Query 013952
Match_columns 433
No_of_seqs 307 out of 3037
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 20:10:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013952.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013952hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lxd_A FAD-dependent pyridine 100.0 2.6E-56 8.8E-61 431.1 50.1 400 4-431 8-412 (415)
2 3ef6_A Toluene 1,2-dioxygenase 100.0 3.4E-56 1.2E-60 428.9 45.5 394 6-431 3-400 (410)
3 3fg2_P Putative rubredoxin red 100.0 3E-55 1E-59 422.0 48.2 395 6-430 2-400 (404)
4 4eqs_A Coenzyme A disulfide re 100.0 3.5E-55 1.2E-59 424.3 40.9 400 6-431 1-424 (437)
5 1q1r_A Putidaredoxin reductase 100.0 9.9E-54 3.4E-58 414.0 45.2 401 1-430 1-409 (431)
6 2gqw_A Ferredoxin reductase; f 100.0 1.8E-53 6.1E-58 409.5 43.8 390 5-430 7-400 (408)
7 3klj_A NAD(FAD)-dependent dehy 100.0 1.3E-53 4.3E-58 406.0 35.7 362 4-419 8-375 (385)
8 3oc4_A Oxidoreductase, pyridin 100.0 4.9E-53 1.7E-57 412.3 39.0 400 6-431 3-426 (452)
9 3iwa_A FAD-dependent pyridine 100.0 9E-53 3.1E-57 412.8 37.5 404 5-425 3-438 (472)
10 2bc0_A NADH oxidase; flavoprot 100.0 7.1E-53 2.4E-57 414.9 36.4 407 5-431 35-476 (490)
11 3kd9_A Coenzyme A disulfide re 100.0 1.6E-52 5.6E-57 408.4 38.0 395 5-422 3-418 (449)
12 2cdu_A NADPH oxidase; flavoenz 100.0 1.6E-52 5.3E-57 408.9 35.5 404 6-431 1-431 (452)
13 3ics_A Coenzyme A-disulfide re 100.0 1.5E-50 5.3E-55 407.4 42.6 400 5-425 36-461 (588)
14 1nhp_A NADH peroxidase; oxidor 100.0 3E-51 1E-55 399.3 35.2 402 6-431 1-430 (447)
15 3ntd_A FAD-dependent pyridine 100.0 2.6E-50 8.9E-55 404.6 43.0 397 6-423 2-443 (565)
16 3cgb_A Pyridine nucleotide-dis 100.0 7.5E-50 2.6E-54 392.3 42.1 401 6-431 37-467 (480)
17 2v3a_A Rubredoxin reductase; a 100.0 1.6E-49 5.3E-54 379.7 37.3 366 4-406 3-375 (384)
18 1xhc_A NADH oxidase /nitrite r 100.0 1.9E-49 6.4E-54 375.7 34.9 351 6-410 9-362 (367)
19 1m6i_A Programmed cell death p 100.0 4.1E-49 1.4E-53 387.6 35.3 403 4-422 10-484 (493)
20 1mo9_A ORF3; nucleotide bindin 100.0 1.1E-49 3.8E-54 394.8 27.5 389 3-422 41-497 (523)
21 2hqm_A GR, grase, glutathione 100.0 3E-50 1E-54 395.1 21.6 398 4-431 10-465 (479)
22 4b1b_A TRXR, thioredoxin reduc 100.0 4.9E-50 1.7E-54 394.2 22.3 393 5-431 42-515 (542)
23 1zmd_A Dihydrolipoyl dehydroge 100.0 2.4E-48 8.3E-53 381.6 33.5 395 5-430 6-456 (474)
24 3lad_A Dihydrolipoamide dehydr 100.0 6.3E-49 2.2E-53 386.1 28.7 394 4-430 2-454 (476)
25 2wpf_A Trypanothione reductase 100.0 2.7E-49 9.2E-54 389.1 26.1 395 2-431 4-469 (495)
26 2qae_A Lipoamide, dihydrolipoy 100.0 4E-48 1.4E-52 379.4 33.4 393 5-430 2-451 (468)
27 1ojt_A Surface protein; redox- 100.0 1.4E-48 4.7E-53 383.7 30.1 396 1-430 2-460 (482)
28 3l8k_A Dihydrolipoyl dehydroge 100.0 6.6E-49 2.3E-53 384.4 27.7 396 4-431 3-448 (466)
29 3dk9_A Grase, GR, glutathione 100.0 1.4E-49 4.7E-54 390.9 22.5 400 3-431 18-472 (478)
30 1zk7_A HGII, reductase, mercur 100.0 4.7E-48 1.6E-52 378.8 32.6 391 3-428 2-443 (467)
31 4dna_A Probable glutathione re 100.0 5E-49 1.7E-53 385.1 25.3 395 1-431 1-444 (463)
32 3urh_A Dihydrolipoyl dehydroge 100.0 1.8E-48 6.1E-53 384.0 28.8 391 5-430 25-474 (491)
33 1xdi_A RV3303C-LPDA; reductase 100.0 8E-48 2.7E-52 379.9 32.3 394 5-430 2-454 (499)
34 1ges_A Glutathione reductase; 100.0 1.1E-47 3.9E-52 373.8 32.9 393 3-431 2-444 (450)
35 2a8x_A Dihydrolipoyl dehydroge 100.0 6.6E-48 2.2E-52 377.5 30.9 392 5-430 3-447 (464)
36 1v59_A Dihydrolipoamide dehydr 100.0 4.3E-48 1.5E-52 380.4 28.5 397 2-431 2-462 (478)
37 3o0h_A Glutathione reductase; 100.0 3.1E-48 1.1E-52 381.4 27.4 392 4-431 25-464 (484)
38 1dxl_A Dihydrolipoamide dehydr 100.0 8.9E-48 3E-52 377.5 30.5 394 4-430 5-453 (470)
39 1ebd_A E3BD, dihydrolipoamide 100.0 2E-47 6.9E-52 373.1 32.5 392 5-430 3-444 (455)
40 2eq6_A Pyruvate dehydrogenase 100.0 2.9E-47 9.9E-52 372.4 33.4 389 5-430 6-444 (464)
41 1fec_A Trypanothione reductase 100.0 2.3E-48 7.8E-53 382.3 25.4 392 4-431 2-465 (490)
42 2r9z_A Glutathione amide reduc 100.0 5.1E-47 1.7E-51 370.3 33.3 393 3-431 2-442 (463)
43 3dgh_A TRXR-1, thioredoxin red 100.0 4.9E-48 1.7E-52 380.1 22.3 396 4-431 8-469 (483)
44 3ic9_A Dihydrolipoamide dehydr 100.0 1.7E-48 6E-53 383.3 18.7 396 1-430 4-456 (492)
45 1onf_A GR, grase, glutathione 100.0 5E-47 1.7E-51 373.9 29.0 401 5-431 2-490 (500)
46 3qfa_A Thioredoxin reductase 1 100.0 1.5E-47 5.2E-52 378.8 24.3 397 4-431 31-497 (519)
47 2yqu_A 2-oxoglutarate dehydrog 100.0 4.7E-46 1.6E-50 363.4 30.4 391 5-430 1-438 (455)
48 3dgz_A Thioredoxin reductase 2 100.0 5.9E-47 2E-51 372.7 23.8 395 5-430 6-468 (488)
49 1lvl_A Dihydrolipoamide dehydr 100.0 1.1E-45 3.8E-50 360.5 27.2 387 5-430 5-441 (458)
50 2x8g_A Thioredoxin glutathione 100.0 2.5E-44 8.6E-49 362.7 27.0 394 4-431 106-576 (598)
51 4gcm_A TRXR, thioredoxin reduc 100.0 9E-41 3.1E-45 310.4 27.1 295 1-332 2-305 (312)
52 4g6h_A Rotenone-insensitive NA 100.0 5.1E-41 1.7E-45 329.5 24.1 297 5-331 42-399 (502)
53 2zbw_A Thioredoxin reductase; 100.0 8.4E-40 2.9E-44 307.1 27.3 301 1-335 1-319 (335)
54 4a5l_A Thioredoxin reductase; 100.0 4.5E-40 1.5E-44 306.1 20.0 297 2-332 1-311 (314)
55 1trb_A Thioredoxin reductase; 100.0 1.4E-39 4.8E-44 303.6 22.7 299 1-334 1-315 (320)
56 3ab1_A Ferredoxin--NADP reduct 100.0 1.8E-38 6E-43 301.0 26.8 302 3-334 12-329 (360)
57 1fl2_A Alkyl hydroperoxide red 100.0 1.7E-38 5.7E-43 294.9 25.2 291 5-332 1-304 (310)
58 2q7v_A Thioredoxin reductase; 100.0 3E-38 1E-42 295.1 26.2 292 4-334 7-313 (325)
59 3vrd_B FCCB subunit, flavocyto 100.0 6E-39 2.1E-43 308.6 21.6 320 5-348 2-339 (401)
60 3cty_A Thioredoxin reductase; 100.0 2.4E-38 8.1E-43 295.1 25.0 291 4-334 15-317 (319)
61 3lzw_A Ferredoxin--NADP reduct 100.0 1.6E-38 5.6E-43 297.8 21.5 296 1-334 1-316 (332)
62 3f8d_A Thioredoxin reductase ( 100.0 2.6E-38 8.9E-43 295.3 22.8 291 5-333 15-317 (323)
63 2q0l_A TRXR, thioredoxin reduc 100.0 4.1E-38 1.4E-42 292.4 23.2 288 6-332 2-308 (311)
64 3itj_A Thioredoxin reductase 1 100.0 1.6E-38 5.6E-43 298.6 20.6 299 4-334 21-336 (338)
65 4fk1_A Putative thioredoxin re 100.0 2E-38 6.9E-43 293.3 20.4 283 3-332 4-299 (304)
66 3r9u_A Thioredoxin reductase; 100.0 8E-38 2.8E-42 290.9 24.1 290 4-332 3-311 (315)
67 3sx6_A Sulfide-quinone reducta 100.0 2.1E-37 7E-42 300.6 26.4 315 4-340 3-351 (437)
68 1vdc_A NTR, NADPH dependent th 100.0 6E-38 2E-42 294.2 19.9 302 1-334 4-324 (333)
69 3hyw_A Sulfide-quinone reducta 100.0 7.8E-38 2.7E-42 302.7 20.8 308 6-336 3-336 (430)
70 3fbs_A Oxidoreductase; structu 100.0 5.3E-38 1.8E-42 289.6 18.7 282 6-333 3-292 (297)
71 3h8l_A NADH oxidase; membrane 100.0 7.7E-37 2.6E-41 294.5 27.5 291 6-332 2-335 (409)
72 1hyu_A AHPF, alkyl hydroperoxi 100.0 6E-37 2E-41 302.9 26.3 292 4-332 211-515 (521)
73 2a87_A TRXR, TR, thioredoxin r 100.0 4.4E-37 1.5E-41 288.4 21.3 292 3-333 12-316 (335)
74 4a9w_A Monooxygenase; baeyer-v 100.0 8.7E-36 3E-40 282.0 18.5 299 5-334 3-353 (357)
75 3h28_A Sulfide-quinone reducta 100.0 3.2E-35 1.1E-39 284.7 20.8 303 6-336 3-336 (430)
76 3d1c_A Flavin-containing putat 100.0 7.4E-35 2.5E-39 277.1 21.5 302 5-333 4-339 (369)
77 2vdc_G Glutamate synthase [NAD 100.0 2.3E-34 7.7E-39 278.7 17.8 286 5-334 122-445 (456)
78 1gte_A Dihydropyrimidine dehyd 100.0 2.1E-33 7.2E-38 297.1 20.8 315 5-360 187-540 (1025)
79 1cjc_A Protein (adrenodoxin re 100.0 4.9E-33 1.7E-37 270.1 15.1 293 5-332 6-394 (460)
80 2gag_A Heterotetrameric sarcos 100.0 1.6E-32 5.6E-37 288.4 20.2 285 5-333 128-444 (965)
81 1lqt_A FPRA; NADP+ derivative, 100.0 1.9E-33 6.4E-38 272.8 11.8 289 5-332 3-386 (456)
82 2xve_A Flavin-containing monoo 100.0 2.1E-31 7.1E-36 259.7 22.5 284 6-332 3-340 (464)
83 3s5w_A L-ornithine 5-monooxyge 100.0 8.4E-32 2.9E-36 263.7 18.0 312 5-331 30-447 (463)
84 1o94_A Tmadh, trimethylamine d 100.0 2.3E-32 8E-37 280.0 9.8 300 5-359 389-719 (729)
85 1y56_A Hypothetical protein PH 100.0 2.9E-31 9.9E-36 260.7 15.3 259 4-332 107-376 (493)
86 3k30_A Histamine dehydrogenase 100.0 3.1E-32 1.1E-36 278.1 8.4 284 4-342 390-684 (690)
87 2gv8_A Monooxygenase; FMO, FAD 100.0 1.7E-30 5.7E-35 253.0 18.5 286 3-332 4-361 (447)
88 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.2E-29 4.1E-34 258.4 13.1 258 5-328 373-671 (671)
89 3gwf_A Cyclohexanone monooxyge 100.0 4.2E-29 1.4E-33 246.9 15.3 297 5-331 8-455 (540)
90 3uox_A Otemo; baeyer-villiger 99.9 2E-27 7E-32 235.1 14.6 189 4-197 8-220 (545)
91 4ap3_A Steroid monooxygenase; 99.9 4.3E-27 1.5E-31 233.0 16.7 180 4-197 20-226 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 1.1E-25 3.6E-30 223.9 15.3 299 4-332 15-465 (542)
93 2ywl_A Thioredoxin reductase r 99.9 3.5E-23 1.2E-27 175.7 16.3 158 164-335 3-173 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 7.7E-19 2.6E-23 172.5 25.6 286 5-297 39-457 (501)
95 2e5v_A L-aspartate oxidase; ar 99.7 3.9E-19 1.3E-23 173.3 2.4 193 80-299 128-340 (472)
96 2cul_A Glucose-inhibited divis 99.6 1.5E-15 5.2E-20 133.8 12.1 156 163-331 4-230 (232)
97 3fpz_A Thiazole biosynthetic e 99.6 1.7E-18 5.8E-23 161.1 -8.2 254 5-331 65-323 (326)
98 2gqf_A Hypothetical protein HI 99.6 3.2E-16 1.1E-20 149.3 4.2 120 1-126 1-169 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.4 1.1E-12 3.9E-17 126.6 8.6 94 203-299 203-307 (431)
100 1rp0_A ARA6, thiazole biosynth 99.4 3.4E-12 1.1E-16 115.9 11.2 168 162-333 39-275 (284)
101 2zxi_A TRNA uridine 5-carboxym 99.3 6.1E-11 2.1E-15 116.9 15.8 156 4-191 26-218 (637)
102 3oz2_A Digeranylgeranylglycero 99.2 6.1E-10 2.1E-14 105.9 19.7 57 204-261 102-161 (397)
103 3dme_A Conserved exported prot 99.2 1.6E-10 5.4E-15 108.9 15.4 59 203-262 149-209 (369)
104 2ywl_A Thioredoxin reductase r 99.2 4.7E-11 1.6E-15 100.5 8.6 109 6-128 2-113 (180)
105 1kf6_A Fumarate reductase flav 99.2 2.8E-11 9.4E-16 121.1 6.8 37 1-40 1-39 (602)
106 3v76_A Flavoprotein; structura 99.1 3E-11 1E-15 115.4 6.3 120 1-125 23-187 (417)
107 3ces_A MNMG, tRNA uridine 5-ca 99.1 1.3E-10 4.5E-15 115.0 9.3 157 4-192 27-220 (651)
108 1y56_B Sarcosine oxidase; dehy 99.1 6E-10 2.1E-14 105.6 13.3 58 203-262 148-205 (382)
109 3dje_A Fructosyl amine: oxygen 99.1 2E-09 6.9E-14 104.0 15.1 58 203-261 160-220 (438)
110 2cul_A Glucose-inhibited divis 99.0 4.1E-10 1.4E-14 98.8 7.8 112 5-126 3-126 (232)
111 3nix_A Flavoprotein/dehydrogen 99.0 3E-09 1E-13 102.2 14.2 60 204-263 106-167 (421)
112 2bry_A NEDD9 interacting prote 99.0 5.7E-11 1.9E-15 116.4 1.9 150 113-265 37-233 (497)
113 4dgk_A Phytoene dehydrogenase; 99.0 2.9E-10 1E-14 111.9 6.9 57 204-261 221-277 (501)
114 2i0z_A NAD(FAD)-utilizing dehy 99.0 5.6E-09 1.9E-13 101.0 14.0 59 203-262 133-191 (447)
115 2gag_B Heterotetrameric sarcos 98.9 1.2E-07 4.1E-12 90.4 21.2 58 203-262 173-230 (405)
116 3alj_A 2-methyl-3-hydroxypyrid 98.9 2.4E-09 8.1E-14 101.4 9.0 117 5-127 11-162 (379)
117 2x3n_A Probable FAD-dependent 98.9 1.4E-09 4.7E-14 103.8 7.3 123 1-126 1-167 (399)
118 2vou_A 2,6-dihydroxypyridine h 98.9 2.5E-09 8.6E-14 101.9 8.0 121 1-126 1-154 (397)
119 3pvc_A TRNA 5-methylaminomethy 98.9 3.8E-08 1.3E-12 100.4 17.2 58 203-262 411-469 (689)
120 1rp0_A ARA6, thiazole biosynth 98.9 3.3E-09 1.1E-13 96.1 8.0 119 5-126 39-192 (284)
121 3cgv_A Geranylgeranyl reductas 98.9 4E-08 1.4E-12 93.4 16.0 58 204-262 102-162 (397)
122 2gf3_A MSOX, monomeric sarcosi 98.9 3.5E-08 1.2E-12 93.6 15.1 72 186-263 135-206 (389)
123 3axb_A Putative oxidoreductase 98.9 8.9E-09 3E-13 99.7 11.0 59 203-262 180-254 (448)
124 3nrn_A Uncharacterized protein 98.9 4.3E-09 1.5E-13 101.1 8.7 61 203-267 188-248 (421)
125 3ihg_A RDME; flavoenzyme, anth 98.9 5.2E-09 1.8E-13 103.7 9.4 37 1-40 1-37 (535)
126 3atr_A Conserved archaeal prot 98.9 1.6E-09 5.4E-14 105.1 5.5 125 1-128 2-165 (453)
127 1s3e_A Amine oxidase [flavin-c 98.9 2.9E-09 1E-13 105.2 7.5 47 213-261 221-267 (520)
128 3cp8_A TRNA uridine 5-carboxym 98.8 2.4E-09 8.2E-14 106.0 6.2 157 4-191 20-213 (641)
129 1ryi_A Glycine oxidase; flavop 98.8 1.7E-08 5.8E-13 95.5 11.9 58 203-263 163-220 (382)
130 3ps9_A TRNA 5-methylaminomethy 98.8 5.6E-08 1.9E-12 99.0 16.2 58 203-262 416-473 (676)
131 3nlc_A Uncharacterized protein 98.8 9.7E-09 3.3E-13 100.9 9.8 119 5-126 107-278 (549)
132 2e4g_A Tryptophan halogenase; 98.8 3.2E-08 1.1E-12 98.3 13.3 61 203-264 193-254 (550)
133 3e1t_A Halogenase; flavoprotei 98.8 1.4E-08 4.8E-13 100.0 9.5 122 4-128 6-175 (512)
134 3pl8_A Pyranose 2-oxidase; sub 98.8 4.1E-10 1.4E-14 113.0 -1.8 54 215-268 271-330 (623)
135 2oln_A NIKD protein; flavoprot 98.8 9.4E-08 3.2E-12 90.9 14.6 57 203-262 152-208 (397)
136 3nyc_A D-arginine dehydrogenas 98.8 2.1E-08 7.2E-13 94.8 9.9 57 203-262 153-209 (381)
137 2bry_A NEDD9 interacting prote 98.8 8.2E-09 2.8E-13 101.0 7.2 118 5-127 92-232 (497)
138 4a9w_A Monooxygenase; baeyer-v 98.8 6.2E-08 2.1E-12 90.5 12.9 95 163-260 4-130 (357)
139 3nlc_A Uncharacterized protein 98.8 9.8E-08 3.4E-12 93.7 14.6 102 162-264 107-279 (549)
140 3i3l_A Alkylhalidase CMLS; fla 98.8 1.4E-08 4.9E-13 101.1 8.8 117 4-126 22-189 (591)
141 3ka7_A Oxidoreductase; structu 98.8 2.1E-08 7.2E-13 96.4 9.5 63 203-267 195-257 (425)
142 3fmw_A Oxygenase; mithramycin, 98.8 1.9E-08 6.5E-13 100.0 9.3 119 5-126 49-208 (570)
143 2xdo_A TETX2 protein; tetracyc 98.7 6.6E-08 2.2E-12 92.1 12.4 120 4-127 25-184 (398)
144 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 1.9E-08 6.5E-13 93.7 8.4 42 82-123 120-163 (342)
145 1pj5_A N,N-dimethylglycine oxi 98.7 8.7E-08 3E-12 99.9 14.2 58 203-262 150-207 (830)
146 3i6d_A Protoporphyrinogen oxid 98.7 9.2E-08 3.2E-12 93.1 13.1 52 205-260 236-287 (470)
147 1yvv_A Amine oxidase, flavin-c 98.7 7.1E-08 2.4E-12 89.5 11.5 32 6-40 3-34 (336)
148 1qo8_A Flavocytochrome C3 fuma 98.7 2.5E-08 8.6E-13 99.4 7.9 33 5-40 121-153 (566)
149 1y0p_A Fumarate reductase flav 98.7 4.9E-08 1.7E-12 97.4 9.6 33 5-40 126-158 (571)
150 3da1_A Glycerol-3-phosphate de 98.7 1.3E-07 4.5E-12 93.9 12.4 59 203-262 169-232 (561)
151 4at0_A 3-ketosteroid-delta4-5a 98.7 1.7E-07 5.9E-12 92.1 13.0 58 205-262 203-264 (510)
152 1d4d_A Flavocytochrome C fumar 98.6 8.4E-07 2.9E-11 88.3 17.4 61 203-263 254-318 (572)
153 3itj_A Thioredoxin reductase 1 98.6 9.7E-08 3.3E-12 88.5 10.0 101 162-265 22-145 (338)
154 3f8d_A Thioredoxin reductase ( 98.6 1.7E-07 5.8E-12 86.3 11.4 100 163-265 16-128 (323)
155 2qa1_A PGAE, polyketide oxygen 98.6 5.4E-08 1.9E-12 95.3 7.9 120 4-126 10-166 (500)
156 3v76_A Flavoprotein; structura 98.6 1.9E-07 6.6E-12 89.0 11.3 99 162-263 27-188 (417)
157 3lzw_A Ferredoxin--NADP reduct 98.6 1.2E-07 4.1E-12 87.7 9.6 101 163-265 8-129 (332)
158 2pyx_A Tryptophan halogenase; 98.6 2.1E-07 7E-12 92.0 11.6 60 204-264 175-235 (526)
159 3nks_A Protoporphyrinogen oxid 98.6 2.6E-08 9E-13 97.2 5.1 56 204-261 234-289 (477)
160 2zbw_A Thioredoxin reductase; 98.6 2.7E-07 9.1E-12 85.5 11.6 97 163-261 6-120 (335)
161 3p1w_A Rabgdi protein; GDI RAB 98.6 4E-09 1.4E-13 101.4 -0.9 59 203-261 255-313 (475)
162 2aqj_A Tryptophan halogenase, 98.6 4.2E-08 1.5E-12 97.2 6.4 37 1-40 1-40 (538)
163 1k0i_A P-hydroxybenzoate hydro 98.6 4.4E-08 1.5E-12 93.1 6.1 120 5-127 2-165 (394)
164 2q0l_A TRXR, thioredoxin reduc 98.6 3.8E-07 1.3E-11 83.5 12.2 98 164-264 3-116 (311)
165 3ab1_A Ferredoxin--NADP reduct 98.6 4.5E-07 1.5E-11 85.0 12.8 99 162-261 14-130 (360)
166 4ap3_A Steroid monooxygenase; 98.6 3.5E-07 1.2E-11 90.4 12.3 103 162-264 21-163 (549)
167 2qa2_A CABE, polyketide oxygen 98.6 1.4E-07 4.9E-12 92.3 9.4 120 4-126 11-167 (499)
