHHHHHH--hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 0 00 0123467788888 899999976654 35555666666667766443
No 174
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=38.36 E-value=62 Score=27.35 Aligned_cols=37 Identities=14% Similarity=0.099 Sum_probs=27.8
Q ss_pred cEEEEEcCCCCC-----------ChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPG-----------HLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~G-----------H~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+||+|+.....+ ...=+....+.|.++|++|+++++.
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 588888865221 3455777788899999999999976
No 175
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=38.29 E-value=45 Score=27.31 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=31.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+..++++..+..|+-.-+..+++.|+++|+.|..+-..
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~~ 68 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPELY 68 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEeccc
Confidence 34577777888888888999999999999988877653
No 176
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=38.08 E-value=30 Score=30.92 Aligned_cols=34 Identities=15% Similarity=0.047 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+||.|+=.+..| |-.+|+.|.++||+|+..=..
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcCC
Confidence 5689999888777 667999999999999998543
No 177
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=37.79 E-value=15 Score=32.61 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=24.2
Q ss_pred hcCCCceeeecccchhhHHHHHHc----CCcEEeccc
Q 013951 355 LSHPAVGGFLTHCGWNSSLEGISA----GVQMLTWPL 387 (433)
Q Consensus 355 L~~~~~~~~ItHGG~gs~~eal~~----GvP~v~~P~ 387 (433)
...+++ +|.-||-||+++++.. ++|++.++.
T Consensus 73 ~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 334566 9999999999998754 899999984
No 178
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=37.77 E-value=93 Score=27.29 Aligned_cols=81 Identities=10% Similarity=-0.038 Sum_probs=47.7
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCce
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVG 361 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~ 361 (433)
.+.++--|-.....+.+..+...|+..+..+.+........ . ..+.. .+....++
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~-------a-~~~~~----------------~~~~~~d~- 66 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGD-------A-TKYCQ----------------EFASKVDL- 66 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTH-------H-HHHHH----------------HHTTTCSE-
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcch-------H-HHHHH----------------HhhcCCCE-
Confidence 45566544433334556677778888777665554332110 0 00000 01123345
Q ss_pred eeecccchhhHHHHHH------cCCcEEecccc
Q 013951 362 GFLTHCGWNSSLEGIS------AGVQMLTWPLF 388 (433)
Q Consensus 362 ~~ItHGG~gs~~eal~------~GvP~v~~P~~ 388 (433)
+|.-||-||+.|++. .++|+.++|..
T Consensus 67 -vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 67 -IIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp -EEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred -EEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 999999999999764 57999999973
No 179
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=37.36 E-value=1.7e+02 Score=24.06 Aligned_cols=107 Identities=9% Similarity=0.027 Sum_probs=59.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
+||+++.++. |+ -+.+|.+...+. ..+|..+.+..-...+.+..+. .++.+..++ +....
T Consensus 3 ~riavl~Sg~-Gs--nl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~-----~gIp~~~~~--------~~~~~-- 64 (211)
T 3p9x_A 3 KRVAIFASGS-GT--NAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKV-----HEIPVCALD--------PKTYP-- 64 (211)
T ss_dssp CEEEEECCTT-CH--HHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHT-----TTCCEEECC--------GGGSS--
T ss_pred CEEEEEEeCC-ch--HHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHH-----cCCCEEEeC--------hhhcC--
Confidence 5898888775 42 356666665443 2578877664222223333322 256665442 11110
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
. -....+.+.+.+++ .+||++|+=.+. .-...+-+.+...++-+.++
T Consensus 65 ----~---------r~~~d~~~~~~l~~--~~~Dliv~agy~~Il~~~~l~~~~~~~iNiHpS 112 (211)
T 3p9x_A 65 ----S---------KEAYEIEVVQQLKE--KQIDFVVLAGYMRLVGPTLLGAYEGRIVNIHPS 112 (211)
T ss_dssp ----S---------HHHHHHHHHHHHHH--TTCCEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ----c---------hhhhHHHHHHHHHh--cCCCEEEEeCchhhcCHHHHhhccCCeEEECCc
Confidence 0 01124567788888 899999977654 34555666666667766443
No 180
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=37.08 E-value=33 Score=31.35 Aligned_cols=39 Identities=5% Similarity=-0.059 Sum_probs=29.4
Q ss_pred CCcEEEEEcCCCCCC----hHHHHHHHHHH-HHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGH----LIPMFDIARLL-AQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH----~~P~l~La~~L-~~rGH~Vt~~~~~ 44 (433)
+++||+++..+..+- +.....++++| .++||+|+.+...
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 467899998665443 33578899999 9999999999643
No 181
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=36.84 E-value=69 Score=23.24 Aligned_cols=40 Identities=18% Similarity=0.162 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHH-------cCCCcEEEecc
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHGF 147 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~-------~giP~v~~~~~ 147 (433)
...+.+++ .+||+||.|.... .+..+++. -++|++.++..
T Consensus 38 ~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~ 86 (133)
T 3nhm_A 38 SGLQQALA--HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGY 86 (133)
T ss_dssp HHHHHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESC
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCC
Confidence 34455666 7899999998654 44444432 16888887654
No 182
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=36.72 E-value=80 Score=22.12 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=25.6
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecc
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGF 147 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 147 (433)
..+.+++ .+||++|.|.... .+..+++.+ ++|.+.++..
T Consensus 37 a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 82 (116)
T 3a10_A 37 ALKKFFS--GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAY 82 (116)
T ss_dssp HHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECC
Confidence 3445566 7899999998654 455555433 5788877654
No 183
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=36.54 E-value=42 Score=29.52 Aligned_cols=33 Identities=15% Similarity=0.164 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+|++. |+.|.+- ..|+++|.++||+|+.++-..
T Consensus 13 ~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIF--GGTGYIG--NHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEE--CCCchHH--HHHHHHHHHCCCcEEEEECCC
Confidence 55443 6666664 578899999999999987543
No 184
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=36.26 E-value=1.6e+02 Score=24.90 Aligned_cols=56 Identities=18% Similarity=0.284 Sum_probs=33.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEE
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIE 68 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (433)
.|+++++..+.| + =.++|++|+++|++|.++.-. .+..++..+.....+..+.++.
T Consensus 11 ~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~~~~ 66 (264)
T 3ucx_A 11 DKVVVISGVGPA-L--GTTLARRCAEQGADLVLAART--VERLEDVAKQVTDTGRRALSVG 66 (264)
T ss_dssp TCEEEEESCCTT-H--HHHHHHHHHHTTCEEEEEESC--HHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEEECCCcH-H--HHHHHHHHHHCcCEEEEEeCC--HHHHHHHHHHHHhcCCcEEEEE
Confidence 467778755543 3 368899999999999887643 3334443333322333454443
No 185
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=36.15 E-value=51 Score=24.67 Aligned_cols=36 Identities=8% Similarity=-0.009 Sum_probs=26.6
Q ss_pred EEEcCCCCC--ChHHHHHHHHHHHHCCCEE-EEEECCcc
Q 013951 11 LLLPYLAPG--HLIPMFDIARLLAQHGAIV-TIVTTPVN 46 (433)
Q Consensus 11 l~~~~~~~G--H~~P~l~La~~L~~rGH~V-t~~~~~~~ 46 (433)
+++..+.+| .....+.+|..+.+.||+| .++.....
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dG 43 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDG 43 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence 344444444 4567899999999999999 88887643
No 186
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=36.13 E-value=34 Score=25.30 Aligned_cols=38 Identities=11% Similarity=-0.087 Sum_probs=26.6
Q ss_pred cEEEEEcCCCCCCh--HHHHHHHHHHHHCC--CEEEEEECCc
Q 013951 8 VHFLLLPYLAPGHL--IPMFDIARLLAQHG--AIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~~~~~GH~--~P~l~La~~L~~rG--H~Vt~~~~~~ 45 (433)
+|++|+-+...-.. +-.+..|....++| |+|.++....
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 46666665532222 34678899999999 8999998773
No 187
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=35.95 E-value=38 Score=30.21 Aligned_cols=71 Identities=13% Similarity=0.079 Sum_probs=40.1
Q ss_pred HhhcCCcEEEeCcCCCCCCCCccccccCCCCCCCchhhhhhhccCCCCeEEEEeeCCCc---CCChhhHHHHHHHHHhCC
Q 013951 233 KKAKQGKVWCIGPASLCNKEPIDKAERGKTASIDVPECLTWLDSQQPSSVVYVCLGSIC---NLPSSQLIELGLGLEASN 309 (433)
Q Consensus 233 ~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~---~~~~~~~~~~~~al~~~~ 309 (433)
.+..|.++..+|-+.+..+. ...+++...++..+-+++ -+|+.. ..+...+..+.+.+++.+
T Consensus 104 ~~~~p~r~~~~~~l~~~~~~------------~a~~el~~~~~~~g~~Gv---~l~~~~~~~~l~d~~~~~~~~~~~e~~ 168 (336)
T 2wm1_A 104 VVSYPRRFVGLGTLPMQAPE------------LAVKEMERCVKELGFPGV---QIGTHVNEWDLNAQELFPVYAAAERLK 168 (336)
T ss_dssp HHHSTTTEEEEECCCTTSHH------------HHHHHHHHHHHTSCCSEE---EEESEETTEETTCGGGHHHHHHHHHHT
T ss_pred HHhccCceeEEEeCCCcCHH------------HHHHHHHHHHHccCCeEE---EECCcCCCCCCCCccHHHHHHHHHHcC
Confidence 34455567777655432110 013566666644332333 333332 245667889999999999
Q ss_pred CCEEEEEeC
Q 013951 310 KPFVWVIRG 318 (433)
Q Consensus 310 ~~~i~~~~~ 318 (433)
..+++-.+.
T Consensus 169 lpv~iH~~~ 177 (336)
T 2wm1_A 169 CSLFVHPWD 177 (336)
T ss_dssp CEEEEECCS
T ss_pred CEEEECCCC
Confidence 887766543
No 188
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=35.89 E-value=1.4e+02 Score=27.71 Aligned_cols=33 Identities=15% Similarity=0.091 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+||+++- .| .-...+++++++.|++|.++.+..
T Consensus 2 k~ilI~g---~g--~~~~~i~~a~~~~G~~vv~v~~~~ 34 (451)
T 2vpq_A 2 KKVLIAN---RG--EIAVRIIRACRDLGIQTVAIYSEG 34 (451)
T ss_dssp CEEEECC---CH--HHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred ceEEEeC---CC--HHHHHHHHHHHHcCCEEEEEeccc
Confidence 3677654 23 356789999999999999987543
No 189
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=35.84 E-value=52 Score=27.46 Aligned_cols=40 Identities=28% Similarity=0.181 Sum_probs=25.7
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|...++.++ ++++ ++.|.+- .++|++|.++|++|.++.-.
T Consensus 1 m~~~~~~~~-vlVT-GasggiG--~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 1 MKLNFSGLR-ALVT-GAGKGIG--RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp --CCCTTCE-EEEE-STTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CccCCCCCE-EEEe-CCCchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 444444444 4555 4555443 57899999999999888643
No 190
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=35.81 E-value=2.6e+02 Score=25.65 Aligned_cols=35 Identities=29% Similarity=0.153 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
.+||+++-. | .-...+++++.+.||+|..+.....
T Consensus 19 ~~~ili~g~---g--~~g~~~~~a~~~~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 19 AQKILLLGS---G--ELGKEIAIEAQRLGVEVVAVDRYAN 53 (433)
T ss_dssp CCEEEEESC---S--HHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCEEEEECC---C--HHHHHHHHHHHHCCCEEEEEECCCC
Confidence 458988843 3 2456788999999999998876543
No 191
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=35.67 E-value=57 Score=27.59 Aligned_cols=40 Identities=20% Similarity=0.133 Sum_probs=27.0
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|...++. |.++++ ++.|-+- .++|+.|.++|++|+++.-.
T Consensus 1 m~~~~~~-k~vlIT-GasggiG--~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 1 MQNRLRS-ALALVT-GAGSGIG--RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CCCCCTT-CEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CccccCC-CEEEEE-CCCChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 5555544 455666 4444343 67899999999999988643
No 192
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=35.63 E-value=1.2e+02 Score=25.02 Aligned_cols=45 Identities=7% Similarity=-0.131 Sum_probs=29.0
Q ss_pred eEEeCcccHhh-hhcCCCceeeecccchhhHHHHHH---------cCCcEEeccc
Q 013951 343 LLIRGWAPQVL-ILSHPAVGGFLTHCGWNSSLEGIS---------AGVQMLTWPL 387 (433)
Q Consensus 343 v~~~~~~pq~~-lL~~~~~~~~ItHGG~gs~~eal~---------~GvP~v~~P~ 387 (433)
+.+....++.. ++..-+-..++--||.||+-|... +++|++++-.
T Consensus 93 ~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 93 VRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 34455556533 444333345777899999987652 5899998864
No 193
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=35.58 E-value=63 Score=27.25 Aligned_cols=42 Identities=12% Similarity=0.002 Sum_probs=29.7
Q ss_pred HHHHHHHHHhCCCCCcEEEECCCCc-------chHHHHHHcCCCcEEEe
Q 013951 104 QQPFENLFKEKTLKPCCIISDMCFP-------WTVDTAAKFNVPRIIFH 145 (433)
Q Consensus 104 ~~~l~~~l~~~~~~pD~vI~D~~~~-------~~~~~A~~~giP~v~~~ 145 (433)
.+.+.++++++..+||++++|..-. -+..+.-.+++|+|-+.
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 4566677776667899999998765 22344456789988763
No 194
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=35.50 E-value=1.5e+02 Score=25.66 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++..+ |-+ =.++|++|.++|++|.++.-.
T Consensus 31 gk~vlVTGas-~gI--G~~la~~l~~~G~~V~~~~r~ 64 (301)
T 3tjr_A 31 GRAAVVTGGA-SGI--GLATATEFARRGARLVLSDVD 64 (301)
T ss_dssp TCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEECC
Confidence 3577777444 434 368899999999999887643
No 195
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=35.45 E-value=1.8e+02 Score=24.22 Aligned_cols=33 Identities=27% Similarity=0.245 Sum_probs=23.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|.++++..+ |-+ =.++|+.|.++|++|.++.-.
T Consensus 8 k~~lVTGas-~gI--G~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 8 KVALITGAS-SGI--GEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp CEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-CHH--HHHHHHHHHHCCCEEEEEECC
Confidence 566777444 434 357899999999999888643
No 196
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=35.30 E-value=66 Score=22.88 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=27.6
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc----CCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF----NVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~----giP~v~~~~~~~ 149 (433)
...+.+++ .+||++|.|.... .+..+++.+ .+|.+.++....
T Consensus 37 ~~~~~~~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 84 (122)
T 1zgz_A 37 GLREIMQN--QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSD 84 (122)
T ss_dssp HHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCC
Confidence 34445566 7899999998654 455555544 578777765543
No 197
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=35.08 E-value=26 Score=28.15 Aligned_cols=45 Identities=11% Similarity=0.007 Sum_probs=29.9
Q ss_pred eEEeCcccHhh-hhc-CCCceeeecccchhhHHH---HHHcCCcEEecccc
Q 013951 343 LLIRGWAPQVL-ILS-HPAVGGFLTHCGWNSSLE---GISAGVQMLTWPLF 388 (433)
Q Consensus 343 v~~~~~~pq~~-lL~-~~~~~~~ItHGG~gs~~e---al~~GvP~v~~P~~ 388 (433)
.++.+..++.. ++. .++ ..++-=||.||+.| ++.+++|++++|.+
T Consensus 91 ~i~~~~~~~Rk~~m~~~sd-a~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSN-VLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EEECCCCSSSCCCCGGGCS-EEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred eEEcCCHHHHHHHHHHhCC-EEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 34445555433 443 344 34666789998765 67899999999984
No 198
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=35.07 E-value=44 Score=26.36 Aligned_cols=38 Identities=16% Similarity=0.287 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCC---CChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAP---GHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~---GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..+|+++|.=+. ---.+...|++.|.++|.+|.|..++
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 346777763221 12357889999999999999999998
No 199
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=34.97 E-value=1.8e+02 Score=24.53 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=25.6
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|....+ .|+++++..+ |-+ =.++|+.|.++|++|.++.-.
T Consensus 1 m~~~l~-~k~vlVTGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 1 MSKKFN-GKVCLVTGAG-GNI--GLATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp --CTTT-TCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCcccC-CCEEEEeCCC-cHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 444333 3566677444 434 357899999999999988643
No 200
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=34.91 E-value=19 Score=32.36 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+||+|+=.|..| ..+|..|.++||+|+++...
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 4689999777666 45688999999999999853
No 201
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=34.77 E-value=2e+02 Score=23.92 Aligned_cols=35 Identities=29% Similarity=0.281 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..|+++++..+.| + =.++|++|.++|++|.++...
T Consensus 6 ~~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 6 KGKVALVTGASRG-I--GRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TTCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCCh-H--HHHHHHHHHHCCCeEEEEeCC
Confidence 4467888866544 3 368899999999999887544
No 202
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=34.69 E-value=41 Score=29.15 Aligned_cols=42 Identities=12% Similarity=0.238 Sum_probs=28.7
Q ss_pred HHhHHHHHHHHHhCCCCCcEEEECCCCc----------chHHHHHHcCCCcEEE
Q 013951 101 HMLQQPFENLFKEKTLKPCCIISDMCFP----------WTVDTAAKFNVPRIIF 144 (433)
Q Consensus 101 ~~~~~~l~~~l~~~~~~pD~vI~D~~~~----------~~~~~A~~~giP~v~~ 144 (433)
..+...+.+++++ .+||+||+-.-.. .+..+++..|+|++.+
T Consensus 134 ~~l~~~l~~~ir~--~~PdvV~t~~~~d~HpDH~~~~~a~~~A~~~~~~~~~~~ 185 (273)
T 3dff_A 134 GEVADDIRSIIDE--FDPTLVVTCAAIGEHPDHEATRDAALFATHEKNVPVRLW 185 (273)
T ss_dssp HHHHHHHHHHHHH--HCCSEEEEECCTTCCHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHH--cCCCEEEECCCCCCChHHHHHHHHHHHHHHHcCCCEEEe
Confidence 4566788889999 8999999853221 2344556778886654
No 203
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=34.59 E-value=64 Score=23.75 Aligned_cols=41 Identities=7% Similarity=0.028 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHH-------cCCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~-------~giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+++. -++|++.++...
T Consensus 41 ~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 41 QALEQVAR--RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp HHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred HHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 34455666 7899999998654 45555543 257888776544
No 204
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=34.49 E-value=52 Score=25.02 Aligned_cols=95 Identities=13% Similarity=0.042 Sum_probs=59.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
++|++.. ...+=.-++.+|+.|.+. ||++ +.+......+++. . |+.+..+. ..+.+
T Consensus 4 ~~ialsv--~D~dK~~~v~~a~~~~~ll~Gf~l--~AT~gTa~~L~e~---~-----Gl~v~~v~------k~~~e---- 61 (134)
T 2xw6_A 4 RALALIA--HDAKKEEMVAFCQRHREVLARFPL--VATGTTGRRIEEA---T-----GLTVEKLL------SGPLG---- 61 (134)
T ss_dssp CEEEEEE--CGGGHHHHHHHHHHTHHHHTTSCE--EECHHHHHHHHHH---H-----CCCCEECS------CGGGT----
T ss_pred cEEEEEE--ecccHHHHHHHHHHHHHHhCCCEE--EEccHHHHHHHHh---h-----CceEEEEE------ecCCC----
Confidence 4566654 234456689999999998 9954 4666555555442 1 45444431 11100
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCC--C--------cchHHHHHHcCCCcEE
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMC--F--------PWTVDTAAKFNVPRII 143 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~--~--------~~~~~~A~~~giP~v~ 143 (433)
-.+.+.+.+++ .+.|+||.-.- . ..-..+|-..+||++.
T Consensus 62 -----------------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 110 (134)
T 2xw6_A 62 -----------------GDQQMGARVAE--GRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLAT 110 (134)
T ss_dssp -----------------HHHHHHHHHHT--TCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEEC
T ss_pred -----------------CcchHHHHHHC--CCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEc
Confidence 13468888999 99999996332 1 1357788899999875
No 205
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=34.47 E-value=45 Score=26.39 Aligned_cols=37 Identities=19% Similarity=0.386 Sum_probs=28.2
Q ss_pred cEEEEEcCCCC--C-ChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAP--G-HLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~--G-H~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+|+++|.=+. . --.+...|++.|.++|.+|.|..++
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 46777773321 1 2347889999999999999999998
No 206
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=34.39 E-value=91 Score=26.49 Aligned_cols=45 Identities=7% Similarity=-0.039 Sum_probs=29.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC-cchhhhHHHHH
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP-VNAARFKTVIA 55 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~-~~~~~~~~~~~ 55 (433)
.|+++++.++.| + =.++|+.|+++|++|.++.-. ...+..++...
T Consensus 11 ~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~ 56 (262)
T 3ksu_A 11 NKVIVIAGGIKN-L--GALTAKTFALESVNLVLHYHQAKDSDTANKLKD 56 (262)
T ss_dssp TCEEEEETCSSH-H--HHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHH
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEecCccCHHHHHHHHH
Confidence 467888866554 3 368899999999999987643 33334444433
No 207
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=34.31 E-value=57 Score=28.77 Aligned_cols=38 Identities=11% Similarity=-0.139 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCCCC----hHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGH----LIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH----~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++||+++..+..+- +.....++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57899998654332 346789999999999999999854
No 208
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=34.26 E-value=50 Score=23.88 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.+||+++|..+.|+-.=.-.+-+.+.++|.++.+-+.
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 3689999999999986667777888888987665443
No 209
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=34.08 E-value=57 Score=25.61 Aligned_cols=46 Identities=9% Similarity=0.206 Sum_probs=33.8
Q ss_pred HHhHHHHHHHHHhCCCCCcEEEECCCCcc---------------hHHHHHHcCCCcEEEecch
Q 013951 101 HMLQQPFENLFKEKTLKPCCIISDMCFPW---------------TVDTAAKFNVPRIIFHGFS 148 (433)
Q Consensus 101 ~~~~~~l~~~l~~~~~~pD~vI~D~~~~~---------------~~~~A~~~giP~v~~~~~~ 148 (433)
......+.+++++ .+||.+..+..+.. ...++...|||+.-+.+..
T Consensus 45 ~~i~~~l~~~i~~--~~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp~~ 105 (158)
T 1hjr_A 45 KLIYAGVTEIITQ--FQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQ 105 (158)
T ss_dssp HHHHHHHHHHHHH--HCCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEHHH
T ss_pred HHHHHHHHHHHHH--cCCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHH
Confidence 4556778888998 89999998876641 1456677899988876543
No 210
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=33.92 E-value=88 Score=29.72 Aligned_cols=106 Identities=13% Similarity=0.086 Sum_probs=53.8
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCC-
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCE- 83 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 83 (433)
+.++|-+|++. ++=.-++.+|+.|.+.|.+|. +|......+++. |+.+..+.- ..+.|+.+.
T Consensus 7 ~~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~---------GI~v~~V~~---vTgfPEil~G 69 (523)
T 3zzm_A 7 RRPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT---------GIPVTPVEQ---LTGFPEVLDG 69 (523)
T ss_dssp CCCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT---------TCCCEEHHH---HHSCCCCTTT
T ss_pred cccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc---------CCceeeccc---cCCCchhhCC
Confidence 44445455554 355568899999999998875 555444433332 566655531 024455443
Q ss_pred CCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc
Q 013951 84 NCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP 128 (433)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~ 128 (433)
..+++.+.-...++.. +...+...++-+.-...+|+||++.+-+
T Consensus 70 RVKTLHP~ihgGiLa~-r~~~~h~~~l~~~~i~~iDlVvvNLYPF 113 (523)
T 3zzm_A 70 RVKTLHPRVHAGLLAD-LRKSEHAAALEQLGIEAFELVVVNLYPF 113 (523)
T ss_dssp TSSSCSHHHHHHHHCC-TTSHHHHHHHHHHTCCCCSEEEEECCCH
T ss_pred ccccCCchhhhhhccC-CCCHHHHHHHHHCCCCceeEEEEeCCCh
Confidence 2222222111111111 1222333333222246899999996543
No 211
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=33.91 E-value=1.3e+02 Score=25.47 Aligned_cols=34 Identities=18% Similarity=0.004 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++.++ |-+ =.++|+.|+++|++|.+....
T Consensus 4 ~k~vlVTGas-~gI--G~aia~~l~~~G~~vv~~~~r 37 (258)
T 3oid_A 4 NKCALVTGSS-RGV--GKAAAIRLAENGYNIVINYAR 37 (258)
T ss_dssp CCEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEecCC-chH--HHHHHHHHHHCCCEEEEEcCC
Confidence 4677887544 434 367899999999999986433
No 212
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=33.84 E-value=61 Score=22.99 Aligned_cols=40 Identities=25% Similarity=0.402 Sum_probs=26.2
Q ss_pred HHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 108 ENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 108 ~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
.+.+++ .+||+||.|.... .+..+++++ ++|.+.++....
T Consensus 40 ~~~~~~--~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 86 (120)
T 1tmy_A 40 VEKYKE--LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 86 (120)
T ss_dssp HHHHHH--HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred HHHHHh--cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCC
Confidence 344455 5899999998654 455555543 588888766543
No 213
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=33.79 E-value=66 Score=29.10 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=21.5
Q ss_pred CCCceeeecccchhhH---HHHHHcCCcEEec
Q 013951 357 HPAVGGFLTHCGWNSS---LEGISAGVQMLTW 385 (433)
Q Consensus 357 ~~~~~~~ItHGG~gs~---~eal~~GvP~v~~ 385 (433)
+|++ +|++||.-+. .-|-..|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 6777 9999997764 4577889999963
No 214
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=33.43 E-value=3e+02 Score=25.60 Aligned_cols=43 Identities=16% Similarity=0.175 Sum_probs=34.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEECCcchhhh
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQ-HGAIVTIVTTPVNAARF 50 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~-rGH~Vt~~~~~~~~~~~ 50 (433)
--+++.-.|+.|--.-++.+|..++. .|..|.+++.+.....+
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~~~l 247 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQL 247 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHH
Confidence 35777778899999999999999986 69999999988655433
No 215
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=33.31 E-value=22 Score=31.48 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=27.5
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
|..+.+.+||.|+=.+..| ..+|+.|.++||+|+++.
T Consensus 3 m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CCCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CCcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEe
Confidence 3444456789998665555 367899999999999874
No 216
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=33.25 E-value=72 Score=22.96 Aligned_cols=30 Identities=10% Similarity=0.090 Sum_probs=24.1
Q ss_pred CCChHHHHHHHHHHHHC-CC-EEEEEECCcch
Q 013951 18 PGHLIPMFDIARLLAQH-GA-IVTIVTTPVNA 47 (433)
Q Consensus 18 ~GH~~P~l~La~~L~~r-GH-~Vt~~~~~~~~ 47 (433)
.......+.+|..+.+. || +|+++......
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 45567789999999999 99 99999877443
No 217
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=33.04 E-value=62 Score=26.31 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+..++++..+..|+..-+..+++.|.++|+.|..+-..
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 64 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDLY 64 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEecccc
Confidence 34566777788888888999999999999988776543
No 218
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=32.90 E-value=1.5e+02 Score=23.27 Aligned_cols=86 Identities=7% Similarity=-0.065 Sum_probs=46.2
Q ss_pred CeEEEEeeCCCcCCC-hhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCC
Q 013951 280 SSVVYVCLGSICNLP-SSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHP 358 (433)
Q Consensus 280 ~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~ 358 (433)
+..+|.+..=..... .+..+++.+.+++.+..+++ +...... ....+ |--....+..|
T Consensus 10 ~~~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~v~~---P~~~~~~-----~~~~i-------------~~~d~~~i~~a 68 (161)
T 2f62_A 10 RKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLI---PTDNEAT-----EALDI-------------RQKNIQMIKDC 68 (161)
T ss_dssp CEEEEESGGGGSTTTTHHHHHHHHHHHHTTTCEEEC---TTTTCCS-----SHHHH-------------HHHHHHHHHHC
T ss_pred hceEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEC---CCccCcc-----hHHHH-------------HHHHHHHHHhC
Confidence 346776544333345 56677788889988865433 2211100 00000 00112344455
Q ss_pred Cceeee-c-----ccchhhHHH---HHHcCCcEEecc
Q 013951 359 AVGGFL-T-----HCGWNSSLE---GISAGVQMLTWP 386 (433)
Q Consensus 359 ~~~~~I-t-----HGG~gs~~e---al~~GvP~v~~P 386 (433)
++-+.+ + .--.||..| |...|+|++++-
T Consensus 69 D~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 69 DAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp SEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 552233 2 234889999 688999999974
No 219
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=32.79 E-value=24 Score=26.68 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+||+++=. |.+ -..+|+.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 347777643 543 467899999999999998754
No 220
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=32.73 E-value=1.5e+02 Score=24.67 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=23.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|.++++. +.|-+ =.++|++|.++|++|.++.-.
T Consensus 14 k~vlItG-asggi--G~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTG-GAQNI--GLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEET-TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeC-CCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5566664 44434 367999999999999988744
No 221
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=32.65 E-value=1.1e+02 Score=25.52 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=24.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|.++++ ++.|.+- .+++++|.++||+|.++.-.
T Consensus 8 k~vlVT-GasggiG--~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 8 KRVLIT-GSSQGIG--LATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp CEEEET-TCSSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEe-CCCChHH--HHHHHHHHHCCCEEEEECCC
Confidence 455666 5555553 57899999999999988643
No 222
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=32.59 E-value=1.4e+02 Score=25.18 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++.++ |-+ =.++|++|.++|++|.++.-.
T Consensus 29 ~k~vlITGas-~gI--G~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 29 GQVAVVTGAS-RGI--GAAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp TCEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEECC
Confidence 3677787554 433 367899999999999887643
No 223
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=32.52 E-value=1.9e+02 Score=27.36 Aligned_cols=42 Identities=7% Similarity=-0.134 Sum_probs=34.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEECCcchhhh
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQH-GAIVTIVTTPVNAARF 50 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~r-GH~Vt~~~~~~~~~~~ 50 (433)
=+++.-.|+.|-..-++.+|..++.+ |..|.+++.+...+.+
T Consensus 244 l~li~G~pG~GKT~lal~~a~~~a~~~g~~vl~~s~E~s~~~l 286 (503)
T 1q57_A 244 VIMVTSGSGMVMSTFVRQQALQWGTAMGKKVGLAMLEESVEET 286 (503)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHTTTSCCCEEEEESSSCHHHH
T ss_pred EEEEeecCCCCchHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence 35666778899999999999999987 9999999998765443
No 224
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=32.48 E-value=61 Score=24.45 Aligned_cols=42 Identities=19% Similarity=0.155 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
...+.+++ .+||+||.|.... .+..+++.+ ++|+|.++....
T Consensus 49 ~a~~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 97 (153)
T 3hv2_A 49 QALQLLAS--REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPD 97 (153)
T ss_dssp HHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCC
T ss_pred HHHHHHHc--CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCC
Confidence 44455667 7999999998654 455555443 588888765543
No 225
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=32.37 E-value=64 Score=23.59 Aligned_cols=42 Identities=26% Similarity=0.396 Sum_probs=27.0
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
...+.+++ .+||+||.|.... .+..+++.+ ++|++.++....
T Consensus 40 ~al~~~~~--~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 88 (133)
T 3b2n_A 40 DAMKLIEE--YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKR 88 (133)
T ss_dssp HHHHHHHH--HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHHhh--cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCC
Confidence 33444555 6899999998654 455555443 588888765543
No 226
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=32.29 E-value=58 Score=29.17 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=51.2
Q ss_pred CChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhH
Q 013951 293 LPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSS 372 (433)
Q Consensus 293 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~ 372 (433)
.+.+..+.+.+++.+...+.||...++.... ++.++++...+-++|.. ||-+.-...+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~~--------------------rlL~~lD~~~i~~~PK~--~~GySDiTaL 119 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGYNSN--------------------GLLKYLDYDLIRENPKF--FCGYSDITAL 119 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCGG--------------------GGGGGCCHHHHHTSCCE--EEECGGGHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccHH--------------------HHHhhcChhHHHhCCeE--EEEecchHHH
Confidence 4456677899999999999999887764321 23355555555566766 8877777777
Q ss_pred HHHHH--cCCcEEecccc
Q 013951 373 LEGIS--AGVQMLTWPLF 388 (433)
Q Consensus 373 ~eal~--~GvP~v~~P~~ 388 (433)
+-+++ .|+..+-=|..
T Consensus 120 ~~al~~~~G~~t~hGp~~ 137 (331)
T 4e5s_A 120 NNAIYTKTGLVTYSGPHF 137 (331)
T ss_dssp HHHHHHHHCBCEEECCCG
T ss_pred HHHHHHhhCCcEEEccch
Confidence 77776 47777666653
No 227
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=32.19 E-value=68 Score=24.06 Aligned_cols=42 Identities=12% Similarity=0.103 Sum_probs=28.1
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
...+.+++ .+||+||.|.... .+..+++.+ ++|+|.++....
T Consensus 57 ~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 105 (150)
T 4e7p_A 57 EAIQLLEK--ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKR 105 (150)
T ss_dssp HHHHHHTT--SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCC
T ss_pred HHHHHhhc--cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 44556666 7899999998654 455555533 588888766543
No 228
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=31.94 E-value=26 Score=29.53 Aligned_cols=38 Identities=8% Similarity=0.019 Sum_probs=32.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+||+|..-|+-|--.=...||..|+++|++|.++=...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36888777777888889999999999999999996554
No 229
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=31.88 E-value=49 Score=27.58 Aligned_cols=44 Identities=5% Similarity=-0.099 Sum_probs=29.4
Q ss_pred eEEeCcccHhh-hh-cCCCceeeecccchhhHHHHH---------HcCCcEEeccc
Q 013951 343 LLIRGWAPQVL-IL-SHPAVGGFLTHCGWNSSLEGI---------SAGVQMLTWPL 387 (433)
Q Consensus 343 v~~~~~~pq~~-lL-~~~~~~~~ItHGG~gs~~eal---------~~GvP~v~~P~ 387 (433)
+.+....+... ++ .+++ ..++--||.||+-|.. .+++|++++-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 45555555433 33 3444 3577889999988765 48999999963
No 230
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=31.88 E-value=2.4e+02 Score=24.00 Aligned_cols=33 Identities=24% Similarity=0.058 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++.++. -+ =.++|+.|+++|++|.++.-
T Consensus 33 gk~~lVTGas~-GI--G~aia~~la~~G~~V~~~~r 65 (275)
T 4imr_A 33 GRTALVTGSSR-GI--GAAIAEGLAGAGAHVILHGV 65 (275)
T ss_dssp TCEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEcC
Confidence 46788885554 33 36889999999999988864
No 231
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=31.85 E-value=84 Score=22.31 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=26.7
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc----CCCcEEEecchH
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF----NVPRIIFHGFSC 149 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~----giP~v~~~~~~~ 149 (433)
..+.+++ .+||++|.|.... .+..+++.+ ++|.+.++....
T Consensus 39 a~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 85 (123)
T 1xhf_A 39 MHQILSE--YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDN 85 (123)
T ss_dssp HHHHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred HHHHHhc--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCC
Confidence 3445566 7899999998654 455555443 688887765543
No 232
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=31.76 E-value=37 Score=25.29 Aligned_cols=33 Identities=12% Similarity=0.297 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.++|+++ | .|.+- ..+|+.|.++||+|+++...
T Consensus 4 ~m~i~Ii--G-~G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIA--G-IGRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEE--C-CSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEE--C-CCHHH--HHHHHHHHhCCCeEEEEECC
Confidence 3578877 3 36664 46789999999999998753
No 233
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=31.71 E-value=69 Score=27.20 Aligned_cols=40 Identities=15% Similarity=0.105 Sum_probs=25.9
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|....+. |.++++ ++.|-+ =.++|+.|.++||+|.++.-.
T Consensus 1 M~~~l~~-k~vlVT-Gas~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 1 MSGRLTG-KVALVS-GGARGM--GASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp -CCTTTT-CEEEEE-TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCCCC-CEEEEe-CCCCHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 5444433 456666 444444 357899999999999987643
No 234
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=31.66 E-value=53 Score=29.11 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
+.+||.|+=.|..| ..+|+.|.++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 34689999777776 5688999999999998753
No 235
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=31.59 E-value=1.1e+02 Score=21.61 Aligned_cols=42 Identities=14% Similarity=0.273 Sum_probs=27.2
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
...+.+++ .+||++|.|.... .+..+++.+ .+|++.++....
T Consensus 35 ~a~~~~~~--~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 83 (121)
T 2pl1_A 35 EADYYLNE--HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARES 83 (121)
T ss_dssp HHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCC
T ss_pred HHHHHHhc--cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCC
Confidence 33445566 7899999998654 444444432 588888766543
No 236
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=31.54 E-value=1.1e+02 Score=24.32 Aligned_cols=39 Identities=8% Similarity=0.066 Sum_probs=30.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++++||+|+.++... ..-+....+.|.+.|++|++++..
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 456799999876554 344677788899999999999976
No 237
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=31.52 E-value=52 Score=26.58 Aligned_cols=37 Identities=16% Similarity=0.296 Sum_probs=28.0
Q ss_pred cEEEEEcCCCC---CChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAP---GHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~---GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+|+++|.-+. ---.+...|++.|.++|.+|.|..++
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 46777773211 12346889999999999999999998
No 238
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=31.42 E-value=1.6e+02 Score=24.75 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQ-HGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~-rGH~Vt~~~~~ 44 (433)
.|.++++ |+.|-+- .++|+.|.+ +|++|.++.-.
T Consensus 4 ~k~vlIT-GasggIG--~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVT-GGNKGIG--LAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEES-SCSSHHH--HHHHHHHHHHSSSEEEEEESS
T ss_pred CCEEEEe-CCCcHHH--HHHHHHHHHhcCCeEEEEeCC
Confidence 3566677 4445443 578999999 99999988743
No 239
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=31.24 E-value=79 Score=22.25 Aligned_cols=39 Identities=23% Similarity=0.373 Sum_probs=25.7
Q ss_pred HHHHhCCCCCcEEEECCCCc--chHHHHHH----cCCCcEEEecchH
Q 013951 109 NLFKEKTLKPCCIISDMCFP--WTVDTAAK----FNVPRIIFHGFSC 149 (433)
Q Consensus 109 ~~l~~~~~~pD~vI~D~~~~--~~~~~A~~----~giP~v~~~~~~~ 149 (433)
+.+++ .+||++|.|.... .+..+++. -.+|.+.++....
T Consensus 39 ~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~ 83 (120)
T 2a9o_A 39 EQFEA--EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 83 (120)
T ss_dssp HHHHH--HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCS
T ss_pred HHHHh--CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCc
Confidence 44455 6899999997654 45545443 3688888766543
No 240
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=31.08 E-value=88 Score=23.12 Aligned_cols=41 Identities=17% Similarity=0.134 Sum_probs=27.0
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHH-------cCCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~-------~giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+.+. -++|+|.++...
T Consensus 42 ~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (144)
T 3kht_A 42 KALYQVQQ--AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNV 91 (144)
T ss_dssp HHHHHHTT--CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTC
T ss_pred HHHHHhhc--CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCC
Confidence 44455666 7999999998654 34444443 258888876543
No 241
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=31.05 E-value=95 Score=23.67 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=26.6
Q ss_pred EEEEcCCCCCChHH--HHHHHHHHHHCCCEE-EEEECCcc
Q 013951 10 FLLLPYLAPGHLIP--MFDIARLLAQHGAIV-TIVTTPVN 46 (433)
Q Consensus 10 il~~~~~~~GH~~P--~l~La~~L~~rGH~V-t~~~~~~~ 46 (433)
++++..+-+|+-.. .+.+|+.+.+.||+| .++-....
T Consensus 16 ~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DG 55 (140)
T 2d1p_A 16 AIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREG 55 (140)
T ss_dssp EEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechH
Confidence 44555556665544 678899999999999 88876633
No 242
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=30.98 E-value=55 Score=28.68 Aligned_cols=40 Identities=10% Similarity=0.010 Sum_probs=32.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+++.|+|+.-|+-|--.-...||..|+++|++|.++=...
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3456777777788888999999999999999999996553
No 243
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=30.89 E-value=54 Score=26.58 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=28.0
Q ss_pred cEEEEEcCCCC---CChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAP---GHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~---GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+|+++|.-+. ---.+...|++.|.++|.+|.|..++
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 46777773211 12356789999999999999999998
No 244
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=30.88 E-value=79 Score=26.28 Aligned_cols=37 Identities=8% Similarity=-0.060 Sum_probs=27.9
Q ss_pred cEEEEEcCCCCCC--hHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGH--LIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH--~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..++++..+..|+ ..-+..+++.|.++|+.|..+-.+
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 4566666677766 566889999999999988877554
No 245
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=30.68 E-value=46 Score=30.33 Aligned_cols=36 Identities=17% Similarity=0.208 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCC-CChHHHHHHHHHHHHCCCEEEEEE
Q 013951 7 QVHFLLLPYLAP-GHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 7 ~~~il~~~~~~~-GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
.++|++++=-+. .-+.=++.|++.|.++|++|++.+
T Consensus 212 ~k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~v 248 (367)
T 1xfi_A 212 WKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAA 248 (367)
T ss_dssp CCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEE
Confidence 468999986665 445445899999999999999886
No 246
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=30.62 E-value=30 Score=31.08 Aligned_cols=39 Identities=8% Similarity=-0.026 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCCCChH----HHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLI----PMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~----P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+++||+++..+..+-.. ....++++|.+.||+|..+...
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 46789988854333222 4667889999999999998643
No 247
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=30.59 E-value=62 Score=23.16 Aligned_cols=38 Identities=18% Similarity=0.428 Sum_probs=25.1
Q ss_pred HHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 109 NLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 109 ~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
+.+++ .+||++|.|.... .+..+++.+ .+|++.++...
T Consensus 41 ~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (124)
T 1srr_A 41 DIVTK--ERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 85 (124)
T ss_dssp HHHHH--HCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHhc--cCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccC
Confidence 44455 6899999997654 455555443 58888876654
No 248
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=30.44 E-value=27 Score=33.28 Aligned_cols=75 Identities=17% Similarity=0.037 Sum_probs=49.2
Q ss_pred eE-EeCcccHhh---hhcCCCceeeec---ccchh-hHHHHHHcCC-----cEEecccccccchhHHHhhhhccceEEee
Q 013951 343 LL-IRGWAPQVL---ILSHPAVGGFLT---HCGWN-SSLEGISAGV-----QMLTWPLFADQFCNEKLIVNVLRIGVSVG 409 (433)
Q Consensus 343 v~-~~~~~pq~~---lL~~~~~~~~It---HGG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~e~~G~G~~l~ 409 (433)
+. +.+.+++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--..+ .+. ...-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~----~l~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AAN----ELTSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGG----TCTTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHH----HhCCeEEEC
Confidence 44 567888765 5667777 664 34665 7789999998 565543221 122 223466666
Q ss_pred eeccCCcccccchhhccccc
Q 013951 410 VEVDLPITTSNYLCKISCNS 429 (433)
Q Consensus 410 ~~~~~~~~l~~ai~~il~~~ 429 (433)
+ .+.+.++++|.++|+++
T Consensus 403 p--~d~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 403 P--YDRDEVAAALDRALTMS 420 (482)
T ss_dssp T--TCHHHHHHHHHHHHTCC
T ss_pred C--CCHHHHHHHHHHHHcCC
Confidence 5 46788999999999864
No 249
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=30.44 E-value=51 Score=29.11 Aligned_cols=32 Identities=19% Similarity=0.160 Sum_probs=26.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+||+++=.|+.|- .+|..|.++||+|+++.-.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcC
Confidence 5799998888874 4688999999999999865
No 250
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=30.39 E-value=2.1e+02 Score=25.10 Aligned_cols=34 Identities=18% Similarity=0.125 Sum_probs=25.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|.++++..+ |-+ =.++|+.|.++|++|.++.-.