168 3gwf_A Cyclohexanone monooxyge 98.6 4.1E-07 1.4E-11 89.8 12.5 102 163-264 9-151 (540)
169 3klj_A NAD(FAD)-dependent dehy 98.6 7.8E-08 2.7E-12 90.9 7.1 101 161-265 8-119 (385)
170 3rp8_A Flavoprotein monooxygen 98.6 9.2E-08 3.2E-12 91.3 7.6 120 4-126 22-182 (407)
171 3fbs_A Oxidoreductase; structu 98.6 3.7E-07 1.3E-11 82.9 11.3 100 163-265 3-115 (297)
172 1fl2_A Alkyl hydroperoxide red 98.6 3.5E-07 1.2E-11 83.7 11.2 101 164-264 3-117 (310)
173 2uzz_A N-methyl-L-tryptophan o 98.6 2.5E-07 8.6E-12 87.1 10.4 33 5-40 2-34 (372)
174 3sx6_A Sulfide-quinone reducta 98.6 1.1E-07 3.8E-12 91.6 8.0 100 163-267 5-117 (437)
175 3c4n_A Uncharacterized protein 98.5 3.6E-08 1.2E-12 94.1 4.3 33 5-40 36-70 (405)
176 2b9w_A Putative aminooxidase; 98.5 4.9E-09 1.7E-13 100.8 -1.8 53 205-260 204-256 (424)
177 2wdq_A Succinate dehydrogenase 98.5 6.1E-07 2.1E-11 89.5 13.1 59 203-261 142-205 (588)
178 2qcu_A Aerobic glycerol-3-phos 98.5 3.4E-07 1.2E-11 89.8 11.1 34 4-40 2-35 (501)
179 3alj_A 2-methyl-3-hydroxypyrid 98.5 6.4E-07 2.2E-11 84.6 12.4 99 162-265 11-163 (379)
180 2xve_A Flavin-containing monoo 98.5 7.8E-07 2.7E-11 86.3 13.2 103 163-265 3-171 (464)
181 2gqf_A Hypothetical protein HI 98.5 6.5E-07 2.2E-11 85.0 12.1 100 163-264 5-170 (401)
182 2gmh_A Electron transfer flavo 98.5 2.8E-07 9.5E-12 92.0 9.9 33 5-40 35-73 (584)
183 2yqu_A 2-oxoglutarate dehydrog 98.5 1.6E-07 5.4E-12 91.1 7.9 99 5-128 167-267 (455)
184 1vdc_A NTR, NADPH dependent th 98.5 3.5E-07 1.2E-11 84.7 9.8 99 163-265 9-127 (333)
185 1hyu_A AHPF, alkyl hydroperoxi 98.5 1.7E-06 5.8E-11 85.1 15.0 104 161-264 211-328 (521)
186 2q7v_A Thioredoxin reductase; 98.5 6.5E-07 2.2E-11 82.6 11.4 101 163-264 9-125 (325)
187 1chu_A Protein (L-aspartate ox 98.5 6.9E-07 2.4E-11 88.2 11.3 56 274-331 353-409 (540)
188 4fk1_A Putative thioredoxin re 98.5 1.1E-06 3.8E-11 80.2 11.9 100 164-264 8-119 (304)
189 3uox_A Otemo; baeyer-villiger 98.5 8.2E-07 2.8E-11 87.7 11.6 102 163-264 10-151 (545)
190 3d1c_A Flavin-containing putat 98.5 1.3E-06 4.5E-11 82.0 12.5 98 163-263 5-144 (369)
191 3jsk_A Cypbp37 protein; octame 98.5 3.1E-07 1.1E-11 84.1 7.7 33 5-40 79-113 (344)
192 3kkj_A Amine oxidase, flavin-c 98.4 1.5E-07 5.1E-12 84.6 5.4 33 5-40 2-34 (336)
193 2vvm_A Monoamine oxidase N; FA 98.4 3.8E-06 1.3E-10 82.2 15.8 56 203-260 254-310 (495)
194 2bs2_A Quinol-fumarate reducta 98.4 3.4E-07 1.2E-11 92.2 8.3 37 1-40 1-37 (660)
195 1trb_A Thioredoxin reductase; 98.4 9.6E-07 3.3E-11 81.1 10.8 98 163-264 6-118 (320)
196 3hyw_A Sulfide-quinone reducta 98.4 8.5E-08 2.9E-12 92.2 3.8 96 163-263 3-110 (430)
197 1xhc_A NADH oxidase /nitrite r 98.4 2.4E-07 8.3E-12 87.0 6.7 99 161-265 7-116 (367)
198 4gde_A UDP-galactopyranose mut 98.4 3.6E-07 1.2E-11 90.0 8.1 40 83-122 234-273 (513)
199 2gqw_A Ferredoxin reductase; f 98.4 9.6E-07 3.3E-11 84.2 10.5 97 5-127 145-241 (408)
200 2weu_A Tryptophan 5-halogenase 98.4 2E-06 6.8E-11 84.6 13.1 61 203-264 172-232 (511)
201 3cty_A Thioredoxin reductase; 98.4 1.7E-06 5.7E-11 79.6 11.7 98 163-264 17-128 (319)
202 2rgh_A Alpha-glycerophosphate 98.4 3.8E-07 1.3E-11 90.7 7.8 58 203-261 187-249 (571)
203 1nhp_A NADH peroxidase; oxidor 98.4 5.1E-07 1.7E-11 87.3 8.3 99 5-128 149-249 (447)
204 1lvl_A Dihydrolipoamide dehydr 98.4 3.9E-07 1.3E-11 88.3 7.4 97 5-128 171-271 (458)
205 2gv8_A Monooxygenase; FMO, FAD 98.4 1.6E-06 5.6E-11 83.7 11.7 102 161-264 5-181 (447)
206 2a87_A TRXR, TR, thioredoxin r 98.4 1.2E-06 4E-11 81.2 10.3 99 162-264 14-128 (335)
207 3fg2_P Putative rubredoxin red 98.4 5.6E-07 1.9E-11 85.7 8.0 97 163-264 2-112 (404)
208 1y0p_A Fumarate reductase flav 98.4 3.5E-06 1.2E-10 84.0 14.0 101 162-262 126-317 (571)
209 3vrd_B FCCB subunit, flavocyto 98.4 7.8E-07 2.7E-11 84.7 8.9 101 162-267 2-113 (401)
210 4hb9_A Similarities with proba 98.4 1.5E-06 5E-11 82.9 10.8 32 6-40 2-33 (412)
211 1q1r_A Putidaredoxin reductase 98.4 1E-06 3.4E-11 84.7 9.6 101 162-266 4-118 (431)
212 3h8l_A NADH oxidase; membrane 98.4 2.7E-07 9.1E-12 88.2 5.5 98 163-265 2-116 (409)
213 2x3n_A Probable FAD-dependent 98.4 1.9E-06 6.6E-11 81.8 11.5 101 163-264 7-168 (399)
214 2v3a_A Rubredoxin reductase; a 98.4 1.1E-06 3.8E-11 83.0 9.7 99 5-127 145-245 (384)
215 3c96_A Flavin-containing monoo 98.4 4.6E-07 1.6E-11 86.5 7.0 37 1-40 1-37 (410)
216 3h28_A Sulfide-quinone reducta 98.4 2.4E-07 8.4E-12 89.0 5.1 98 163-265 3-112 (430)
217 1ges_A Glutathione reductase; 98.4 6.5E-07 2.2E-11 86.5 7.9 99 5-128 167-268 (450)
218 3ef6_A Toluene 1,2-dioxygenase 98.4 1.5E-06 5.3E-11 82.8 10.3 99 163-265 3-114 (410)
219 1qo8_A Flavocytochrome C3 fuma 98.4 2.2E-06 7.7E-11 85.3 11.8 100 163-262 122-312 (566)
220 2h88_A Succinate dehydrogenase 98.3 5.9E-07 2E-11 89.8 7.6 33 5-40 18-50 (621)
221 2eq6_A Pyruvate dehydrogenase 98.3 6.7E-07 2.3E-11 86.8 7.6 99 5-128 169-274 (464)
222 3lxd_A FAD-dependent pyridine 98.3 2.3E-06 7.8E-11 81.8 10.9 99 5-127 152-253 (415)
223 2r9z_A Glutathione amide reduc 98.3 7.3E-07 2.5E-11 86.5 7.5 98 5-127 166-266 (463)
224 4a5l_A Thioredoxin reductase; 98.3 2.7E-06 9.4E-11 77.8 11.1 98 164-264 6-123 (314)
225 4eqs_A Coenzyme A disulfide re 98.3 1.7E-06 5.9E-11 83.1 9.8 96 5-127 147-242 (437)
226 2gjc_A Thiazole biosynthetic e 98.3 5.8E-06 2E-10 75.3 12.6 167 162-331 65-323 (326)
227 3kd9_A Coenzyme A disulfide re 98.3 1.3E-06 4.6E-11 84.3 9.0 100 162-265 3-117 (449)
228 2dkh_A 3-hydroxybenzoate hydro 98.3 7.1E-07 2.4E-11 90.1 7.1 34 4-40 31-65 (639)
229 3oc4_A Oxidoreductase, pyridin 98.3 1.5E-06 5.1E-11 84.1 9.1 101 163-265 3-118 (452)
230 2r0c_A REBC; flavin adenine di 98.3 1.2E-06 4E-11 87.0 8.3 33 5-40 26-58 (549)
231 2vou_A 2,6-dihydroxypyridine h 98.3 3.9E-06 1.3E-10 79.7 11.6 101 162-264 5-155 (397)
232 1ebd_A E3BD, dihydrolipoamide 98.3 7.4E-07 2.5E-11 86.3 6.7 99 5-128 170-273 (455)
233 3ces_A MNMG, tRNA uridine 5-ca 98.3 6.2E-06 2.1E-10 81.8 13.0 99 163-263 29-182 (651)
234 2zxi_A TRNA uridine 5-carboxym 98.3 6.4E-06 2.2E-10 81.4 12.8 100 163-264 28-182 (637)
235 2gjc_A Thiazole biosynthetic e 98.3 3.2E-06 1.1E-10 77.0 9.9 33 5-40 65-99 (326)
236 3r9u_A Thioredoxin reductase; 98.3 3E-06 1E-10 77.5 9.9 101 162-265 4-121 (315)
237 1yvv_A Amine oxidase, flavin-c 98.3 9.8E-06 3.3E-10 74.9 13.4 97 163-262 3-162 (336)
238 3ics_A Coenzyme A-disulfide re 98.2 2.5E-06 8.6E-11 85.4 9.6 103 161-265 35-155 (588)
239 1onf_A GR, grase, glutathione 98.2 2.2E-06 7.4E-11 84.0 8.6 98 5-127 176-277 (500)
240 1k0i_A P-hydroxybenzoate hydro 98.2 5.7E-06 1.9E-10 78.4 11.3 101 163-264 3-165 (394)
241 1c0p_A D-amino acid oxidase; a 98.2 8.5E-07 2.9E-11 83.2 5.5 37 1-40 2-38 (363)
242 2hqm_A GR, grase, glutathione 98.2 1.6E-06 5.6E-11 84.4 7.6 98 5-127 185-287 (479)
243 1w4x_A Phenylacetone monooxyge 98.2 1E-05 3.4E-10 80.1 13.2 98 163-260 17-152 (542)
244 2wpf_A Trypanothione reductase 98.2 2.1E-06 7.2E-11 84.0 8.1 98 5-127 191-294 (495)
245 1fec_A Trypanothione reductase 98.2 2.3E-06 7.7E-11 83.6 8.0 98 5-127 187-290 (490)
246 1v59_A Dihydrolipoamide dehydr 98.2 1.7E-06 5.8E-11 84.3 7.1 99 5-128 183-290 (478)
247 3iwa_A FAD-dependent pyridine 98.2 3.8E-06 1.3E-10 81.7 9.5 102 162-265 3-128 (472)
248 3s5w_A L-ornithine 5-monooxyge 98.2 3E-06 1E-10 82.3 8.7 102 164-265 32-195 (463)
249 3i3l_A Alkylhalidase CMLS; fla 98.2 1.3E-05 4.6E-10 79.7 13.4 101 162-263 23-189 (591)
250 3atr_A Conserved archaeal prot 98.2 8.6E-06 3E-10 78.7 11.8 101 163-264 7-164 (453)
251 1mo9_A ORF3; nucleotide bindin 98.2 2.4E-06 8.2E-11 84.2 7.9 97 6-127 215-318 (523)
252 2bc0_A NADH oxidase; flavoprot 98.2 2.7E-06 9.1E-11 83.2 8.1 99 5-128 194-294 (490)
253 1ojt_A Surface protein; redox- 98.2 1.5E-06 5E-11 84.9 6.1 98 5-127 185-288 (482)
254 4gcm_A TRXR, thioredoxin reduc 98.2 1.1E-05 3.7E-10 73.8 11.5 98 164-265 8-119 (312)
255 1zmd_A Dihydrolipoyl dehydroge 98.2 2.4E-06 8.1E-11 83.2 7.4 100 5-128 178-285 (474)
256 2a8x_A Dihydrolipoyl dehydroge 98.2 2.5E-06 8.5E-11 82.8 7.3 98 5-127 171-273 (464)
257 1xdi_A RV3303C-LPDA; reductase 98.2 3.6E-06 1.2E-10 82.4 8.2 98 5-127 182-281 (499)
258 2gmh_A Electron transfer flavo 98.1 2.7E-05 9.1E-10 77.6 14.3 102 163-264 36-219 (584)
259 4b1b_A TRXR, thioredoxin reduc 98.1 5.7E-06 2E-10 81.3 9.3 97 5-128 223-322 (542)
260 2cdu_A NADPH oxidase; flavoenz 98.1 3.6E-06 1.2E-10 81.4 7.6 100 5-128 149-250 (452)
261 4hb9_A Similarities with proba 98.1 2.2E-05 7.4E-10 74.7 13.0 101 163-264 2-168 (412)
262 2qae_A Lipoamide, dihydrolipoy 98.1 3.5E-06 1.2E-10 81.8 7.4 98 5-127 174-278 (468)
263 3ntd_A FAD-dependent pyridine 98.1 4.3E-06 1.5E-10 83.4 8.1 101 163-265 2-120 (565)
264 3cgb_A Pyridine nucleotide-dis 98.1 4.3E-06 1.5E-10 81.5 7.8 97 5-127 186-284 (480)
265 3cp8_A TRNA uridine 5-carboxym 98.1 2.2E-05 7.4E-10 77.9 12.6 99 163-263 22-175 (641)
266 1dxl_A Dihydrolipoamide dehydr 98.1 2.5E-06 8.6E-11 82.9 6.0 98 5-127 177-281 (470)
267 3e1t_A Halogenase; flavoprotei 98.1 2.5E-05 8.4E-10 76.7 13.0 100 163-263 8-173 (512)
268 3o0h_A Glutathione reductase; 98.1 5.1E-06 1.7E-10 81.1 7.9 99 5-128 191-291 (484)
269 3qj4_A Renalase; FAD/NAD(P)-bi 98.1 1.6E-05 5.4E-10 73.8 10.5 94 164-259 3-162 (342)
270 2vdc_G Glutamate synthase [NAD 98.1 3E-06 1E-10 81.7 5.5 90 161-261 121-218 (456)
271 3rp8_A Flavoprotein monooxygen 98.1 1.9E-05 6.4E-10 75.2 11.0 101 161-265 22-184 (407)
272 1jnr_A Adenylylsulfate reducta 98.1 1.1E-05 3.7E-10 81.4 9.6 33 5-40 22-58 (643)
273 3ic9_A Dihydrolipoamide dehydr 98.0 6.8E-06 2.3E-10 80.3 7.6 98 5-128 174-277 (492)
274 2uzz_A N-methyl-L-tryptophan o 98.0 2.6E-05 9E-10 73.1 11.4 55 205-262 150-204 (372)
275 2xdo_A TETX2 protein; tetracyc 98.0 2.7E-05 9.2E-10 73.9 11.5 102 161-264 25-184 (398)
276 3ihg_A RDME; flavoenzyme, anth 98.0 2.7E-05 9.3E-10 76.9 11.8 100 163-262 6-183 (535)
277 4g6h_A Rotenone-insensitive NA 98.0 5.2E-06 1.8E-10 81.1 6.4 100 163-265 43-172 (502)
278 1m6i_A Programmed cell death p 98.0 1.5E-05 5.1E-10 77.9 9.5 99 5-127 180-284 (493)
279 1zk7_A HGII, reductase, mercur 98.0 1.3E-05 4.6E-10 77.7 9.1 96 5-127 176-273 (467)
280 3fmw_A Oxygenase; mithramycin, 98.0 2.3E-05 7.9E-10 77.8 10.9 99 163-263 50-208 (570)
281 4dna_A Probable glutathione re 98.0 9.6E-06 3.3E-10 78.6 7.9 98 5-128 170-271 (463)
282 3lad_A Dihydrolipoamide dehydr 98.0 1.3E-05 4.4E-10 78.0 8.8 99 5-128 180-283 (476)
283 1pn0_A Phenol 2-monooxygenase; 98.0 6.8E-06 2.3E-10 83.1 6.9 33 5-40 8-45 (665)
284 2aqj_A Tryptophan halogenase, 98.0 9.5E-05 3.2E-09 73.0 14.8 57 207-264 168-224 (538)
285 2yg5_A Putrescine oxidase; oxi 98.0 4E-06 1.4E-10 81.1 4.7 37 1-40 1-37 (453)
286 3urh_A Dihydrolipoyl dehydroge 98.0 1.4E-05 4.7E-10 78.1 7.9 99 5-128 198-303 (491)
287 3l8k_A Dihydrolipoyl dehydroge 98.0 3.1E-05 1.1E-09 75.1 10.3 97 164-265 6-147 (466)
288 3dgh_A TRXR-1, thioredoxin red 97.9 1.3E-05 4.4E-10 78.2 7.4 97 5-128 187-292 (483)
289 3dk9_A Grase, GR, glutathione 97.9 1.2E-05 4.2E-10 78.2 7.1 99 5-128 187-296 (478)
290 1v0j_A UDP-galactopyranose mut 97.9 7.9E-06 2.7E-10 77.5 5.5 34 4-40 6-40 (399)
291 2qa2_A CABE, polyketide oxygen 97.9 9.1E-05 3.1E-09 72.3 12.9 102 161-264 11-168 (499)
292 3jsk_A Cypbp37 protein; octame 97.9 0.0001 3.5E-09 67.5 12.3 168 162-332 79-334 (344)
293 2bcg_G Secretory pathway GDP d 97.9 1E-05 3.5E-10 78.2 5.8 60 203-263 241-301 (453)
294 1rsg_A FMS1 protein; FAD bindi 97.9 8.3E-06 2.8E-10 80.3 4.8 41 219-260 215-255 (516)
295 3c96_A Flavin-containing monoo 97.9 7.1E-05 2.4E-09 71.2 10.7 101 162-265 4-172 (410)
296 3dgz_A Thioredoxin reductase 2 97.8 3.4E-05 1.2E-09 75.3 8.5 97 5-128 185-290 (488)
297 2qa1_A PGAE, polyketide oxygen 97.8 0.00014 4.9E-09 70.9 12.7 102 161-264 10-167 (500)
298 1y56_A Hypothetical protein PH 97.8 2.6E-05 8.8E-10 76.2 7.1 99 163-264 109-221 (493)
299 2e1m_A L-glutamate oxidase; L- 97.8 1.5E-05 5.3E-10 74.3 5.3 38 3-43 42-80 (376)
300 3kkj_A Amine oxidase, flavin-c 97.8 0.00038 1.3E-08 61.9 14.2 34 164-197 4-37 (336)
301 3hdq_A UDP-galactopyranose mut 97.8 2E-05 6.7E-10 74.2 5.7 34 4-40 28-61 (397)
302 2jae_A L-amino acid oxidase; o 97.8 1.7E-05 5.8E-10 77.5 5.5 36 2-40 8-43 (489)
303 1cjc_A Protein (adrenodoxin re 97.8 7.6E-06 2.6E-10 79.1 2.7 91 161-262 5-106 (460)
304 3c4n_A Uncharacterized protein 97.8 4.6E-05 1.6E-09 72.5 7.8 54 206-262 174-236 (405)
305 2gag_A Heterotetrameric sarcos 97.8 6E-05 2.1E-09 79.5 9.4 101 162-264 128-255 (965)
306 3ihm_A Styrene monooxygenase A 97.8 1.5E-05 5.1E-10 76.5 4.2 33 5-40 22-54 (430)
307 2qcu_A Aerobic glycerol-3-phos 97.8 0.00022 7.6E-09 69.7 12.6 57 205-263 150-211 (501)
308 3qfa_A Thioredoxin reductase 1 97.7 8.3E-05 2.8E-09 73.1 9.0 97 5-128 210-318 (519)
309 4dsg_A UDP-galactopyranose mut 97.7 2.8E-05 9.6E-10 75.7 5.6 34 4-40 8-42 (484)
310 1gte_A Dihydropyrimidine dehyd 97.7 1.7E-05 5.9E-10 84.2 4.1 94 162-264 187-290 (1025)
311 3lov_A Protoporphyrinogen oxid 97.7 2.7E-05 9.1E-10 75.8 4.9 39 219-260 249-287 (475)
312 3g3e_A D-amino-acid oxidase; F 97.7 2.2E-05 7.4E-10 73.1 3.9 46 203-262 141-186 (351)
313 3k30_A Histamine dehydrogenase 97.7 7.4E-05 2.5E-09 76.1 8.2 97 6-126 524-625 (690)
314 2e5v_A L-aspartate oxidase; ar 97.7 0.00026 9E-09 68.5 11.6 99 164-264 1-178 (472)
315 1sez_A Protoporphyrinogen oxid 97.6 3.1E-05 1.1E-09 75.9 4.6 34 4-40 12-45 (504)
316 1lqt_A FPRA; NADP+ derivative, 97.6 1E-05 3.4E-10 78.1 1.0 90 161-261 2-107 (456)
317 1ps9_A 2,4-dienoyl-COA reducta 97.6 8.2E-05 2.8E-09 75.5 7.4 87 162-265 373-470 (671)
318 2x8g_A Thioredoxin glutathione 97.6 0.00014 4.8E-09 72.9 8.9 97 5-127 286-397 (598)
319 3c4a_A Probable tryptophan hyd 97.6 4.4E-05 1.5E-09 71.9 4.6 32 6-40 1-34 (381)
320 1d5t_A Guanine nucleotide diss 97.6 6.8E-05 2.3E-09 71.9 5.7 59 203-263 233-291 (433)
321 2ivd_A PPO, PPOX, protoporphyr 97.6 5.4E-05 1.8E-09 73.6 4.9 53 204-261 238-293 (478)
322 3gyx_A Adenylylsulfate reducta 97.5 5E-05 1.7E-09 76.4 4.4 33 5-40 22-60 (662)
323 2iid_A L-amino-acid oxidase; f 97.5 6.6E-05 2.3E-09 73.4 5.2 34 4-40 32-65 (498)
324 3g5s_A Methylenetetrahydrofola 97.5 8.3E-05 2.9E-09 68.7 5.3 32 6-40 2-33 (443)
325 1i8t_A UDP-galactopyranose mut 97.5 6.7E-05 2.3E-09 70.2 4.7 32 6-40 2-33 (367)
326 2bi7_A UDP-galactopyranose mut 97.5 7.6E-05 2.6E-09 70.3 4.7 33 5-40 3-35 (384)
327 1kf6_A Fumarate reductase flav 97.4 0.001 3.5E-08 66.4 12.0 97 163-260 6-195 (602)
328 2dkh_A 3-hydroxybenzoate hydro 97.4 0.0011 3.7E-08 66.8 11.6 100 163-262 33-211 (639)
329 1o94_A Tmadh, trimethylamine d 97.3 0.00034 1.2E-08 71.6 7.3 98 5-127 528-648 (729)
330 3c4a_A Probable tryptophan hyd 97.3 0.00014 4.7E-09 68.5 3.8 87 164-263 2-144 (381)
331 1b37_A Protein (polyamine oxid 97.2 0.00026 8.9E-09 68.7 5.2 54 205-260 207-268 (472)
332 2r0c_A REBC; flavin adenine di 97.2 0.0016 5.4E-08 64.4 10.8 96 163-263 27-197 (549)
333 1chu_A Protein (L-aspartate ox 97.2 0.0011 3.9E-08 65.1 9.6 33 163-196 9-41 (540)
334 1ju2_A HydroxynitrIle lyase; f 97.2 0.00017 5.7E-09 71.1 3.3 55 213-267 203-266 (536)
335 1kdg_A CDH, cellobiose dehydro 97.2 0.00033 1.1E-08 69.3 5.3 58 209-267 201-266 (546)
336 4gut_A Lysine-specific histone 97.1 0.00034 1.2E-08 71.6 4.8 42 217-260 542-583 (776)
337 3t37_A Probable dehydrogenase; 97.0 0.0004 1.4E-08 68.4 4.3 52 215-267 222-276 (526)
338 2z3y_A Lysine-specific histone 97.0 0.00054 1.9E-08 69.3 5.1 33 5-40 107-139 (662)
339 2h88_A Succinate dehydrogenase 97.0 0.0056 1.9E-07 61.1 12.1 52 210-262 161-217 (621)