T Consensus 8 ~k~vlVTGas-~gI--G~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 8 GRTAFVTGGA-NGV--GIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp TCEEEEETTT-STH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEcCCc-hHH--HHHHHHHHHHCCCEEEEEECC
Confidence 4577777444 444 368899999999999887643
No 251
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=30.37 E-value=42 Score=26.86 Aligned_cols=36 Identities=8% Similarity=0.104 Sum_probs=25.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+|+++....+=... ++.-.+.|.+.|++|+++++..
T Consensus 10 ~v~il~~~gFe~~E-~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 10 ILYVMSGQNFQDEE-YFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp EEEECCSEEECHHH-HHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCCccHHH-HHHHHHHHHHCCCEEEEEECCC
Confidence 45555555444444 6777888999999999999764
No 252
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=30.30 E-value=72 Score=22.91 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=25.8
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHH-------cCCCcEEEecc
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHGF 147 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~-------~giP~v~~~~~ 147 (433)
...+.+++ .+||+||.|.... .+..+++. .++|++.++..
T Consensus 38 ~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 86 (127)
T 3i42_A 38 DALHAMST--RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGF 86 (127)
T ss_dssp HHHHHHHH--SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC
T ss_pred HHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECC
Confidence 44555667 7899999997554 45555443 34777776543
No 253
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=30.06 E-value=1.1e+02 Score=25.86 Aligned_cols=38 Identities=5% Similarity=-0.040 Sum_probs=27.5
Q ss_pred CcEEEEEcC-----CCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 7 QVHFLLLPY-----LAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 7 ~~~il~~~~-----~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
.+||+|+.. ++. -..=+....+.|.+.|++|+++++..
T Consensus 23 ~kkV~ill~~~~~~dG~-e~~E~~~p~~vL~~aG~~V~~~S~~~ 65 (242)
T 3l3b_A 23 ALNSAVILAGCGHMDGS-EIREAVLVMLELDRHNVNFKCFAPNK 65 (242)
T ss_dssp -CEEEEECCCSSTTTSC-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cCEEEEEEecCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 368888876 332 33336666788899999999999873
No 254
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=30.05 E-value=56 Score=27.13 Aligned_cols=37 Identities=19% Similarity=0.114 Sum_probs=28.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
...+++.++..|+..-...+++.|.++|++|..+-.+
T Consensus 12 ~~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 12 KKHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 3455555677788887889999999999998777554
No 255
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.97 E-value=65 Score=23.80 Aligned_cols=40 Identities=8% Similarity=0.172 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|. .. .+..+.+.+ ++|++.++...
T Consensus 39 ~a~~~l~~--~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 39 EAFTFLRR--EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHTT--SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHhc--cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 44455666 7999999998 54 334444432 58888876654
No 256
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=29.95 E-value=44 Score=28.75 Aligned_cols=33 Identities=18% Similarity=0.074 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++||++. |+ |.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~~ilVt--Ga-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSF--GH-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEE--TC-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEE--CC-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 3566665 46 7665 57889999999999999854
No 257
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=29.91 E-value=65 Score=27.45 Aligned_cols=37 Identities=19% Similarity=-0.083 Sum_probs=29.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
...+++..+..|+..-...+++.|.++|++|..+-.+
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 3455666677788888899999999999998877655
No 258
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.84 E-value=63 Score=26.44 Aligned_cols=34 Identities=12% Similarity=0.164 Sum_probs=23.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHH-HCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLA-QHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~-~rGH~Vt~~~~~ 44 (433)
+|.++++ |+.|-+- .+++++|. ++||+|+.+.-.
T Consensus 5 mk~vlVt-Gasg~iG--~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITIL-GAAGQIA--QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEE-STTSHHH--HHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEE-eCCcHHH--HHHHHHHHhcCCceEEEEecC
Confidence 3544555 5555553 68899999 899999988744
No 259
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=29.65 E-value=74 Score=28.12 Aligned_cols=33 Identities=27% Similarity=0.326 Sum_probs=26.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+||+++=.|+.|- .+|..|.++||+|+++.-..
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh
Confidence 5899987777663 56889999999999998653
No 260
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=29.60 E-value=87 Score=22.76 Aligned_cols=40 Identities=10% Similarity=0.064 Sum_probs=26.1
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
..+.+++ ..||+||.|.... .+..+++.+ ++|++.++...
T Consensus 39 al~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (132)
T 3crn_A 39 GLAKIEN--EFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYA 85 (132)
T ss_dssp HHHHHHH--SCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCC
T ss_pred HHHHHhc--CCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccc
Confidence 3445566 7899999997654 455454433 57888876554
No 261
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=29.60 E-value=49 Score=29.32 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=21.8
Q ss_pred EEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 11 LLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 11 l~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
++++ |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 12 vlVT-GatGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 12 ACVV-GGTGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp EEEE-CTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred EEEE-CCchHHH--HHHHHHHHHCCCEEEEEEc
Confidence 4455 5666554 4688999999999997653
No 262
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=29.52 E-value=56 Score=27.36 Aligned_cols=34 Identities=12% Similarity=0.006 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|.++++. +.|-+ =.++|+.|.++|++|.++.-.
T Consensus 7 ~k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 7 ARRVLVYG-GRGAL--GSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCEEEEET-TTSHH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEC-CCcHH--HHHHHHHHHhCCCEEEEEeCC
Confidence 35666664 44434 368899999999999988643
No 263
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=29.51 E-value=54 Score=24.93 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=26.8
Q ss_pred EEEEcCCCCCChHH--HHHHHHHHHHCCCEEEEEECCcch
Q 013951 10 FLLLPYLAPGHLIP--MFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 10 il~~~~~~~GH~~P--~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
+.++..+-+|+... .+.+|..+.+.||+|.++-.....
T Consensus 9 ~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV 48 (136)
T 2hy5_B 9 MYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGV 48 (136)
T ss_dssp EEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGG
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHH
Confidence 34445555666444 577799999999999999877443
No 264
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=29.46 E-value=76 Score=26.66 Aligned_cols=40 Identities=18% Similarity=0.167 Sum_probs=25.9
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|...++. |+++++. +.|-+- .++|++|.++|++|.++.-.
T Consensus 1 M~~~l~~-k~vlVTG-as~gIG--~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 1 MTQRLKD-KLAVITG-GANGIG--RAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp --CTTTT-CEEEEET-TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCCC-CEEEEeC-CCcHHH--HHHHHHHHHCCCEEEEEcCC
Confidence 4444433 4566664 444443 67999999999999988643
No 265
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=29.39 E-value=1.7e+02 Score=23.93 Aligned_cols=33 Identities=18% Similarity=0.177 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|+++++.++ |-+ =.++|++|.++|++|.++.-.
T Consensus 3 k~vlITGas-~gI--G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 3 KVAVITGAS-RGI--GEAIARALARDGYALALGARS 35 (235)
T ss_dssp CEEEEESCS-SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 567777554 333 368899999999999887643
No 266
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=29.37 E-value=53 Score=25.79 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=21.8
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCC
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 309 (433)
+.|+++||-.....+.++..++.+.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6799999997766677777788887653
No 267
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=29.32 E-value=57 Score=27.61 Aligned_cols=39 Identities=23% Similarity=0.249 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCCCCh--HHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHL--IPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~--~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++.-++++..+..+|- .-+..+|+.|+++|+.|..+-..
T Consensus 54 ~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 54 SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 3456788888888874 34788999999999999888655
No 268
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=29.27 E-value=59 Score=26.53 Aligned_cols=37 Identities=22% Similarity=0.019 Sum_probs=29.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+.+++.++..|+..-+..+++.|.++|+.|..+-.+
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 58 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLFS 58 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCCC
Confidence 4566677788888888899999999999987665433
No 269
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=29.26 E-value=35 Score=30.72 Aligned_cols=32 Identities=22% Similarity=0.180 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
++||+|+=.|..| ..+|..|.++||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 4689998666555 3478889999999998854
No 270
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=29.12 E-value=1.1e+02 Score=21.96 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=23.1
Q ss_pred CCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecch
Q 013951 116 LKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHGFS 148 (433)
Q Consensus 116 ~~pD~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 148 (433)
..||+||.|.... .+..+++.+ .+|++.++...
T Consensus 50 ~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (129)
T 3h1g_A 50 ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEG 91 (129)
T ss_dssp TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCC
Confidence 4799999998665 455555543 57888876654
No 271
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=29.10 E-value=80 Score=26.16 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=27.9
Q ss_pred cEEEEEcCCCCCC--hHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGH--LIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH--~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
...+++.++..|+ ..-+..+++.|.++|++|..+-.+
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 65 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMY 65 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecCC
Confidence 3456666788888 666788999999999988766544
No 272
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=29.10 E-value=1.1e+02 Score=24.28 Aligned_cols=49 Identities=10% Similarity=0.177 Sum_probs=35.7
Q ss_pred HHHHHhHHHHHHHHHhCCCCCcEEEECCCCc--c-------------hHHHHHHcCCCcEEEecch
Q 013951 98 KSLHMLQQPFENLFKEKTLKPCCIISDMCFP--W-------------TVDTAAKFNVPRIIFHGFS 148 (433)
Q Consensus 98 ~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~--~-------------~~~~A~~~giP~v~~~~~~ 148 (433)
.......+.+.+++++ .+||.+..+..++ - +..++...|||+.-+++..
T Consensus 46 ~RL~~I~~~l~~~i~~--~~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~~ 109 (166)
T 4ep4_A 46 ERVGRIHARVLEVLHR--FRPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPMQ 109 (166)
T ss_dssp HHHHHHHHHHHHHHHH--HCCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHHH
T ss_pred HHHHHHHHHHHHHHHH--hCCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHH
Confidence 3344566788899999 8999999887664 1 2455678899998876543
No 273
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=29.04 E-value=71 Score=23.51 Aligned_cols=41 Identities=10% Similarity=-0.047 Sum_probs=27.2
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc----CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF----NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~----giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+++.+ .+|++.++...
T Consensus 39 ~al~~~~~--~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~ 85 (136)
T 2qzj_A 39 EAIGKIFS--NKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYIN 85 (136)
T ss_dssp HHHHHHHH--CCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCC
Confidence 33445566 7899999997554 455555544 68888876554
No 274
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=29.02 E-value=2.2e+02 Score=23.77 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=24.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++..+.| + =.++|++|.++|++|.++.-
T Consensus 6 ~k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 6 EKVVIITGGSSG-M--GKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp TCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 367778755543 3 36889999999999988763
No 275
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=29.01 E-value=12 Score=18.62 Aligned_cols=17 Identities=24% Similarity=0.452 Sum_probs=14.0
Q ss_pred chhhHHHHHHcCCcEEe
Q 013951 368 GWNSSLEGISAGVQMLT 384 (433)
Q Consensus 368 G~gs~~eal~~GvP~v~ 384 (433)
|.|+++..+..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888888888765
No 276
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=29.00 E-value=83 Score=25.74 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++||+|+.+++.- ..-+....+.|...|++|++++..
T Consensus 9 ~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 9 SKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4689888887665 444677788999999999999986
No 277
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=28.94 E-value=81 Score=23.07 Aligned_cols=42 Identities=24% Similarity=0.241 Sum_probs=27.1
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc---chHHHHHH----cCCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP---WTVDTAAK----FNVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~---~~~~~A~~----~giP~v~~~~~~~ 149 (433)
...+.+++ .+||+||.|.... .+..+++. .++|+|.++....
T Consensus 45 ~a~~~~~~--~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 45 EAVRCAPD--LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQD 93 (140)
T ss_dssp HHHHHHHH--HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCC
T ss_pred HHHHHHHh--CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCC
Confidence 33445555 6899999997542 34444444 3799988866543
No 278
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.93 E-value=1.5e+02 Score=24.78 Aligned_cols=33 Identities=15% Similarity=0.107 Sum_probs=26.3
Q ss_pred HHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEec
Q 013951 109 NLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 109 ~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~ 146 (433)
+.+++ .+.|+||.|.. +..+|+++|+|.+.+.+
T Consensus 148 ~~l~~--~G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 148 NELKA--NGTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHH--TTCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHH--CCCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 33444 69999999854 58999999999998763
No 279
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=28.86 E-value=81 Score=27.73 Aligned_cols=35 Identities=20% Similarity=0.181 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+.++|+ ++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 10 ~~~~vl-VT-GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 10 EGSLVL-VT-GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TTCEEE-EE-TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEE-EE-CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 344554 44 5666654 57889999999999988743
No 280
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=28.83 E-value=47 Score=27.18 Aligned_cols=97 Identities=9% Similarity=-0.037 Sum_probs=52.2
Q ss_pred hhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEe-
Q 013951 268 PECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIR- 346 (433)
Q Consensus 268 ~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~- 346 (433)
.++-++|..++ ...||-|.. .......++....+-++|=++..... .. ....+.+.
T Consensus 48 ~~lg~~LA~~G---~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e~~--------~~-------~~~~~~~~~ 104 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDEEA--------GN-------PYLSVAVKT 104 (195)
T ss_dssp HHHHHHHHHTT---CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTTCC--------CC-------TTCSEEEEC
T ss_pred HHHHHHHHHCC---CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCccc--------CC-------CCcceeeec
Confidence 45666776654 455663322 23334445544555566555543211 00 01233333
Q ss_pred -Cccc-HhhhhcCCCceeeecccchhhHHH---HHHcCCcEEeccc
Q 013951 347 -GWAP-QVLILSHPAVGGFLTHCGWNSSLE---GISAGVQMLTWPL 387 (433)
Q Consensus 347 -~~~p-q~~lL~~~~~~~~ItHGG~gs~~e---al~~GvP~v~~P~ 387 (433)
...+ -..++..-+-..++-=||.||+.| ++.+|+|+++++.
T Consensus 105 ~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 105 GLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp CCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred CCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 2344 344444333345667799998776 6889999999973
No 281
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=28.77 E-value=91 Score=24.95 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
++||+++-.+....+ =+....+.|.+.|++|++++...
T Consensus 5 ~kkv~ill~~g~~~~-e~~~~~~~l~~ag~~v~~~s~~~ 42 (190)
T 4e08_A 5 SKSALVILAPGAEEM-EFIIAADVLRRAGIKVTVAGLNG 42 (190)
T ss_dssp CCEEEEEECTTCCHH-HHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEECCCchHH-HHHHHHHHHHHCCCEEEEEECCC
Confidence 468888887766443 36677789999999999999774
No 282
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=28.74 E-value=78 Score=25.40 Aligned_cols=39 Identities=33% Similarity=0.324 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCCCChHHH-HHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLIPM-FDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~-l~La~~L~~rGH~Vt~~~~~ 44 (433)
+.+||+++-....|+..-+ -.+++.|.+.|++|.++...
T Consensus 4 ~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 4 SSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp -CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 3457877776667775543 34566677789999988655
No 283
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=28.72 E-value=1.1e+02 Score=22.93 Aligned_cols=41 Identities=17% Similarity=0.352 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+++.+ ++|++.++...
T Consensus 42 ~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (153)
T 3cz5_A 42 EAYRLYRE--TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQ 89 (153)
T ss_dssp HHHHHHHT--TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCC
Confidence 34455566 7899999998654 444444433 68888876554
No 284
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=28.71 E-value=83 Score=26.75 Aligned_cols=40 Identities=20% Similarity=0.151 Sum_probs=25.0
Q ss_pred CCCcEEEEEcCCCC--CChHHHHH-HHHHHHHCCCEEEEEECC
Q 013951 5 ASQVHFLLLPYLAP--GHLIPMFD-IARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 5 ~~~~~il~~~~~~~--GH~~P~l~-La~~L~~rGH~Vt~~~~~ 44 (433)
++++||+++....+ |.-.-+.. +++.|.+.|++|.++-..
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~ 74 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPS 74 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 44578888876654 44333333 555666679998887543
No 285
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=28.51 E-value=2.3e+02 Score=23.76 Aligned_cols=35 Identities=17% Similarity=0.067 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..|+++++.++.| + =.++|++|+++|++|.++...
T Consensus 7 ~~k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~~~ 41 (259)
T 3edm_A 7 TNRTIVVAGAGRD-I--GRACAIRFAQEGANVVLTYNG 41 (259)
T ss_dssp TTCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECS
T ss_pred CCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 3467778855543 3 368999999999999887543
No 286
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=28.50 E-value=2.2e+02 Score=26.37 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=24.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+||+++-. | .....+++++.+.|++|.++.+.
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~ 34 (449)
T 2w70_A 3 DKIVIANR---G--EIALRILRACKELGIKTVAVHSS 34 (449)
T ss_dssp SEEEECCC---H--HHHHHHHHHHHHHTCEEEEEEEG
T ss_pred ceEEEeCC---c--HHHHHHHHHHHHcCCeEEEEecc
Confidence 47777652 3 34678999999999999988654
No 287
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=28.40 E-value=71 Score=27.15 Aligned_cols=34 Identities=21% Similarity=0.078 Sum_probs=24.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|.++++.. .|-+ =.++|+.|.++||+|.++.-.
T Consensus 7 ~k~vlVTGa-s~gI--G~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 7 GKVALVTGA-AQGI--GRAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp TCEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC-CCcH--HHHHHHHHHHCCCEEEEEECC
Confidence 356677744 4433 357899999999999987643
No 288
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=28.30 E-value=1.7e+02 Score=22.64 Aligned_cols=95 Identities=14% Similarity=0.048 Sum_probs=59.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
.+|++.. ...+=.-++.+|+.|.+. ||++. .+......+++. . |+.+..+. ..+++
T Consensus 12 g~V~lsv--~D~dK~~~v~~ak~~~~ll~Gf~l~--AT~gTa~~L~e~---~-----Gl~v~~v~------k~~eG---- 69 (152)
T 1b93_A 12 KHIALVA--HDHCKQMLMSWVERHQPLLEQHVLY--ATGTTGNLISRA---T-----GMNVNAML------SGPMG---- 69 (152)
T ss_dssp CEEEEEE--CGGGHHHHHHHHHHTHHHHTTSEEE--EETTHHHHHHHH---H-----CCCCEEEC------CGGGT----
T ss_pred CEEEEEE--ehhhHHHHHHHHHHHHHHhCCCEEE--EccHHHHHHHHH---h-----CceeEEEE------ecCCC----
Confidence 4555554 344556789999999998 99654 444444444442 1 55554431 11111
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCC--Cc--------chHHHHHHcCCCcEE
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMC--FP--------WTVDTAAKFNVPRII 143 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~--~~--------~~~~~A~~~giP~v~ 143 (433)
-.+.+.+.+++ .+.|+||.-.- .. .-..+|-..+||++.
T Consensus 70 -----------------G~p~I~d~I~~--geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T 118 (152)
T 1b93_A 70 -----------------GDQQVGALISE--GKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVAT 118 (152)
T ss_dssp -----------------HHHHHHHHHHT--TCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEES
T ss_pred -----------------CCchHHHHHHC--CCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEe
Confidence 12468888999 99999996432 22 246678899999875
No 289
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=28.23 E-value=33 Score=30.50 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEE
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIV 41 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~ 41 (433)
..+||+|+=.|+.| ..+|..|+++||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 45789999777777 45788999999999999
No 290
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=28.20 E-value=43 Score=28.73 Aligned_cols=34 Identities=21% Similarity=0.087 Sum_probs=25.7
Q ss_pred EEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 11 LLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 11 l~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+++.+|..|+-.-+..+|+.|+++|++|..+-.+
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~Dl~ 87 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLT 87 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECCCT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 4455787788777888999999999988765433
No 291
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=28.18 E-value=86 Score=26.03 Aligned_cols=37 Identities=8% Similarity=-0.053 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCCCCh----HHHHHHHHHHHHCCCEEEEEEC
Q 013951 7 QVHFLLLPYLAPGHL----IPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 7 ~~~il~~~~~~~GH~----~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.++|.+++....+.- .-...|++.|+++|+.|..-..
T Consensus 13 m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg 53 (215)
T 2a33_A 13 FRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGG 53 (215)
T ss_dssp CSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 346999987766532 3467888889999988865544
No 292
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=28.10 E-value=50 Score=26.13 Aligned_cols=37 Identities=19% Similarity=0.256 Sum_probs=28.2
Q ss_pred cEEEEEcCCCC--C-ChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAP--G-HLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~--G-H~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+|+++|.=+. . =-.+...|++.|.++|.+|.|..++
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 46777763321 1 2357889999999999999999988
No 293
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=28.09 E-value=46 Score=28.07 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=27.6
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
+.+||.|+=.|..|- .||+.|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 456899999998885 579999999999998765
No 294
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=28.06 E-value=51 Score=29.16 Aligned_cols=33 Identities=9% Similarity=0.036 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+++|+++..+ ....+++++.++||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 3589988865 46789999999999999887663
No 295
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=28.04 E-value=67 Score=22.89 Aligned_cols=37 Identities=22% Similarity=0.441 Sum_probs=23.1
Q ss_pred HHHHhCCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecc
Q 013951 109 NLFKEKTLKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHGF 147 (433)
Q Consensus 109 ~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 147 (433)
+.+++ .+||++|.|.... .+..+++.+ .+|++.++..
T Consensus 39 ~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 84 (124)
T 1mb3_A 39 SIARE--NKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAF 84 (124)
T ss_dssp HHHHH--HCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC--
T ss_pred HHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECC
Confidence 44555 6899999998654 455555433 5787776543
No 296
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=28.02 E-value=3e+02 Score=23.95 Aligned_cols=107 Identities=11% Similarity=0.113 Sum_probs=62.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGC 82 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (433)
..++||+++.++. || -+.+|...-.+. ..+|..+.+.. ...+...+.. ++.+..++. ..