340 2xag_A Lysine-specific histone 96.9 0.00064 2.2E-08 70.2 5.2 33 5-40 278-310 (852)
341 3q9t_A Choline dehydrogenase a 96.9 0.0005 1.7E-08 68.1 4.2 53 215-267 217-275 (577)
342 4gut_A Lysine-specific histone 96.9 0.007 2.4E-07 62.0 12.6 34 163-196 337-370 (776)
343 2bs2_A Quinol-fumarate reducta 96.9 0.0094 3.2E-07 60.0 13.3 51 210-261 164-219 (660)
344 1pn0_A Phenol 2-monooxygenase; 96.9 0.0069 2.4E-07 61.2 11.9 31 164-194 10-45 (665)
345 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00051 1.8E-08 69.1 3.5 33 5-40 56-96 (721)
346 2jbv_A Choline oxidase; alcoho 96.8 0.00078 2.7E-08 66.4 4.6 58 210-267 215-278 (546)
347 1coy_A Cholesterol oxidase; ox 96.8 0.001 3.5E-08 65.0 5.3 58 210-267 233-298 (507)
348 1n4w_A CHOD, cholesterol oxida 96.8 0.0011 3.8E-08 64.7 5.1 34 4-40 4-37 (504)
349 1gpe_A Protein (glucose oxidas 96.8 0.0011 3.9E-08 65.9 5.1 56 212-267 239-302 (587)
350 3qvp_A Glucose oxidase; oxidor 96.7 0.00095 3.2E-08 66.1 4.4 60 208-267 231-298 (583)
351 4gde_A UDP-galactopyranose mut 96.7 0.0017 5.9E-08 63.5 6.1 43 214-260 232-274 (513)
352 4b63_A L-ornithine N5 monooxyg 96.7 0.0081 2.8E-07 58.5 10.7 61 205-265 146-217 (501)
353 1jnr_A Adenylylsulfate reducta 96.6 0.015 5E-07 58.6 12.4 48 212-260 159-216 (643)
354 3lk7_A UDP-N-acetylmuramoylala 96.5 0.0039 1.3E-07 59.8 6.7 130 5-191 9-144 (451)
355 3fim_B ARYL-alcohol oxidase; A 96.5 0.0012 4E-08 65.2 3.0 61 207-267 211-281 (566)
356 4g65_A TRK system potassium up 96.4 0.0098 3.4E-07 57.1 8.8 100 139-261 210-311 (461)
357 3gyx_A Adenylylsulfate reducta 95.9 0.03 1E-06 56.2 10.1 51 210-260 172-231 (662)
358 3lk7_A UDP-N-acetylmuramoylala 95.9 0.01 3.4E-07 57.0 6.2 82 161-267 8-89 (451)
359 4hv4_A UDP-N-acetylmuramate--L 95.9 0.0053 1.8E-07 59.6 4.2 126 4-189 21-152 (494)
360 3eag_A UDP-N-acetylmuramate:L- 95.6 0.021 7.2E-07 52.1 6.9 80 161-267 3-83 (326)
361 1vg0_A RAB proteins geranylger 95.5 0.014 4.8E-07 58.0 5.7 61 203-263 377-438 (650)
362 3eag_A UDP-N-acetylmuramate:L- 95.5 0.014 4.8E-07 53.3 5.2 78 5-129 4-82 (326)
363 4dgk_A Phytoene dehydrogenase; 95.5 0.011 3.6E-07 57.6 4.6 35 163-197 2-36 (501)
364 3llv_A Exopolyphosphatase-rela 95.3 0.024 8.2E-07 44.5 5.3 33 5-40 6-38 (141)
365 1id1_A Putative potassium chan 95.2 0.028 9.6E-07 44.9 5.6 33 5-40 3-35 (153)
366 3fpz_A Thiazole biosynthetic e 95.1 0.019 6.5E-07 52.4 4.9 73 155-227 58-139 (326)
367 1lss_A TRK system potassium up 94.8 0.032 1.1E-06 43.5 4.8 33 5-40 4-36 (140)
368 3fwz_A Inner membrane protein 94.8 0.041 1.4E-06 43.2 5.4 32 6-40 8-39 (140)
369 3oz2_A Digeranylgeranylglycero 94.8 0.028 9.7E-07 52.4 5.2 34 164-197 6-39 (397)
370 3ic5_A Putative saccharopine d 94.8 0.031 1E-06 42.1 4.4 33 5-40 5-38 (118)
371 2g1u_A Hypothetical protein TM 94.7 0.038 1.3E-06 44.2 5.2 33 5-40 19-51 (155)
372 3tl2_A Malate dehydrogenase; c 94.4 0.045 1.5E-06 49.5 5.2 38 1-40 4-41 (315)
373 2iid_A L-amino-acid oxidase; f 94.3 0.054 1.9E-06 52.5 6.0 61 161-221 32-109 (498)
374 3dfz_A SIRC, precorrin-2 dehyd 94.1 0.062 2.1E-06 45.7 5.3 107 161-298 30-141 (223)
375 3nrn_A Uncharacterized protein 94.1 0.053 1.8E-06 51.3 5.4 35 163-197 1-35 (421)
376 2bcg_G Secretory pathway GDP d 94.1 0.087 3E-06 50.4 6.9 34 4-40 10-43 (453)
377 2hmt_A YUAA protein; RCK, KTN, 94.0 0.059 2E-06 42.1 4.7 33 5-40 6-38 (144)
378 1d5t_A Guanine nucleotide diss 93.9 0.06 2E-06 51.3 5.3 36 2-40 3-38 (433)
379 4hv4_A UDP-N-acetylmuramate--L 93.9 0.072 2.5E-06 51.6 5.9 77 161-267 21-98 (494)
380 3i83_A 2-dehydropantoate 2-red 93.9 0.19 6.3E-06 45.6 8.4 82 163-267 3-88 (320)
381 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.069 2.4E-06 45.5 5.0 33 5-40 31-63 (223)
382 1vg0_A RAB proteins geranylger 93.8 0.21 7.2E-06 49.6 9.1 33 5-40 8-40 (650)
383 3ka7_A Oxidoreductase; structu 93.8 0.062 2.1E-06 50.9 5.2 34 164-197 2-35 (425)
384 3ihm_A Styrene monooxygenase A 93.7 0.053 1.8E-06 51.6 4.5 34 162-195 22-55 (430)
385 4e12_A Diketoreductase; oxidor 93.6 0.081 2.8E-06 47.1 5.3 36 1-40 1-36 (283)
386 2e1m_A L-glutamate oxidase; L- 93.4 0.087 3E-06 48.9 5.4 36 161-196 43-79 (376)
387 2b9w_A Putative aminooxidase; 93.4 0.088 3E-06 49.8 5.7 61 161-222 5-82 (424)
388 3dme_A Conserved exported prot 93.4 0.078 2.7E-06 48.9 5.1 33 163-195 5-37 (369)
389 3pqe_A L-LDH, L-lactate dehydr 93.4 0.11 3.6E-06 47.3 5.8 39 1-40 1-39 (326)
390 3g5s_A Methylenetetrahydrofola 93.4 0.093 3.2E-06 48.7 5.3 33 163-195 2-34 (443)
391 3k7m_X 6-hydroxy-L-nicotine ox 93.2 0.081 2.8E-06 50.2 5.0 34 164-197 3-36 (431)
392 3nks_A Protoporphyrinogen oxid 93.2 0.08 2.7E-06 51.0 5.0 35 163-197 3-39 (477)
393 2x5o_A UDP-N-acetylmuramoylala 93.2 0.037 1.3E-06 52.8 2.5 78 161-267 4-81 (439)
394 1ryi_A Glycine oxidase; flavop 93.1 0.085 2.9E-06 49.0 4.9 33 163-195 18-50 (382)
395 2g1u_A Hypothetical protein TM 93.1 0.12 4.2E-06 41.2 5.2 36 161-196 18-53 (155)
396 1y6j_A L-lactate dehydrogenase 93.1 0.11 3.8E-06 47.0 5.4 36 4-40 6-41 (318)
397 3cgv_A Geranylgeranyl reductas 93.1 0.091 3.1E-06 49.1 5.1 35 163-197 5-39 (397)
398 3c85_A Putative glutathione-re 93.1 0.12 4.1E-06 42.5 5.2 32 6-40 40-72 (183)
399 2oln_A NIKD protein; flavoprot 93.1 0.086 3E-06 49.4 4.9 34 163-196 5-38 (397)
400 2pyx_A Tryptophan halogenase; 93.0 0.059 2E-06 52.7 3.8 34 162-195 7-52 (526)
401 2jae_A L-amino acid oxidase; o 92.9 0.11 3.8E-06 50.2 5.6 36 162-197 11-46 (489)
402 3nix_A Flavoprotein/dehydrogen 92.9 0.089 3.1E-06 49.7 4.8 33 163-195 6-38 (421)
403 2gf3_A MSOX, monomeric sarcosi 92.9 0.096 3.3E-06 48.8 5.0 34 163-196 4-37 (389)
404 1y56_B Sarcosine oxidase; dehy 92.9 0.1 3.5E-06 48.5 5.1 34 162-195 5-38 (382)
405 4gx0_A TRKA domain protein; me 92.9 0.24 8.1E-06 48.9 7.9 169 3-200 125-386 (565)
406 3l4b_C TRKA K+ channel protien 92.8 0.11 3.6E-06 44.3 4.6 31 7-40 2-32 (218)
407 1s3e_A Amine oxidase [flavin-c 92.6 0.12 4E-06 50.5 5.3 61 162-223 4-81 (520)
408 1c0p_A D-amino acid oxidase; a 92.6 0.12 3.9E-06 47.8 5.0 33 162-194 6-38 (363)
409 1bg6_A N-(1-D-carboxylethyl)-L 92.6 0.12 4E-06 47.8 5.0 36 1-40 1-36 (359)
410 1rsg_A FMS1 protein; FAD bindi 92.5 0.11 3.9E-06 50.6 4.9 36 162-197 8-44 (516)
411 3nyc_A D-arginine dehydrogenas 92.5 0.12 4.1E-06 47.9 4.9 35 162-197 9-43 (381)
412 3hn2_A 2-dehydropantoate 2-red 92.5 0.24 8.1E-06 44.7 6.7 83 163-267 3-86 (312)
413 1id1_A Putative potassium chan 92.4 0.2 6.9E-06 39.7 5.6 34 161-194 2-35 (153)
414 1kyq_A Met8P, siroheme biosynt 92.4 0.067 2.3E-06 47.1 2.8 33 5-40 13-45 (274)
415 2x5o_A UDP-N-acetylmuramoylala 92.3 0.09 3.1E-06 50.1 3.9 129 5-192 5-137 (439)
416 2ivd_A PPO, PPOX, protoporphyr 92.3 0.13 4.5E-06 49.5 5.2 37 161-197 15-51 (478)
417 3k96_A Glycerol-3-phosphate de 92.1 0.17 5.7E-06 46.7 5.3 37 1-40 25-61 (356)
418 3i6d_A Protoporphyrinogen oxid 92.1 0.071 2.4E-06 51.1 2.9 35 163-197 6-46 (470)
419 3hwr_A 2-dehydropantoate 2-red 91.9 0.48 1.6E-05 42.8 8.1 31 161-191 18-48 (318)
420 1sez_A Protoporphyrinogen oxid 91.9 0.17 5.7E-06 49.1 5.3 36 162-197 13-48 (504)
421 2i0z_A NAD(FAD)-utilizing dehy 91.8 0.17 5.9E-06 48.3 5.3 34 163-196 27-60 (447)
422 1f0y_A HCDH, L-3-hydroxyacyl-C 91.8 0.19 6.5E-06 45.1 5.3 33 5-40 15-47 (302)
423 3dje_A Fructosyl amine: oxygen 91.8 0.16 5.6E-06 48.2 5.1 35 162-196 6-41 (438)
424 2bi7_A UDP-galactopyranose mut 91.8 0.16 5.6E-06 47.3 4.9 35 163-197 4-38 (384)
425 1vl6_A Malate oxidoreductase; 91.7 0.18 6.2E-06 46.4 4.9 34 5-40 192-225 (388)
426 2ewd_A Lactate dehydrogenase,; 91.6 0.19 6.5E-06 45.5 5.1 37 2-40 1-37 (317)
427 2yg5_A Putrescine oxidase; oxi 91.6 0.18 6E-06 48.2 5.1 35 163-197 6-40 (453)
428 2a9f_A Putative malic enzyme ( 91.5 0.18 6.2E-06 46.4 4.8 34 5-40 188-221 (398)
429 3hdq_A UDP-galactopyranose mut 91.5 0.19 6.5E-06 47.0 5.1 35 162-196 29-63 (397)
430 2gag_B Heterotetrameric sarcos 91.5 0.14 4.8E-06 48.0 4.3 33 163-195 22-56 (405)
431 3hn7_A UDP-N-acetylmuramate-L- 91.5 0.33 1.1E-05 47.3 7.0 79 161-267 18-97 (524)
432 4dio_A NAD(P) transhydrogenase 91.5 0.18 6.2E-06 46.9 4.8 33 5-40 190-222 (405)
433 2e4g_A Tryptophan halogenase; 91.5 0.2 6.7E-06 49.3 5.4 34 162-195 25-61 (550)
434 2uyy_A N-PAC protein; long-cha 91.4 0.27 9.2E-06 44.4 5.9 37 1-40 26-62 (316)
435 3pvc_A TRNA 5-methylaminomethy 91.4 0.2 6.8E-06 50.8 5.4 33 163-195 265-297 (689)
436 1t2d_A LDH-P, L-lactate dehydr 91.3 0.22 7.6E-06 45.1 5.2 35 4-40 3-37 (322)
437 2vvm_A Monoamine oxidase N; FA 91.3 0.18 6.3E-06 48.7 5.0 36 162-197 39-74 (495)
438 4huj_A Uncharacterized protein 91.3 0.15 5.1E-06 43.5 3.8 33 5-40 23-56 (220)
439 3ps9_A TRNA 5-methylaminomethy 91.3 0.2 6.8E-06 50.7 5.3 33 163-195 273-305 (676)
440 3mog_A Probable 3-hydroxybutyr 91.3 0.23 8E-06 47.7 5.5 37 1-40 1-37 (483)
441 3llv_A Exopolyphosphatase-rela 91.2 0.22 7.5E-06 38.8 4.5 33 162-194 6-38 (141)
442 3g3e_A D-amino-acid oxidase; F 91.2 0.14 4.7E-06 47.1 3.7 32 164-195 2-39 (351)
443 3fwz_A Inner membrane protein 91.1 0.22 7.6E-06 38.8 4.4 77 162-262 7-83 (140)
444 1pzg_A LDH, lactate dehydrogen 91.0 0.25 8.6E-06 45.0 5.3 32 6-40 10-42 (331)
445 3p2y_A Alanine dehydrogenase/p 91.0 0.22 7.7E-06 45.9 4.9 33 5-40 184-216 (381)
446 1v0j_A UDP-galactopyranose mut 91.0 0.22 7.5E-06 46.7 5.0 36 162-197 7-43 (399)
447 1jw9_B Molybdopterin biosynthe 91.0 0.26 8.9E-06 42.8 5.1 34 5-40 31-64 (249)
448 3i83_A 2-dehydropantoate 2-red 91.0 0.22 7.6E-06 45.1 4.9 32 6-40 3-34 (320)
449 2rgh_A Alpha-glycerophosphate 90.8 0.23 8E-06 49.0 5.1 34 162-195 32-65 (571)
450 4ffl_A PYLC; amino acid, biosy 90.8 0.31 1E-05 45.0 5.7 32 6-40 2-33 (363)
451 1kyq_A Met8P, siroheme biosynt 90.8 0.18 6E-06 44.4 3.8 34 161-194 12-45 (274)
452 4e21_A 6-phosphogluconate dehy 90.7 0.25 8.5E-06 45.5 5.0 36 2-40 19-54 (358)
453 3hn2_A 2-dehydropantoate 2-red 90.7 0.22 7.7E-06 44.9 4.6 32 6-40 3-34 (312)
454 1i8t_A UDP-galactopyranose mut 90.5 0.23 7.9E-06 46.0 4.6 33 164-196 3-35 (367)
455 1lss_A TRK system potassium up 90.5 0.34 1.2E-05 37.4 5.0 32 162-193 4-35 (140)
456 2z3y_A Lysine-specific histone 90.5 0.28 9.7E-06 49.4 5.5 36 161-196 106-141 (662)
457 3lov_A Protoporphyrinogen oxid 90.5 0.21 7.3E-06 47.9 4.5 36 162-197 4-41 (475)
458 3ghy_A Ketopantoate reductase 90.5 0.31 1E-05 44.5 5.3 33 5-40 3-35 (335)
459 3ado_A Lambda-crystallin; L-gu 90.3 0.2 6.9E-06 45.2 3.9 35 162-196 6-40 (319)
460 2xag_A Lysine-specific histone 90.3 0.3 1E-05 50.5 5.6 35 162-196 278-312 (852)
461 2weu_A Tryptophan 5-halogenase 90.3 0.17 5.7E-06 49.3 3.6 33 163-195 3-38 (511)
462 2hmt_A YUAA protein; RCK, KTN, 90.3 0.32 1.1E-05 37.8 4.6 34 161-194 5-38 (144)
463 2ew2_A 2-dehydropantoate 2-red 90.3 0.28 9.5E-06 44.2 4.8 32 6-40 4-35 (316)
464 3qha_A Putative oxidoreductase 90.3 0.21 7.3E-06 44.7 4.0 33 5-40 15-47 (296)
465 3ego_A Probable 2-dehydropanto 90.2 0.71 2.4E-05 41.5 7.5 74 162-258 2-75 (307)
466 3ic5_A Putative saccharopine d 90.2 0.3 1E-05 36.4 4.2 33 162-194 5-38 (118)
467 3g17_A Similar to 2-dehydropan 90.2 0.26 8.7E-06 44.1 4.4 32 6-40 3-34 (294)
468 4ezb_A Uncharacterized conserv 90.1 0.46 1.6E-05 42.9 6.2 92 163-281 25-119 (317)
469 3d0o_A L-LDH 1, L-lactate dehy 89.7 0.43 1.5E-05 43.1 5.6 36 4-40 5-40 (317)
470 3h8v_A Ubiquitin-like modifier 89.7 0.39 1.3E-05 42.6 5.1 34 5-40 36-69 (292)
471 1ez4_A Lactate dehydrogenase; 89.7 0.45 1.5E-05 43.0 5.6 38 2-40 2-39 (318)
472 3da1_A Glycerol-3-phosphate de 89.6 0.3 1E-05 48.1 4.8 34 162-195 18-51 (561)
473 1x13_A NAD(P) transhydrogenase 89.5 0.34 1.2E-05 45.4 4.8 33 5-40 172-204 (401)
474 4dsg_A UDP-galactopyranose mut 89.5 0.4 1.4E-05 46.2 5.5 36 162-197 9-45 (484)
475 1lld_A L-lactate dehydrogenase 89.5 0.37 1.3E-05 43.6 5.0 34 6-40 8-41 (319)
476 3orq_A N5-carboxyaminoimidazol 89.3 0.43 1.5E-05 44.4 5.4 33 5-40 12-44 (377)
477 3l9w_A Glutathione-regulated p 89.2 0.42 1.4E-05 44.9 5.3 33 5-40 4-36 (413)
478 1u8x_X Maltose-6'-phosphate gl 89.2 0.26 8.8E-06 47.1 3.8 40 1-40 24-66 (472)
479 4at0_A 3-ketosteroid-delta4-5a 89.2 0.38 1.3E-05 46.7 5.2 33 164-196 43-75 (510)
480 3rui_A Ubiquitin-like modifier 89.1 0.5 1.7E-05 42.9 5.4 34 5-40 34-67 (340)
481 3q2o_A Phosphoribosylaminoimid 89.1 0.59 2E-05 43.6 6.2 33 5-40 14-46 (389)
482 3dhn_A NAD-dependent epimerase 89.0 0.33 1.1E-05 41.2 4.1 33 5-40 4-37 (227)
483 1b37_A Protein (polyamine oxid 89.0 0.5 1.7E-05 45.3 5.8 34 4-40 3-37 (472)
484 3gpi_A NAD-dependent epimerase 89.0 0.5 1.7E-05 41.7 5.4 33 5-40 3-35 (286)
485 3ius_A Uncharacterized conserv 88.9 0.35 1.2E-05 42.7 4.4 32 6-40 6-37 (286)
486 3qsg_A NAD-binding phosphogluc 88.9 0.6 2E-05 42.1 5.9 33 162-194 24-57 (312)
487 1pjq_A CYSG, siroheme synthase 88.9 0.38 1.3E-05 46.0 4.7 33 5-40 12-44 (457)
488 3axb_A Putative oxidoreductase 88.8 0.22 7.6E-06 47.4 3.2 31 163-193 24-55 (448)
489 1pjc_A Protein (L-alanine dehy 88.8 0.41 1.4E-05 44.2 4.8 32 6-40 168-199 (361)
490 1l7d_A Nicotinamide nucleotide 88.7 0.42 1.4E-05 44.5 4.8 33 5-40 172-204 (384)
491 2qyt_A 2-dehydropantoate 2-red 88.6 0.32 1.1E-05 43.9 3.9 33 5-40 8-46 (317)
492 3enk_A UDP-glucose 4-epimerase 88.6 0.5 1.7E-05 42.9 5.3 37 1-40 1-38 (341)
493 3qsg_A NAD-binding phosphogluc 88.5 0.42 1.4E-05 43.1 4.6 33 5-40 24-57 (312)
494 3fi9_A Malate dehydrogenase; s 88.5 0.67 2.3E-05 42.3 5.9 35 5-40 8-43 (343)
495 2dpo_A L-gulonate 3-dehydrogen 88.4 0.56 1.9E-05 42.3 5.4 33 5-40 6-38 (319)
496 1ur5_A Malate dehydrogenase; o 88.4 0.5 1.7E-05 42.5 5.0 33 6-40 3-35 (309)
497 3gg2_A Sugar dehydrogenase, UD 88.4 0.46 1.6E-05 45.2 5.0 32 6-40 3-34 (450)
498 3ado_A Lambda-crystallin; L-gu 88.2 0.58 2E-05 42.1 5.3 32 6-40 7-38 (319)
499 3g0o_A 3-hydroxyisobutyrate de 88.2 0.51 1.7E-05 42.3 5.0 33 5-40 7-39 (303)
500 1zud_1 Adenylyltransferase THI 88.2 0.53 1.8E-05 40.9 4.9 34 5-40 28-61 (251)
No 1
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.6e-56 Score=431.06 Aligned_cols=400 Identities=31% Similarity=0.499 Sum_probs=344.8
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
+++||||||||+||++||.+|++.|+ ..+|+|+|++ ..+|.++.+++.++...... ........+++.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~----------~~~~~~~~~~~~ 76 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGF-EGRVLVIGREPEIPYERPPLSKEYLAREKTF----------ERICIRPAQFWE 76 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CSCEEEEESSSSCCBCSGGGGTTTTTTSSCS----------GGGBSSCHHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHccCc-CCCEEEEecCCCCCcCcccCCHHHHcCCCCH----------HHhccCCHHHHH
Confidence 35899999999999999999999986 4679999999 78888887776555332111 011245678888
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCC
Q 013952 83 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 162 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 162 (433)
+.+++++.++.+..+++..+.|.+.+++++.||+||+|||+.|+.|+ ++|.+..+++++++..++..+...+.. .+
T Consensus 77 ~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~---i~g~~~~~v~~~~~~~d~~~l~~~~~~-~~ 152 (415)
T 3lxd_A 77 DKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLS---CVGADLAGVHAVRTKEDADRLMAELDA-GA 152 (415)
T ss_dssp HTTEEEEETCCEEEEETTTTEEEETTSCEEEEEEEEECCCEECCCCB---TTSSCCBTEECCCSHHHHHHHHHHHHT-TC
T ss_pred HCCcEEEeCCEEEEEECCCCEEEECCCCEEEeeEEEEccCCccCCCC---CCCccccCEEEEcCHHHHHHHHHHhhh-cC
Confidence 99999999999999999999999999999999999999999998887 577777889999999999888877752 27
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK 242 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~ 242 (433)
++++|||+|++|+|+|..+.+.|.+|+++++.+.++++.+++++.+.+.+.+++.||++++++.|+++.. +++++..|.
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~ 231 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVR 231 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEE
Confidence 8999999999999999999999999999999999998778999999999999999999999999999987 456777899
Q ss_pred eCCCcEEECCEEEEcccCccChhhhh-cccccCCCcEEeCCCCCCCCCCeEEcCcccccccccc-CcccccccHHHHHHH
Q 013952 243 LKDGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLY-REMRRVEHVDHARKS 320 (433)
Q Consensus 243 ~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~-~~~~~~~~~~~A~~~ 320 (433)
+.+|++++||.||+|+|++|+++++. .++..++ +|.||+++||+.|+|||+|||+..+...+ |.+.+.++|..|..|
T Consensus 232 l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~-gi~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~q 310 (415)
T 3lxd_A 232 MQDGSVIPADIVIVGIGIVPCVGALISAGASGGN-GVDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDM 310 (415)
T ss_dssp ESSSCEEECSEEEECSCCEESCHHHHHTTCCCSS-SEECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHH
T ss_pred eCCCCEEEcCEEEECCCCccChHHHHhCCCCcCC-CEEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHH
Confidence 99999999999999999999998774 3566564 59999999999999999999999988666 777788899999999
Q ss_pred HHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCC--cEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecC
Q 013952 321 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESG 398 (433)
Q Consensus 321 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~ 398 (433)
|+.||+||++.. .+|..+|++|+.++++.++.+|...+ +.+..++.. ...|.++++++|+|+|+.++|
T Consensus 311 g~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~- 380 (415)
T 3lxd_A 311 ATAAAKDICGAP-----VPYKATPWFWSNQYDLKLQTVGLSTGHDNAVLRGDPA----TRSFSVVYLKGGKVVALDCVN- 380 (415)
T ss_dssp HHHHHHHHTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEEGG----GTEEEEEEEETTEEEEEEEES-
T ss_pred HHHHHHHhcCCC-----CCCCCCCeeEeeeCCcEEEEEeCCCCCCEEEEEecCC----CCeEEEEEEECCEEEEEEEEC-
Confidence 999999999753 57889999999999999999998764 344555543 567999999999999999997
Q ss_pred ChHHHHHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 399 TPEENKAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
...+...+..+|+++.++ +.+.|.++.+++.+
T Consensus 381 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~~ 412 (415)
T 3lxd_A 381 MVKDYVQGKKLVEARAQI-APEQLADAGVPLKE 412 (415)
T ss_dssp CHHHHHHHHHHHHHTCCC-CHHHHTCTTSCGGG
T ss_pred ChHHHHHHHHHHHCCCCC-CHHHhcCCCCChHH
Confidence 677788899999999888 47788998887654
No 2
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=3.4e-56 Score=428.92 Aligned_cols=394 Identities=25% Similarity=0.398 Sum_probs=338.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
+||+|||||+||++||.+|++.|+ ..+|+|||++ ..+|.++.+++.++....... .. ....+++.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~-~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~----------~~-~~~~~~~~~~ 70 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGF-EGRISLIGDEPHLPYDRPSLSKAVLDGSLERP----------PI-LAEADWYGEA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEECSSSSSBCSGGGGTHHHHTSSSSC----------CB-SSCTTHHHHT
T ss_pred CCEEEEcccHHHHHHHHHHHccCc-CCeEEEEECCCCCCcCCccccHHHhCCCCCHH----------Hh-cCCHHHHHHC
Confidence 599999999999999999999986 5779999999 888988888775543321111 11 2346778889
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCc
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGK 164 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 164 (433)
+++++.++++..+++..++|.+.+++++.||+||+|||+.|+.|+ +||.+..+++++++..++..+.+.+. .+++
T Consensus 71 ~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~---ipG~~~~~v~~~~~~~d~~~l~~~~~--~~~~ 145 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMA---LPGSQLPGVVTLRTYGDVQVLRDSWT--SATR 145 (410)
T ss_dssp TCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC---CTTTTSTTEECCCSHHHHHHHHHHCC--TTCE
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCC---CCCccccceEEeccHHHHHHHHHHhc--cCCe
Confidence 999999999999999999999999999999999999999998887 67777788999999999888877554 4789
Q ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013952 165 AVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK 244 (433)
Q Consensus 165 v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~ 244 (433)
++|||+|++|+|+|..|.+.|.+|+++++.+.++++.+++++.+.+.+.+++.||++++++.|+++.. ++.+..|.+.
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~ 223 (410)
T 3ef6_A 146 LLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMAS 223 (410)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHHHCHHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEEC
Confidence 99999999999999999999999999999999887667999999999999999999999999999987 4466789999
Q ss_pred CCcEEECCEEEEcccCccChhhhh-cccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHH
Q 013952 245 DGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 323 (433)
Q Consensus 245 ~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~ 323 (433)
+|+++++|.||+|+|++|++++++ .++..+ ++|.||+++||+.|+|||+|||+..+... +.+.+.++|..|..||+.
T Consensus 224 dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~-~gi~vd~~~~t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~ 301 (410)
T 3ef6_A 224 DGRSFVADSALICVGAEPADQLARQAGLACD-RGVIVDHCGATLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAA 301 (410)
T ss_dssp TSCEEECSEEEECSCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHH
T ss_pred CCCEEEcCEEEEeeCCeecHHHHHhCCCccC-CeEEEccCeeECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHH
Confidence 999999999999999999998774 456666 55999999999999999999999988765 666667899999999999
Q ss_pred HHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCC--cEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecCChH
Q 013952 324 AVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPE 401 (433)
Q Consensus 324 aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~ 401 (433)
||+||++.. .+|..+|++|+.++++.+..+|...+ +.+..++.. ...|.++++++|+|+|++++| ...
T Consensus 302 aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~g~~~~~-~~~ 371 (410)
T 3ef6_A 302 VAAAILGKN-----VSAPQLPVSWTEIAGHRMQMAGDIEGPGDFVSRGMPG----SGAALLFRLQERRIQAVVAVD-APR 371 (410)
T ss_dssp HHHHHTTCC-----CCCCBCCEEEEEETTEEEEEESCSSSSSEEEEESCTT----SSSEEEEEEETTEEEEEEEES-CHH
T ss_pred HHHHHcCCC-----CCCCCCCeeEEEECCceEEEEcCCCCCCEEEEEeeCC----CCeEEEEEEECCEEEEEEEEC-ChH
Confidence 999999753 67888999999999999999998764 345555544 567899999999999999998 577
Q ss_pred HHHHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 402 ENKAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
+...+..+|+++.++ +.+.|.++.+++.+
T Consensus 372 ~~~~~~~~i~~~~~~-~~~~l~~~~~~l~~ 400 (410)
T 3ef6_A 372 DFALATRLVEARAAI-EPARLADLSNSMRD 400 (410)
T ss_dssp HHHHHHHHHHHTCBC-CHHHHHCTTSCGGG
T ss_pred HHHHHHHHHhCCCCC-CHHHhcCCCCCHHH
Confidence 788899999999887 45788888887654
No 3
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3e-55 Score=421.97 Aligned_cols=395 Identities=29% Similarity=0.460 Sum_probs=342.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
+||+|||||+||++||.+|++.|+ ..+|+|||++ ..+|.++.+++.++...... ........+++.+.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~-~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~----------~~~~~~~~~~~~~~ 70 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKY-PGRIALINDEKHLPYQRPPLSKAYLKSGGDP----------NSLMFRPEKFFQDQ 70 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CSCEEEECCSSSSSBCSGGGGTGGGGSCCCT----------TSSBSSCHHHHHHT
T ss_pred CCEEEEcChHHHHHHHHHHHhhCc-CCCEEEEeCCCCCCCCCccCCHHHHCCCCCH----------HHccCCCHHHHHhC
Confidence 689999999999999999999997 3459999999 78898888876665432111 11134567888899
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCc
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGK 164 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 164 (433)
+++++. .++..++++.+.+.+.+++++.||+||+|||+.|+.|+ +||.+..+++++++..++..+...+. .+++
T Consensus 71 ~i~~~~-~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~---i~g~~~~~v~~~~~~~d~~~l~~~~~--~~~~ 144 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLD---VPNASLPDVLYLRTLDESEVLRQRMP--DKKH 144 (404)
T ss_dssp TEEEEC-CCEEEEETTTTEEEESSSCEEECSEEEECCCEEECCCC---STTTTSTTEECCSSHHHHHHHHHHGG--GCSE
T ss_pred CCEEEE-EEEEEEECCCCEEEECCCCEEECCEEEEeeCCCccCCC---CCCCCCCcEEEECCHHHHHHHHHHhh--cCCe
Confidence 999999 89999999999999999999999999999999998877 57777788999999999988877765 4789
Q ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013952 165 AVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK 244 (433)
Q Consensus 165 v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~ 244 (433)
++|||+|++|+|+|..+.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||++++++.|.++.. +++++..|.+.
T Consensus 145 vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~V~~~ 223 (404)
T 3fg2_P 145 VVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAA-EGDRVTGVVLS 223 (404)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEe-cCCcEEEEEeC
Confidence 99999999999999999999999999999999988778999999999999999999999999999987 45677789999
Q ss_pred CCcEEECCEEEEcccCccChhhhh-cccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHH
Q 013952 245 DGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 323 (433)
Q Consensus 245 ~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~ 323 (433)
+|+++++|.||+|+|++|++++++ .++..++| |.||+++||+.|+|||+|||+..+...+|.+.+.+++..|..||+.
T Consensus 224 dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~G-i~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~ 302 (404)
T 3fg2_P 224 DGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAG-IIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARC 302 (404)
T ss_dssp TSCEEECSEEEECCCEEECCHHHHHTTCCBSSS-EEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHH
T ss_pred CCCEEEcCEEEECcCCccCHHHHHhCCCCCCCC-EEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHH
Confidence 999999999999999999998774 45666654 9999999999999999999999988777877778899999999999
Q ss_pred HHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCC--cEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecCChH
Q 013952 324 AVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--DTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPE 401 (433)
Q Consensus 324 aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~ 401 (433)
||+||++.. .+|..+|++|+.++++.++.+|...+ +.+..++.. ...|.++++++|+|+|+.++| ...
T Consensus 303 aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~-~~~ 372 (404)
T 3fg2_P 303 VAARLTGDA-----KPYDGYPWFWSDQGDDKLQIVGLTAGFDQVVIRGSVA----ERSFSAFCYKAGKLIGIESVN-RAA 372 (404)
T ss_dssp HHHHTTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCCEEEEEEETT----TTEEEEEEEETTEEEEEEEES-CHH
T ss_pred HHHHhCCCC-----CCCCCCCceEeEECCcEEEEEeCCCCCCEEEEEecCC----CCcEEEEEEECCEEEEEEEeC-CHH
Confidence 999999753 57889999999999999999998754 345555544 567999999999999999997 668
Q ss_pred HHHHHHHHHHcCCCCCChhhhcccCCCcc
Q 013952 402 ENKAIAKVARVQPSVESLDVLKNEGLSFA 430 (433)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (433)
+...+..+|+++.++ +.+.|.++.+++.
T Consensus 373 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 400 (404)
T 3fg2_P 373 DHVFGRKILPLDKSV-TPEQAADLSFDLK 400 (404)
T ss_dssp HHHHHHHHTTTTCCC-CHHHHHCTTSCHH
T ss_pred HHHHHHHHHHcCCCC-CHHHhcCCCCChH
Confidence 889999999999888 4678888888764
No 4
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=3.5e-55 Score=424.26 Aligned_cols=400 Identities=18% Similarity=0.224 Sum_probs=313.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.+|||||||+||++||.+|++.|. +.+|+|||++ ..+|.+|+++..+..... .... .......+++++.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~-----~~~~----~~~~~~~~~~~~~ 70 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDK-ESDIIIFEKDRDMSFANCALPYVIGEVVE-----DRRY----ALAYTPEKFYDRK 70 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCS-SSCEEEEESSSCSSBCGGGHHHHHTTSSC-----CGGG----TBCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-CCcEEEEeCCCCCCCCcchhHHHHcCCcc-----chhh----hhhcCHHHHHHhc
Confidence 379999999999999999999985 4669999999 777777766532211100 0000 0112335677888
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCC-----cEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHh
Q 013952 85 GIELILSTEIVRADIASKTLLSATG-----LIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKA 159 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~-----~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~ 159 (433)
+++++.+++|..|+++.+.+.+.++ .++.||+||||||++|+.|+ +++ .+++..++..++..+.+.+..
T Consensus 71 ~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~---i~g---~~~~~~~~~~~~~~l~~~~~~ 144 (437)
T 4eqs_A 71 QITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLG---FES---DITFTLRNLEDTDAIDQFIKA 144 (437)
T ss_dssp CCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCC---CCC---TTEECCSSHHHHHHHHHHHHH
T ss_pred CCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccccc---ccC---ceEEeeccHHHHHHHHHhhhc
Confidence 9999999999999999988765332 36899999999999988765 454 678888999999998888776
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013952 160 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 239 (433)
Q Consensus 160 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 239 (433)
.++++++|||+|++|+|+|..+.+.|.+|+++++.+++++. +++++.+.+.+.++++||+++++++|++++. .
T Consensus 145 ~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~-~d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~------~ 217 (437)
T 4eqs_A 145 NQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL-MDADMNQPILDELDKREIPYRLNEEINAING------N 217 (437)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT-SCGGGGHHHHHHHHHTTCCEEESCCEEEEET------T
T ss_pred cCCcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc-ccchhHHHHHHHhhccceEEEeccEEEEecC------C
Confidence 67899999999999999999999999999999999999886 7999999999999999999999999999875 2
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhhh-ccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHH
Q 013952 240 EVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHA 317 (433)
Q Consensus 240 ~v~~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A 317 (433)
.+.+++|+++++|.|++|+|++||+++++ .++.. ++|+|.||++|||++|||||+|||++.++...+.+.+.+++..|
T Consensus 218 ~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A 297 (437)
T 4eqs_A 218 EITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGA 297 (437)
T ss_dssp EEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHH
T ss_pred eeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHH
Confidence 57889999999999999999999998875 45766 57889999999999999999999999998888877777899999
Q ss_pred HHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCCcE---------EEEcCCCc--cccCCcEEEEEE-
Q 013952 318 RKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGDT---------VLFGDNDL--ASATHKFGTYWI- 385 (433)
Q Consensus 318 ~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~--~~~~~~~~~~~~- 385 (433)
.+||+++|+||++.... ....+.+..+..+.+..+..+|+++.+. +....... ...+.+|.|+++
T Consensus 298 ~~~g~~~a~ni~g~~~~---~~~~~~~~~~~~~~~p~ia~vGlte~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~d 374 (437)
T 4eqs_A 298 HRAASIVAEQIAGNDTI---EFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYD 374 (437)
T ss_dssp HHHHHHHHHHHHSCTTC---CCCCBCCCEEEEETTEEEEEEESCGGGGGGSCEEEEEEEEESSCTTSSSCCEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCc---ccccceeEEeeeeccceEEEeeCCHHHHHhCCceEEEEecCCchhhcCCCCcEEEEEEEE
Confidence 99999999999986431 1122333333344555555668775321 11111111 123567888887
Q ss_pred -eCCEEEEEEEecCC-hHH-HHHHHHHHHcCCCCCChhhhccc-CCCccc
Q 013952 386 -KDGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVLKNE-GLSFAS 431 (433)
Q Consensus 386 -~~~~l~G~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 431 (433)
++++|||+|++|++ ++| |+.++.||++++|++||..+.-. -++|.+
T Consensus 375 ~~~~~ilGa~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~yhP~~s~ 424 (437)
T 4eqs_A 375 TSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAFAPPYSH 424 (437)
T ss_dssp TTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCC
T ss_pred CCCCEEEEEEEECcCCHHHHHHHHHHHHHcCCcHHHHhcCccccCCCCCc
Confidence 57999999999985 777 59999999999999977765433 244443
No 5
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=9.9e-54 Score=413.95 Aligned_cols=401 Identities=26% Similarity=0.425 Sum_probs=327.9
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHh
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 79 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (433)
|++ .+||+|||||+||+++|..|++.|+ ..+|+|||++ ..+|.++.+++.++....... .......+
T Consensus 1 M~~-~~~vvIIGgG~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~~~ 68 (431)
T 1q1r_A 1 MNA-NDNVVIVGTGLAGVEVAFGLRASGW-EGNIRLVGDATVIPHHLPPLSKAYLAGKATAE----------SLYLRTPD 68 (431)
T ss_dssp -CC-SCEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSCCSCCBCSGGGGTTTTTTCSCSG----------GGBSSCHH
T ss_pred CCC-CCcEEEEcCHHHHHHHHHHHHccCc-CCCEEEEECCCCCCCcCCCCcHHHhCCCCChH----------HhcccCHH
Confidence 543 5899999999999999999999986 3469999999 778877766665543221100 01123467
Q ss_pred HHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCC---EEEecCHHHHHHHHHH
Q 013952 80 WYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKN---IFYLREIDDADKLVEA 156 (433)
Q Consensus 80 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~---v~~~~~~~~~~~~~~~ 156 (433)
++++.+++++.++.|..++++.++|.+.+++++.||+||+|||++|+.|+ ++|.+..+ ++++.+..++..+.+.
T Consensus 69 ~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~~~~---i~G~~~~~~~~v~~~~~~~d~~~l~~~ 145 (431)
T 1q1r_A 69 AYAAQNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLP---VASGAVGKANNFRYLRTLEDAECIRRQ 145 (431)
T ss_dssp HHHHTTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCG---GGTTHHHHSTTEEESSSHHHHHHHHHT
T ss_pred HHHhCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCccCCC---CCCcccCCCceEEEECCHHHHHHHHHH
Confidence 78889999999999999999889999988889999999999999998887 56654334 8888898888777665
Q ss_pred HHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEec-CC
Q 013952 157 IKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN-AD 235 (433)
Q Consensus 157 ~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~-~~ 235 (433)
+. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||+++++++|.++..+ ++
T Consensus 146 l~--~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~ 223 (431)
T 1q1r_A 146 LI--ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ 223 (431)
T ss_dssp CC--TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT
T ss_pred hh--cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC
Confidence 43 4789999999999999999999999999999999998887789999999999999999999999999999852 24
Q ss_pred CcEEEEEeCCCcEEECCEEEEcccCccChhhhh-cccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccH
Q 013952 236 GEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHV 314 (433)
Q Consensus 236 g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~ 314 (433)
+++..+.+.+|+++++|.||+|+|++|++++++ .++..++ +|.||+++||+.|+|||+|||+..+.+.+|.+.+.+++
T Consensus 224 ~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~-gi~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~ 302 (431)
T 1q1r_A 224 QKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVDN-GIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESV 302 (431)
T ss_dssp CCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBSS-SEECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSH
T ss_pred CcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCCC-CEEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHH
Confidence 666688899999999999999999999998774 3566654 59999999999999999999999887666766677899
Q ss_pred HHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCCc--EEEEcCCCccccCCcEEEEEEeCCEEEE
Q 013952 315 DHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD--TVLFGDNDLASATHKFGTYWIKDGKVVG 392 (433)
Q Consensus 315 ~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G 392 (433)
..|..||+.+|.||.+.. .+|..+|++|+..++..+..+|.++.. .+..++.. ...|.+++.++|+|+|
T Consensus 303 ~~A~~qg~~aa~~i~g~~-----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~G 373 (431)
T 1q1r_A 303 PNALEQARKIAAILCGKV-----PRDEAAPWFWSDQYEIGLKMVGLSEGYDRIIVRGSLA----QPDFSVFYLQGDRVLA 373 (431)
T ss_dssp HHHHHHHHHHHHHHTTCC-----CCCCCCCEEEEEETTEEEEEEECCTTCSEEEEEEETT----TTEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHhcCCC-----CCCCCCCeEEEEECCceEEEEeCCCCCCEEEEEccCC----CCeEEEEEEeCCEEEE
Confidence 999999999999999753 467789999999999888888877642 33344322 4567888889999999
Q ss_pred EEEecCChHHHHHHHHHHHcCCCCCChhhhcccCCCcc
Q 013952 393 VFLESGTPEENKAIAKVARVQPSVESLDVLKNEGLSFA 430 (433)
Q Consensus 393 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (433)
++++|+. .+...+..+|..+.++ +...|.++.+++.
T Consensus 374 ~~~~g~~-~~~~~~~~~i~~~~~~-~~~~l~~~~~~~~ 409 (431)
T 1q1r_A 374 VDTVNRP-VEFNQSKQIITDRLPV-EPNLLGDESVPLK 409 (431)
T ss_dssp EEEESCH-HHHHHHHHHHHTTCCC-CHHHHTCTTSCHH
T ss_pred EEEECCh-HHHHHHHHHHHCCCCC-CHHHhhCCCCCHH
Confidence 9999854 5566677788888777 4567888877764
No 6
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=1.8e-53 Score=409.48 Aligned_cols=390 Identities=26% Similarity=0.432 Sum_probs=319.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
++||+|||||++|+++|.+|++.|. ..+|+|+|++ ..+|.++.+++.++....... ..+. ++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~-~~~~ 71 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGY-QGLITVVGDEAERPYDRPPLSKDFMAHGDAEK-------------IRLD-CKRA 71 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTC-CSCEEEEESSCSCCBCSGGGGTHHHHHCCGGG-------------SBCC-CTTS
T ss_pred CCcEEEECChHHHHHHHHHHHccCC-CCeEEEEECCCCCcccCCCCCHHHhCCCchhh-------------hhHH-HHHH
Confidence 5899999999999999999999986 3569999999 677877766654442211000 0111 4567
Q ss_pred CCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCC-CCCCCCCEEEecCHHHHHHHHHHHHhcCC
Q 013952 84 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGV-EGADAKNIFYLREIDDADKLVEAIKAKKN 162 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 162 (433)
.+++++.+++|..++++.++|.+.+++++.||+||+|||++|+.|+ + +|.+ ++++++.+..++..+.+.+. .+
T Consensus 72 ~~v~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~~~~~~---i~~G~~-~~v~~~~~~~~~~~l~~~~~--~~ 145 (408)
T 2gqw_A 72 PEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALP---TLQGAT-MPVHTLRTLEDARRIQAGLR--PQ 145 (408)
T ss_dssp CSCEEEETCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCG---GGTTCS-SCEEECCSHHHHHHHHTTCC--TT
T ss_pred CCCEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCC---ccCCCC-CcEEEECCHHHHHHHHHHhh--cC
Confidence 8999999988999999989999988889999999999999998877 5 6766 78999899988877765443 47
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK 242 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~ 242 (433)
++++|||+|++|+|+|..|.+.|.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|.+++ ++ .|.