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~--~~~~~~A~~~-----gIp~~~~~~---------~~ 153 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNH--PDFAPLAAQH-----GLPFRHFPI---------TA 153 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESS--STTHHHHHHT-----TCCEEECCC---------CS
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCc--HHHHHHHHHc-----CCCEEEeCC---------Cc
Confidence 3467898888555 55 355555555443 46777776432 2233333333 677776541 10
Q ss_pred CCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCC-cchHHHHHHcCCCcEEEecc
Q 013951 83 ENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCF-PWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~-~~~~~~A~~~giP~v~~~~~ 147 (433)
. .. ....+.+.+.+++ .++|+||.=.+. .-...+.+.+.-.++-++++
T Consensus 154 ~------~r---------~~~~~~~~~~l~~--~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 154 D------TK---------AQQEAQWLDVFET--SGAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp S------CH---------HHHHHHHHHHHHH--HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred C------CH---------HHHHHHHHHHHHH--hCCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 0 00 0123467778888 899999976654 45666777777777776443
No 297
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=28.00 E-value=29 Score=31.56 Aligned_cols=39 Identities=5% Similarity=0.028 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCCCCh----HHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHL----IPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~----~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+++||+++..+..+-. .-...++++|.++||+|..+...
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4678999885443333 34477889998999999988644
No 298
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=27.98 E-value=2.5e+02 Score=23.08 Aligned_cols=35 Identities=26% Similarity=0.244 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+.|+++++.++ |-+- .++|+.|.++|++|.++.-.
T Consensus 13 ~~k~vlITGas-~gIG--~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 13 KGRVILVTGAA-RGIG--AAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TTCEEEESSTT-SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCC-ChHH--HHHHHHHHHCCCEEEEEecC
Confidence 34677887544 4443 57899999999999887643
No 299
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=27.87 E-value=1.1e+02 Score=21.23 Aligned_cols=32 Identities=16% Similarity=0.192 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
..+|+++|.. | ......+..|.+.|++|..+.
T Consensus 56 ~~~ivvyC~~--g--~rs~~a~~~L~~~G~~v~~l~ 87 (100)
T 3foj_A 56 NETYYIICKA--G--GRSAQVVQYLEQNGVNAVNVE 87 (100)
T ss_dssp TSEEEEECSS--S--HHHHHHHHHHHTTTCEEEEET
T ss_pred CCcEEEEcCC--C--chHHHHHHHHHHCCCCEEEec
Confidence 3578888843 3 446778889999999877654
No 300
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=27.82 E-value=84 Score=23.26 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=24.2
Q ss_pred HHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEec
Q 013951 108 ENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHG 146 (433)
Q Consensus 108 ~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~ 146 (433)
.+.+++ .+||+||.|.... .+..+++.+ ++|+|.++.
T Consensus 42 l~~~~~--~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~ 85 (141)
T 3cu5_A 42 IQIALK--HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSG 85 (141)
T ss_dssp HHHHTT--SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECC
T ss_pred HHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeC
Confidence 345555 6899999998654 455555543 577777644
No 301
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=27.70 E-value=2.3e+02 Score=23.42 Aligned_cols=34 Identities=21% Similarity=0.074 Sum_probs=24.7
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|.++++.++ |-+ =.++|++|.++|++|.++...
T Consensus 4 ~k~~lVTGas-~gI--G~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 4 TKSALVTGAS-RGI--GRSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp SCEEEETTCS-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3577777544 433 367899999999999887643
No 302
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=27.69 E-value=2.7e+02 Score=23.30 Aligned_cols=30 Identities=17% Similarity=0.154 Sum_probs=22.4
Q ss_pred CCCcEEE-ECCCCc-chHHHHHHcCCCcEEEe
Q 013951 116 LKPCCII-SDMCFP-WTVDTAAKFNVPRIIFH 145 (433)
Q Consensus 116 ~~pD~vI-~D~~~~-~~~~~A~~~giP~v~~~ 145 (433)
..||++| .|+..- -+..=|.++|||+|.+.
T Consensus 156 ~~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaiv 187 (231)
T 3bbn_B 156 GLPDIVIIVDQQEEYTALRECITLGIPTICLI 187 (231)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHTTTCCEEECC
T ss_pred cCCCEEEEeCCccccHHHHHHHHhCCCEEEEe
Confidence 3699977 565443 57777889999999863
No 303
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.65 E-value=2.1e+02 Score=24.60 Aligned_cols=35 Identities=17% Similarity=0.319 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+.|+++++.++.| + =.++|+.|+++|++|.++.-.
T Consensus 11 ~~k~vlITGas~G-I--G~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG-I--GFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 4578888865543 3 358899999999999888743
No 304
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=27.65 E-value=1.6e+02 Score=25.44 Aligned_cols=34 Identities=24% Similarity=0.031 Sum_probs=25.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++.++. -+ =.++|++|+++|++|.++.-.
T Consensus 49 ~k~vlVTGas~-GI--G~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDS-GI--GRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTS-HH--HHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 46788885544 33 368999999999999887644
No 305
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=27.64 E-value=1e+02 Score=24.28 Aligned_cols=38 Identities=18% Similarity=-0.013 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCCCChHHHHH--HHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFD--IARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~--La~~L~~rGH~Vt~~~~~ 44 (433)
....+++..+..|+..-... +++.|.++|+.|..+-.+
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 70 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLP 70 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCT
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCC
Confidence 34566777788888888887 599999999998877554
No 306
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=27.61 E-value=1e+02 Score=22.69 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=23.5
Q ss_pred CCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 116 LKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 116 ~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
.+||+||.|.... .+..+.+.+ ++|++.++....
T Consensus 48 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 88 (143)
T 3jte_A 48 NSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGD 88 (143)
T ss_dssp TTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTC
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 6999999998654 455555433 588888766543
No 307
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=27.47 E-value=2.9e+02 Score=23.76 Aligned_cols=33 Identities=21% Similarity=0.113 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++.++.| + =.++|+.|+++|++|.++.-
T Consensus 28 gk~~lVTGas~G-I--G~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 28 GKVAFITGAARG-Q--GRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEec
Confidence 467888865543 3 36889999999999998864
No 308
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=27.45 E-value=93 Score=22.70 Aligned_cols=42 Identities=17% Similarity=0.384 Sum_probs=27.1
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc-------chHHHHHHc-----CCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP-------WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~-------~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
...+.+++ .+||+||.|.... .+..+.+.+ ++|++.++....
T Consensus 38 ~a~~~l~~--~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 91 (140)
T 2qr3_A 38 SLSTVLRE--ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYAD 91 (140)
T ss_dssp HHHHHHHH--SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGG
T ss_pred HHHHHHHc--CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 44455666 7899999997542 344444432 689888766543
No 309
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=27.27 E-value=69 Score=24.29 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=26.2
Q ss_pred EEEEEcCCCCCChHH-HHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIP-MFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P-~l~La~~L~~rGH~Vt~~~~~ 44 (433)
||+++-+..+|+..- .-.|++.|.++|++|.++...
T Consensus 3 ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 3 KVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp EEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred eEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 666666667888754 344677777889999998765
No 310
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=27.24 E-value=35 Score=30.42 Aligned_cols=35 Identities=20% Similarity=0.117 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+...||.|+=.|..| ..+|..|+++||+|+++-..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 455789999777666 46788999999999998654
No 311
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=27.17 E-value=35 Score=25.80 Aligned_cols=33 Identities=21% Similarity=0.200 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+.||+++=.+..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4578877544333 57899999999999999865
No 312
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=27.09 E-value=79 Score=26.82 Aligned_cols=41 Identities=15% Similarity=-0.041 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCCCCcEEEECCCCc-------chHHHHHHcCCCcEEE
Q 013951 104 QQPFENLFKEKTLKPCCIISDMCFP-------WTVDTAAKFNVPRIIF 144 (433)
Q Consensus 104 ~~~l~~~l~~~~~~pD~vI~D~~~~-------~~~~~A~~~giP~v~~ 144 (433)
.+.+.++++.+..+||++++|..-. -+..+.-.+++|+|-+
T Consensus 96 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 96 LPLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 3556666666557999999998664 2233445668998876
No 313
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=27.04 E-value=62 Score=25.39 Aligned_cols=28 Identities=25% Similarity=0.242 Sum_probs=22.5
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCC
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 309 (433)
.+|+++||........++..++++++.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998767777888888887753
No 314
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=26.94 E-value=61 Score=28.68 Aligned_cols=31 Identities=26% Similarity=0.189 Sum_probs=22.9
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 10 FLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 10 il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.++++ |+.|-+- ..|++.|.++||+|+.+.-
T Consensus 7 ~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 7 TILVT-GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp EEEEE-TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred EEEEe-cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 44555 5556554 5789999999999998864
No 315
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=26.94 E-value=1.1e+02 Score=21.91 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc------CCCcEEEecc
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF------NVPRIIFHGF 147 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~------giP~v~~~~~ 147 (433)
...+.+++ .+||+||.|.... .+..+++.+ ..|.+.+.+.
T Consensus 41 ~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~ 88 (132)
T 3lte_A 41 DAGIKLST--FEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSG 88 (132)
T ss_dssp HHHHHHHH--TCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECC
T ss_pred HHHHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeC
Confidence 33445566 7999999998654 455555543 3455555443
No 316
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=26.93 E-value=75 Score=26.72 Aligned_cols=38 Identities=16% Similarity=0.072 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+..++++..+..|+..-+..+++.|.++|++|..+-.+
T Consensus 41 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (303)
T 3pe6_A 41 PKALIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHV 78 (303)
T ss_dssp CSEEEEEECCTTCCGGGGHHHHHHHHHTTEEEEEECCT
T ss_pred CCeEEEEECCCCchhhHHHHHHHHHHhCCCcEEEeCCC
Confidence 34566666677787777888999999999888776544
No 317
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=26.91 E-value=1.2e+02 Score=21.82 Aligned_cols=41 Identities=17% Similarity=0.154 Sum_probs=25.9
Q ss_pred HHHHHHHhCCC-CCcEEEECCCCc---chHHHHHHc-----CCCcEEEecch
Q 013951 106 PFENLFKEKTL-KPCCIISDMCFP---WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~-~pD~vI~D~~~~---~~~~~A~~~-----giP~v~~~~~~ 148 (433)
...+.+++ . +||+||.|.... .+..+++.+ ++|++.++...
T Consensus 40 ~a~~~l~~--~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 89 (132)
T 2rdm_A 40 KAIEMLKS--GAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHA 89 (132)
T ss_dssp HHHHHHHT--TCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred HHHHHHHc--CCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCc
Confidence 33445555 5 899999997543 344444433 58888876543
No 318
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=26.86 E-value=1.8e+02 Score=24.22 Aligned_cols=32 Identities=16% Similarity=0.065 Sum_probs=23.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
|.++++ ++.|-+ =.++|++|.++|++|+++.-
T Consensus 8 k~vlIT-Gasggi--G~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 8 KVVVIT-GSSTGL--GKSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEe-CCCChH--HHHHHHHHHHCCCEEEEEcC
Confidence 455666 445544 36899999999999998875
No 319
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=26.84 E-value=40 Score=29.55 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
++||+|+=.|..| ..+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 3588888665555 4578999999999999864
No 320
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=26.83 E-value=76 Score=27.31 Aligned_cols=41 Identities=12% Similarity=0.157 Sum_probs=31.5
Q ss_pred HHHHHHHHHhCCCCCcEEEECCCCc------chHHHHHHcCCCcEEEec
Q 013951 104 QQPFENLFKEKTLKPCCIISDMCFP------WTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 104 ~~~l~~~l~~~~~~pD~vI~D~~~~------~~~~~A~~~giP~v~~~~ 146 (433)
...+.+++++ .+||+||+-.-.. -+..+|..+|+|.+...+
T Consensus 101 a~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 101 GRILTEVIKK--EAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHH--HCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455666777 6899999876552 679999999999998644
No 321
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=26.82 E-value=2.1e+02 Score=24.43 Aligned_cols=33 Identities=27% Similarity=0.107 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++..+.| + =.++|+.|+++|++|.++.-
T Consensus 11 ~k~~lVTGas~g-I--G~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG-Q--GRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEec
Confidence 467888855543 3 36899999999999998853
No 322
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=26.78 E-value=80 Score=26.27 Aligned_cols=42 Identities=21% Similarity=0.181 Sum_probs=22.4
Q ss_pred CCCCCcEEEEEc-CCCC----CChHHH--HHHHHHHHHCCCEEEEEECC
Q 013951 3 SEASQVHFLLLP-YLAP----GHLIPM--FDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 3 ~~~~~~~il~~~-~~~~----GH~~P~--l~La~~L~~rGH~Vt~~~~~ 44 (433)
+..+++||+++. +|-. +-.+-. -.+++.|.+.||+|.++-..
T Consensus 21 ~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 21 QSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp ---CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred ccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 344455666665 4432 223332 23555566789999987754
No 323
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=26.77 E-value=71 Score=27.64 Aligned_cols=38 Identities=13% Similarity=0.174 Sum_probs=30.1
Q ss_pred cEEEEEc--CCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 8 VHFLLLP--YLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~--~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
.|++.+. -++-|--.-...||..|+++|++|.++=...
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 3444444 3577888889999999999999999997665
No 324
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=26.76 E-value=1.1e+02 Score=21.82 Aligned_cols=40 Identities=15% Similarity=0.130 Sum_probs=26.0
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecch
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHGFS 148 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~~ 148 (433)
..+.+++ .+||++|.|.... .+..+++.+ .+|++.++...
T Consensus 41 a~~~~~~--~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~ 89 (128)
T 1jbe_A 41 ALNKLQA--GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEA 89 (128)
T ss_dssp HHHHHTT--CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSC
T ss_pred HHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCc
Confidence 3345556 7899999998654 455555543 46777776543
No 325
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=26.73 E-value=1e+02 Score=24.75 Aligned_cols=37 Identities=11% Similarity=0.090 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++||+|+.+++.... -+....+.|.+.|++|++++..
T Consensus 3 ~~~v~ill~~g~~~~-e~~~~~~~l~~ag~~v~~vs~~ 39 (197)
T 2rk3_A 3 SKRALVILAKGAEEM-ETVIPVDVMRRAGIKVTVAGLA 39 (197)
T ss_dssp CCEEEEEECTTCCHH-HHHHHHHHHHHTTCEEEEEETT
T ss_pred CCEEEEEECCCCcHH-HHHHHHHHHHHCCCEEEEEEcC
Confidence 458888887766443 3667788899999999999975
No 326
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=26.72 E-value=85 Score=24.65 Aligned_cols=28 Identities=29% Similarity=0.334 Sum_probs=23.4
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCC
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASN 309 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 309 (433)
.+|+++||......+.+...++.++..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998778888888888888753
No 327
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=26.71 E-value=2.2e+02 Score=24.16 Aligned_cols=55 Identities=16% Similarity=0.209 Sum_probs=35.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEE
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLI 67 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (433)
-|+++++.++.| + =.++|+.|++.|.+|.++.- +.+.+++..+.....+....+.
T Consensus 7 gKvalVTGas~G-I--G~aiA~~la~~Ga~Vv~~~~--~~~~~~~~~~~i~~~g~~~~~~ 61 (254)
T 4fn4_A 7 NKVVIVTGAGSG-I--GRAIAKKFALNDSIVVAVEL--LEDRLNQIVQELRGMGKEVLGV 61 (254)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES--CHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEeCCCCH-H--HHHHHHHHHHcCCEEEEEEC--CHHHHHHHHHHHHhcCCcEEEE
Confidence 478999977665 3 46789999999999988763 3444444444433334334333
No 328
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=26.70 E-value=82 Score=22.63 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=24.9
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-------CCCcEEEecc
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-------NVPRIIFHGF 147 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-------giP~v~~~~~ 147 (433)
..+.+++ .+||+||.|.... .+..+++.+ ++|++.++..
T Consensus 43 a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 90 (129)
T 1p6q_A 43 GMKIMAQ--NPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFIILTAQ 90 (129)
T ss_dssp HHHHHHT--SCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEECCSC
T ss_pred HHHHHHc--CCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEEEeCC
Confidence 3445566 7899999998654 455566544 3566665444
No 329
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=26.70 E-value=1.1e+02 Score=23.74 Aligned_cols=38 Identities=13% Similarity=0.103 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
.+||+|+..+..-.. -+....+.|.+.|++|.++++..
T Consensus 2 ~~ki~il~~~g~~~~-e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGFEDL-ELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTBCHH-HHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCccHH-HHHHHHHHHHHCCCEEEEEECCC
Confidence 468999988765443 36677888999999999999764
No 330
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.65 E-value=82 Score=23.16 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=25.3
Q ss_pred HHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 108 ENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 108 ~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
.+.+++ .+||+||.|.... .+..+++.+ .+|++.++...
T Consensus 41 ~~~l~~--~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~ 86 (137)
T 3cfy_A 41 IQFIER--SKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHG 86 (137)
T ss_dssp HHHHHH--HCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSC
T ss_pred HHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecC
Confidence 344555 6899999998654 455555543 57777776544
No 331
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=26.62 E-value=1.1e+02 Score=22.31 Aligned_cols=38 Identities=8% Similarity=0.144 Sum_probs=23.9
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
|...+++.+|+++- .+-.-...|.+.|.+.|++|..+.
T Consensus 1 M~~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~ 38 (142)
T 3cg4_A 1 MSLAEHKGDVMIVD----DDAHVRIAVKTILSDAGFHIISAD 38 (142)
T ss_dssp -----CCCEEEEEC----SCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHCCeEEEEeC
Confidence 45556677888875 455666778888888888876544
No 332
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=26.61 E-value=1.9e+02 Score=24.40 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..|+++++..+ |-+- .++|++|.++|++|.++...
T Consensus 24 ~~k~vlITGas-~gIG--~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGGM-GGLG--AAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTTT-SHHH--HHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECCC-chHH--HHHHHHHHHCCCEEEEEcCC
Confidence 45788888554 4333 58899999999999888744
No 333
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=26.61 E-value=39 Score=29.67 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+||.|+=.+..|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 35799987777775 5788899999999988654
No 334
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=26.51 E-value=1.3e+02 Score=21.93 Aligned_cols=38 Identities=13% Similarity=0.176 Sum_probs=23.8
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc----------CCCcEEEec
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF----------NVPRIIFHG 146 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~----------giP~v~~~~ 146 (433)
..+.+++ .+||+||.|.... .+..+++.+ .+|++.++.
T Consensus 46 al~~l~~--~~~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~ 95 (140)
T 3c97_A 46 ALQAYQN--RQFDVIIMDIQMPVMDGLEAVSEIRNYERTHNTKRASIIAITA 95 (140)
T ss_dssp HHHHHHH--SCCSEEEECTTCCSSCHHHHHHHHHHHHHHHTCCCCCCEEEES
T ss_pred HHHHHhc--CCCCEEEEeCCCCCCcHHHHHHHHHhhhhhcCCCceEEEEEeC
Confidence 3345556 7899999998654 455555443 356666543
No 335
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=26.49 E-value=75 Score=23.83 Aligned_cols=41 Identities=17% Similarity=0.155 Sum_probs=27.1
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+.+.+ ++|++.++...
T Consensus 52 ~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 99 (152)
T 3eul_A 52 AALELIKA--HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHD 99 (152)
T ss_dssp HHHHHHHH--HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCC
T ss_pred HHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccC
Confidence 44555666 6899999998654 455555433 57888776554
No 336
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=26.45 E-value=41 Score=30.67 Aligned_cols=29 Identities=31% Similarity=0.281 Sum_probs=23.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEE
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIV 41 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~ 41 (433)
+||+|+=.+--| +.+|..|+++||+|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 578887655333 77889999999999998
No 337
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=26.41 E-value=1.8e+02 Score=28.21 Aligned_cols=79 Identities=11% Similarity=0.093 Sum_probs=45.3
Q ss_pred hHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCccc----------HhhhhcCCCceeeecc
Q 013951 297 QLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAP----------QVLILSHPAVGGFLTH 366 (433)
Q Consensus 297 ~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~p----------q~~lL~~~~~~~~ItH 366 (433)
..+.+++.|++.+++.++-+.+..... +-+.+. ..+.+....-.. +..+-.++.+ +++|
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~~------l~~al~---~~~~i~~i~~~~E~~Aa~~A~Gyar~tg~p~v--~~~T 82 (590)
T 1ybh_A 14 GADILVEALERQGVETVFAYPGGASME------IHQALT---RSSSIRNVLPRHEQGGVFAAEGYARSSGKPGI--CIAT 82 (590)
T ss_dssp HHHHHHHHHHTTTCCEEEECCCGGGHH------HHHHHH---HCSSCEECCCSSHHHHHHHHHHHHHHHSSCEE--EEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCchHH------HHHHHh---ccCCccEEeeCCHHHHHHHHHHHHHHHCCCEE--EEec
Confidence 356677777777877777766643211 111111 112333222111 1122234555 8999
Q ss_pred cchh------hHHHHHHcCCcEEecc
Q 013951 367 CGWN------SSLEGISAGVQMLTWP 386 (433)
Q Consensus 367 GG~g------s~~eal~~GvP~v~~P 386 (433)
.|.| .+.||-+.++|+|++.
T Consensus 83 sGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 83 SGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp TTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred cCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 9965 7789999999999985
No 338
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=26.41 E-value=90 Score=22.90 Aligned_cols=41 Identities=27% Similarity=0.332 Sum_probs=26.5
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+++.+ .+|.+.++...
T Consensus 35 ~a~~~~~~--~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~ 82 (139)
T 2jk1_A 35 AAIAILEE--EWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYT 82 (139)
T ss_dssp HHHHHHHH--SCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCT
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 33445566 6899999998654 455555443 47777776544
No 339
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=26.35 E-value=61 Score=28.45 Aligned_cols=30 Identities=20% Similarity=0.216 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
.||.|+=.+..|. ++|+.|.++||+|++.-
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 4899998888884 68999999999998763
No 340
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=26.26 E-value=59 Score=25.67 Aligned_cols=42 Identities=12% Similarity=0.101 Sum_probs=27.6
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
...+.+++ .+||+||.|.... .|..+++.+ ++|++.++....