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~---~~---~v~ 219 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV---DG---VVL 219 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE---TT---EEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE---CC---EEE
Confidence 899999999999999999999999999999999998866899999999999999999999999999997 23 577
Q ss_pred eCCCcEEECCEEEEcccCccChhhhh-cccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHH
Q 013952 243 LKDGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSA 321 (433)
Q Consensus 243 ~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g 321 (433)
+.+|+++++|.||+|+|++|++++++ .++..++| |.||+++||+.|+|||+|||+..+.+.+|.+.+.+++..|..||
T Consensus 220 ~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~~g-i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g 298 (408)
T 2gqw_A 220 LDDGTRIAADMVVVGIGVLANDALARAAGLACDDG-IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQG 298 (408)
T ss_dssp ETTSCEEECSEEEECSCEEECCHHHHHHTCCBSSS-EECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHH
T ss_pred ECCCCEEEcCEEEECcCCCccHHHHHhCCCCCCCC-EEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHH
Confidence 88998999999999999999998774 35666654 99999999999999999999998876566665667899999999
Q ss_pred HHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC-CcEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecCCh
Q 013952 322 EQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-GDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTP 400 (433)
Q Consensus 322 ~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~ 400 (433)
+.+|.||.+... ..|..+|++|+..++..+..+|... ++.+..++.. .....|.+++.++|+|+|++++|+.
T Consensus 299 ~~aa~~i~g~~~----~~~~~~p~~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~G~~~~g~~- 371 (408)
T 2gqw_A 299 IAVARHLVDPTA----PGYAELPWYWSDQGALRIQVAGLASGDEEIVRGEVS--LDAPKFTLIELQKGRIVGATCVNNA- 371 (408)
T ss_dssp HHHHHHHHCTTS----CCCCCCCEEEEEETTEEEEEEECSCCSEEEEESCCC--SSSCCEEEEEEETTEEEEEEEESCH-
T ss_pred HHHHHHhcCCCC----CcCCCCCeEEEEECCceEEEECCCCCCEEEEEccCC--CCCCeEEEEEEeCCEEEEEEEECCh-
Confidence 999999997531 2778899999999999888889721 2233333321 1135688888899999999999854
Q ss_pred HHHHHHHHHHHcCCCCCChhhhcccCCCcc
Q 013952 401 EENKAIAKVARVQPSVESLDVLKNEGLSFA 430 (433)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (433)
.++..+..+|+++.++. ...|.++.+++.
T Consensus 372 ~~~~~~~~~i~~~~~~~-~~~l~~~~~~~~ 400 (408)
T 2gqw_A 372 RDFAPLRRLLAVGAKPD-RAALADPATDLR 400 (408)
T ss_dssp HHHHHHHHHHHTTCCCC-HHHHHCTTCCHH
T ss_pred HHHHHHHHHHHCCCCCC-hHHhcCCCCCHH
Confidence 56899999999999884 457788877654
No 7
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.3e-53 Score=406.04 Aligned_cols=362 Identities=27% Similarity=0.362 Sum_probs=305.1
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
++.+|+|||||+||++||.+|++.+.+ |+|||++ ..+|.++.+++.+....... .......++++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~---itlie~~~~~~y~~~~l~~~l~g~~~~~-----------~l~~~~~~~~~ 73 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDD---ITMINSEKYLPYYRPRLNEIIAKNKSID-----------DILIKKNDWYE 73 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSC---EEEECSSSSCCBCGGGHHHHHHSCCCGG-----------GTBSSCHHHHH
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCE---EEEEECCCCCCcccChhhHHHcCCCCHH-----------HccCCCHHHHH
Confidence 357999999999999999999554544 9999999 77888888776432211111 11346788899
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCC
Q 013952 83 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 162 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 162 (433)
+.+++++.+++|..++++.++|++.+++++.||+||||||++|+.|+ +||.+ +++++++..++..+.+.+.. +
T Consensus 74 ~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~---i~G~~--~v~~~~~~~d~~~l~~~l~~--~ 146 (385)
T 3klj_A 74 KNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIK---VPHAD--EIFSLYSYDDALKIKDECKN--K 146 (385)
T ss_dssp HTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCC---CTTCS--CEECCSSHHHHHHHHHHHHH--H
T ss_pred HCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCC---CCCCC--CeEEeCCHHHHHHHHHHhhc--C
Confidence 99999999999999999999999999999999999999999998887 57765 89999999999998887763 6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK 242 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~ 242 (433)
++++|||+|++|+|+|..|.+.|.+|+++++.+.++++.+++++.+.+.+.+++.||++++++.+.++
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i------------ 214 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM------------ 214 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGC------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEc------------
Confidence 89999999999999999999999999999999999988789999999999999999999999888665
Q ss_pred eCCCcEEECCEEEEcccCccChhhhhc-ccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHH
Q 013952 243 LKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSA 321 (433)
Q Consensus 243 ~~~g~~i~~d~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g 321 (433)
|+++++|.||+|+|++|++++++. ++..++ +|.||++|||+.|+|||+|||+..+... ..++..|..||
T Consensus 215 ---g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~~-gi~vd~~~~t~~~~IyA~GD~a~~~~~~------~~~~~~A~~qg 284 (385)
T 3klj_A 215 ---GDLIRSSCVITAVGVKPNLDFIKDTEIASKR-GILVNDHMETSIKDIYACGDVAEFYGKN------PGLINIANKQG 284 (385)
T ss_dssp ---HHHHHHSEEEECCCEEECCGGGTTSCCCBSS-SEEECTTCBCSSTTEEECGGGEEETTBC------CCCHHHHHHHH
T ss_pred ---CeEEecCeEEECcCcccChhhhhhcCCCcCC-CEEECCCcccCCCCEEEEEeeEecCCCc------ccHHHHHHHHH
Confidence 457899999999999999988754 565554 4999999999999999999999876431 26789999999
Q ss_pred HHHHHHHhccCCCCCccCCCC-CCeEEEeecccceEEecCCCCc---EEEEcCCCccccCCcEEEEEEeCCEEEEEEEec
Q 013952 322 EQAVKTIMATEGGKTVTGYDY-LPYFYSRAFDLSWQFYGDNVGD---TVLFGDNDLASATHKFGTYWIKDGKVVGVFLES 397 (433)
Q Consensus 322 ~~aa~~i~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g 397 (433)
+.||.||++.. .+|.. +|++|+.+++..+..+|.++++ .+.. +. ....|.++++++|+|+|++++|
T Consensus 285 ~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~l~g~~~~g 354 (385)
T 3klj_A 285 EVAGLNACGED-----ASYSEIIPSPILKVSGISIISCGDIENNKPSKVFR-ST----QEDKYIVCMLKENKIDAAAVIG 354 (385)
T ss_dssp HHHHHHHTTCC-----CCCCCCCCCCEEEETTEEEEEESCCTTCCCSEEEE-EE----CSSCEEEEEEETTEEEEEEEES
T ss_pred HHHHHHhcCCC-----cCCCCCCCcEEEEeCCCcEEEEcCCCCCCCeEEEE-EC----CCCeEEEEEEECCEEEEEEEEC
Confidence 99999999754 45555 6999999999999999987643 2322 22 2568999999999999999998
Q ss_pred CChHHHHHHHHHHHcCCCCCCh
Q 013952 398 GTPEENKAIAKVARVQPSVESL 419 (433)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~ 419 (433)
+. .....+..+|+++.+++++
T Consensus 355 ~~-~~~~~~~~~i~~~~~~~~~ 375 (385)
T 3klj_A 355 DV-SLGTKLKKAIDSSKSFDNI 375 (385)
T ss_dssp CH-HHHHHHHHHHHTTCBCSCC
T ss_pred Cc-HHHHHHHHHHHcCCCcccc
Confidence 55 4445889999999999876
No 8
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.9e-53 Score=412.30 Aligned_cols=400 Identities=17% Similarity=0.221 Sum_probs=307.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
+||+|||||+||++||.+|++. +.+ |+|||++ ...|.++.+.. ++.. ..... ........+++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~---V~vie~~~~~g~~~~~~~~-~~~~-~~~~~--------~~~~~~~~~~~~ 69 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAE---ISLIDKQATVGYLSGGLSA-YFNH-TINEL--------HEARYITEEELR 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSE---EEEECSSSCCSSCCC--------------------------CCCCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCcccCccchh-hhcC-CCCCH--------HHhhcCCHHHHH
Confidence 5999999999999999999998 554 9999999 55554332221 1100 00000 111234677888
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeC---CCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHh
Q 013952 83 EKGIELILSTEIVRADIASKTLLSA---TGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKA 159 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~---~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~ 159 (433)
+.+++++.+++|..++++.+.+.+. ++.++.||++|+|||++|..|+ ++|.+..++++++++.+...+.+...
T Consensus 70 ~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~~- 145 (452)
T 3oc4_A 70 RQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQ---IRGSQTEKLLKYKFLSGALAAVPLLE- 145 (452)
T ss_dssp HTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCC---CBTTTCTTEEEGGGCC----CCHHHH-
T ss_pred HCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHh-
Confidence 9999999999999999999888663 4567999999999999998887 67777788998887777666555444
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013952 160 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 239 (433)
Q Consensus 160 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 239 (433)
.+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||+++++++|++++. .++.+
T Consensus 146 -~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v- 222 (452)
T 3oc4_A 146 -NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI- 222 (452)
T ss_dssp -TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-
T ss_pred -cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-
Confidence 579999999999999999999999999999999999998768999999999999999999999999999986 34454
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhhhccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHH
Q 013952 240 EVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHAR 318 (433)
Q Consensus 240 ~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~ 318 (433)
.+.+.++ ++++|.||+|+|++|+++++...+.. ++|+|.||++|||+.|+|||+|||++.+....+.+.+.+++..|.
T Consensus 223 ~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~ 301 (452)
T 3oc4_A 223 VLETSEQ-EISCDSGIFALNLHPQLAYLDKKIQRNLDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAV 301 (452)
T ss_dssp EEEESSC-EEEESEEEECSCCBCCCSSCCTTSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHH
T ss_pred EEEECCC-EEEeCEEEECcCCCCChHHHHhhhccCCCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHH
Confidence 7788777 89999999999999999988665555 578899999999999999999999998776666555567899999
Q ss_pred HHHHHHHHHHhccCCCCCccCCC-CCCeEEEeecccceEEecCCCCc------EEEEcCCC-----ccccCCcEEEEEE-
Q 013952 319 KSAEQAVKTIMATEGGKTVTGYD-YLPYFYSRAFDLSWQFYGDNVGD------TVLFGDND-----LASATHKFGTYWI- 385 (433)
Q Consensus 319 ~~g~~aa~~i~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~g~~~~~------~~~~~~~~-----~~~~~~~~~~~~~- 385 (433)
.||++||.||++... .+. ..+...+.+|+..+..+|+++.+ .+.....+ ....+.+|.|+++
T Consensus 302 ~~g~~aa~~i~g~~~-----~~~~~~~~~~~~~~~~~~a~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~kli~~ 376 (452)
T 3oc4_A 302 RTGLVVANNLEEKTH-----RFIGSLRTMGTKVGDYYLASTGLTETEGLFFPQTLASIIVRQPAPPLQHGTEILGKLIYD 376 (452)
T ss_dssp HHHHHHTTSSSSCCC-----CCCCCCCCEEEEETTEEEEEEECCSGGGGGSSSCEEEEEEEEECTTTTCSCEEEEEEEEE
T ss_pred HHHHHHHHHhcCCCc-----cCCCccccEEEEEcCeeEEEecCCHHHHHHCCCceEEEEEecCCccCCCCCeEEEEEEEE
Confidence 999999999987532 222 12234445566677777887632 12211111 1123568899888
Q ss_pred -eCCEEEEEEEecC-ChHHH-HHHHHHHHcCCCCCChhhh-cccCCCccc
Q 013952 386 -KDGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFAS 431 (433)
Q Consensus 386 -~~~~l~G~~~~g~-~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 431 (433)
++++|||+|++|+ +++|+ +.++.||++++|++||..+ .-+.++|++
T Consensus 377 ~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~ 426 (452)
T 3oc4_A 377 KVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTN 426 (452)
T ss_dssp TTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSC
T ss_pred CCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCC
Confidence 4699999999998 68874 9999999999999988876 345555554
No 9
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=9e-53 Score=412.85 Aligned_cols=404 Identities=23% Similarity=0.267 Sum_probs=300.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC-CCCCCCCCccccccCCCC-CCCCCCcccccCCCCCCCCHhH
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE-VAPYERPALSKAYLFPEG-TARLPGFHVCVGSGGERLLPEW 80 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 80 (433)
++||+|||||++|++||.+|++. |.+ |+|||++ ..+|.++.++..+..... ...+..++. . .....++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~---Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~----~-~~~~~~~ 74 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAH---VTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPY----N-VVRDPEF 74 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSE---EEEECCC------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCC---EEEEECCCcccccccccchhhcCCCCchHHhccccc----h-hccCHHH
Confidence 57999999999999999999998 554 9999999 655655433221100000 000000000 0 1122233
Q ss_pred H-HhCCcEEEeCceEEEEECCCCEEEeCC---Cc--EEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHH
Q 013952 81 Y-KEKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLV 154 (433)
Q Consensus 81 ~-~~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~ 154 (433)
+ ++.+++++.+++|..++++.+.+.+.+ +. ++.||+||+|||+.|..|+ ++|.+..+++++.+..++..+.
T Consensus 75 ~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~ 151 (472)
T 3iwa_A 75 FRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPP---VEGMDLAGVTPVTNLDEAEFVQ 151 (472)
T ss_dssp ------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCS---CTTTTSBTEEECCSHHHHHHHH
T ss_pred HhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCCC---CCCCCCCCEEEeCCHHHHHHHH
Confidence 3 357999999999999999999887754 55 7999999999999998887 5777667899999998888887
Q ss_pred HHHHhcCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEec
Q 013952 155 EAIKAKKNGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN 233 (433)
Q Consensus 155 ~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~-g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~ 233 (433)
+.+....+++++|||+|++|+|+|..|.+. |.+|+++++.+.++++.+++++.+.+.+.+++.||+++++++|.+++.
T Consensus 152 ~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~- 230 (472)
T 3iwa_A 152 HAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEG- 230 (472)
T ss_dssp HHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEE-
T ss_pred HHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEc-
Confidence 766544589999999999999999999999 999999999999988558999999999999999999999999999987
Q ss_pred CCCcEEEEEeCCCcEEECCEEEEcccCccChhhhh-ccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCccccc
Q 013952 234 ADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 311 (433)
Q Consensus 234 ~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~ 311 (433)
+++.+ .+.+.+|+++++|.||+|+|++|+++++. .++.. ++|+|.||+++||+.|+|||+|||+..+....|.+.+.
T Consensus 231 ~~~~v-~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~ 309 (472)
T 3iwa_A 231 ENGKV-ARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFF 309 (472)
T ss_dssp SSSBE-EEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECC
T ss_pred cCCeE-EEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCCCEEECCCcccCCCCEEEeccceecccccCCceeec
Confidence 34444 47788888999999999999999988774 35666 57899999999999999999999998887766666556
Q ss_pred ccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCCc------EEE---EcCCCcc----ccCC
Q 013952 312 EHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD------TVL---FGDNDLA----SATH 378 (433)
Q Consensus 312 ~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~------~~~---~~~~~~~----~~~~ 378 (433)
+++..|..||+++|+||.+... .....+|++++.+++..+..+|+++.+ .+. +...... ..+.
T Consensus 310 ~~~~~A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~a~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 385 (472)
T 3iwa_A 310 PLGSMANRQGRVIGTNLADGDA----TFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQFDRAHFYPEKTI 385 (472)
T ss_dssp CCTTHHHHHHHHHHHHHTTCCC----CCCCBCCCEEEECSSCEEEEEECCHHHHHHTTCCEEEEEEEC-----------C
T ss_pred chHHHHHHHHHHHHHHhcCCCc----cCCCCCcceEEEECCceeEEEECCHHHHHHcCCceEEEEEecCCccCccCCCce
Confidence 7888999999999999997542 223456778888888888888987621 121 1111111 2356
Q ss_pred cEEEEEE--eCCEEEEEEEecC---ChHH-HHHHHHHHHcCCCCCChhhhccc
Q 013952 379 KFGTYWI--KDGKVVGVFLESG---TPEE-NKAIAKVARVQPSVESLDVLKNE 425 (433)
Q Consensus 379 ~~~~~~~--~~~~l~G~~~~g~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 425 (433)
+|.|+++ ++++|||+|++|+ .++| ++.++.||++++|++||..+.-+
T Consensus 386 ~~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~ 438 (472)
T 3iwa_A 386 MTLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVV 438 (472)
T ss_dssp EEEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC
T ss_pred EEEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhccccc
Confidence 7889888 5899999999998 3356 59999999999999966655433
No 10
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=7.1e-53 Score=414.85 Aligned_cols=407 Identities=18% Similarity=0.247 Sum_probs=314.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
++||+|||||+||+++|..|++.|.+..+|+|||++ ...|..+.+.. ++... ..... .......+++++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~-~~~~~-~~~~~--------~~~~~~~~~~~~ 104 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMAL-WIGEQ-IAGPE--------GLFYSDKEELES 104 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHH-HHTTS-SSCSG--------GGBSCCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccch-hhcCc-cCCHH--------HhhhcCHHHHHh
Confidence 489999999999999999999987112339999999 44443332110 11100 00000 012345677888
Q ss_pred CCcEEEeCceEEEEECCCCEEEeC-CC--cEEecceEEEccCCCccccCCCCCCCCC-----------CCCEEEecCHHH
Q 013952 84 KGIELILSTEIVRADIASKTLLSA-TG--LIFKYQILVIATGSTVLRLTDFGVEGAD-----------AKNIFYLREIDD 149 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~~-~~--~~~~~d~lvlAtG~~~~~~~~~~~~g~~-----------~~~v~~~~~~~~ 149 (433)
.+++++.++++..++++.+.+.+. ++ .++.||+||+|||++|..|+ +||.+ .+++++++++.+
T Consensus 105 ~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~~~~~f~~~~~~v~~~~~~~~ 181 (490)
T 2bc0_A 105 LGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPILPP---IKGAEIKEGSLEFEATLENLQFVKLYQN 181 (490)
T ss_dssp TTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECCCS---CBTCCBCTTCTTCCBSSTTEEECSSHHH
T ss_pred CCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCCCC---CCCccccccccccccccCCEEEeCCHHH
Confidence 999999998999999988888776 53 57999999999999998887 56655 568999999988
Q ss_pred HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 150 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 150 ~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
...+.+.+....+++++|||+|++|+|+|..|++.|.+|+++++.+.+++..+++++.+.+.+.+++.||+++++++|++
T Consensus 182 ~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 261 (490)
T 2bc0_A 182 SADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKE 261 (490)
T ss_dssp HHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEE
T ss_pred HHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 88887766333689999999999999999999999999999999999988668999999999999999999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcc
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREM 308 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~ 308 (433)
+.. ++++..+.+ +|+++++|.||+|+|++|++++++..+.. ++|+|.||+++||+.|+|||+|||+..+....+.+
T Consensus 262 i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~ 338 (490)
T 2bc0_A 262 VAG--NGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGKIDLFRNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDT 338 (490)
T ss_dssp EEC--SSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTCSCBCTTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEE
T ss_pred EEc--CCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhhhccCCCCCEEECCCcccCCCCEEEeeeeEEeccccCCce
Confidence 986 555545666 66789999999999999999987655555 56889999999999999999999999876655655
Q ss_pred cccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCC------cEEEE---cCCCcc-----
Q 013952 309 RRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG------DTVLF---GDNDLA----- 374 (433)
Q Consensus 309 ~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~------~~~~~---~~~~~~----- 374 (433)
.+.+++..|..||+++|.||.+... ......|++++.+++..+..+|.++. ..+.. .+....
T Consensus 339 ~~~~~~~~A~~qg~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~ 414 (490)
T 2bc0_A 339 NYIALASNAVRTGIVAAHNACGTDL----EGIGVQGSNGISIYGLHMVSTGLTLEKAKRLGFDAAVTEYTDNQKPEFIEH 414 (490)
T ss_dssp ECCCCHHHHHHHHHHHHHHHTTCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTCCS
T ss_pred eecccHHHHHHHHHHHHHHhcCCCC----CCCCcccceEEEECCcEeEEeeCCHHHHHHcCCceEEEEEecCCcccccCC
Confidence 5567899999999999999987431 22234566777778888888887752 22221 111111
Q ss_pred ccCCcEEEEEE--eCCEEEEEEEecC-ChHHH-HHHHHHHHcCCCCCChhhh-cccCCCccc
Q 013952 375 SATHKFGTYWI--KDGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFAS 431 (433)
Q Consensus 375 ~~~~~~~~~~~--~~~~l~G~~~~g~-~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 431 (433)
....+|.|+++ ++++|+|+|++|+ .++|+ +.++.+|++++|++|+..+ .-+-+++++
T Consensus 415 ~~~~~~~kl~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e 476 (490)
T 2bc0_A 415 GNFPVTIKIVYDKDSRRILGAQMAAREDVSMGIHMFSLAIQEGVTIEKLALTDIFFLPHFNK 476 (490)
T ss_dssp SCCEEEEEEEEETTTCBEEEEEEEESSCCTTHHHHHHHHHHHTCBHHHHHHSCCCCCTTTCC
T ss_pred CCceEEEEEEEECCCCEEEEEEEEcCcCHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCc
Confidence 12347888877 4799999999998 67775 9999999999999988765 445555544
No 11
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.6e-52 Score=408.43 Aligned_cols=395 Identities=20% Similarity=0.236 Sum_probs=305.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHH-H
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-K 82 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 82 (433)
++||+|||||+||+++|.+|++.+. ..+|+|||++ ...+..+.+...+. .. .. .........+++ +
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~-~~~V~vie~~~~~~~~~~~~p~~~~-~~--~~--------~~~~~~~~~~~~~~ 70 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKP-EWDVKVFEATEWVSHAPCGIPYVVE-GL--ST--------PDKLMYYPPEVFIK 70 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSSCCC-----------------------------------CTHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCc-CCCEEEEECCCccccCCcCCccccC-CC--CC--------HHHhhhcCHHHHHH
Confidence 5899999999999999999999842 3449999999 44343322221100 00 00 001112233344 6
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCCC-cEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcC
Q 013952 83 EKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 161 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 161 (433)
+.+++++.+++|..+++..+.+.+.++ .++.||+||+|||+.|+.|+ ++|.+..++++..+..++..+.+.+....
T Consensus 71 ~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~~~~~~~~~~ 147 (449)
T 3kd9_A 71 KRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPA---IEGVNLKGVFTADLPPDALAIREYMEKYK 147 (449)
T ss_dssp HTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCS---CBTTTSTTEECSCSTHHHHHHHHHHSSSC
T ss_pred hcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHHhcC
Confidence 789999999999999988888887777 48999999999999998877 67777778998888888888888776556
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 241 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v 241 (433)
+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.+++. |++++++.+.++.. ++.+..+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~--~~~v~~v 224 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRSFDKEVTDILEEKLKKH-VNLRLQEITMKIEG--EERVEKV 224 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHTTT-SEEEESCCEEEEEC--SSSCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhC-cEEEeCCeEEEEec--cCcEEEE
Confidence 88999999999999999999999999999999999998768999999999999999 99999999999986 3344344
Q ss_pred EeCCCcEEECCEEEEcccCccChhhhh-ccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHH
Q 013952 242 KLKDGRTLEADIVVVGVGGRPLISLFK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARK 319 (433)
Q Consensus 242 ~~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~ 319 (433)
+.+++++++|.||+|+|++|++++++ .++.. ++|+|.||+++||+.|+|||+|||+..++...|.+.+.+++..|..