T Consensus 42 ~al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~lt~~~~ 90 (184)
T 3rqi_A 42 EALKLAGA--EKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILVLTGYAS 90 (184)
T ss_dssp HHHHHHTT--SCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred HHHHHHhh--CCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 33445566 7899999998654 455555433 588888766543
No 341
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=26.16 E-value=1.4e+02 Score=25.72 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=23.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
.|+++++.++. -+ =.++|++|+++|++|.++.
T Consensus 8 gk~vlVTGas~-GI--G~aia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 8 GKIAIVTGASS-GI--GRAAALLFAREGAKVVVTA 39 (280)
T ss_dssp TCEEEESSTTS-HH--HHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEE
Confidence 46788885554 33 3578999999999987754
No 342
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=26.14 E-value=82 Score=28.11 Aligned_cols=73 Identities=10% Similarity=0.039 Sum_probs=46.6
Q ss_pred CChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhH
Q 013951 293 LPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSS 372 (433)
Q Consensus 293 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~ 372 (433)
.+.+....+.+++.+...+.||...++... .++.++++...+-.+|.. ||-..-..++
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~LD~~~i~~~PK~--~~GySDiT~L 119 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGFNS--------------------NQLLPYLDYDLISENPKI--LCGFSDITAL 119 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGCCHHHHHHSCCE--EEECTTHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCchhH--------------------HHHhhhcchhhhccCCeE--EEecccccHH
Confidence 345667789999999999999988776432 123355555566566666 7766666666
Q ss_pred HHHHH--cCCcEEeccc
Q 013951 373 LEGIS--AGVQMLTWPL 387 (433)
Q Consensus 373 ~eal~--~GvP~v~~P~ 387 (433)
+-+++ .|+..+-=|.
T Consensus 120 ~~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 120 ATAIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHHHCBCEEECCC
T ss_pred HHHHHHhcCeEEEeCcc
Confidence 66654 3555444443
No 343
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=26.13 E-value=1.2e+02 Score=26.43 Aligned_cols=39 Identities=23% Similarity=0.157 Sum_probs=23.4
Q ss_pred CCCcEEEEE-cCCCCCChHH--HHHHHHHHHHCCCEEEEEEC
Q 013951 5 ASQVHFLLL-PYLAPGHLIP--MFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 5 ~~~~~il~~-~~~~~GH~~P--~l~La~~L~~rGH~Vt~~~~ 43 (433)
++++|||++ ..|-....+- .-...+.|.++||+|+++--
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 445666555 4554444443 23456778889999999853
No 344
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=26.05 E-value=2.4e+02 Score=24.14 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++.++.| + =.++|++|+++|++|.++.-
T Consensus 28 ~k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 28 SPVALITGAGSG-I--GRATALALAADGVTVGALGR 60 (283)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 467888855543 3 36889999999999988864
No 345
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=25.99 E-value=2.6e+02 Score=23.67 Aligned_cols=34 Identities=26% Similarity=0.110 Sum_probs=25.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++.++.| + =.++|+.|+++|++|.++.-.
T Consensus 10 ~k~~lVTGas~g-I--G~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARG-M--GRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCch-H--HHHHHHHHHHCCCeEEEEeCC
Confidence 367788865543 3 368899999999999988753
No 346
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=25.86 E-value=76 Score=26.35 Aligned_cols=36 Identities=17% Similarity=-0.041 Sum_probs=27.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..+++..+..|+..-+..+++.|.++|++|..+-.+
T Consensus 27 ~~vv~~hG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 62 (286)
T 3qit_A 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLF 62 (286)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CEEEEECCCCcccchHHHHHHHhhhcCeEEEEECCC
Confidence 455666677777777889999999999998777655
No 347
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=25.78 E-value=44 Score=29.83 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.++||.|+=.|..| ..+|..|.++||+|+++...
T Consensus 13 ~~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 46789998777776 57889999999999988643
No 348
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=25.72 E-value=60 Score=29.14 Aligned_cols=37 Identities=16% Similarity=0.298 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc-chHHHHHHcCCCcEEEe
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP-WTVDTAAKFNVPRIIFH 145 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~-~~~~~A~~~giP~v~~~ 145 (433)
.++++++ .+||+||...... ....+.+.+|||++.+.
T Consensus 88 n~E~Ila---l~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 88 DLESLIT---LQPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CHHHHHH---HCCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CHHHHhc---CCCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 4555555 4999999875432 22345577899999874
No 349
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=25.66 E-value=2e+02 Score=28.57 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcch
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
..+||++.- .|.+ .+.+++.+++.|+++..+.+..+.
T Consensus 27 m~~kILI~g---~Gei--a~~iiraar~lGi~~vav~s~~d~ 63 (675)
T 3u9t_A 27 SIQRLLVAN---RGEI--ACRVMRSARALGIGSVAVHSDIDR 63 (675)
T ss_dssp CCSEEEECC---CHHH--HHHHHHHHHHHTCEEEEEECSGGG
T ss_pred CCCEEEEEC---CCHH--HHHHHHHHHHCCCEEEEEECCCCC
Confidence 346777764 3333 788899999999999999876544
No 350
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=25.65 E-value=64 Score=23.78 Aligned_cols=40 Identities=23% Similarity=0.181 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHH-------cCCCcEEEecc
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHGF 147 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~-------~giP~v~~~~~ 147 (433)
...+.+++ .+||+||.|.... .+..+++. -++|++.++..
T Consensus 37 ~a~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 85 (140)
T 3n53_A 37 EALEQIDH--HHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSS 85 (140)
T ss_dssp HHHHHHHH--HCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecC
Confidence 34445566 6899999997654 23333332 46888877554
No 351
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=25.60 E-value=2.6e+02 Score=23.68 Aligned_cols=34 Identities=24% Similarity=0.089 Sum_probs=25.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++.++.| + =.++|+.|.++|++|.++.-.
T Consensus 10 gk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 10 DKVVLVTGGARG-Q--GRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCCh-H--HHHHHHHHHHCCCeEEEEccc
Confidence 467788855543 3 368999999999999988643
No 352
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=25.55 E-value=1e+02 Score=21.37 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=24.6
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHH-------cCCCcEEEecc
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHGF 147 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~-------~giP~v~~~~~ 147 (433)
..+.+++ .+||++|.|.... .+..+.+. -++|++.++..
T Consensus 37 ~~~~l~~--~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~ 84 (119)
T 2j48_A 37 ALDQLDL--LQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGE 84 (119)
T ss_dssp HHHHHHH--HCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESS
T ss_pred HHHHHHh--cCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCC
Confidence 3444555 6899999997543 34444433 36888887654
No 353
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=25.48 E-value=90 Score=23.64 Aligned_cols=42 Identities=10% Similarity=0.118 Sum_probs=27.4
Q ss_pred HHHHHHHHhCCC--CCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 105 QPFENLFKEKTL--KPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 105 ~~l~~~l~~~~~--~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
....+.+++ . +||+||.|.... .+..+++.+ ++|+|.++...
T Consensus 71 ~~al~~l~~--~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~ 121 (157)
T 3hzh_A 71 EEAVIKYKN--HYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALG 121 (157)
T ss_dssp HHHHHHHHH--HGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCC
T ss_pred HHHHHHHHh--cCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccC
Confidence 344555555 5 899999998654 455555443 58888876553
No 354
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=25.45 E-value=79 Score=25.37 Aligned_cols=38 Identities=13% Similarity=0.347 Sum_probs=26.0
Q ss_pred HHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecc
Q 013951 108 ENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGF 147 (433)
Q Consensus 108 ~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 147 (433)
.+.+++ .+||+||.|.... .+..+++.+ ++|++.++..
T Consensus 41 l~~~~~--~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 85 (208)
T 1yio_A 41 LEHRRP--EQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAH 85 (208)
T ss_dssp HHHCCT--TSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESC
T ss_pred HHhhhc--cCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 344555 7899999998654 455555543 5888887654
No 355
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=25.43 E-value=2.4e+02 Score=22.01 Aligned_cols=91 Identities=13% Similarity=0.099 Sum_probs=49.5
Q ss_pred HHHHHHHHHHCCCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCCCCCCCccHHHHHHHHHHh
Q 013951 24 MFDIARLLAQHGAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENCDLLPTTDFARFMKSLHML 103 (433)
Q Consensus 24 ~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (433)
+..+.+.|+++|+.+.++|.......++...+...... -+....+. .. ...
T Consensus 73 ~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~~~~~~--------~~----------~k~---------- 123 (187)
T 2wm8_A 73 VPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-YFVHREIY--------PG----------SKI---------- 123 (187)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEEEEEES--------SS----------CHH----------
T ss_pred HHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-hcceeEEE--------eC----------chH----------
Confidence 67788899999999999997653233444443331111 12222110 00 000
Q ss_pred HHHHHHHHHhCCCCC-c-EEEECCCCcchHHHHHHcCCCcEEEec
Q 013951 104 QQPFENLFKEKTLKP-C-CIISDMCFPWTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 104 ~~~l~~~l~~~~~~p-D-~vI~D~~~~~~~~~A~~~giP~v~~~~ 146 (433)
..+..+++.++..| + ++|-|. ......|+..|+++|.+..
T Consensus 124 -~~~~~~~~~~~~~~~~~~~igD~--~~Di~~a~~aG~~~i~v~~ 165 (187)
T 2wm8_A 124 -THFERLQQKTGIPFSQMIFFDDE--RRNIVDVSKLGVTCIHIQN 165 (187)
T ss_dssp -HHHHHHHHHHCCCGGGEEEEESC--HHHHHHHHTTTCEEEECSS
T ss_pred -HHHHHHHHHcCCChHHEEEEeCC--ccChHHHHHcCCEEEEECC
Confidence 12333444422333 2 566665 4567789999999887644
No 356
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=25.39 E-value=21 Score=31.52 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=28.5
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
|...++..+|+++=.+.-| +..|..|+++|++|+++-...
T Consensus 1 M~~~~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp CEEEEEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 4433445678887755444 678888999999999997653
No 357
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=25.32 E-value=42 Score=30.81 Aligned_cols=41 Identities=7% Similarity=-0.083 Sum_probs=30.0
Q ss_pred CCCCcEEEEEcCCCCCChHH----HHHHHHHHHHCCCEEEEEECC
Q 013951 4 EASQVHFLLLPYLAPGHLIP----MFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P----~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+|+++||+++..|..+--.- ...++++|.+.||+|+.+...
T Consensus 19 ~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 19 HMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp --CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 47788999999775555443 447888888889999998755
No 358
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=25.26 E-value=1.1e+02 Score=21.42 Aligned_cols=32 Identities=9% Similarity=0.078 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
...|+++|..+ ......+..|.+.|++|..+.
T Consensus 56 ~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~ 87 (103)
T 3eme_A 56 NEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVE 87 (103)
T ss_dssp TSEEEEECSSS----SHHHHHHHHHHTTTCEEEEET
T ss_pred CCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeC
Confidence 35688888433 246677888989999877654
No 359
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=25.22 E-value=64 Score=26.48 Aligned_cols=39 Identities=18% Similarity=-0.060 Sum_probs=31.5
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHC-CCEEEEEECCcc
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQH-GAIVTIVTTPVN 46 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~r-GH~Vt~~~~~~~ 46 (433)
++||+|+..+....+. +...++.|.++ |++|++++....
T Consensus 3 m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 3 LKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDPI 42 (206)
T ss_dssp CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSSE
T ss_pred ccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCCC
Confidence 5689999988887765 55778888888 999999998743
No 360
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=25.21 E-value=43 Score=30.31 Aligned_cols=38 Identities=3% Similarity=-0.143 Sum_probs=27.0
Q ss_pred CCCcEEEEEcCCCCC-C---hHHHHHHHHHHHHCCCEEEEEE
Q 013951 5 ASQVHFLLLPYLAPG-H---LIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 5 ~~~~~il~~~~~~~G-H---~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
|+++||+++..|..+ | +.....++++|.+.||+|..+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 456799988754333 3 3345568899999999999885
No 361
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=25.20 E-value=1.1e+02 Score=24.74 Aligned_cols=41 Identities=5% Similarity=-0.065 Sum_probs=35.1
Q ss_pred CCCCcEEEEEcCC-CCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 4 EASQVHFLLLPYL-APGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 4 ~~~~~~il~~~~~-~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
...+.+|.++..+ +.|-..-++.++..+..+|..|.++.+.
T Consensus 4 ~~~~g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~ 45 (191)
T 1xx6_A 4 PKDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPE 45 (191)
T ss_dssp CTTCCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3445678888888 8899999999999999999999999855
No 362
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=25.18 E-value=1.1e+02 Score=24.60 Aligned_cols=40 Identities=8% Similarity=0.119 Sum_probs=27.5
Q ss_pred HHHHHHHhCCCC--CcEEEECCCCcc------hHHHHHHcCCCcEEEe
Q 013951 106 PFENLFKEKTLK--PCCIISDMCFPW------TVDTAAKFNVPRIIFH 145 (433)
Q Consensus 106 ~l~~~l~~~~~~--pD~vI~D~~~~~------~~~~A~~~giP~v~~~ 145 (433)
.+.++++.+..+ +|+|+.|...++ ...+...+|+|+|.+.
T Consensus 51 ~i~~~~~~l~~~p~~~vvllDG~g~agfn~~di~~l~~~~~~P~I~V~ 98 (184)
T 2qh9_A 51 KLISMVRRSKFREQIKCIFLPGITLGGFNLVDIQRVYRETKIPVVVVM 98 (184)
T ss_dssp HHHHHHTTCTTTTTEEEEEESSSEETTTEECCHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHhcCCCCCCcEEEECCEeeccCCEeCHHHHHHhhCCCEEEEE
Confidence 444445443345 499999987652 2468889999999863
No 363
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=25.13 E-value=1.1e+02 Score=24.79 Aligned_cols=41 Identities=15% Similarity=0.103 Sum_probs=27.6
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
..+.+++ .+||+||.|.... .+..+++.+ ++|++.++....
T Consensus 38 a~~~~~~--~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~ 85 (225)
T 1kgs_A 38 GMYMALN--EPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSD 85 (225)
T ss_dssp HHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCH
T ss_pred HHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCC
Confidence 3345566 7899999998654 455555433 689888876543
No 364
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=25.13 E-value=1.4e+02 Score=23.31 Aligned_cols=49 Identities=14% Similarity=0.095 Sum_probs=38.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEECCcchhhhHHHHHHh
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHG--AIVTIVTTPVNAARFKTVIARA 57 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~ 57 (433)
.+|.+++ ++.+++.-+...++.|.+-| |+|.+++....-+++.++.++.
T Consensus 3 ~~V~Iim-gs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a 53 (159)
T 3rg8_A 3 PLVIILM-GSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEY 53 (159)
T ss_dssp CEEEEEE-SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHH
T ss_pred CeEEEEE-CcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHh
Confidence 3677777 89999999999999999887 6788888776666666665554
No 365
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=25.09 E-value=69 Score=26.75 Aligned_cols=31 Identities=16% Similarity=0.180 Sum_probs=22.4
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 10 FLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 10 il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.++++ |+.|-+- .+++++|.++||+|+++.-
T Consensus 3 ~vlVt-Gasg~iG--~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 3 VIAIT-GSASGIG--AALKELLARAGHTVIGIDR 33 (255)
T ss_dssp EEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred EEEEe-CCCcHHH--HHHHHHHHhCCCEEEEEeC
Confidence 45555 4555443 5788999999999998864
No 366
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=25.09 E-value=57 Score=27.37 Aligned_cols=25 Identities=44% Similarity=0.638 Sum_probs=20.0
Q ss_pred CCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 18 PGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 18 ~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|-+ =.++|++|.++|++|+++..+
T Consensus 33 Sg~i--G~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 33 SGKM--GFAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp CSHH--HHHHHHHHHHTTCEEEEEECS
T ss_pred ccHH--HHHHHHHHHHCCCEEEEEECC
Confidence 4544 367899999999999998765
No 367
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=25.02 E-value=87 Score=26.80 Aligned_cols=41 Identities=15% Similarity=0.008 Sum_probs=31.2
Q ss_pred HHHHHHHHHhCCCCCcEEEECCCCc------chHHHHHHcCCCcEEEec
Q 013951 104 QQPFENLFKEKTLKPCCIISDMCFP------WTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 104 ~~~l~~~l~~~~~~pD~vI~D~~~~------~~~~~A~~~giP~v~~~~ 146 (433)
...+.+++++ .+||+||+-.-.. -+..+|+.+|+|.+...+
T Consensus 105 A~~La~~i~~--~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v~ 151 (255)
T 1efv_B 105 ARVLAKLAEK--EKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFAS 151 (255)
T ss_dssp HHHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHh--cCCCEEEEeCcccCCchhhHHHHHHHHhCCCcccceE
Confidence 3455666766 6899999876552 679999999999998643
No 368
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=24.91 E-value=1.3e+02 Score=25.95 Aligned_cols=38 Identities=11% Similarity=-0.081 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCCC-ChH---HHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPG-HLI---PMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~G-H~~---P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++||+++..+... |-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 3588888754322 222 3467999999999999998765
No 369
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=24.88 E-value=51 Score=27.08 Aligned_cols=33 Identities=21% Similarity=0.147 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++|++. |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 465544 5566554 57899999999999998754
No 370
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=24.69 E-value=1.2e+02 Score=25.28 Aligned_cols=46 Identities=11% Similarity=0.039 Sum_probs=31.9
Q ss_pred chhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEE
Q 013951 267 VPECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVW 314 (433)
Q Consensus 267 ~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 314 (433)
.+.+.+|+... +.+++|..|+...........+.++|++.+..++.
T Consensus 21 ~~~l~~~~~~~--~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLNGR--RSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHTTC--CEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhcCC--CeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 45577777643 45999998875444455677788999998875543
No 371
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=24.66 E-value=1.5e+02 Score=27.81 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=36.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhh
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAAR 49 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~ 49 (433)
+..|+++-.++-|-..-+..||..|+++|+.|.++.....+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~a 142 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG 142 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTH
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchh
Confidence 5567777778889999999999999999999999998876543
No 372
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=24.66 E-value=81 Score=23.74 Aligned_cols=41 Identities=20% Similarity=0.173 Sum_probs=26.9
Q ss_pred HHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecchH
Q 013951 107 FENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFSC 149 (433)
Q Consensus 107 l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~~ 149 (433)
..+.+++ .+||+||.|.... .+..+++.+ ++|+|.++....
T Consensus 39 a~~~l~~--~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~ 86 (155)
T 1qkk_A 39 ALAGLSA--DFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGD 86 (155)
T ss_dssp HHHTCCT--TCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGG
T ss_pred HHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 3344555 7899999997654 444444433 689988876544
No 373
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=24.60 E-value=37 Score=31.24 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=26.5
Q ss_pred hhhhcCCCceeeecccchhhHHHHHHc----CC-cEEeccc
Q 013951 352 VLILSHPAVGGFLTHCGWNSSLEGISA----GV-QMLTWPL 387 (433)
Q Consensus 352 ~~lL~~~~~~~~ItHGG~gs~~eal~~----Gv-P~v~~P~ 387 (433)
.++-..+++ +|+-||=||+++|+.. ++ |++.+..
T Consensus 109 ~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 109 QDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 344455677 9999999999998653 67 8999974
No 374
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=24.45 E-value=46 Score=32.11 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=27.3
Q ss_pred HHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 013951 106 PFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIF 144 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~ 144 (433)
.+.+.+++ .+||++|.+. ....+|+++|||++.+
T Consensus 340 el~~~i~~--~~pDL~ig~~---~~~~~a~~~giP~~~i 373 (525)
T 3aek_B 340 EVEKAIEA--AAPELILGTQ---MERNIAKKLGLPCAVI 373 (525)
T ss_dssp HHHHHHHH--HCCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHhh--cCCCEEEecc---hhHHHHHHcCCCEEEe
Confidence 45666777 7999999874 4678899999999874
No 375
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=24.44 E-value=1.1e+02 Score=22.20 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=24.8
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
|+...++.+|+++- .+-.-...|.+.|.+.|++|..+..
T Consensus 1 Ms~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~ 39 (136)
T 3hdv_A 1 MSLVAARPLVLVVD----DNAVNREALILYLKSRGIDAVGADG 39 (136)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHHTTCCEEEESS
T ss_pred CCCCCCCCeEEEEC----CCHHHHHHHHHHHHHcCceEEEeCC
Confidence 55545567888876 4566667788888888998877543
No 376
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=24.43 E-value=45 Score=31.98 Aligned_cols=34 Identities=12% Similarity=0.291 Sum_probs=27.8
Q ss_pred HHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEE
Q 013951 106 PFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIF 144 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~ 144 (433)
++.+.+++ .+||++|.+. ....+|+++|||++.+
T Consensus 363 el~~~i~~--~~pDl~ig~~---~~r~~a~k~gip~~~i 396 (511)
T 2xdq_B 363 VVGDAIAR--VEPAAIFGTQ---MERHVGKRLNIPCGVI 396 (511)
T ss_dssp HHHHHHHH--HCCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHHh--cCCCEEEecc---chHHHHHhcCCCeEec
Confidence 56677777 7999999874 4678899999999875
No 377
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.27 E-value=1.4e+02 Score=24.24 Aligned_cols=35 Identities=9% Similarity=-0.134 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCCCCh----HHHHHHHHHHHHCCCEEEEEE
Q 013951 7 QVHFLLLPYLAPGHL----IPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 7 ~~~il~~~~~~~GH~----~P~l~La~~L~~rGH~Vt~~~ 42 (433)
.++|.+++... +.- .-...|++.|+++||.|..-.