T Consensus 225 -~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~ 303 (449)
T 3kd9_A 225 -VTDAGEYKAELVILATGIKPNIELAKQLGVRIGETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNK 303 (449)
T ss_dssp -EETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHH
T ss_pred -EeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHH
Confidence 44667899999999999999998775 36666 5688999999999999999999999887766666555688999999
Q ss_pred HHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC------CcEEEEcCCC------cc-ccCCcEEEEEE-
Q 013952 320 SAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLFGDND------LA-SATHKFGTYWI- 385 (433)
Q Consensus 320 ~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~~~~~------~~-~~~~~~~~~~~- 385 (433)
||+++|+||++... ......|+.++.+++..+..+|+++ +..+...... .. ..+.+|.|+++
T Consensus 304 ~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~kli~~ 379 (449)
T 3kd9_A 304 MGYVAGSNIAGKEL----HFPGVLGTAVTKFMDVEIGKTGLTEMEALKEGYDVRTAFIKASTRPHYYPGGREIWLKGVVD 379 (449)
T ss_dssp HHHHHHHHHTTCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEEEEEEEE
T ss_pred HHHHHHHHhcCCCc----cCCCcccceEEEEcCcEEEEecCCHHHHHHCCCceEEEEEecCCccccCCCCceEEEEEEEE
Confidence 99999999997532 1223356667777787787788875 2222221111 00 23567899888
Q ss_pred -eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhh
Q 013952 386 -KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVL 422 (433)
Q Consensus 386 -~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 422 (433)
++++|||+|++|+.++|+ +.++.||++++|++||..+
T Consensus 380 ~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~ 418 (449)
T 3kd9_A 380 NETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFT 418 (449)
T ss_dssp TTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTC
T ss_pred CCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhc
Confidence 459999999999998885 9999999999999977655
No 12
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.6e-52 Score=408.93 Aligned_cols=404 Identities=20% Similarity=0.294 Sum_probs=314.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
+||+|||||++|+++|.+|++. |.+ |+|||++ ..+|..+.+.. ++... .... .. ........++++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~g~-~~~~-~~-----~~~~~~~~~~~~ 69 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDAD---VTAYEMNDNISFLSCGIAL-YLGKE-IKNN-DP-----RGLFYSSPEELS 69 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCE---EEEEESSSCCCBCGGGHHH-HHTTC-BGGG-CG-----GGGBSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCCcccccchh-hhcCC-cccC-CH-----HHhhhcCHHHHH
Confidence 5899999999999999999998 665 9999999 44554332110 11100 0000 00 011234567788
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCC-----CcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHH
Q 013952 83 EKGIELILSTEIVRADIASKTLLSAT-----GLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 157 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~-----~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 157 (433)
+.+++++.++.+..++++.+++.+.+ +.+++||++|+|||++|+.|+ ++|.+..++++++++.+...+.+..
T Consensus 70 ~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~ 146 (452)
T 2cdu_A 70 NLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVPP---IPGIDSSRVYLCKNYNDAKKLFEEA 146 (452)
T ss_dssp HTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTTTSTTEEECSSHHHHHHHHHHG
T ss_pred HcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCCC---CCCCCCCCEEEeCcHHHHHHHHHHh
Confidence 89999999888999998888887754 457999999999999998877 5776667899999998888887765
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc
Q 013952 158 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 237 (433)
Q Consensus 158 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~ 237 (433)
. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||+++++++|+++.. ++++
T Consensus 147 ~--~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~ 223 (452)
T 2cdu_A 147 P--KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDE 223 (452)
T ss_dssp G--GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTE
T ss_pred c--cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCe
Confidence 4 589999999999999999999999999999999999988668999999999999999999999999999986 3555
Q ss_pred EEEEEeCCCcEEECCEEEEcccCccChhhhhccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHH
Q 013952 238 VKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDH 316 (433)
Q Consensus 238 ~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~ 316 (433)
+..+.+ +|+++++|.||+|+|++|++++++..+.. ++|+|.||++|||+.|+|||+|||+..+....+.+.+.+++..
T Consensus 224 v~~v~~-~g~~i~~D~vv~a~G~~p~~~ll~~~l~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~ 302 (452)
T 2cdu_A 224 IITKTL-DGKEIKSDIAILCIGFRPNTELLKGKVAMLDNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATN 302 (452)
T ss_dssp EEEEET-TSCEEEESEEEECCCEEECCGGGTTTSCBCTTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHH
T ss_pred EEEEEe-CCCEEECCEEEECcCCCCCHHHHHHhhhcCCCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHH
Confidence 545655 67889999999999999999987655555 5688999999999999999999999987666665555678999
Q ss_pred HHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCCc------EEE---EcCCCcc----ccCCcEEEE
Q 013952 317 ARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD------TVL---FGDNDLA----SATHKFGTY 383 (433)
Q Consensus 317 A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~------~~~---~~~~~~~----~~~~~~~~~ 383 (433)
|..||+++|.||.+... ....+.|++++.+++..+..+|.++.+ .+. +.+.... ....+|.|+
T Consensus 303 A~~~g~~aa~~i~g~~~----~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k~ 378 (452)
T 2cdu_A 303 AVRQGRLVGLNLTEDKV----KDMGTQSSSGLKLYGRTYVSTGINTALAKANNLKVSEVIIADNYRPEFMLSTDEVLMSL 378 (452)
T ss_dssp HHHHHHHHHHTSSSCCC----CCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTBSCCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCC----cCCCccceEEEEECCeeeEeecCCHHHHHHcCCceEEEEEecCCccccCCCCceEEEEE
Confidence 99999999999986431 222345677788888888888977521 111 1111111 123468888
Q ss_pred EE--eCCEEEEEEEecC-ChHHH-HHHHHHHHcCCCCCChhhh-cccCCCccc
Q 013952 384 WI--KDGKVVGVFLESG-TPEEN-KAIAKVARVQPSVESLDVL-KNEGLSFAS 431 (433)
Q Consensus 384 ~~--~~~~l~G~~~~g~-~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 431 (433)
++ ++++|+|+|++|+ .++++ +.++.+|++++|++|+..+ .-+-++|++
T Consensus 379 ~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e 431 (452)
T 2cdu_A 379 VYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDR 431 (452)
T ss_dssp EECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCC
T ss_pred EEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCc
Confidence 87 4799999999998 78775 9999999999999988765 444555543
No 13
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.5e-50 Score=407.44 Aligned_cols=400 Identities=21% Similarity=0.286 Sum_probs=313.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
++||+|||||+||++||.+|++.+. ..+|+|||++ ...|.++.+...+. .. +.... ......+..+.++
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~-g~~V~vie~~~~~~~~~~~lp~~~~-g~----~~~~~----~~~~~~~~~~~~~ 105 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSE-EDEIIMVERGEYISFANCGLPYYIG-GV----ITERQ----KLLVQTVERMSKR 105 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHHHHT-TS----SCCGG----GGBSSCHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCc-CCCEEEEECCCCccccCCCCchhhc-Cc----CCChH----HhhccCHHHHHHh
Confidence 4799999999999999999999831 2349999999 55555433321110 00 00000 0012234455568
Q ss_pred CCcEEEeCceEEEEECCCCEEEeC---CCc--EEecceEEEccCCCccccCCCCCCCC-CCCCEEEecCHHHHHHHHHHH
Q 013952 84 KGIELILSTEIVRADIASKTLLSA---TGL--IFKYQILVIATGSTVLRLTDFGVEGA-DAKNIFYLREIDDADKLVEAI 157 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~~---~~~--~~~~d~lvlAtG~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~~ 157 (433)
.++++..++.|..++++.+.+.+. ++. ++.||+||+|||+.|..|+ ++|. +..++++.++..+...+...+
T Consensus 106 ~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~~v~~~~~~~~~~~~~~~l 182 (588)
T 3ics_A 106 FNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPS---IPGIEEAKALFTLRNVPDTDRIKAYI 182 (588)
T ss_dssp TTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTTTTCTTEEECSSHHHHHHHHHHH
T ss_pred cCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCCC---CCCcccCCCeEEeCCHHHHHHHHHHH
Confidence 899999999999999999988764 455 7899999999999998887 5776 567899999999998888877
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc
Q 013952 158 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 237 (433)
Q Consensus 158 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~ 237 (433)
....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||+++++++|.+++.+ +.
T Consensus 183 ~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~ 259 (588)
T 3ics_A 183 DEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVFEDGVDALEEN--GA 259 (588)
T ss_dssp HHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEGG--GT
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-CCHHHHHHHHHHHHHcCCEEEECCeEEEEecC--CC
Confidence 6557899999999999999999999999999999999998887 89999999999999999999999999999862 22
Q ss_pred EEEEEeCCCcEEECCEEEEcccCccChhhhh-ccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHH
Q 013952 238 VKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVD 315 (433)
Q Consensus 238 ~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~ 315 (433)
.+.+.+|+++++|.||+|+|++|++++++ .++.. ++|+|.||+++||+.|+|||+|||+..+....|.+...+++.
T Consensus 260 --~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~ 337 (588)
T 3ics_A 260 --VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAW 337 (588)
T ss_dssp --EEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHH
T ss_pred --EEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHH
Confidence 47788999999999999999999998774 45666 578999999999999999999999988776666655567899
Q ss_pred HHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCC------cEEEEcCCC-------ccccCCcEEE
Q 013952 316 HARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG------DTVLFGDND-------LASATHKFGT 382 (433)
Q Consensus 316 ~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~------~~~~~~~~~-------~~~~~~~~~~ 382 (433)
.|..||+++|+||++... ......+|..+..+++..+..+|+++. ..+.....+ ....+.+|.|
T Consensus 338 ~A~~~g~~aa~~i~g~~~---~~~~~~~~~~~~~~~~~~~a~vGlte~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 414 (588)
T 3ics_A 338 PANRQGRMLADIIHGHTD---SLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNATPVLIK 414 (588)
T ss_dssp HHHHHHHHHHHHHTTCCS---SCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEEEEESSCTTSTTCCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCc---cccCCcccceEEEECCeEEEEecCCHHHHHHcCCCeEEEEEecCCccccCCCCceEEEE
Confidence 999999999999997211 123345677776677777777888752 111111111 0123467899
Q ss_pred EEE--eCCEEEEEEEecCC-hHH-HHHHHHHHHcCCCCCChhhhccc
Q 013952 383 YWI--KDGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVLKNE 425 (433)
Q Consensus 383 ~~~--~~~~l~G~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~ 425 (433)
+++ ++++|||+|++|+. ++| |+.++.||+.++|++||..+.-.
T Consensus 415 ~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~~ 461 (588)
T 3ics_A 415 LIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLELS 461 (588)
T ss_dssp EEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCCC
T ss_pred EEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhhc
Confidence 888 68999999999974 666 59999999999999987765543
No 14
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=3e-51 Score=399.26 Aligned_cols=402 Identities=22% Similarity=0.281 Sum_probs=310.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
+||+|||||+||++||..|++. |.+ |+|||++ ...|..+.+.. ++... .... ........++++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~~~----~~~~-----~~~~~~~~~~~~ 67 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAE---IQWYEKGDFISFLSAGMQL-YLEGK----VKDV-----NSVRYMTGEKME 67 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSE---EEEEESSSSSSBCGGGHHH-HHTTS----SCCG-----GGSBSCCHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCe---EEEEECCCccCcccccchh-hhcCc----cCCH-----HHhhcCCHHHHH
Confidence 4899999999999999999998 555 9999999 44443322111 11100 0000 011234567788
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCC---Cc--EEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHH
Q 013952 83 EKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 157 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 157 (433)
+.+++++.++.+..++++.++|.+.+ ++ ++.||+||+|||++|..|+ +||.+..+++++++..++..+.+.+
T Consensus 68 ~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~~~~ 144 (447)
T 1nhp_A 68 SRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFELD---IPGKDLDNIYLMRGRQWAIKLKQKT 144 (447)
T ss_dssp HTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---STTTTSBSEECCCHHHHHHHHHHHH
T ss_pred HCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCCC---CCCCCCCCeEEECCHHHHHHHHHHh
Confidence 88999999999999999888887754 54 4899999999999998887 5776666799888888888887776
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc
Q 013952 158 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 237 (433)
Q Consensus 158 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~ 237 (433)
....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||+++++++|.++.. +++
T Consensus 145 ~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~ 222 (447)
T 1nhp_A 145 VDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATGETVERYEG--DGR 222 (447)
T ss_dssp TCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSB
T ss_pred hhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCc
Confidence 543589999999999999999999999999999999998888668999999999999999999999999999986 344
Q ss_pred EEEEEeCCCcEEECCEEEEcccCccChhhhhccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHH
Q 013952 238 VKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDH 316 (433)
Q Consensus 238 ~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~ 316 (433)
+..+.+ ++.++++|.||+|+|++|+..+++..+.. .+|+|.||++|||+.|+|||+|||+..+....+.+.+.+++..
T Consensus 223 v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~~~~~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~ 301 (447)
T 1nhp_A 223 VQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGTLELHPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATN 301 (447)
T ss_dssp CCEEEE-SSCEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHH
T ss_pred EEEEEE-CCCEEECCEEEECcCCCCChHHHHhhhhhcCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHH
Confidence 445666 45689999999999999999877655555 5688999999999999999999999877655565555578999
Q ss_pred HHHHHHHHHHHHhccCCCCCccCC-CCCCeEEEeecccceEEecCCCCc------EEE---EcCCCcc----ccCCcEEE
Q 013952 317 ARKSAEQAVKTIMATEGGKTVTGY-DYLPYFYSRAFDLSWQFYGDNVGD------TVL---FGDNDLA----SATHKFGT 382 (433)
Q Consensus 317 A~~~g~~aa~~i~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~g~~~~~------~~~---~~~~~~~----~~~~~~~~ 382 (433)
|..||+++|.||.+.. ..+ ...++.+..+++..+..+|.++.+ .+. +.+.... ....+|.|
T Consensus 302 A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~k 376 (447)
T 1nhp_A 302 ARKQGRFAVKNLEEPV-----KPFPGVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAWFK 376 (447)
T ss_dssp HHHHHHHHHHTSSSCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHHTCCCEEEEEEEESSCTTCTTCCEEEEE
T ss_pred HHHHHHHHHHhhcCCC-----CCCCCccccEEEEECCeeeEEecCCHHHHHHcCCceEEEEEEcCCccccCCCCceEEEE
Confidence 9999999999998742 223 234666777777777777876521 111 1111111 12456888
Q ss_pred EEEe--CCEEEEEEEecCC-hHH-HHHHHHHHHcCCCCCChhhh-cccCCCccc
Q 013952 383 YWIK--DGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVL-KNEGLSFAS 431 (433)
Q Consensus 383 ~~~~--~~~l~G~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 431 (433)
+++. +++|+|+|++|+. +.+ ++.++.+|++++|++|+..+ .-+-++|++
T Consensus 377 ~~~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e 430 (447)
T 1nhp_A 377 LVYDPETTQILGAQLMSKADLTANINAISLAIQAKMTIEDLAYADFFFQPAFDK 430 (447)
T ss_dssp EEECTTTCBEEEEEEEESSCCTTHHHHHHHHHHTTCBHHHHHTCCCCCCTTTCC
T ss_pred EEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhcceecCCCCCC
Confidence 8873 7999999999988 777 59999999999999988765 344555544
No 15
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=2.6e-50 Score=404.64 Aligned_cols=397 Identities=22% Similarity=0.304 Sum_probs=312.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHH-Hh
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-KE 83 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 83 (433)
+||+|||||+||++||.+|++.+. ..+|+|+|++ ...|.++.+...+ ...... .........+++ ++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~-~~~V~lie~~~~~~~~~~~l~~~~-~~~~~~---------~~~~~~~~~~~~~~~ 70 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSE-TAEIIMFERGEYVSFANCGLPYHI-SGEIAQ---------RSALVLQTPESFKAR 70 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCS-SSEEEEECSSSCSSBCGGGHHHHH-TSSSCC---------GGGGBCCCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhhCc-CCCEEEEECCCCccccccCchHHh-cCCcCC---------hHHhhccCHHHHHHh
Confidence 489999999999999999999842 3459999999 5555544332111 110000 000112333444 45
Q ss_pred CCcEEEeCceEEEEECCCCEEEeCC---Cc--EEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHH
Q 013952 84 KGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 158 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 158 (433)
.+++++.+++|..++++.+.+.+.+ +. ++.||+||||||++|+.|+ +||.+..+++++++..++..+.+.+.
T Consensus 71 ~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~---ipG~~~~~v~~~~~~~~~~~l~~~~~ 147 (565)
T 3ntd_A 71 FNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVPP---IPGVDNPLTHSLRNIPDMDRILQTIQ 147 (565)
T ss_dssp HCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CTTCCSTTEECCSSHHHHHHHHHHHH
T ss_pred cCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCCC---CCCCCCCCEEEeCCHHHHHHHHHHHh
Confidence 8999999999999999999887653 43 7899999999999998887 67877788999999998888887776
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEec-----
Q 013952 159 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTN----- 233 (433)
Q Consensus 159 ~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~----- 233 (433)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||++++++.+.++..+
T Consensus 148 ~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~ 226 (565)
T 3ntd_A 148 MNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP-VDREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHV 226 (565)
T ss_dssp HTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCC
T ss_pred hCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-cCHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccc
Confidence 667899999999999999999999999999999999998884 89999999999999999999999999999862
Q ss_pred -------------CCCcEEEEEeCCCcEEECCEEEEcccCccChhhhh-ccccc-CCCcEEeCCCCCCCCCCeEEcCccc
Q 013952 234 -------------ADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAE-NKGGIETDDFFKTSADDVYAVGDVA 298 (433)
Q Consensus 234 -------------~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~ 298 (433)
.++. ..+.+.+|+++++|.||+|+|++|++.++. .++.. ++|+|.||+++||+.|+|||+|||+
T Consensus 227 ~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~ 305 (565)
T 3ntd_A 227 ASDAAGEDTAHQHIKGH-LSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAV 305 (565)
T ss_dssp CCGGGTCCCTTCCTTCE-EEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGB
T ss_pred cccccccccccccCCCc-EEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCCCEEECCCcccCCCCEEEeeeeE
Confidence 1333 457778888999999999999999988774 36666 5789999999999999999999999
Q ss_pred cccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCC-CeEEEeecccceEEecCCCCc---------EEEE
Q 013952 299 TFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYL-PYFYSRAFDLSWQFYGDNVGD---------TVLF 368 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~g~~~~~---------~~~~ 368 (433)
..+....|.+...+++..|..||++||+||++.. ..|... +..++.+++..+..+|+++.+ ...+
T Consensus 306 ~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~e~~a~~~g~~~~~~~~ 380 (565)
T 3ntd_A 306 EEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE-----ERYQGTQGTAICKVFDLAVGATGKNEKQLKQAGIAFEKVYV 380 (565)
T ss_dssp CEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCCEEEEE
T ss_pred eeccccCCceeecccHHHHHHHHHHHHHHhcCCC-----ccCCCcccceEEEEcCcEEEEecCCHHHHHHcCCCeEEEEE
Confidence 8887766766666789999999999999999754 234443 445566788888888987522 1111
Q ss_pred cCCCc---c-ccCCcEEEEEE--eCCEEEEEEEecCCh-HH-HHHHHHHHHcCCCCCChhhhc
Q 013952 369 GDNDL---A-SATHKFGTYWI--KDGKVVGVFLESGTP-EE-NKAIAKVARVQPSVESLDVLK 423 (433)
Q Consensus 369 ~~~~~---~-~~~~~~~~~~~--~~~~l~G~~~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 423 (433)
..... . ....+|.|+++ ++++|||+|++|+++ +| ++.++.||++++|++||..+.
T Consensus 381 ~~~~~~~~~~~~~~~~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~~l~~~~ 443 (565)
T 3ntd_A 381 HTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVEQLQHLE 443 (565)
T ss_dssp EEESSCTTSTTCCEEEEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHHHHTTCC
T ss_pred ecCcccCcCCCCceEEEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhhh
Confidence 11111 1 23457889888 689999999999998 67 599999999999999777654
No 16
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=7.5e-50 Score=392.31 Aligned_cols=401 Identities=21% Similarity=0.297 Sum_probs=308.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHH-
Q 013952 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY- 81 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (433)
+||+|||||+||+++|.+|++. |.+ |+|||++ ...|.++.++. ++... .... ........+.+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~---V~lie~~~~~~~~~~~~~~-~~~~~----~~~~-----~~l~~~~~~~~~ 103 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENAN---VVTLEKGEIYSYAQCGLPY-VISGA----IAST-----EKLIARNVKTFR 103 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCE---EEEECSSSCCSBCGGGHHH-HHTTS----SSCG-----GGGBSSCHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCc---EEEEECCCCCCCCCCCcch-hhcCC----cCCH-----HHhhhcCHHHHH
Confidence 6999999999999999999997 554 9999999 54454432221 11100 0000 01122345555
Q ss_pred HhCCcEEEeCceEEEEECCCCEEEeCC---Cc--EEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHH
Q 013952 82 KEKGIELILSTEIVRADIASKTLLSAT---GL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEA 156 (433)
Q Consensus 82 ~~~~v~~~~~~~v~~i~~~~~~v~~~~---~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~ 156 (433)
+..+++++.++.|..++++.+.+.+.+ ++ ++.||+||+|||++|+.|+ ++|.+..+++++.+..++..+.+.
T Consensus 104 ~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~~~~v~~~~~~~~~~~l~~~ 180 (480)
T 3cgb_A 104 DKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVMPE---WEGRDLQGVHLLKTIPDAERILKT 180 (480)
T ss_dssp HTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCCC---CBTTTSBTEECCSSHHHHHHHHHH
T ss_pred hhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccCCC---CCCccCCCEEEeCCHHHHHHHHHH
Confidence 445999999889999999888887653 65 7999999999999998877 577666789988899998888877
Q ss_pred HHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCC
Q 013952 157 IKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADG 236 (433)
Q Consensus 157 ~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g 236 (433)
+....+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||+++++++|.++.. ++
T Consensus 181 ~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~ 257 (480)
T 3cgb_A 181 LETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI-YDGDMAEYIYKEADKHHIEILTNENVKAFKG--NE 257 (480)
T ss_dssp HHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEE--SS
T ss_pred hhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc-CCHHHHHHHHHHHHHcCcEEEcCCEEEEEEc--CC
Confidence 76546899999999999999999999999999999999888875 7999999999999999999999999999987 45
Q ss_pred cEEEEEeCCCcEEECCEEEEcccCccChhhhhc-cccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccH
Q 013952 237 EVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHV 314 (433)
Q Consensus 237 ~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~ 314 (433)
++..+.+.+ .++++|.||+|+|++|+.++++. ++.. ++|+|.||+++||+.|+|||+|||+..+....+.+.+.+++
T Consensus 258 ~v~~v~~~~-~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~ 336 (480)
T 3cgb_A 258 RVEAVETDK-GTYKADLVLVSVGVKPNTDFLEGTNIRTNHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIG 336 (480)
T ss_dssp BEEEEEETT-EEEECSEEEECSCEEESCGGGTTSCCCBCTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCH
T ss_pred cEEEEEECC-CEEEcCEEEECcCCCcChHHHHhCCcccCCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchH
Confidence 555666654 58999999999999999887743 4665 56899999999999999999999998876655655555789
Q ss_pred HHHHHHHHHHHHHHhccCCCCCccCCC-CCCeEEEeecccceEEecCCCC------cEEE---EcCCCcc----ccCCcE
Q 013952 315 DHARKSAEQAVKTIMATEGGKTVTGYD-YLPYFYSRAFDLSWQFYGDNVG------DTVL---FGDNDLA----SATHKF 380 (433)
Q Consensus 315 ~~A~~~g~~aa~~i~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~g~~~~------~~~~---~~~~~~~----~~~~~~ 380 (433)
..|..||+++|.||.+.. ..|. +.++.+..+++..+..+|.++. ..+. +...... ....+|
T Consensus 337 ~~A~~qg~~aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 411 (480)
T 3cgb_A 337 TTANKQGRLAGLNMLDKR-----RAFKGTLGTGIIKFMNLTLARTGLNEKEAKGLHIPYKTVKVDSTNMAGYYPNAKPLY 411 (480)
T ss_dssp HHHHHHHHHHHHHHTTCC-----CCCCCBCCCEEEEETTEEEEEEECCHHHHHHTTCCEEEEEEEEESSCTTSTTCCEEE
T ss_pred HHHHHHHHHHHHHhcCCC-----ccCCCccceeEEEECCcEEEEeCCCHHHHHHcCCceEEEEEecCCcccccCCCceEE
Confidence 999999999999998743 2332 3334566667777777787642 1111 1111100 124568
Q ss_pred EEEEE--eCCEEEEEEEecCC-hHH-HHHHHHHHHcCCCCCChhhh-cccCCCccc
Q 013952 381 GTYWI--KDGKVVGVFLESGT-PEE-NKAIAKVARVQPSVESLDVL-KNEGLSFAS 431 (433)
Q Consensus 381 ~~~~~--~~~~l~G~~~~g~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 431 (433)
.|+++ ++|+|+|++++|+. ++| ++.++.+|++++|++|+..+ ..+.++|++
T Consensus 412 ~kl~~~~~~~~ilG~~~vg~~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e 467 (480)
T 3cgb_A 412 LKLLYRSDTKQLLGGQVIGEEGVDKRIDVIAMALFNKMSIHDLEDVDLSYAPPYNS 467 (480)
T ss_dssp EEEEEETTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBGGGGGGCCCCCCTTTCC
T ss_pred EEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhcccccCCCCCC
Confidence 88887 48999999999998 877 49999999999999988765 334455544
No 17
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.6e-49 Score=379.70 Aligned_cols=366 Identities=22% Similarity=0.314 Sum_probs=288.3
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCC-CCHhHH
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGER-LLPEWY 81 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 81 (433)
.++||+|||||+||++||.+|++.|. ..+|+++|++ .+.|.++.++..+...... . .... ....++
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~~~V~lie~~~g~~~~~~~l~~~~~~~~~~-------~----~~~~~~~~~~~ 70 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDG-ETPLLMITADDGRSYSKPMLSTGFSKNKDA-------D----GLAMAEPGAMA 70 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCS-SSCEEEECSSCCCEECGGGGGGTTTTTCCH-------H----HHEEECHHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCC-CCCEEEEECCCCCccCcccccHHHhCCCCH-------H----HhhccCHHHHH
Confidence 46899999999999999999999985 3459999999 6666655444322111000 0 0011 234556
Q ss_pred HhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcC
Q 013952 82 KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKK 161 (433)
Q Consensus 82 ~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~ 161 (433)
++.+++++.++.+..++++.++|.+.+ .++.||+||+|||+.|..|+ ++|.+..++++.+++.++..+...+. .