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GG 51 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGG 51 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECC
Confidence 47899998655 443 346778888889999866554
No 378
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=24.10 E-value=96 Score=26.24 Aligned_cols=44 Identities=11% Similarity=-0.010 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCCCcEEEECC---------CCcchHHHHHHcCCCcEEEecc
Q 013951 104 QQPFENLFKEKTLKPCCIISDM---------CFPWTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 104 ~~~l~~~l~~~~~~pD~vI~D~---------~~~~~~~~A~~~giP~v~~~~~ 147 (433)
.+.+.+.+++...+.|++|.|. -......+|+.++.|++.+...
T Consensus 118 ~~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~ 170 (242)
T 3qxc_A 118 TDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHD 170 (242)
T ss_dssp HHHHHHHHHHGGGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcC
No 379
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=24.07 E-value=1.6e+02 Score=23.35 Aligned_cols=53 Identities=13% Similarity=0.055 Sum_probs=39.6
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEECCcchhhhHHHHHHhh
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHG--AIVTIVTTPVNAARFKTVIARAI 58 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~ 58 (433)
|...+|.+++ ++.+++.-+...++.|.+-| |+|.+++....-+++.++.++..
T Consensus 4 m~~~~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~ 58 (169)
T 3trh_A 4 MNKIFVAILM-GSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENAD 58 (169)
T ss_dssp --CCEEEEEE-SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHH
T ss_pred CCCCcEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHH
Confidence 4456788887 89999999999999998864 67888877766666666665543
No 380
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=23.88 E-value=86 Score=27.75 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=24.1
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
+.++|++ + |+.|-+- ..|++.|.++||+|+.+.-
T Consensus 26 ~~~~vlV-t-GatG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 26 DRKRILI-T-GGAGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp -CCEEEE-E-TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEE-E-cCccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 3455554 3 5666554 5788999999999999874
No 381
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=23.87 E-value=1.2e+02 Score=26.03 Aligned_cols=40 Identities=20% Similarity=0.182 Sum_probs=30.8
Q ss_pred CcEEEEEcC--CCCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 7 QVHFLLLPY--LAPGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 7 ~~~il~~~~--~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
+.|+++++. |+-|--.-...||..|+++|..|.++-....
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 344544443 5778888899999999999999999976643
No 382
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=23.82 E-value=23 Score=33.91 Aligned_cols=76 Identities=11% Similarity=-0.022 Sum_probs=50.6
Q ss_pred CeEEeCcccHhh---hhcCCCceeeec---ccchhh-HHHHHHcC---CcEEecccccccchhHHHhhhhcc-ceEEeee
Q 013951 342 GLLIRGWAPQVL---ILSHPAVGGFLT---HCGWNS-SLEGISAG---VQMLTWPLFADQFCNEKLIVNVLR-IGVSVGV 410 (433)
Q Consensus 342 nv~~~~~~pq~~---lL~~~~~~~~It---HGG~gs-~~eal~~G---vP~v~~P~~~DQ~~na~~v~e~~G-~G~~l~~ 410 (433)
.|.+.+.+|+.+ ++..+++ |+. .=|+|- ..|++++| .|+|+--+ -.. . +.+| -|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~----aGa---~-~~l~~~allVnP 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSET----CGA---A-EVLGEYCRSVNP 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETT----BTT---H-HHHGGGSEEECT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCC----CCC---H-HHhCCCEEEECC
Confidence 577777888754 5556777 553 458885 57999996 55554322 122 2 2333 4777776
Q ss_pred eccCCcccccchhhccccc
Q 013951 411 EVDLPITTSNYLCKISCNS 429 (433)
Q Consensus 411 ~~~~~~~l~~ai~~il~~~ 429 (433)
.+.+.++++|.++|+++
T Consensus 423 --~D~~~lA~AI~~aL~m~ 439 (496)
T 3t5t_A 423 --FDLVEQAEAISAALAAG 439 (496)
T ss_dssp --TBHHHHHHHHHHHHHCC
T ss_pred --CCHHHHHHHHHHHHcCC
Confidence 57889999999999875
No 383
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=23.79 E-value=1.4e+02 Score=21.75 Aligned_cols=30 Identities=20% Similarity=0.132 Sum_probs=20.6
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF 137 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~ 137 (433)
...+.+++ .+||+||.|.... .+..+++.+
T Consensus 46 ~al~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l 77 (143)
T 2qv0_A 46 DVLKFLQH--NKVDAIFLDINIPSLDGVLLAQNI 77 (143)
T ss_dssp HHHHHHHH--CCCSEEEECSSCSSSCHHHHHHHH
T ss_pred HHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHH
Confidence 34455666 7899999997654 556666655
No 384
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=23.79 E-value=98 Score=25.70 Aligned_cols=33 Identities=27% Similarity=0.213 Sum_probs=23.9
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|.++++ ++.|-+ =.+++++|.++||+|+++.-.
T Consensus 8 ~~vlVt-Gasggi--G~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 8 KVSLVT-GSTRGI--GRAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp CEEEET-TCSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE-CCCchH--HHHHHHHHHHCCCEEEEEeCC
Confidence 456666 445544 357899999999999988743
No 385
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=23.75 E-value=2.7e+02 Score=23.96 Aligned_cols=62 Identities=13% Similarity=0.120 Sum_probs=42.6
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC---cchhhhHHHHHHhhhC-CCCeEEEEec
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP---VNAARFKTVIARAIKS-GLQIRLIEIQ 70 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~i~ 70 (433)
.|+|+-.+...|-.=+..+|+.|++.|-.|.++... .+.+.++++.+..... +.+-.++.+|
T Consensus 110 IIlf~ds~~~~~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng~~~~~s~~v~v~ 175 (268)
T 4b4t_W 110 IVAFVCSPISDSRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHLLTVT 175 (268)
T ss_dssp EEEEECSCCSSCHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCSSTTTSCEEEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcCCCCCceeEEEeC
Confidence 355555667778888999999999999999999744 4556666766555321 3345566654
No 386
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=23.65 E-value=71 Score=26.74 Aligned_cols=38 Identities=16% Similarity=0.088 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+..++++.++..|+..-+..+++.|.++|+.|..+-..
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 85 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAETS 85 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECCS
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecCC
Confidence 34567777788888888889999999888887766443
No 387
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=23.64 E-value=61 Score=23.71 Aligned_cols=13 Identities=38% Similarity=0.480 Sum_probs=10.1
Q ss_pred HHHHCCCEEEEEE
Q 013951 30 LLAQHGAIVTIVT 42 (433)
Q Consensus 30 ~L~~rGH~Vt~~~ 42 (433)
++.+.|.+|.+++
T Consensus 74 ~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 74 ELLEEGSDVALVT 86 (117)
T ss_dssp HHHHTTCCEEEEE
T ss_pred HHHHCCCeEEEEe
Confidence 3446699999998
No 388
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=23.62 E-value=1.8e+02 Score=24.04 Aligned_cols=33 Identities=27% Similarity=0.313 Sum_probs=24.2
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|+++++.++ |-+ =.++|++|.++|++|.++.-.
T Consensus 6 k~vlITGas-~gI--G~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 6 KVALVTGAS-RGI--GFEVAHALASKGATVVGTATS 38 (247)
T ss_dssp CEEEESSCS-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEeCC
Confidence 567777544 433 358899999999999887643
No 389
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=23.61 E-value=83 Score=27.61 Aligned_cols=30 Identities=13% Similarity=0.201 Sum_probs=26.1
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
+||.|+=.+.+|. ++|+.|.++||+|++.-
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 3899999998884 67999999999999874
No 390
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=23.57 E-value=1e+02 Score=24.19 Aligned_cols=43 Identities=19% Similarity=-0.017 Sum_probs=33.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhH
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFK 51 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 51 (433)
-..++..++.--+.|.+-||..-++-|++|+++.+-.....++
T Consensus 7 l~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~ 49 (160)
T 3pnx_A 7 MNLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLR 49 (160)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGB
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhc
Confidence 3445555677788899999999999999999998875444443
No 391
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=23.57 E-value=1.1e+02 Score=25.55 Aligned_cols=41 Identities=20% Similarity=0.185 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc----CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF----NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~----giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+++.+ ++|++.++...
T Consensus 72 ~al~~~~~--~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~ 118 (249)
T 3q9s_A 72 NGLIKARE--DHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARD 118 (249)
T ss_dssp HHHHHHHH--SCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHhc--CCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCC
Confidence 44455666 7899999998765 445555543 58888876654
No 392
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=23.55 E-value=79 Score=26.85 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=30.7
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+|..-|+-|--.-...||..|+++|++|.++=..
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 566767778899999999999999999999998544
No 393
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=23.47 E-value=99 Score=25.78 Aligned_cols=35 Identities=6% Similarity=0.074 Sum_probs=27.3
Q ss_pred cEEEEEcC-CCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 8 VHFLLLPY-LAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 8 ~~il~~~~-~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
+.|++... +.-|-..-...|++.|+++|++|.++-
T Consensus 5 k~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 5 KKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp EEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred cEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 34444443 456888889999999999999999985
No 394
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=23.44 E-value=44 Score=27.96 Aligned_cols=18 Identities=22% Similarity=0.333 Sum_probs=16.3
Q ss_pred HHHHHHHHHCCCEEEEEE
Q 013951 25 FDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 25 l~La~~L~~rGH~Vt~~~ 42 (433)
+.+|..|+++|++|+++=
T Consensus 15 L~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 15 LSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEE
Confidence 778999999999999984
No 395
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=23.44 E-value=77 Score=24.92 Aligned_cols=27 Identities=30% Similarity=0.129 Sum_probs=21.9
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhC
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEAS 308 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~ 308 (433)
.+|+++||........+...++++.+.
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 699999998876677788878888774
No 396
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=23.41 E-value=46 Score=26.27 Aligned_cols=73 Identities=14% Similarity=-0.061 Sum_probs=42.1
Q ss_pred hhhcCCCceee-ecccchhhHHH---HHHcCCcEEeccccc-ccchhHHHhhhhccceEEeeeeccCCcccccchhhccc
Q 013951 353 LILSHPAVGGF-LTHCGWNSSLE---GISAGVQMLTWPLFA-DQFCNEKLIVNVLRIGVSVGVEVDLPITTSNYLCKISC 427 (433)
Q Consensus 353 ~lL~~~~~~~~-ItHGG~gs~~e---al~~GvP~v~~P~~~-DQ~~na~~v~e~~G~G~~l~~~~~~~~~l~~ai~~il~ 427 (433)
..+..|++-.+ ++.-..|+..| |...|+|++++---. +...|+. +. -....-.+.....+.+.+.+.|.+.++
T Consensus 73 ~~i~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~~-g~~~~~~~~~~~y~~~el~~~l~~~~~ 150 (165)
T 2khz_A 73 NWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-IR-GAADGSRFQVWDYAEGEVETMLDRYFE 150 (165)
T ss_dssp HHHHHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-HH-HTCCSSSEEEEECCTTTHHHHHHHHHH
T ss_pred HHHHhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-hc-ccCccceeEEEecCHHHHHHHHHHHHH
Confidence 34556666222 24557999999 688899999982111 1344555 52 333322233333466777777766654
No 397
>1d1q_A Tyrosine phosphatase (E.C.3.1.3.48); beta-alpha-beta, hydrolase; HET: 4NP; 1.70A {Saccharomyces cerevisiae} SCOP: c.44.1.1 PDB: 1d2a_A* 1d1p_A*
Probab=23.38 E-value=1.2e+02 Score=23.66 Aligned_cols=35 Identities=9% Similarity=-0.052 Sum_probs=22.5
Q ss_pred CCCCCCCcEEEEEcCCCCCChHHHHHHHHHHHH-CC
Q 013951 1 MASEASQVHFLLLPYLAPGHLIPMFDIARLLAQ-HG 35 (433)
Q Consensus 1 m~~~~~~~~il~~~~~~~GH~~P~l~La~~L~~-rG 35 (433)
|+-.++++||||+|.+=..--.-.-+|.+.+.. +|
T Consensus 1 ~~~~~~~~~VLFVCtgN~cRSpmAEal~~~~~~~~g 36 (161)
T 1d1q_A 1 MTIEKPKISVAFIALGNFCRSPMAEAIFKHEVEKAN 36 (161)
T ss_dssp --CCSCCEEEEEEESSSSSHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCEEEEEcCCcHHHHHHHHHHHHHHHHHcC
Confidence 666677889999997755544445566666654 45
No 398
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=23.36 E-value=1e+02 Score=27.19 Aligned_cols=34 Identities=9% Similarity=0.118 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHC-C-CEEEEEECC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQH-G-AIVTIVTTP 44 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~r-G-H~Vt~~~~~ 44 (433)
|++++|+++..+.. ..|++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 45679999865554 4789999876 7 888888654
No 399
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=23.35 E-value=80 Score=26.51 Aligned_cols=32 Identities=6% Similarity=0.095 Sum_probs=23.0
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
|.++++.. .|-+ =.++|++|+++|++|.++.-
T Consensus 2 k~vlVTGa-s~gI--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 2 SIIVISGC-ATGI--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CEEEEETT-TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCC-CCHH--HHHHHHHHHHCCCEEEEEeC
Confidence 45666644 4433 36789999999999988763
No 400
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=23.34 E-value=88 Score=25.59 Aligned_cols=33 Identities=6% Similarity=0.045 Sum_probs=27.2
Q ss_pred EEEEcC-CCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 10 FLLLPY-LAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 10 il~~~~-~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
|++... ++-|--.-...||..|+++|++|.++=
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 444443 688999999999999999999999863
No 401
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=23.31 E-value=1.2e+02 Score=26.72 Aligned_cols=50 Identities=8% Similarity=-0.094 Sum_probs=29.8
Q ss_pred hhhhhhhccCCCCeEEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeC
Q 013951 268 PECLTWLDSQQPSSVVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRG 318 (433)
Q Consensus 268 ~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 318 (433)
+++..+++.+- +++-+-..+.....+...+..+.+.+++.+..+++-.+.
T Consensus 131 ~el~~~~~~g~-~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 131 KEASRAVAAGH-LGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHTC-CCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHcCC-eEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 56666663322 233222222122345677899999999999988776654
No 402
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=23.26 E-value=54 Score=29.24 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCCCcEEEECCCCcchHHHHHHcCCCcEEEec
Q 013951 106 PFENLFKEKTLKPCCIISDMCFPWTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~~~~~~A~~~giP~v~~~~ 146 (433)
.++.+++ .+||+||..........--++.|||++.+..
T Consensus 108 n~E~i~a---l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 108 NTEACVA---ATPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CHHHHHH---TCCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CHHHHHh---cCCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 4455544 6999999875422233344577999998753
No 403
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=23.08 E-value=2.3e+02 Score=27.48 Aligned_cols=29 Identities=17% Similarity=0.300 Sum_probs=23.8
Q ss_pred cCCCceeeecccchh------hHHHHHHcCCcEEecc
Q 013951 356 SHPAVGGFLTHCGWN------SSLEGISAGVQMLTWP 386 (433)
Q Consensus 356 ~~~~~~~~ItHGG~g------s~~eal~~GvP~v~~P 386 (433)
.++.+ ++++.|-| .+.||-+.++|+|++.
T Consensus 73 G~pgv--~~~TsGpG~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 73 KRPVV--LLCTSGTAAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp CCCEE--EEECSSHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCCEE--EEECCchhhhhhhHHHHHHHhcCCCeEEEe
Confidence 34555 89999966 7789999999999985
No 404
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=23.08 E-value=81 Score=24.77 Aligned_cols=27 Identities=30% Similarity=0.338 Sum_probs=22.0
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhC
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEAS 308 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~ 308 (433)
.+|+++||......+.+...++.++..
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~ 29 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQL 29 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTS
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhC
Confidence 589999999876777788888888775
No 405
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=22.94 E-value=88 Score=26.71 Aligned_cols=40 Identities=13% Similarity=-0.046 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCCCCcEEEECCCCc------chHHHHHHcCCCcEEEec
Q 013951 105 QPFENLFKEKTLKPCCIISDMCFP------WTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 105 ~~l~~~l~~~~~~pD~vI~D~~~~------~~~~~A~~~giP~v~~~~ 146 (433)
..+.+++++ .+||+||+-.-.. -+..+|+++|+|.+...+
T Consensus 103 ~~La~~i~~--~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 103 KILAAVARA--EGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHH--HTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHh--cCCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 455566666 6899999876542 679999999999998643
No 406
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=22.92 E-value=3.4e+02 Score=22.85 Aligned_cols=33 Identities=24% Similarity=0.104 Sum_probs=24.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++.++. -+ =.++|++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~-gI--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASR-GI--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSS-HH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCC-HH--HHHHHHHHHHCCCEEEEEeC
Confidence 46788885554 33 35789999999999988765
No 407
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=22.92 E-value=1.3e+02 Score=24.84 Aligned_cols=33 Identities=21% Similarity=0.120 Sum_probs=23.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+.++++ ++.|-+ =.+++++|.++|++|.++.-.
T Consensus 8 k~vlIT-Gasggi--G~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 8 RRVLVT-GAGKGI--GRGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp CEEEEE-STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEE-CCCcHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 455566 444444 467889999999999887643
No 408
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=22.87 E-value=63 Score=22.96 Aligned_cols=33 Identities=24% Similarity=0.192 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCC-CEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHG-AIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rG-H~Vt~~~~~ 44 (433)
.++|+++ |+ |.+- ..+++.|.++| |+|+++...
T Consensus 5 ~~~v~I~--G~-G~iG--~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVV--GA-GKIG--QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEE--CC-SHHH--HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEE--CC-CHHH--HHHHHHHHhCCCceEEEEeCC
Confidence 3577776 44 5443 56889999999 999888754
No 409
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=22.85 E-value=77 Score=27.57 Aligned_cols=37 Identities=5% Similarity=-0.045 Sum_probs=27.5
Q ss_pred cEEEEEcCCCCCC---hHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGH---LIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH---~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 4799998764221 234567999999999999998764
No 410
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=22.82 E-value=74 Score=28.12 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc-chHHHHHHcCCCcEEEec
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP-WTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~-~~~~~A~~~giP~v~~~~ 146 (433)
.++++++ .+||+||...... ....--++.|||++.+..
T Consensus 76 n~E~i~~---l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 76 NIESLLA---LKPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp CHHHHHH---TCCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred CHHHHHc---cCCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 4455554 6999999875432 233444677999998743
No 411
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.81 E-value=1.7e+02 Score=24.30 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=24.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++..+ |-+ =.++|++|.++|++|.++.-
T Consensus 9 ~k~vlITGas-~gi--G~~~a~~l~~~G~~V~~~~r 41 (253)
T 3qiv_A 9 NKVGIVTGSG-GGI--GQAYAEALAREGAAVVVADI 41 (253)
T ss_dssp TCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-ChH--HHHHHHHHHHCCCEEEEEcC
Confidence 3677777444 434 36889999999999988764
No 412
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=22.81 E-value=78 Score=26.83 Aligned_cols=35 Identities=26% Similarity=0.168 Sum_probs=25.5
Q ss_pred cEEEEEcCCCC-CChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAP-GHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~-GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|.++++..+. |-+- .++|+.|.++|++|.++.-.
T Consensus 8 ~k~vlVTGas~~~gIG--~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLG--FAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp TCEEEEESCCSSSSHH--HHHHHHHHHHTCEEEEEESC
T ss_pred CCEEEEECCCCCCcHH--HHHHHHHHHCCCEEEEEcCC
Confidence 35677775542 5554 57899999999999988644
No 413
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=22.68 E-value=1.3e+02 Score=24.98 Aligned_cols=37 Identities=8% Similarity=-0.028 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCCCC----hHHHHHHHHHHHHCCCEEEEEEC
Q 013951 7 QVHFLLLPYLAPGH----LIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 7 ~~~il~~~~~~~GH----~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.++|.+++....+. ..-...|++.|+++|+.|..-..
T Consensus 9 m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 9 FRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp CSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 34699997665543 34578888888999998755444
No 414
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=22.64 E-value=3.6e+02 Score=23.23 Aligned_cols=39 Identities=10% Similarity=0.046 Sum_probs=31.9
Q ss_pred HHHHHHHHHhCCCCCcEEEECCCCc--chHHHHHHcCCCcEEE
Q 013951 104 QQPFENLFKEKTLKPCCIISDMCFP--WTVDTAAKFNVPRIIF 144 (433)
Q Consensus 104 ~~~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~giP~v~~ 144 (433)
...+.+.+++ .+..+|+++..+. .+..+|+..|++++.+
T Consensus 217 l~~l~~~ik~--~~v~~if~e~~~~~~~~~~la~~~g~~v~~l 257 (286)
T 3gi1_A 217 LKEIQDFVKE--YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTL 257 (286)
T ss_dssp HHHHHHHHHH--TTCCEEEECTTSCTHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHhCCeEEEe
Confidence 3466777888 8999999998765 5678899999998875
No 415
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=22.56 E-value=70 Score=23.23 Aligned_cols=38 Identities=21% Similarity=0.230 Sum_probs=24.2
Q ss_pred HHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 109 NLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 109 ~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
+.+++ .+||+||.|.... .+..+++.+ ++|++.++...
T Consensus 40 ~~~~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 84 (134)
T 3f6c_A 40 QRVET--LKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKN 84 (134)
T ss_dssp HHHHH--HCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC-
T ss_pred HHHHh--cCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCC
Confidence 34455 6899999998654 455555543 57877765543
No 416
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=22.54 E-value=67 Score=27.11 Aligned_cols=37 Identities=14% Similarity=0.172 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHcCCCcEEEe
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKFNVPRIIFH 145 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~giP~v~~~ 145 (433)
.++++++ .+||+||...... ....--++.|||++.+.
T Consensus 51 n~E~i~~---l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 51 NAEGILA---MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CHHHHHT---TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHc---cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 4455554 6999999887543 23344467899999874
No 417
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=22.53 E-value=1.8e+02 Score=23.18 Aligned_cols=38 Identities=11% Similarity=-0.029 Sum_probs=30.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
++||+|+.+++..-. -+....+.|.+.|++|++++...
T Consensus 23 ~~kV~ill~~g~~~~-e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFEDS-EFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBCTH-HHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEEECCCCCHH-HHHHHHHHHHHCCCEEEEEECCC
Confidence 568999988766543 36677888999999999999774
No 418
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=22.53 E-value=77 Score=27.19 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=32.4
Q ss_pred CcEEEEEcCC---CCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 7 QVHFLLLPYL---APGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 7 ~~~il~~~~~---~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
++|..|++.+ +.|-=.-.-.|+..|.+||++|+..-..++
T Consensus 22 ~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPY 64 (294)
T 2c5m_A 22 SMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (294)
T ss_dssp CCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECB
T ss_pred ceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCc
Confidence 4689999987 456667789999999999999999865543
No 419
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=22.49 E-value=1.2e+02 Score=27.13 Aligned_cols=36 Identities=14% Similarity=0.098 Sum_probs=25.1
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHH--CCCEEEEEECC
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQ--HGAIVTIVTTP 44 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~--rGH~Vt~~~~~ 44 (433)
++.++|++. |+.|-+- ..|+++|.+ +||+|+.+.-.
T Consensus 8 ~~~~~vlVT--GatG~IG--~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILIT--GGAGFVG--SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CTTCEEEEE--TTTSHHH--HHHHHHHHHHCTTSEEEEEECC
T ss_pred cCCCEEEEE--CCCCHHH--HHHHHHHHhhCCCCeEEEEECC
Confidence 444555544 5556554 578899999 99999999753
No 420
>2ffj_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.45A {Archaeoglobus fulgidus} SCOP: e.50.1.1
Probab=22.47 E-value=98 Score=27.21 Aligned_cols=34 Identities=12% Similarity=-0.009 Sum_probs=28.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
++|++++=-+. -+..=+-|++.|.++|++|++.+
T Consensus 165 ~~v~~v~DNaG-Eiv~Dlll~~~Ll~~g~~V~~~v 198 (300)
T 2ffj_A 165 GKVVYLTDNAG-EIFFDTLLMKEIKRRCEKLTAVV 198 (300)
T ss_dssp SEEEEECCBTT-HHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCEEEEecCCc-cHHHHHHHHHHHHHcCCeEEEEE
Confidence 58899987777 66666669999999999999986
No 421
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=22.43 E-value=85 Score=27.64 Aligned_cols=33 Identities=21% Similarity=0.066 Sum_probs=23.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++|+ ++ |+.|.+- ..|+++|.++||+|+.+.-.
T Consensus 4 ~~vl-Vt-GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 4 KRAL-IT-GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CEEE-EE-TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CEEE-EE-CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 3444 44 5666554 57899999999999988643
No 422
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=22.43 E-value=2.3e+02 Score=23.94 Aligned_cols=34 Identities=21% Similarity=0.105 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
..|+++++.++. -+ =.++|++|+++|++|.+...
T Consensus 26 ~~k~~lVTGas~-GI--G~aia~~la~~G~~Vv~~~~ 59 (267)
T 3u5t_A 26 TNKVAIVTGASR-GI--GAAIAARLASDGFTVVINYA 59 (267)
T ss_dssp -CCEEEEESCSS-HH--HHHHHHHHHHHTCEEEEEES
T ss_pred CCCEEEEeCCCC-HH--HHHHHHHHHHCCCEEEEEcC
Confidence 346788885544 33 36889999999999988754
No 423
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=22.42 E-value=93 Score=23.03 Aligned_cols=42 Identities=19% Similarity=0.246 Sum_probs=26.8
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHH-------cCCCcEEEecchH
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAK-------FNVPRIIFHGFSC 149 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~-------~giP~v~~~~~~~ 149 (433)
...+.+++ .+||+||.|.... .+..+++. .++|+|.++....
T Consensus 43 ~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~ 93 (147)
T 2zay_A 43 EAVPVAVK--THPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRAT 93 (147)
T ss_dssp HHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCC
T ss_pred HHHHHHHc--CCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCC
Confidence 34455556 6899999997554 44444443 3588888766543
No 424
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=22.32 E-value=97 Score=26.73 Aligned_cols=38 Identities=18% Similarity=0.103 Sum_probs=31.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+.|+|..-|+-|--.-...||..|+++|++|.++=...
T Consensus 3 kvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D~ 40 (289)
T 2afh_E 3 RQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDP 40 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred eEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 35667667788999999999999999999999985443
No 425
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=22.30 E-value=1.6e+02 Score=21.46 Aligned_cols=38 Identities=5% Similarity=-0.057 Sum_probs=28.2
Q ss_pred EEEEcCCCCCCh--HHHHHHHHHHHHCCCEEEEEECCcch
Q 013951 10 FLLLPYLAPGHL--IPMFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 10 il~~~~~~~GH~--~P~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
+.++..+-+|+. .-.+.+|..+.+.||+|.++-.....
T Consensus 5 ~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DGV 44 (119)
T 2d1p_B 5 AFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV 44 (119)
T ss_dssp EEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGGG
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHHH
Confidence 445555566766 55788999999999999999877443
No 426
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=22.28 E-value=1.1e+02 Score=27.52 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=52.2
Q ss_pred CChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhcCCCceeeecccchhhH
Q 013951 293 LPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILSHPAVGGFLTHCGWNSS 372 (433)
Q Consensus 293 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~~~~~~~~ItHGG~gs~ 372 (433)
.+.+....+.+++.+...+.||...++... .++.+++++..+-++|.. ||-+.-...+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~--------------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL 120 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGMNS--------------------NSLLPYIDYDAFQNNPKI--MIGYSDATAL 120 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCSCG--------------------GGGGGGSCHHHHHHSCCE--EEECGGGHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccccH--------------------HHHhhhcChhHHhhCCeE--EEEechHHHH
Confidence 345667789999999999999988776432 123355666666567777 8888888777
Q ss_pred HHHHH--cCCcEEeccc
Q 013951 373 LEGIS--AGVQMLTWPL 387 (433)
Q Consensus 373 ~eal~--~GvP~v~~P~ 387 (433)
+-+++ .|+..+-=|.
T Consensus 121 ~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 121 LLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHHHHCCCEEECCC
T ss_pred HHHHHHhcCceEEECCh
Confidence 77876 5888777775
No 427
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=22.21 E-value=3.8e+02 Score=23.28 Aligned_cols=32 Identities=9% Similarity=0.079 Sum_probs=21.0
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEE
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHG--AIVTIVT 42 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rG--H~Vt~~~ 42 (433)
.++|+ ++ |+.|.+- ..|+++|.++| |+|+.+.
T Consensus 24 ~~~vl-Vt-GatG~iG--~~l~~~L~~~g~~~~v~~~~ 57 (346)
T 4egb_A 24 AMNIL-VT-GGAGFIG--SNFVHYMLQSYETYKIINFD 57 (346)
T ss_dssp CEEEE-EE-TTTSHHH--HHHHHHHHHHCTTEEEEEEE
T ss_pred CCeEE-EE-CCccHHH--HHHHHHHHhhCCCcEEEEEe
Confidence 34544 44 6667664 57899999999 5555554
No 428
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.10 E-value=1.3e+02 Score=26.56 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=53.8
Q ss_pred CCChhhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHhCCCCeEEeCcccHhhhhc-CCCceeeecccchh
Q 013951 292 NLPSSQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERIKGRGLLIRGWAPQVLILS-HPAVGGFLTHCGWN 370 (433)
Q Consensus 292 ~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~nv~~~~~~pq~~lL~-~~~~~~~ItHGG~g 370 (433)
..+.+..+.+.+++.+...+.||...++... ..+.++++...+-. +|.. ||-+.-..
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga--------------------~rlLp~LD~~~i~~a~PK~--~iGySDiT 120 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGYGC--------------------GQLLPGLDWGRLQAASPRP--LIGFSDIS 120 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSSCG--------------------GGGTTTCCHHHHHHSCCCC--EEECGGGH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCcCH--------------------HHHhhccchhhhhccCCCE--EEEEchhH
Confidence 3456667788999999999999988776432 13345666666665 7777 88888888
Q ss_pred hHHHHHH-cCCcEEecccc
Q 013951 371 SSLEGIS-AGVQMLTWPLF 388 (433)
Q Consensus 371 s~~eal~-~GvP~v~~P~~ 388 (433)
.++-+++ .|++.+-=|..
T Consensus 121 aL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 121 VLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHHHTTCCEEECCCG
T ss_pred HHHHHHHHcCCcEEECHhh
Confidence 8888876 47777776654
No 429
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=22.03 E-value=2.3e+02 Score=24.98 Aligned_cols=31 Identities=23% Similarity=0.148 Sum_probs=23.4
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
|+++++..+.| + =.++|++|.++|++|....
T Consensus 6 k~vlVTGas~G-I--G~aia~~L~~~G~~V~~~~ 36 (324)
T 3u9l_A 6 KIILITGASSG-F--GRLTAEALAGAGHRVYASM 36 (324)
T ss_dssp CEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcH-H--HHHHHHHHHHCCCEEEEec
Confidence 57788855543 3 3589999999999998765
No 430
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=21.99 E-value=61 Score=26.60 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..++|.|+=.+..| ..+|+.|.++||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcCC
Confidence 35678888655555 56788999999999988543
No 431
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=21.96 E-value=53 Score=29.50 Aligned_cols=39 Identities=8% Similarity=-0.097 Sum_probs=29.1
Q ss_pred CCcEEEEEcCCCCCC----hHHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGH----LIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH----~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+++||+++..+..+- +.-...++++|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~ 44 (346)
T 3se7_A 2 SHMKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGIT 44 (346)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEEC
Confidence 467899988544432 456777888888889999999755
No 432
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=21.92 E-value=1.6e+02 Score=21.01 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=28.6
Q ss_pred EEEEeeCCCcCCChhhHHHHHHHHHhCCCCEEEEEeCCc
Q 013951 282 VVYVCLGSICNLPSSQLIELGLGLEASNKPFVWVIRGVS 320 (433)
Q Consensus 282 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~ 320 (433)
-|||-|.| +++.+.++++.++..+++++..++...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdqd 37 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQD 37 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCch
Confidence 46666654 578899999999999999999998764
No 433
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=21.77 E-value=1.5e+02 Score=23.39 Aligned_cols=38 Identities=8% Similarity=-0.091 Sum_probs=25.6
Q ss_pred CcEEEEEcCC-----CCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYL-----APGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~-----~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+..++++..+ +...-.-...+++.|.++|+.|..+-.+
T Consensus 30 ~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 72 (208)
T 3trd_A 30 KSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFR 72 (208)
T ss_dssp CSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecC
Confidence 3455555555 4444445678999999999988776544
No 434
>1ulz_A Pyruvate carboxylase N-terminal domain; biotin carboxylase; 2.20A {Aquifex aeolicus} SCOP: b.84.2.1 c.30.1.1 d.142.1.2
Probab=21.69 E-value=2e+02 Score=26.67 Aligned_cols=33 Identities=18% Similarity=0.127 Sum_probs=24.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+||+++-. | .-...+++++++.|++|.++.+..
T Consensus 3 k~ilI~g~---g--~~~~~~~~a~~~~G~~vv~v~~~~ 35 (451)
T 1ulz_A 3 NKVLVANR---G--EIAVRIIRACKELGIPTVAIYNEV 35 (451)
T ss_dssp SSEEECCC---H--HHHHHHHHHHHHHTCCEEEEECGG
T ss_pred ceEEEECC---c--HHHHHHHHHHHHcCCeEEEEechh
Confidence 36777642 3 346789999999999999987643
No 435
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=21.62 E-value=3.8e+02 Score=23.21 Aligned_cols=110 Identities=10% Similarity=0.027 Sum_probs=0.0
Q ss_pred CCCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcch-hhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCC
Q 013951 4 EASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA-ARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGC 82 (433)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 82 (433)
..+++||+++.++. || -+.+|.+.-.+....+.++.--+++ ..+++..+.. ++.+..++.....
T Consensus 86 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~-----gIp~~~~~~~~~~------- 150 (288)
T 3obi_A 86 RETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFG-----DIPFYHFPVNKDT------- 150 (288)
T ss_dssp TTSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTT-----TCCEEECCCCTTT-------
T ss_pred cCCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHc-----CCCEEEeCCCccc-------
Q ss_pred CCCCCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCCCc-chHHHHHHcCCCcEEEecc
Q 013951 83 ENCDLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMCFP-WTVDTAAKFNVPRIIFHGF 147 (433)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~~~-~~~~~A~~~giP~v~~~~~ 147 (433)
-....+.+.+.+++ .++|+||.=.+.. -...+.+.+.-.++-++++
T Consensus 151 -----------------r~~~~~~~~~~l~~--~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 151 -----------------RRQQEAAITALIAQ--THTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp -----------------HHHHHHHHHHHHHH--HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -----------------HHHHHHHHHHHHHh--cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
No 436
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=21.58 E-value=59 Score=28.03 Aligned_cols=31 Identities=19% Similarity=-0.012 Sum_probs=23.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
||+|+=.|..| ..+|..|.++||+|+++...
T Consensus 2 ~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 67777655555 36799999999999998644
No 437
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=21.58 E-value=1e+02 Score=26.42 Aligned_cols=33 Identities=15% Similarity=0.021 Sum_probs=24.3
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|+++++.++ |-+- .++|++|.++|++|.++.-.
T Consensus 6 k~vlVTGas-~gIG--~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 6 KVWLVTGAS-SGFG--RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CEEEETTTT-SHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEECCC-ChHH--HHHHHHHHHCCCEEEEEeCC
Confidence 577777444 4443 57899999999999887643
No 438
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=21.55 E-value=94 Score=25.81 Aligned_cols=37 Identities=22% Similarity=0.055 Sum_probs=28.8
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
...+++..+..|+..-+..+++.|.++|+.|..+-.+
T Consensus 40 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 76 (270)
T 3rm3_A 40 PVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLK 76 (270)
T ss_dssp SEEEEEECCTTCCGGGTHHHHHHHHHTTCEEEECCCT
T ss_pred CeEEEEECCCCCChhHHHHHHHHHHHCCCEEEEeCCC
Confidence 3566666788888888889999999999988766544
No 439
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=21.51 E-value=60 Score=27.52 Aligned_cols=38 Identities=18% Similarity=0.150 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc-chHHHHHHcCCCcEEEec
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP-WTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~-~~~~~A~~~giP~v~~~~ 146 (433)
.++.+++ .+||+||...... .....-++.|||++.+..
T Consensus 52 n~E~i~~---l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 52 NVEAVKK---LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CHHHHHH---TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CHHHHHh---cCCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 3455544 6999999864321 223445677999988753
No 440
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=21.51 E-value=69 Score=27.44 Aligned_cols=34 Identities=24% Similarity=0.166 Sum_probs=24.9
Q ss_pred hCCCCCcEEE-ECCCCc-chHHHHHHcCCCcEEEec
Q 013951 113 EKTLKPCCII-SDMCFP-WTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 113 ~~~~~pD~vI-~D~~~~-~~~~~A~~~giP~v~~~~ 146 (433)
++...||+|| .|+..- -+..=|.++|||+|.+.-
T Consensus 154 ~m~~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivD 189 (256)
T 2vqe_B 154 LLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALAD 189 (256)
T ss_dssp GCSSCCSEEEESCTTTTHHHHHHHHHTTCCCEECCC
T ss_pred ccccCCCEEEEeCCccchHHHHHHHHcCCCEEEEec
Confidence 3346899877 566443 678889999999998643
No 441
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=21.42 E-value=1.1e+02 Score=26.69 Aligned_cols=26 Identities=23% Similarity=0.399 Sum_probs=18.4
Q ss_pred CchhhhhhhccCCCCeEEEEeeCCCcC
Q 013951 266 DVPECLTWLDSQQPSSVVYVCLGSICN 292 (433)
Q Consensus 266 ~~~~l~~~l~~~~~~~~v~vs~Gs~~~ 292 (433)
.|++..+|.+.-+-. .+=|++||...
T Consensus 160 ~Peea~~Fv~~TgvD-~LAvaiGt~HG 185 (288)
T 3q94_A 160 DPAECKHLVEATGID-CLAPALGSVHG 185 (288)
T ss_dssp CHHHHHHHHHHHCCS-EEEECSSCBSS
T ss_pred CHHHHHHHHHHHCCC-EEEEEcCcccC
Confidence 477888888644433 56689998765
No 442
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=21.40 E-value=1.3e+02 Score=21.64 Aligned_cols=37 Identities=16% Similarity=0.283 Sum_probs=23.7
Q ss_pred HHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecc
Q 013951 109 NLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGF 147 (433)
Q Consensus 109 ~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~ 147 (433)
+.+++ .+||+||.|.... .+..+++.+ .+|.+.++..
T Consensus 41 ~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (136)
T 1mvo_A 41 KKAET--EKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAK 84 (136)
T ss_dssp HHHHH--HCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred HHHhh--cCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECC
Confidence 34455 6899999997654 445454433 5787776543
No 443
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=21.33 E-value=2e+02 Score=22.99 Aligned_cols=53 Identities=11% Similarity=0.003 Sum_probs=41.1
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEECCcchhhhHHHHHHhhhCCC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHG--AIVTIVTTPVNAARFKTVIARAIKSGL 62 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~ 62 (433)
.|.++. ++.+++.-+...++.|.+-| |++.+++.-..-+++.++..+....+.
T Consensus 24 ~V~Iim-GS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~ 78 (181)
T 4b4k_A 24 LVGVIM-GSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGL 78 (181)
T ss_dssp SEEEEE-SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTC
T ss_pred cEEEEE-CCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCc
Confidence 477776 99999999999999999876 788888888777777777666544443
No 444
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=21.31 E-value=32 Score=28.11 Aligned_cols=29 Identities=0% Similarity=0.030 Sum_probs=24.6
Q ss_pred CCceeeecccchhhHHHHHHcCCcEEeccccc
Q 013951 358 PAVGGFLTHCGWNSSLEGISAGVQMLTWPLFA 389 (433)
Q Consensus 358 ~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~ 389 (433)
+++ +|+.||........ .++|+|-++..+
T Consensus 52 ~dV--IISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 52 VDA--IISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 455 99999999999875 689999999864
No 445
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=21.31 E-value=89 Score=25.28 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=23.2
Q ss_pred CCCcEEEECCCCc--chHHHHHH---------cCCCcEEEecch
Q 013951 116 LKPCCIISDMCFP--WTVDTAAK---------FNVPRIIFHGFS 148 (433)
Q Consensus 116 ~~pD~vI~D~~~~--~~~~~A~~---------~giP~v~~~~~~ 148 (433)
.+||+||.|.... .+..+++. ..+|+|.++...
T Consensus 118 ~~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~ 161 (206)
T 3mm4_A 118 LPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHD 161 (206)
T ss_dssp CSCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCC
Confidence 3899999998655 45555443 358998887654
No 446
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=21.27 E-value=2e+02 Score=23.56 Aligned_cols=38 Identities=11% Similarity=-0.037 Sum_probs=28.3
Q ss_pred cEEEEEcCC---------CCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 8 VHFLLLPYL---------APGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~~~---------~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
+||+|+... ..-...=+....+.|.++|++|+++++..
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 578888762 23334557778888999999999999763
No 447
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=21.20 E-value=86 Score=22.69 Aligned_cols=38 Identities=11% Similarity=-0.096 Sum_probs=23.9
Q ss_pred CCCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEE
Q 013951 5 ASQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 5 ~~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
.+.+||+++|..+.|--.=...+=++..++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 45678999998876544434444444455687777754
No 448
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=21.16 E-value=1.8e+02 Score=27.93 Aligned_cols=28 Identities=21% Similarity=0.227 Sum_probs=23.3
Q ss_pred CCCceeeecccchh------hHHHHHHcCCcEEecc
Q 013951 357 HPAVGGFLTHCGWN------SSLEGISAGVQMLTWP 386 (433)
Q Consensus 357 ~~~~~~~ItHGG~g------s~~eal~~GvP~v~~P 386 (433)
.+.+ +++|.|-| .+.||-+.++|+|++.
T Consensus 66 ~~~v--~~~TsGpG~~N~~~gi~~A~~~~vPvl~it 99 (549)
T 3eya_A 66 ELAV--CAGSCGPGNLHLINGLFDCHRNHVPVLAIA 99 (549)
T ss_dssp SCEE--EEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCEE--EEeCCCCcHhhhHHHHHHHHhhCCCEEEEe
Confidence 4455 88898865 7889999999999985
No 449
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=21.15 E-value=2.3e+02 Score=27.28 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=23.4
Q ss_pred CCCceeeecccchh------hHHHHHHcCCcEEecc
Q 013951 357 HPAVGGFLTHCGWN------SSLEGISAGVQMLTWP 386 (433)
Q Consensus 357 ~~~~~~~ItHGG~g------s~~eal~~GvP~v~~P 386 (433)
++.+ ++++.|-| .+.||-+.++|+|++-
T Consensus 71 ~pgv--~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 71 QPVA--VIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp SCEE--EEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CCEE--EEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 4555 89999966 7889999999999985
No 450
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=21.15 E-value=2.1e+02 Score=21.99 Aligned_cols=38 Identities=13% Similarity=0.016 Sum_probs=30.0
Q ss_pred cEEEEEcCCCCCChHHHH-HHHHHHHHCCCEEEEEECCc
Q 013951 8 VHFLLLPYLAPGHLIPMF-DIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l-~La~~L~~rGH~Vt~~~~~~ 45 (433)
.+|+++-+..+|+..-+. .|++.|.+.|++|.++....
T Consensus 5 ~kv~IvY~S~~GnT~~iA~~ia~~l~~~g~~v~~~~~~~ 43 (159)
T 3fni_A 5 TSIGVFYVSEYGYSDRLAQAIINGITKTGVGVDVVDLGA 43 (159)
T ss_dssp CEEEEEECTTSTTHHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHHCCCeEEEEECcC
Confidence 477777777789998754 57888989999999887653
No 451
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=21.15 E-value=1.4e+02 Score=26.51 Aligned_cols=41 Identities=12% Similarity=0.062 Sum_probs=34.3
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
....|++.+.+..+|..|...++.+..++|.+|........