T Consensus 71 ~~~~v~~~~~~~v~~i~~~~~~v~~~~-~~~~~d~lviAtG~~p~~p~---i~g~~~~~v~~~~~~~~~~~~~~~~~--~ 144 (384)
T 2v3a_A 71 EQLNARILTHTRVTGIDPGHQRIWIGE-EEVRYRDLVLAWGAEPIRVP---VEGDAQDALYPINDLEDYARFRQAAA--G 144 (384)
T ss_dssp HHTTCEEECSCCCCEEEGGGTEEEETT-EEEECSEEEECCCEEECCCC---CBSTTTTCEEECSSHHHHHHHHHHHT--T
T ss_pred HhCCcEEEeCCEEEEEECCCCEEEECC-cEEECCEEEEeCCCCcCCCC---CCCcCcCCEEEECCHHHHHHHHHhhc--c
Confidence 788999998888999998888888865 47999999999999998877 57766578999999998888777665 4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 241 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v 241 (433)
+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++..+++++.+.+.+.+++.||+++++++|.++..+ +....+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~~~v 222 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEGLEA 222 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCEEEE
Confidence 899999999999999999999999999999999998887679999999999999999999999999999873 233578
Q ss_pred EeCCCcEEECCEEEEcccCccChhhhh-cccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHH
Q 013952 242 KLKDGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKS 320 (433)
Q Consensus 242 ~~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~ 320 (433)
.+.+|+++++|.||+|+|++|+.++++ .++..++| |.||+++||+.|+|||+|||+..+.. ..+++..|..|
T Consensus 223 ~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~~g-i~vd~~~~t~~~~IyA~GD~~~~~~~------~~~~~~~a~~~ 295 (384)
T 2v3a_A 223 HLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRG-IVVDRSLRTSHANIYALGDCAEVDGL------NLLYVMPLMAC 295 (384)
T ss_dssp EETTSCEEEESEEEECSCEEECCHHHHHTTCCBSSS-EEECTTCBCSSTTEEECGGGEEETTB------CCCSHHHHHHH
T ss_pred EECCCCEEECCEEEECcCCCcCHHHHHHCCCCCCCC-EEECCCCCCCCCCEEEeeeeeeECCC------CcchHHHHHHH
Confidence 888998999999999999999998764 45666666 99999999999999999999975422 11568889999
Q ss_pred HHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCCc---EEEEcCCCccccCCcEEEEEE-eCCEEEEEEEe
Q 013952 321 AEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD---TVLFGDNDLASATHKFGTYWI-KDGKVVGVFLE 396 (433)
Q Consensus 321 g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~~~~ 396 (433)
|+.+|+||.+.. .+..|..+|+++.. ++..+...|..... ....++ ..+|.+++. ++|+|+|++++
T Consensus 296 g~~~a~~i~g~~---~~~~~~~~p~~~~~-~~~~~~~~g~~~~~~~~~~~~~~------~~g~~~~~~~~~~~i~G~~~~ 365 (384)
T 2v3a_A 296 ARALAQTLAGNP---SQVAYGPMPVTVKT-PACPLVVSPPPRGMDGQWLVEGS------GTDLKVLCRDTAGRVIGYALT 365 (384)
T ss_dssp HHHHHHHHTTCC---CCCCCCCCCEEECC-TTSCEEEECCCTTCCCEEEEEEE------TTEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHhcCCC---ccCCCCCcceEEEE-CCeeEEEecCCCCCCceEEEEec------CCcEEEEEEccCCEEEEEEEE
Confidence 999999999753 23566778886644 44566666765432 122222 346888777 48999999999
Q ss_pred cCChHHHHHH
Q 013952 397 SGTPEENKAI 406 (433)
Q Consensus 397 g~~~~~~~~~ 406 (433)
|+.++|+..+
T Consensus 366 g~~a~e~~~~ 375 (384)
T 2v3a_A 366 GAAVNEKLAL 375 (384)
T ss_dssp GGGGGGHHHH
T ss_pred CcchHHHHHH
Confidence 9999996433
No 18
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.9e-49 Score=375.69 Aligned_cols=351 Identities=24% Similarity=0.391 Sum_probs=275.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.|++|||||+||++||..|++.| + |+|||++ ...|.++.+++.+. .. .. . ........+++++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~---V~lie~~~~~~~~~~~l~~~~~-g~----~~-~-----~~~~~~~~~~~~~~ 73 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-E---VTVIDKEPVPYYSKPMLSHYIA-GF----IP-R-----NRLFPYSLDWYRKR 73 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-E---EEEECSSSSCCCCSTTHHHHHT-TS----SC-G-----GGGCSSCHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-C---EEEEECCCCCccccchhHHHHh-CC----CC-H-----HHhccCCHHHHHhC
Confidence 59999999999999999999988 5 9999999 66676666554221 10 00 0 01123456788889
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCc
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGK 164 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 164 (433)
+++++.+++|..++++.+.|. .+++++.||+||||||++|+.|+ +|| .++++++++..++..+.+.+. ++++
T Consensus 74 ~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~~p~---i~G--~~~v~~~~~~~~~~~l~~~~~--~~~~ 145 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAREPQ---IKG--KEYLLTLRTIFDADRIKESIE--NSGE 145 (367)
T ss_dssp TEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEECCCC---SBT--GGGEECCCSHHHHHHHHHHHH--HHSE
T ss_pred CcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCCCCC---CCC--cCCEEEEcCHHHHHHHHHHhh--cCCc
Confidence 999999988999999888888 67788999999999999998877 566 357888888888888877664 2589
Q ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC
Q 013952 165 AVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK 244 (433)
Q Consensus 165 v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~ 244 (433)
++|||+|++|+|+|..|.+.|.+|+++++.+.+++ +++++.+.+.+.+++.||+++++++|++++. ..+.+.
T Consensus 146 vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~------~~v~~~ 217 (367)
T 1xhc_A 146 AIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--LDEELSNMIKDMLEETGVKFFLNSELLEANE------EGVLTN 217 (367)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--CCHHHHHHHHHHHHHTTEEEECSCCEEEECS------SEEEET
T ss_pred EEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--CCHHHHHHHHHHHHHCCCEEEcCCEEEEEEe------eEEEEC
Confidence 99999999999999999999999999999999888 7999999999999999999999999999963 247788
Q ss_pred CCcEEECCEEEEcccCccChhhhh-cccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHH
Q 013952 245 DGRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQ 323 (433)
Q Consensus 245 ~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~ 323 (433)
+|+ +++|.|++|+|++|++++++ .++..+ ++|.||++|||+.|+|||+|||+..... ...++..|..||+.
T Consensus 218 ~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~-~gi~Vd~~~~t~~~~IyA~GD~a~~~~~------~~~~~~~A~~qg~~ 289 (367)
T 1xhc_A 218 SGF-IEGKVKICAIGIVPNVDLARRSGIHTG-RGILIDDNFRTSAKDVYAIGDCAEYSGI------IAGTAKAAMEQARV 289 (367)
T ss_dssp TEE-EECSCEEEECCEEECCHHHHHTTCCBS-SSEECCTTSBCSSTTEEECGGGEEBTTB------CCCSHHHHHHHHHH
T ss_pred CCE-EEcCEEEECcCCCcCHHHHHhCCCCCC-CCEEECCCcccCCCCEEEeEeeeecCCC------CccHHHHHHHHHHH
Confidence 887 99999999999999998764 355555 4599999999999999999999975332 11578899999999
Q ss_pred HHHHHhccCCCCCccCCCCC-CeEEEeecccceEEecCCCCcEEEEcCCCccccCCcEEEEEEeCCEEEEEEEecCChHH
Q 013952 324 AVKTIMATEGGKTVTGYDYL-PYFYSRAFDLSWQFYGDNVGDTVLFGDNDLASATHKFGTYWIKDGKVVGVFLESGTPEE 402 (433)
Q Consensus 324 aa~~i~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~g~~~~~ 402 (433)
+|.||.+.. .+|... |+.+..+++..+..+|.++.+.... .+|.|+++++++|+|++++|+.+.
T Consensus 290 aa~~i~g~~-----~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~---------~~~~k~~~~~~~ilG~~~~g~~~~- 354 (367)
T 1xhc_A 290 LADILKGEP-----RRYNFKFRSTVFKFGKLQIAIIGNTKGEGKWI---------EDNTKVFYENGKIIGAVVFNDIRK- 354 (367)
T ss_dssp HHHHHTTCC-----CCCCSSCCEEEEEETTEEEEEEECCSSCEEEE---------ETTEEEEC-----CEEEEESCHHH-
T ss_pred HHHHhcCCC-----ccCCCCCCceEEEECCceEEEECCCCCCCccc---------ceEEEEEEECCEEEEEEEECChHH-
Confidence 999998743 345554 4444567788888889887654321 468899988899999999996543
Q ss_pred HHHHHHHH
Q 013952 403 NKAIAKVA 410 (433)
Q Consensus 403 ~~~~~~~~ 410 (433)
...+..+|
T Consensus 355 ~~~~~~~i 362 (367)
T 1xhc_A 355 ATKLEKEI 362 (367)
T ss_dssp HHHHC---
T ss_pred HHHHHHHH
Confidence 44443333
No 19
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=4.1e-49 Score=387.56 Aligned_cols=403 Identities=23% Similarity=0.353 Sum_probs=305.2
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCC-----CCCCcc-----cccCCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTA-----RLPGFH-----VCVGSG 72 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~~~ 72 (433)
..+||||||||+||++||..|++.+. ..+|+|||++ ..+|.+|.+++.++...... .+.++. ..+...
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~-g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDP-GARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHST-TCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCC-CCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 46899999999999999999998843 3459999999 78898888888776543210 000000 000000
Q ss_pred -CCCCCHhH--HHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCC----CCCEEEec
Q 013952 73 -GERLLPEW--YKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD----AKNIFYLR 145 (433)
Q Consensus 73 -~~~~~~~~--~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~----~~~v~~~~ 145 (433)
.......+ +.+.+++++.++.|+.++++.++|.+.+++++.||+||||||++|+.++. ++.. ..+++.++
T Consensus 89 ~~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs~p~~~~~---~~~~~~~~~~~v~~~~ 165 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGGTPRSLSA---IDRAGAEVKSRTTLFR 165 (493)
T ss_dssp GGSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCEEECCCHH---HHTSCHHHHHTEEECC
T ss_pred HhhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCCCCCCCCC---cccccccccCceEEEc
Confidence 00000111 13568999999999999998999999999999999999999999987663 3321 24688888
Q ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHh----CCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEE
Q 013952 146 EIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKI----NNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKI 221 (433)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~----~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v 221 (433)
+..++..+...+. .+++++|||+|++|+|+|..|.+ .|.+|+++.+.+.++.+.+++++.+.+.+.+++.||++
T Consensus 166 ~~~d~~~l~~~~~--~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v 243 (493)
T 1m6i_A 166 KIGDFRSLEKISR--EVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKV 243 (493)
T ss_dssp SHHHHHHHHHHHH--HCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEE
T ss_pred CHHHHHHHHHHhh--cCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccCCHHHHHHHHHHHHhcCCEE
Confidence 9988888877665 37899999999999999999876 47899999998877777788999999999999999999
Q ss_pred EcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhh-cccccC--CCcEEeCCCCCCCCCCeEEcCccc
Q 013952 222 IKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK-GQVAEN--KGGIETDDFFKTSADDVYAVGDVA 298 (433)
Q Consensus 222 ~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~--~g~i~vd~~~~t~~~~vfa~Gd~~ 298 (433)
++++.|.++.. +++. ..+.+.+|+++++|.||+|+|++||+++++ .++..+ +|+|.||++||| .|+|||+|||+
T Consensus 244 ~~~~~V~~i~~-~~~~-~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~gl~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a 320 (493)
T 1m6i_A 244 MPNAIVQSVGV-SSGK-LLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA-RSNIWVAGDAA 320 (493)
T ss_dssp ECSCCEEEEEE-ETTE-EEEEETTSCEEEESEEEECCCEEECCTTHHHHTCCBCTTTCSEECCTTCEE-ETTEEECGGGE
T ss_pred EeCCEEEEEEe-cCCe-EEEEECCCCEEECCEEEECCCCCccHHHHHHcCCccccCCCcEEECCCccc-CCCeeEeeeeE
Confidence 99999999986 2333 478889999999999999999999998774 456664 489999999999 69999999999
Q ss_pred cccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeec-ccceEEecCCCCcEEEEc--------
Q 013952 299 TFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAF-DLSWQFYGDNVGDTVLFG-------- 369 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~g~~~~~~~~~~-------- 369 (433)
..++...+.. +.++|..|..||+.||.||++.. .+|...|++|+.+. +..+..+|.........|
T Consensus 321 ~~~~~~~g~~-~~~~~~~A~~qg~~aa~ni~g~~-----~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~G~~~~~~~~ 394 (493)
T 1m6i_A 321 CFYDIKLGRR-RVEHHDHAVVSGRLAGENMTGAA-----KPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQ 394 (493)
T ss_dssp EEEETTTEEE-CCCCHHHHHHHHHHHHHHHTSCC-----CCCCCCCEEEEESSTTCEEEEEECCCTTSCEEEEEECCCTT
T ss_pred eccCcccCcc-ccchHHHHHHHHHHHHHHhcCCC-----CCcCCcCceeeeeccCcceEEEeccCCCcceEEeecccccc
Confidence 9876655543 45789999999999999999753 67889999999886 444444442110000000
Q ss_pred -----------------------------------CC--Cc-cccCCcEEEEEEeCCEEEEEEEecCChHHHHHHHHHHH
Q 013952 370 -----------------------------------DN--DL-ASATHKFGTYWIKDGKVVGVFLESGTPEENKAIAKVAR 411 (433)
Q Consensus 370 -----------------------------------~~--~~-~~~~~~~~~~~~~~~~l~G~~~~g~~~~~~~~~~~~~~ 411 (433)
+. +. ......|..+|+++|+|+|+.++| ...++..+..+|+
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~li~ 473 (493)
T 1m6i_A 395 DNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWN-IFNRMPIARKIIK 473 (493)
T ss_dssp CSHHHHHHHHSCSCHHHHSCSCCCC--------------------CCEEEEEEEETTEEEEEEEES-CCSCHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccCCcEEEEEEeCCEEEEEEEec-CcchHHHHHHHHh
Confidence 00 00 001234566888999999999997 5577888999999
Q ss_pred cCCCCCChhhh
Q 013952 412 VQPSVESLDVL 422 (433)
Q Consensus 412 ~~~~~~~~~~~ 422 (433)
++.+++++.++
T Consensus 474 ~~~~~~~~~~~ 484 (493)
T 1m6i_A 474 DGEQHEDLNEV 484 (493)
T ss_dssp HCCBCSCSTTG
T ss_pred CCCCCCCHHHH
Confidence 99999888766
No 20
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=1.1e-49 Score=394.75 Aligned_cols=389 Identities=20% Similarity=0.255 Sum_probs=284.9
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCccccccCCCC-------CC--C-CCCccc
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYE-----RPALSKAYLFPEG-------TA--R-LPGFHV 67 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~-----~~~~~~~~~~~~~-------~~--~-~~~~~~ 67 (433)
+.++||+|||||++|+++|.+|++.|++ |+|||++..... .|..++.++.... .. . ++....
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~ 117 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGR---QLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTE 117 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHh
Confidence 3468999999999999999999999987 999999821111 1111111110000 00 0 000000
Q ss_pred ------ccCCCCCCCCH---hHH-----HhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCC
Q 013952 68 ------CVGSGGERLLP---EWY-----KEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGV 133 (433)
Q Consensus 68 ------~~~~~~~~~~~---~~~-----~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~ 133 (433)
........... .++ ++.+++++....+..++. ++|.+. ++++.||+||+|||+.|..|+ +
T Consensus 118 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~~-g~~~~~d~lViATGs~p~~p~---i 191 (523)
T 1mo9_A 118 KVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEAA-GKVFKAKNLILAVGAGPGTLD---V 191 (523)
T ss_dssp CCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEET-TEEEEBSCEEECCCEECCCCC---S
T ss_pred hhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEEC-CEEEEeCEEEECCCCCCCCCC---C
Confidence 00000000022 455 678999984457777875 567765 678999999999999998887 5
Q ss_pred CCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHH
Q 013952 134 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 213 (433)
Q Consensus 134 ~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~ 213 (433)
+|.+..++++..+ +. +.++..++++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.
T Consensus 192 ~G~~~~~v~~~~~---~~---~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~ 264 (523)
T 1mo9_A 192 PGVNAKGVFDHAT---LV---EELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-KDNETRAYVLDR 264 (523)
T ss_dssp TTTTSBTEEEHHH---HH---HHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-CSHHHHHHHHHH
T ss_pred CCcccCcEeeHHH---HH---HHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-ccHHHHHHHHHH
Confidence 7766556775432 22 1222223399999999999999999999999999999999998886 799999999999
Q ss_pred HHhcCcEEEcCCeEEEEEecCCCcE--EEEEeCCCc-EEECCEEEEcccCccChh-hh-hccccc-CCCcEEeCCCCCCC
Q 013952 214 YANKGIKIIKGTVAVGFTTNADGEV--KEVKLKDGR-TLEADIVVVGVGGRPLIS-LF-KGQVAE-NKGGIETDDFFKTS 287 (433)
Q Consensus 214 l~~~GV~v~~~~~v~~i~~~~~g~~--~~v~~~~g~-~i~~d~vi~a~G~~p~~~-~~-~~~~~~-~~g~i~vd~~~~t~ 287 (433)
+++.||+++++++|+++..++++++ ..|.+.+|+ ++++|.||+|+|++|+++ ++ ..++.. ++|+|.||++|||+
T Consensus 265 l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd~~~~t~ 344 (523)
T 1mo9_A 265 MKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYLQTS 344 (523)
T ss_dssp HHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCCTTSBCS
T ss_pred HHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEECCCCccC
Confidence 9999999999999999987444543 467888887 899999999999999997 55 446776 57889999999999
Q ss_pred CCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC-----
Q 013952 288 ADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV----- 362 (433)
Q Consensus 288 ~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~----- 362 (433)
.|+|||+|||++.+ ..+..|..||++||.||.+... ...+..+|++++..++++. +|.++
T Consensus 345 ~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~~~~a~--vG~~e~~a~~ 409 (523)
T 1mo9_A 345 VPNVYAVGDLIGGP----------MEMFKARKSGCYAARNVMGEKI---SYTPKNYPDFLHTHYEVSF--LGMGEEEARA 409 (523)
T ss_dssp STTEEECGGGGCSS----------CSHHHHHHHHHHHHHHHTTCCC---CCCCCSCCEEEESSSEEEE--EECCHHHHHH
T ss_pred CCCEEEEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCC---CCCCCCCCeEEECCCceEE--EeCCHHHHHh
Confidence 99999999999765 4567799999999999997431 2347778988876665544 47654
Q ss_pred -CcEEEEcCCCcc------------------------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCC
Q 013952 363 -GDTVLFGDNDLA------------------------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQP 414 (433)
Q Consensus 363 -~~~~~~~~~~~~------------------------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~ 414 (433)
+..+..+..+.. ....+|.|+++ ++++|+|+|++|+.++++ +.++.+|++++
T Consensus 410 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~ 489 (523)
T 1mo9_A 410 AGHEIVTIKMPPDTENGLNVALPASDRTMLYAFGKGTAHMSGFQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGL 489 (523)
T ss_dssp TTCCEEEEEESCCSTTTTCSSCSCCTTTHHHHHSTTTGGGGCEEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEEecccccccccccccccccccceEEeecCCCCEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCC
Confidence 222322211110 23457899888 479999999999988875 99999999999
Q ss_pred CCCChhhh
Q 013952 415 SVESLDVL 422 (433)
Q Consensus 415 ~~~~~~~~ 422 (433)
|++|+..+
T Consensus 490 t~~~l~~~ 497 (523)
T 1mo9_A 490 TVDELGDM 497 (523)
T ss_dssp BHHHHHTS
T ss_pred CHHHHHhC
Confidence 99977766
No 21
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-50 Score=395.06 Aligned_cols=398 Identities=15% Similarity=0.215 Sum_probs=285.6
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCC-C---CCCCCCccccccCCCC----CCCCCCccccc-----C
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEV-A---PYERPALSKAYLFPEG----TARLPGFHVCV-----G 70 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~-~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~ 70 (433)
.++||+|||||++|+++|..|++.|.+ |+|||++. . ....|..++.++.... ......+.... .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAK---TLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCc---EEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 368999999999999999999999987 99999981 0 0000111111100000 00000000000 0
Q ss_pred --CCC----------------CCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCc--EEecceEEEccCCCcccc-C
Q 013952 71 --SGG----------------ERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL--IFKYQILVIATGSTVLRL-T 129 (433)
Q Consensus 71 --~~~----------------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~--~~~~d~lvlAtG~~~~~~-~ 129 (433)
... ...+...+++.+++++.+ .+..+++....+...+++ ++.||+||+|||+.|..| +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~~ 165 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFG-WARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPEN 165 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE-EEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEECCCTT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCCCCC
Confidence 000 001123455689999987 566666554456666766 799999999999999877 6
Q ss_pred CCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHH
Q 013952 130 DFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAF 209 (433)
Q Consensus 130 ~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~ 209 (433)
+||.+ .++ +..+...+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.