T Consensus 81 ~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~l 121 (325)
T 3ing_A 81 EAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTANKSGL 121 (325)
T ss_dssp SCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEECCCHHH
T ss_pred CCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEcCchhH
Confidence 34568999999999999999999999999999988755433
No 452
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=21.01 E-value=55 Score=27.75 Aligned_cols=39 Identities=21% Similarity=0.179 Sum_probs=29.7
Q ss_pred cEEEEE-cCCCCCChHHHHHHHHHHHHCCCEEEEEECCcc
Q 013951 8 VHFLLL-PYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVN 46 (433)
Q Consensus 8 ~~il~~-~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~ 46 (433)
+.|+|+ +-|+-|--.-...||..|+++|++|.++=....
T Consensus 7 ~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~ 46 (257)
T 1wcv_1 7 RRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ 46 (257)
T ss_dssp CEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 344444 345667778899999999999999999976644
No 453
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=20.99 E-value=94 Score=26.43 Aligned_cols=33 Identities=15% Similarity=0.114 Sum_probs=23.8
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
|.++++. +.|-+ =.++|+.|+++|++|.++.-.
T Consensus 9 k~vlVTG-as~gI--G~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 9 KVVIVTG-ASMGI--GRAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp CEEEEES-CSSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeC-CCCHH--HHHHHHHHHHCCCEEEEEecC
Confidence 5667774 44444 367899999999999987643
No 454
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=20.95 E-value=2e+02 Score=24.55 Aligned_cols=34 Identities=18% Similarity=0.088 Sum_probs=24.9
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++.++ |-+ =.++|+.|+++|++|.++.-.
T Consensus 32 gk~~lVTGas-~GI--G~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 32 GKRALITGAS-TGI--GKKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp TCEEEEESTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCC-CHH--HHHHHHHHHHCCCEEEEEeCC
Confidence 3677777554 433 358899999999999988743
No 455
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=20.95 E-value=1.2e+02 Score=25.31 Aligned_cols=41 Identities=15% Similarity=0.284 Sum_probs=28.0
Q ss_pred HHHHHHHhCCCCCcEEEECCCCc--chHHHHHHc-----CCCcEEEecch
Q 013951 106 PFENLFKEKTLKPCCIISDMCFP--WTVDTAAKF-----NVPRIIFHGFS 148 (433)
Q Consensus 106 ~l~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~~-----giP~v~~~~~~ 148 (433)
...+.+++ .+||+||.|.... .+..+++.+ ++|++.++...
T Consensus 58 ~al~~~~~--~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~ 105 (250)
T 3r0j_A 58 QALDRARE--TRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARD 105 (250)
T ss_dssp HHHHHHHH--HCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECST
T ss_pred HHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 44455566 6899999998665 455555543 58988877654
No 456
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=20.95 E-value=1.4e+02 Score=28.18 Aligned_cols=38 Identities=11% Similarity=0.064 Sum_probs=31.4
Q ss_pred CcEEEEEcCCCCCC--hHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGH--LIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH--~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
...++++++|+.+. ..-+..+++.|.+.|++|.|++..
T Consensus 294 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 333 (482)
T 2pq6_A 294 PGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRP 333 (482)
T ss_dssp TTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 45799999999884 344888999999999999998865
No 457
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=20.94 E-value=1.8e+02 Score=23.73 Aligned_cols=35 Identities=11% Similarity=-0.050 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCCCC----hHHHHHHHHHHHHCCCEEEEEE
Q 013951 7 QVHFLLLPYLAPGH----LIPMFDIARLLAQHGAIVTIVT 42 (433)
Q Consensus 7 ~~~il~~~~~~~GH----~~P~l~La~~L~~rGH~Vt~~~ 42 (433)
.++|.+++... +. ..-...|++.|+++|+.|..-.
T Consensus 22 ~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GG 60 (199)
T 3qua_A 22 QWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGG 60 (199)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECC
Confidence 46899998555 43 3445788889999999875543
No 458
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=20.93 E-value=51 Score=29.85 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+||.|+=.+..| ..+|..|+++||+|++....
T Consensus 29 ~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5689998877776 46889999999999998754
No 459
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=20.89 E-value=5.1e+02 Score=24.08 Aligned_cols=43 Identities=23% Similarity=0.203 Sum_probs=29.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcchhhhHHH
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNAARFKTV 53 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 53 (433)
.++++++.++. -+- .++|+.|+++|++|.++.-....+.+++.
T Consensus 213 gk~~LVTGgsg-GIG--~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~ 255 (454)
T 3u0b_A 213 GKVAVVTGAAR-GIG--ATIAEVFARDGATVVAIDVDGAAEDLKRV 255 (454)
T ss_dssp TCEEEESSCSS-HHH--HHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred CCEEEEeCCch-HHH--HHHHHHHHHCCCEEEEEeCCccHHHHHHH
Confidence 46888885554 343 68899999999999888654333333333
No 460
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=20.80 E-value=79 Score=26.09 Aligned_cols=58 Identities=9% Similarity=-0.149 Sum_probs=39.9
Q ss_pred HHHHcCCcEEeccc----ccccchhHHHhhhhccceEEeeeec-----------cCCcccccchhhcccccccc
Q 013951 374 EGISAGVQMLTWPL----FADQFCNEKLIVNVLRIGVSVGVEV-----------DLPITTSNYLCKISCNSQAQ 432 (433)
Q Consensus 374 eal~~GvP~v~~P~----~~DQ~~na~~v~e~~G~G~~l~~~~-----------~~~~~l~~ai~~il~~~~~~ 432 (433)
.++..++|++++|- ......|-.++ .+.|+=+..+... .+.+.+.++|.+.|++.+.|
T Consensus 116 ~~L~~~~plvlaPamn~~m~~h~~Nm~~L-~~~G~~ii~P~~~lacg~~g~g~mae~~~I~~~i~~~l~~~~~q 188 (207)
T 3mcu_A 116 ATLRNGKPVVLAVSTNDALGLNGVNLMRL-MATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLEALQGKQLQ 188 (207)
T ss_dssp HHHHTTCCEEEEEEETTTTTTTHHHHHHH-HHBTTEEECCEEESCTTTSTTCEEECGGGHHHHHHHHHTTCCCS
T ss_pred HHHhcCCCEEEEECCChhHHHHHHHHHHH-HHCCCEEECCCCccCCCCcCCcCCCCHHHHHHHHHHHHhCCCCC
Confidence 35778999999995 23446888999 5888876554331 34466777777777766543
No 461
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=20.78 E-value=2.3e+02 Score=28.65 Aligned_cols=40 Identities=23% Similarity=0.016 Sum_probs=35.4
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCc
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPV 45 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~ 45 (433)
++.||++.+.+..+|-.-..-++..|...|++|.......
T Consensus 603 ~r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v 642 (762)
T 2xij_A 603 RRPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQ 642 (762)
T ss_dssp SCCEEEEECCSSCCCCHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred CCCEEEEEecCcchhhHHHHHHHHHHHhCCeEEeeCCCCC
Confidence 5679999999999999999999999999999998765543
No 462
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=20.75 E-value=4.6e+02 Score=23.51 Aligned_cols=39 Identities=5% Similarity=0.048 Sum_probs=31.5
Q ss_pred EEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECCcch
Q 013951 9 HFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTPVNA 47 (433)
Q Consensus 9 ~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~~~~ 47 (433)
-++++-.++.|--.=++.++..+...|..|.++.++...
T Consensus 63 i~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s~ 101 (356)
T 3hr8_A 63 IVEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHAL 101 (356)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 355566678888888999999999999999999887543
No 463
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=20.73 E-value=89 Score=25.78 Aligned_cols=31 Identities=16% Similarity=0.306 Sum_probs=23.4
Q ss_pred CCCcEEE-ECCCCc-chHHHHHHcCCCcEEEec
Q 013951 116 LKPCCII-SDMCFP-WTVDTAAKFNVPRIIFHG 146 (433)
Q Consensus 116 ~~pD~vI-~D~~~~-~~~~~A~~~giP~v~~~~ 146 (433)
..||++| .|+..- -+..=|.++|||+|.+.-
T Consensus 114 ~~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvD 146 (208)
T 1vi6_A 114 REPEVVFVNDPAIDKQAVSEATAVGIPVVALCD 146 (208)
T ss_dssp CCCSEEEESCTTTTHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCEEEEECCCcchhHHHHHHHhCCCEEEEeC
Confidence 4789876 666443 677788999999999743
No 464
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=20.72 E-value=93 Score=27.40 Aligned_cols=31 Identities=16% Similarity=0.059 Sum_probs=22.6
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 10 FLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 10 il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.++++ |+.|-+- ..|+++|.++||+|+.+.-
T Consensus 7 ~vlVT-GatGfIG--~~l~~~L~~~G~~V~~~~r 37 (337)
T 2c29_D 7 TVCVT-GASGFIG--SWLVMRLLERGYTVRATVR 37 (337)
T ss_dssp EEEET-TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred EEEEE-CCchHHH--HHHHHHHHHCCCEEEEEEC
Confidence 34555 6666554 5688999999999987653
No 465
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=20.65 E-value=71 Score=26.26 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=25.2
Q ss_pred EEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 10 FLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 10 il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.+++-++..|+..-...+++.|.++|++|..+-.+
T Consensus 6 ~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 6 HFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp EEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred cEEEECCCCCccccHHHHHHHHHhCCCEEEEecCC
Confidence 34444466666666788999999999988777554
No 466
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=20.60 E-value=80 Score=27.42 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=24.0
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++|++. |+.|.+- ..++++|.++||+|+.++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 5 SRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 355544 5666664 56789999999999988754
No 467
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=20.59 E-value=1.5e+02 Score=23.58 Aligned_cols=37 Identities=16% Similarity=-0.045 Sum_probs=24.4
Q ss_pred cEEEEEcCC-----CCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYL-----APGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~-----~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..++++..| +...-.-+..+++.|.++|+.|..+-..
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 78 (220)
T 2fuk_A 37 PVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFR 78 (220)
T ss_dssp SEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCT
T ss_pred cCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecC
Confidence 445555554 3334444678999999999988776544
No 468
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=20.58 E-value=2.2e+02 Score=27.54 Aligned_cols=28 Identities=18% Similarity=0.135 Sum_probs=23.2
Q ss_pred CCCceeeecccch------hhHHHHHHcCCcEEecc
Q 013951 357 HPAVGGFLTHCGW------NSSLEGISAGVQMLTWP 386 (433)
Q Consensus 357 ~~~~~~~ItHGG~------gs~~eal~~GvP~v~~P 386 (433)
++.+ +++|.|. +.+.||-+.++|+|++-
T Consensus 73 ~p~v--~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 73 KAGV--ALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp SCEE--EEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEE--EEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 3455 8888886 68889999999999985
No 469
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=20.42 E-value=61 Score=29.39 Aligned_cols=39 Identities=5% Similarity=-0.078 Sum_probs=29.2
Q ss_pred CCcEEEEEcCCCCCChHH----HHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLIP----MFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P----~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+++||+++..+..+--.- ...++++|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 2 AKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 467899999775555443 347888888889999998754
No 470
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=20.35 E-value=42 Score=28.16 Aligned_cols=29 Identities=7% Similarity=-0.039 Sum_probs=24.7
Q ss_pred CCceeeecccchhhHHHHHHcCCcEEeccccc
Q 013951 358 PAVGGFLTHCGWNSSLEGISAGVQMLTWPLFA 389 (433)
Q Consensus 358 ~~~~~~ItHGG~gs~~eal~~GvP~v~~P~~~ 389 (433)
+++ +|+.||........ .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 555 99999999999875 689999999864
No 471
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=20.31 E-value=1.3e+02 Score=25.39 Aligned_cols=35 Identities=17% Similarity=0.205 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..|+++++..+.| + =.++|+.|+++|++|.++.-.
T Consensus 7 ~~k~~lVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 7 SEAVAVVTGGSSG-I--GLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp TTCEEEEETCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEeCCCCh-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 3467888855543 3 368899999999999887643
No 472
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=20.26 E-value=76 Score=26.53 Aligned_cols=38 Identities=13% Similarity=0.042 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
+..++++..+..|+..-+..+++.|.++|+.|..+-..
T Consensus 53 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 90 (262)
T 1jfr_A 53 TFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTN 90 (262)
T ss_dssp CEEEEEEECCTTCCGGGTTTHHHHHHTTTCEEEEECCS
T ss_pred CCCEEEEeCCcCCCchhHHHHHHHHHhCCCEEEEeCCC
Confidence 34566777777788777778889998888887766543
No 473
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=20.24 E-value=2.4e+02 Score=28.10 Aligned_cols=79 Identities=14% Similarity=0.094 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHhCCCCEEEEEeCCcchhhhhhhhchhhHHHHh-CCCCeEEeCccc----------HhhhhcCCCceeee
Q 013951 296 SQLIELGLGLEASNKPFVWVIRGVSKLEALEKWLVQENFEERI-KGRGLLIRGWAP----------QVLILSHPAVGGFL 364 (433)
Q Consensus 296 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~-~~~nv~~~~~~p----------q~~lL~~~~~~~~I 364 (433)
...+.+++.|++.+++.|+-+.+.... | +-..+ ..+.+....... +..+-..+.+ ++
T Consensus 83 ~~a~~lv~~L~~~GV~~vFg~PG~~~~--------p--l~dal~~~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgv--v~ 150 (677)
T 1t9b_A 83 TGGQIFNEMMSRQNVDTVFGYPGGAIL--------P--VYDAIHNSDKFNFVLPKHEQGAGHMAEGYARASGKPGV--VL 150 (677)
T ss_dssp BHHHHHHHHHHHTTCCEEEECCCGGGH--------H--HHHHTTTCSSSEEECCSSHHHHHHHHHHHHHHHSSCEE--EE
T ss_pred CHHHHHHHHHHHcCCCEEEEecCccHH--------H--HHHHHHhCCCCeEEEeCChHHHHHHHHHHHHHHCCCEE--EE
Confidence 345667888888888888877665431 1 11111 122333322211 1222234555 88
Q ss_pred cccchh------hHHHHHHcCCcEEecc
Q 013951 365 THCGWN------SSLEGISAGVQMLTWP 386 (433)
Q Consensus 365 tHGG~g------s~~eal~~GvP~v~~P 386 (433)
+|.|-| .+.||-+.++|+|++-
T Consensus 151 ~TsGpG~~N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 151 VTSGPGATNVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp ECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred ECCChHHHHHHHHHHHHHHcCCCEEEEe
Confidence 899964 7889999999999985
No 474
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=20.23 E-value=2.5e+02 Score=22.11 Aligned_cols=53 Identities=13% Similarity=0.125 Sum_probs=39.3
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCC--CEEEEEECCcchhhhHHHHHHhhhCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHG--AIVTIVTTPVNAARFKTVIARAIKSG 61 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~ 61 (433)
.+|++++ ++.+++.-+...++.|.+-| |+|.+++....-+++.++.++....+
T Consensus 6 p~V~Iim-gS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g 60 (166)
T 3oow_A 6 VQVGVIM-GSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERG 60 (166)
T ss_dssp EEEEEEE-SSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTT
T ss_pred CeEEEEE-CcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCC
Confidence 4788887 89999999999999999876 56777776665566666665553333
No 475
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=20.13 E-value=2.2e+02 Score=24.17 Aligned_cols=33 Identities=21% Similarity=-0.008 Sum_probs=24.6
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEEC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTT 43 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~ 43 (433)
.|+++++.++. -+ =.++|+.|+++|++|.++.-
T Consensus 13 gk~vlVTGas~-gI--G~~ia~~l~~~G~~V~~~~r 45 (278)
T 3sx2_A 13 GKVAFITGAAR-GQ--GRAHAVRLAADGADIIAVDL 45 (278)
T ss_dssp TCEEEEESTTS-HH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCC-hH--HHHHHHHHHHCCCeEEEEec
Confidence 46778885544 33 35789999999999998864
No 476
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=20.11 E-value=3.9e+02 Score=22.42 Aligned_cols=34 Identities=18% Similarity=0.056 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++..+ |-+ =.++|++|+++|++|.+....
T Consensus 18 ~k~~lVTGas-~gI--G~aia~~l~~~G~~V~~~~~~ 51 (270)
T 3is3_A 18 GKVALVTGSG-RGI--GAAVAVHLGRLGAKVVVNYAN 51 (270)
T ss_dssp TCEEEESCTT-SHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC-chH--HHHHHHHHHHCCCEEEEEcCC
Confidence 4678888554 433 368899999999999987643
No 477
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=20.10 E-value=79 Score=27.79 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 6 SQVHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 6 ~~~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
..+||.|+=.+..| ..+|+.|+++||+|+++...
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 34689998655554 56799999999999987543
No 478
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=20.10 E-value=2e+02 Score=22.96 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=59.5
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHC--CCEEEEEECCcchhhhHHHHHHhhhCCCCeEEEEecCCCccCCCCCCCCCC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQH--GAIVTIVTTPVNAARFKTVIARAIKSGLQIRLIEIQFPWQEAGIPEGCENC 85 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 85 (433)
.+|++.. ...+=.-++.+|+.|.+- ||++ +.+......+++. . |+.+..+. ..+++
T Consensus 28 g~V~lsv--~D~dK~~lv~~ak~~~~lL~Gf~L--~AT~gTa~~L~e~---~-----Gl~v~~v~------k~~eG---- 85 (178)
T 1vmd_A 28 KRIALIA--HDRRKRDLLEWVSFNLGTLSKHEL--YATGTTGALLQEK---L-----GLKVHRLK------SGPLG---- 85 (178)
T ss_dssp CEEEEEE--CGGGHHHHHHHHHHSHHHHTTSEE--EECHHHHHHHHHH---H-----CCCCEECS------CGGGT----
T ss_pred CEEEEEE--ehhhHHHHHHHHHHHHHHhcCCEE--EEchHHHHHHHHH---h-----CceeEEEe------ecCCC----
Confidence 3444443 344556799999999998 9965 4566555444442 1 55554431 11111
Q ss_pred CCCCCccHHHHHHHHHHhHHHHHHHHHhCCCCCcEEEECCC--Cc--------chHHHHHHcCCCcEE
Q 013951 86 DLLPTTDFARFMKSLHMLQQPFENLFKEKTLKPCCIISDMC--FP--------WTVDTAAKFNVPRII 143 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~pD~vI~D~~--~~--------~~~~~A~~~giP~v~ 143 (433)
-.+.+.+.+++ .+.|+||.-.- .. ....+|-..+||++.
T Consensus 86 -----------------G~pqI~d~I~~--geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~T 134 (178)
T 1vmd_A 86 -----------------GDQQIGAMIAE--GKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVAI 134 (178)
T ss_dssp -----------------HHHHHHHHHHT--TSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEES
T ss_pred -----------------CCchHHHHHHC--CCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEEe
Confidence 13468888999 99999996332 21 356788899999875
No 479
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=20.09 E-value=1.5e+02 Score=25.35 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
.|+++++.++ |-+- .++|++|+++|++|.++.-.
T Consensus 29 gk~vlVTGas-~gIG--~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 29 GKVAIVTGAG-AGIG--LAVARRLADEGCHVLCADID 62 (277)
T ss_dssp TCEEEETTTT-STHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC-cHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4678888554 4443 57899999999999888643
No 480
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=20.08 E-value=83 Score=27.23 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=23.4
Q ss_pred cEEEEEcCCCCCChHHHHHHHHHHHHCCCEEEEEECC
Q 013951 8 VHFLLLPYLAPGHLIPMFDIARLLAQHGAIVTIVTTP 44 (433)
Q Consensus 8 ~~il~~~~~~~GH~~P~l~La~~L~~rGH~Vt~~~~~ 44 (433)
++|++. |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 345443 5666664 46789999999999987644
No 481
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=20.07 E-value=1.2e+02 Score=24.62 Aligned_cols=41 Identities=17% Similarity=0.205 Sum_probs=27.3
Q ss_pred HHHHHhCCCCCcEEEECCCCc--chHHHHHH----cCCCcEEEecchHH
Q 013951 108 ENLFKEKTLKPCCIISDMCFP--WTVDTAAK----FNVPRIIFHGFSCF 150 (433)
Q Consensus 108 ~~~l~~~~~~pD~vI~D~~~~--~~~~~A~~----~giP~v~~~~~~~~ 150 (433)
.+.+++ .+||+||.|.... .+..+++. -++|++.++.....
T Consensus 41 l~~~~~--~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt~~~~~ 87 (230)
T 2oqr_A 41 LAEFDR--AGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSE 87 (230)
T ss_dssp HHHHHH--HCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHHH
T ss_pred HHHHhc--cCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEeCCCcH
Confidence 344555 6899999998654 44545443 36999888766543
No 482
>2g8l_A 287AA long hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.04A {Pyrococcus horikoshii} SCOP: e.50.1.1
Probab=20.05 E-value=1.4e+02 Score=26.14 Aligned_cols=35 Identities=11% Similarity=-0.073 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCCCChHHHHHHHHHHHH-CCCEEEEEE
Q 013951 7 QVHFLLLPYLAPGHLIPMFDIARLLAQ-HGAIVTIVT 42 (433)
Q Consensus 7 ~~~il~~~~~~~GH~~P~l~La~~L~~-rGH~Vt~~~ 42 (433)
.++|++++=-+.. +..=+.|++.|.+ +|++|++.+
T Consensus 160 ~~~v~~v~DNaGE-iv~Dl~l~~~Ll~~~g~~V~~~v 195 (299)
T 2g8l_A 160 AENILYITDNVGE-HYFDAILIEKIREISNAEVYIAG 195 (299)
T ss_dssp CSEEEEECCBTTH-HHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CCEEEEEecCCcc-HHHhHHHHHHHHHhcCCeEEEEE
Confidence 3589999877775 6677899999999 999999986
Done!