T Consensus 166 ---i~g~~--~~~---~~~~~~~l----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~ 231 (479)
T 2hqm_A 166 ---IPGFE--LGT---DSDGFFRL----E-EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK-FDECIQNT 231 (479)
T ss_dssp ---STTGG--GSB---CHHHHHHC----S-SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHH
T ss_pred ---CCCcc--ccc---chHHHhcc----c-ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc-cCHHHHHH
Confidence 56542 122 23333222 1 25799999999999999999999999999999999998876 89999999
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC-cEEECCEEEEcccCccChhh-h-hccccc-CCCcEEeCCCCC
Q 013952 210 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG-RTLEADIVVVGVGGRPLISL-F-KGQVAE-NKGGIETDDFFK 285 (433)
Q Consensus 210 l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g-~~i~~d~vi~a~G~~p~~~~-~-~~~~~~-~~g~i~vd~~~~ 285 (433)
+.+.+++.||+++++++|.++..++++....+.+.+| +++++|.||+|+|++|++.+ + ..++.. ++|+|.||++||
T Consensus 232 l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~~gl~~~~~G~i~vd~~~~ 311 (479)
T 2hqm_A 232 ITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSENVGIKLNSHDQIIADEYQN 311 (479)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGGGTCCBCTTSCBCCCTTCB
T ss_pred HHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhhcCceECCCCCEeECCCCc
Confidence 9999999999999999999998743443467888888 78999999999999999965 3 345666 478899999999
Q ss_pred CCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCC-CCCccCCCCCCeEEEeecccceEEecCCCCc
Q 013952 286 TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG-GKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD 364 (433)
Q Consensus 286 t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~ 364 (433)
|+.|+|||+|||++.+ .++..|..||+.+|.||++... .....+|..+|++.+..++++.+ |+++.+
T Consensus 312 t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~v--Gl~e~~ 379 (479)
T 2hqm_A 312 TNVPNIYSLGDVVGKV----------ELTPVAIAAGRKLSNRLFGPEKFRNDKLDYENVPSVIFSHPEAGSI--GISEKE 379 (479)
T ss_dssp CSSTTEEECGGGTTSS----------CCHHHHHHHHHHHHHHHHSCGGGTTCCCCCTTCCEEECCSSCEEEE--ECCHHH
T ss_pred cCCCCEEEEEecCCCc----------ccHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCeEEECCCCeEEE--eCCHHH
Confidence 9999999999998654 5678899999999999997531 01235677788877766665555 655311
Q ss_pred --------EEEEcC-----CCc---cccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhccc
Q 013952 365 --------TVLFGD-----NDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNE 425 (433)
Q Consensus 365 --------~~~~~~-----~~~---~~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 425 (433)
.+.... ... .....+|.|+++ ++|+|+|+|++|+.++++ +.++.+|+.++|++||..+.-+
T Consensus 380 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~ 459 (479)
T 2hqm_A 380 AIEKYGKENIKVYNSKFTAMYYAMLSEKSPTRYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAI 459 (479)
T ss_dssp HHHHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCC
T ss_pred HHhcCCCCcEEEEEEeccHHHHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCC
Confidence 122211 111 123567889888 479999999999998885 9999999999999988877666
Q ss_pred CCCccc
Q 013952 426 GLSFAS 431 (433)
Q Consensus 426 ~~~~~~ 431 (433)
-+++++
T Consensus 460 hPt~~e 465 (479)
T 2hqm_A 460 HPTSAE 465 (479)
T ss_dssp SSCSGG
T ss_pred CCChHH
Confidence 666554
No 22
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=4.9e-50 Score=394.22 Aligned_cols=393 Identities=18% Similarity=0.209 Sum_probs=273.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC------------CCCCCccccccCCCCC-------CCCCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP------------YERPALSKAYLFPEGT-------ARLPG 64 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~------------~~~~~~~~~~~~~~~~-------~~~~~ 64 (433)
.||+|||||||||+.||.++++.|.+ |+|||+. ... +..|.++|.++..... ....+
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~k---ValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~G 118 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGAR---VLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYG 118 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC---EEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcC
Confidence 48999999999999999999999998 9999975 211 1122333333321110 00001
Q ss_pred ccccc-CCC--------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEE--eC----CCcEEecceEEEccCC
Q 013952 65 FHVCV-GSG--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLL--SA----TGLIFKYQILVIATGS 123 (433)
Q Consensus 65 ~~~~~-~~~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~--~~----~~~~~~~d~lvlAtG~ 123 (433)
+.... ..+ ........+++.+|+++.+...+ ++ .++|. .. ++++++++++|||||+
T Consensus 119 i~~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f-~~--~~~v~V~~~~~~~~~~~i~a~~iiIATGs 195 (542)
T 4b1b_A 119 WKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKL-KD--KNTVSYYLKGDLSKEETVTGKYILIATGC 195 (542)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-EE--TTEEEEEEC--CCCEEEEEEEEEEECCCE
T ss_pred cccCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-cC--CCcceEeecccCCceEEEeeeeEEeccCC
Confidence 11000 000 00112234567899999874433 33 34443 22 3357999999999999
Q ss_pred CccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCC
Q 013952 124 TVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFT 203 (433)
Q Consensus 124 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~ 203 (433)
+|..|+. .+.....+++.+++.+... .|++++|||+|++|+|+|..|+++|.+||++.+. ++++. +|
T Consensus 196 ~P~~P~~---~~~~~~~~~ts~~~l~l~~--------lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~-~~L~~-~D 262 (542)
T 4b1b_A 196 RPHIPDD---VEGAKELSITSDDIFSLKK--------DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS-IVLRG-FD 262 (542)
T ss_dssp EECCCSS---SBTHHHHCBCHHHHTTCSS--------CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS-CSSTT-SC
T ss_pred CCCCCCc---ccCCCccccCchhhhcccc--------CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc-ccccc-cc
Confidence 9998864 2222222333222222111 5899999999999999999999999999999874 56665 79
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhh---ccccc-CCCc-E
Q 013952 204 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFK---GQVAE-NKGG-I 278 (433)
Q Consensus 204 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~---~~~~~-~~g~-i 278 (433)
+++++.+.+.+++.||++++++.+.++.. .+....+.+.++.++.+|.|++|+|++||++.+. .++.. ..++ +
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~--~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i 340 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTK--MDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKI 340 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE--ETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEe--cCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceE
Confidence 99999999999999999999999999987 3334578888888999999999999999999774 34555 3444 5
Q ss_pred EeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEe
Q 013952 279 ETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFY 358 (433)
Q Consensus 279 ~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 358 (433)
.+|+++||++|+|||+|||++... .+...|.++|+++++|+++.... ...|..+|++.++.|+++.+
T Consensus 341 ~vd~~~~Ts~p~IyAiGDv~~~~p---------~La~~A~~eg~~aa~~i~g~~~~--~~d~~~iP~~vft~PeiA~V-- 407 (542)
T 4b1b_A 341 IADHLSCTNIPSIFAVGDVAENVP---------ELAPVAIKAGEILARRLFKDSDE--IMDYSYIPTSIYTPIEYGAC-- 407 (542)
T ss_dssp CCCTTSBCSSTTEEECTTSBTTCC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCSSCCEEECSSSCEEEE--
T ss_pred eccccccccCCCeEEeccccCCch---------hHHHHHHHHHHHHHHHHhcCCCc--ccCCCCCceEEeCCCCeEEE--
Confidence 788999999999999999996532 35677889999999999986432 36888999999888887766
Q ss_pred cCCCCc----------EEEEcCCC---------------------ccccCCcEEEEEE---eCCEEEEEEEecCChHHH-
Q 013952 359 GDNVGD----------TVLFGDND---------------------LASATHKFGTYWI---KDGKVVGVFLESGTPEEN- 403 (433)
Q Consensus 359 g~~~~~----------~~~~~~~~---------------------~~~~~~~~~~~~~---~~~~l~G~~~~g~~~~~~- 403 (433)
|+++.+ .+...... ....+.+|.|+++ ++++|||+|++|++++|+
T Consensus 408 GlTE~eA~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~vKli~~~~~t~~ILGa~ivG~~A~ElI 487 (542)
T 4b1b_A 408 GYSEEKAYELYGKSNVEVFLQEFNNLEISAVHRQKHIRAQKDEYDLDVSSTCLAKLVCLKNEDNRVIGFHYVGPNAGEVT 487 (542)
T ss_dssp ECCHHHHHHHHCTTTEEEEEC-----------------------------CCCEEEEEETTTTTBEEEEEEESTTHHHHH
T ss_pred eCCHHHHHHhCCCCcEEEEEeeccchhhhhhhhhhhhhcccccccccCCCceEEEEEEEeCCCCEEEEEEEECCCHHHHH
Confidence 665421 11110000 0013457888775 579999999999999996
Q ss_pred HHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 404 KAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
+.++.||+.++|++||..+.-+-+++++
T Consensus 488 ~~~alAi~~~~t~~dl~~~i~~HPTlsE 515 (542)
T 4b1b_A 488 QGMALALRLKVKKKDFDNCIGIHPTDAE 515 (542)
T ss_dssp HHHHHHHHTCCBHHHHHHC---------
T ss_pred HHHHHHHHcCCCHHHHhccCCcCCCHHH
Confidence 9999999999999988766555554443
No 23
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=2.4e-48 Score=381.60 Aligned_cols=395 Identities=20% Similarity=0.215 Sum_probs=283.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC----CCCCCccccccCCC-----------CCCCCC--Ccc
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP----YERPALSKAYLFPE-----------GTARLP--GFH 66 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~----~~~~~~~~~~~~~~-----------~~~~~~--~~~ 66 (433)
++||+|||||++|+++|..|++.|++ |+|||++ ... +..|..++.++... ....++ ...
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~ 82 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFK---TVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVR 82 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCc
Confidence 58999999999999999999999987 9999998 210 00011111111000 000000 000
Q ss_pred cccCC----------CCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCC-C-cEEecceEEEccCCCccccCCCCCC
Q 013952 67 VCVGS----------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSAT-G-LIFKYQILVIATGSTVLRLTDFGVE 134 (433)
Q Consensus 67 ~~~~~----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-~-~~~~~d~lvlAtG~~~~~~~~~~~~ 134 (433)
..... .....+..++++.+++++.++ +..++.....|.+.+ + +++.||+||+|||+.|..|+ ++
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~-~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~---i~ 158 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGY-GKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFP---GI 158 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCT---TC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCC---CC
Confidence 00000 000012345667899999984 445665444566655 4 57999999999999998887 45
Q ss_pred CCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHH
Q 013952 135 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 214 (433)
Q Consensus 135 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l 214 (433)
|.+..++++. .++..+ .. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.++++.+++++.+.+.+.+
T Consensus 159 g~~~~~v~t~---~~~~~~----~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 230 (474)
T 1zmd_A 159 TIDEDTIVSS---TGALSL----KK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRIL 230 (474)
T ss_dssp CCCSSSEECH---HHHTTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHH
T ss_pred CCCcCcEEcH---HHHhhc----cc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHH
Confidence 5544455543 332221 11 478999999999999999999999999999999999988448999999999999
Q ss_pred HhcCcEEEcCCeEEEEEecCCCcEEEEE-----eCCCcEEECCEEEEcccCccChhh--h-hccccc-CCCcEEeCCCCC
Q 013952 215 ANKGIKIIKGTVAVGFTTNADGEVKEVK-----LKDGRTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFK 285 (433)
Q Consensus 215 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~-----~~~g~~i~~d~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~ 285 (433)
++.||+++++++|.++..++++. ..+. ..+++++++|.||+|+|++|++++ + ..++.. ++|+|.||++||
T Consensus 231 ~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~ 309 (474)
T 1zmd_A 231 QKQGFKFKLNTKVTGATKKSDGK-IDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVNTRFQ 309 (474)
T ss_dssp HHTTCEEECSEEEEEEEECTTSC-EEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCCTTCB
T ss_pred HHCCCEEEeCceEEEEEEcCCce-EEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEECcCCc
Confidence 99999999999999998733331 3444 346678999999999999999986 3 346666 468899999999
Q ss_pred CCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCC--
Q 013952 286 TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG-- 363 (433)
Q Consensus 286 t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~-- 363 (433)
|+.|+|||+|||+..+ ..+..|..||+.||.||.+.. .+..|..+|++++..+++ ..+|.++.
T Consensus 310 t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~~~~~--a~vG~~e~~a 374 (474)
T 1zmd_A 310 TKIPNIYAIGDVVAGP----------MLAHKAEDEGIICVEGMAGGA---VHIDYNCVPSVIYTHPEV--AWVGKSEEQL 374 (474)
T ss_dssp CSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTCC---CCCCGGGCCEEECSSSEE--EEEECCHHHH
T ss_pred cCCCCEEEeeecCCCC----------ccHHHHHHHHHHHHHHhcCCC---CcCCCCCCCEEEECCCCe--EEEeCCHHHH
Confidence 9999999999999865 457789999999999999753 225677788877655554 44576642
Q ss_pred ----cEEEEcCCCcc--------ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCC
Q 013952 364 ----DTVLFGDNDLA--------SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLS 428 (433)
Q Consensus 364 ----~~~~~~~~~~~--------~~~~~~~~~~~~--~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (433)
..+..+..+.. ....+|.|++++ +|+|+|+|++|+.++|+ +.++.+|++++|++|+..+.-+-++
T Consensus 375 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt 454 (474)
T 1zmd_A 375 KEEGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPT 454 (474)
T ss_dssp HHHTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTC
T ss_pred HhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCC
Confidence 22332222110 235689998884 79999999999998885 9999999999999988776555555
Q ss_pred cc
Q 013952 429 FA 430 (433)
Q Consensus 429 ~~ 430 (433)
++
T Consensus 455 ~~ 456 (474)
T 1zmd_A 455 LS 456 (474)
T ss_dssp TH
T ss_pred HH
Confidence 44
No 24
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=6.3e-49 Score=386.12 Aligned_cols=394 Identities=22% Similarity=0.261 Sum_probs=285.0
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCC----------------CCCCCccc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGT----------------ARLPGFHV 67 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 67 (433)
++|||+|||||++|++||.+|++.|++ |+|||++..+..+..+.+.+...... ..+..+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~ 78 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLK---TALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGI 78 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCC---EEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCE---EEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 369999999999999999999999987 99999982111111122111110000 00000000
Q ss_pred ccCCC-----------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC--cEEecceEEEccCCCcccc
Q 013952 68 CVGSG-----------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 68 ~~~~~-----------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~ 128 (433)
..... .......++++.+++++.+. +..++.....+...++ .++.||++|+|||+.|..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~ 157 (476)
T 3lad_A 79 STGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGH-GKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEI 157 (476)
T ss_dssp ECSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESE-EEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCC
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCC
Confidence 00000 00011234556799999974 4446655556666666 5799999999999998876
Q ss_pred CCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHH
Q 013952 129 TDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAA 208 (433)
Q Consensus 129 ~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~ 208 (433)
+. ++.+...+++..+.... ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+
T Consensus 158 ~~---~~~~~~~v~~~~~~~~~--------~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~ 225 (476)
T 3lad_A 158 PP---APVDQDVIVDSTGALDF--------QNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA-VDEQVAK 225 (476)
T ss_dssp TT---SCCCSSSEEEHHHHTSC--------SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHH
T ss_pred CC---CCCCcccEEechhhhcc--------ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc-cCHHHHH
Confidence 63 33444566654322211 125789999999999999999999999999999999999885 8999999
Q ss_pred HHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC---cEEECCEEEEcccCccChhhh---hccccc-CCCcEEeC
Q 013952 209 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG---RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETD 281 (433)
Q Consensus 209 ~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g---~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd 281 (433)
.+.+.+++.||+++++++|.+++.++++ ..+.+.++ +++++|.||+|+|++|+++.+ ..++.. ++|+|.||
T Consensus 226 ~l~~~l~~~Gv~v~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd 303 (476)
T 3lad_A 226 EAQKILTKQGLKILLGARVTGTEVKNKQ--VTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVD 303 (476)
T ss_dssp HHHHHHHHTTEEEEETCEEEEEEECSSC--EEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEEcCCE--EEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeC
Confidence 9999999999999999999999873333 44666544 679999999999999999753 345666 56889999
Q ss_pred CCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCC
Q 013952 282 DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDN 361 (433)
Q Consensus 282 ~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~ 361 (433)
+++||+.|+|||+|||++.+ ..+..|..||+++|+||.+... ..+|..+|++.+..++++ .+|++
T Consensus 304 ~~~~t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~~~~a--~vGlt 368 (476)
T 3lad_A 304 DYCATSVPGVYAIGDVVRGA----------MLAHKASEEGVVVAERIAGHKA---QMNYDLIPAVIYTHPEIA--GVGKT 368 (476)
T ss_dssp TTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHCCC---CCCTTCCCEEECSSSEEE--EEECC
T ss_pred CCcccCCCCEEEEEccCCCc----------ccHHHHHHHHHHHHHHhcCCCc---ccCCCCCCEEEECcCCEE--EeeCC
Confidence 99999999999999999655 4678899999999999997542 256778888776555544 45776
Q ss_pred C------CcEEEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcc
Q 013952 362 V------GDTVLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKN 424 (433)
Q Consensus 362 ~------~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 424 (433)
+ +..+..+..+.. ..+.+|.|+++ ++++|||+|++|++++|+ +.++.||++++|++||..+.-
T Consensus 369 e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~ 448 (476)
T 3lad_A 369 EQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVF 448 (476)
T ss_dssp HHHHHHTTCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCC
T ss_pred HHHHHhcCCCEEEEEEeccccchheecCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCcc
Confidence 5 323333332211 23568999887 579999999999998885 999999999999998777655
Q ss_pred cCCCcc
Q 013952 425 EGLSFA 430 (433)
Q Consensus 425 ~~~~~~ 430 (433)
+-++++
T Consensus 449 ~hPt~~ 454 (476)
T 3lad_A 449 AHPALS 454 (476)
T ss_dssp CSSCSH
T ss_pred CCCChH
Confidence 444443
No 25
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2.7e-49 Score=389.09 Aligned_cols=395 Identities=19% Similarity=0.255 Sum_probs=282.5
Q ss_pred CCCcCeEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEcC---------CCC----CCCCCCccccccCCCCC----CCCC
Q 013952 2 AEKSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIISK---------EVA----PYERPALSKAYLFPEGT----ARLP 63 (433)
Q Consensus 2 m~~~~dvvIIGgG~aGl~aA~~l~~-~g~~~~~V~lie~---------~~~----~~~~~~~~~~~~~~~~~----~~~~ 63 (433)
|+.++||+|||||++|++||.+|++ .|++ |+|||+ ... .+..|..++.++..... ...+
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~ 80 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKR---VAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESA 80 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCe---EEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHH
Confidence 3346899999999999999999999 9987 999992 210 00001111111100000 0000
Q ss_pred CcccccCC-----C--------------CCCCCHhHHHhC-CcEEEeCceEEEEECCCCEEEeC---C-----CcEEecc
Q 013952 64 GFHVCVGS-----G--------------GERLLPEWYKEK-GIELILSTEIVRADIASKTLLSA---T-----GLIFKYQ 115 (433)
Q Consensus 64 ~~~~~~~~-----~--------------~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~---~-----~~~~~~d 115 (433)
.+...... + ........+++. +++++.+ .+..++ .++|.+. + ++++.||
T Consensus 81 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~--~~~v~v~~~~~~~~~~~~~~~~d 157 (495)
T 2wpf_A 81 GFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLG-WGSLES--KNVVVVRETADPKSAVKERLQAD 157 (495)
T ss_dssp TTTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEES-EEEEEE--TTEEEEESSSSTTSCEEEEEEEE
T ss_pred hcCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe-EEEEee--CCEEEEeecCCccCCCCeEEEcC
Confidence 00000000 0 000112234566 9999998 466665 4667665 4 6689999
Q ss_pred eEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhC---CCeEEEEc
Q 013952 116 ILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN---NIDVSMVY 192 (433)
Q Consensus 116 ~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~---g~~V~li~ 192 (433)
+||||||++|+.|+ ++|.+ .+++.. ++..+ . ..+++++|||+|++|+|+|..|.+. |.+|++++
T Consensus 158 ~lViATGs~p~~p~---i~G~~--~~~~~~---~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~ 224 (495)
T 2wpf_A 158 HILLATGSWPQMPA---IPGIE--HCISSN---EAFYL----P-EPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCY 224 (495)
T ss_dssp EEEECCCEEECCCC---CTTGG--GCEEHH---HHTTC----S-SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEEeCCCCcCCCC---CCCcc--ccccHH---HHHhh----h-hcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEE
Confidence 99999999998877 56542 234332 22221 1 1478999999999999999999999 99999999
Q ss_pred cCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh---hc
Q 013952 193 PEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF---KG 269 (433)
Q Consensus 193 ~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~---~~ 269 (433)
+.+.+++. +++++.+.+.+.+++.||+++++++|.++..++++ ...+.+.+|+++++|.||+|+|++|+++.+ ..
T Consensus 225 ~~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~ 302 (495)
T 2wpf_A 225 RNNLILRG-FDETIREEVTKQLTANGIEIMTNENPAKVSLNTDG-SKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNV 302 (495)
T ss_dssp SSSSSCTT-SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTS-CEEEEETTSCEEEESEEEECSCEEECCGGGTGGGT
T ss_pred cCCccccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCc-eEEEEECCCcEEEcCEEEECCCCcccccccchhhc
Confidence 99998876 89999999999999999999999999999873223 357888899899999999999999999743 34
Q ss_pred cccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEE
Q 013952 270 QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYS 348 (433)
Q Consensus 270 ~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~ 348 (433)
++.. ++|+|.||+++||+.|+|||+|||++.+ .++..|..||+++|.||.+.... ...|..+|++.+
T Consensus 303 gl~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~ 370 (495)
T 2wpf_A 303 GVKLTPKGGVQVDEFSRTNVPNIYAIGDITDRL----------MLTPVAINEGAALVDTVFGNKPR--KTDHTRVASAVF 370 (495)
T ss_dssp TCCBCTTSSBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCCC--CCCCSSCEEEEC
T ss_pred CccCCCCCCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCCC--cCCCCCCCEEEE
Confidence 5666 4788999999999999999999999643 56788999999999999975321 256777887666
Q ss_pred eecccceEEecCCCC------cEEEEcCCCc--------cccCCcE-EEEEE--eCCEEEEEEEecCChHHH-HHHHHHH
Q 013952 349 RAFDLSWQFYGDNVG------DTVLFGDNDL--------ASATHKF-GTYWI--KDGKVVGVFLESGTPEEN-KAIAKVA 410 (433)
Q Consensus 349 ~~~~~~~~~~g~~~~------~~~~~~~~~~--------~~~~~~~-~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~ 410 (433)
..++++ .+|+++. ..+.....+. .....+| .|+++ ++|+|+|+|++|+.++++ +.++.+|
T Consensus 371 ~~~~~a--~vGl~e~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai 448 (495)
T 2wpf_A 371 SIPPIG--TCGLIEEVAAKEFEKVAVYMSSFTPLMHNISGSKYKKFVAKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCL 448 (495)
T ss_dssp CSSCEE--EEECCHHHHHHHSSEEEEEEEEECCTHHHHHSCTTCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHH
T ss_pred CCCCeE--EEeCCHHHHHhcCCCEEEEEEecCchhhhhhcCCCcEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHH
Confidence 555544 4576642 1222211111 0135689 99888 489999999999999885 9999999
Q ss_pred HcCCCCCChhhhcccCCCccc
Q 013952 411 RVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~ 431 (433)
+.++|++||..+.-+-+++++
T Consensus 449 ~~~~t~~~l~~~~~~hPt~~e 469 (495)
T 2wpf_A 449 RLNAKISDFYNTIGVHPTSAE 469 (495)
T ss_dssp HTTCBHHHHHHSCCCSSCSGG
T ss_pred HCCCCHHHHhhcccCCCChHH
Confidence 999999988876555555544
No 26
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=4e-48 Score=379.41 Aligned_cols=393 Identities=23% Similarity=0.279 Sum_probs=281.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC----CCCCCccccccCCCC----------CCCCC------
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP----YERPALSKAYLFPEG----------TARLP------ 63 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~----~~~~~~~~~~~~~~~----------~~~~~------ 63 (433)
++||+|||||++|++||.+|++.|++ |+|||++ ... +..|..++.++.... ...++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMK---TACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCc
Confidence 48999999999999999999999987 9999998 210 000111111110000 00000
Q ss_pred -Cccccc------CCCCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC--cEEecceEEEccCCCccccCCCCCC
Q 013952 64 -GFHVCV------GSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVE 134 (433)
Q Consensus 64 -~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~~ 134 (433)
.+.... .........+++++.+++++.++.+ .++.....|.+.+| +++.||+||+|||+.|..|+ ++
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~---~~ 154 (468)
T 2qae_A 79 MDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELP---FL 154 (468)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBT---TB
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-EeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCC---CC
Confidence 000000 0000001234556679999998544 47765555666677 68999999999999998887 45
Q ss_pred CCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHH
Q 013952 135 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 214 (433)
Q Consensus 135 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l 214 (433)
|.+..++++ ..++..+ +. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+
T Consensus 155 g~~~~~v~t---~~~~~~~----~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l 225 (468)
T 2qae_A 155 PFDEKVVLS---STGALAL----PR-VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT-LDEDVTNALVGAL 225 (468)
T ss_dssp CCCSSSEEC---HHHHHTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHH
T ss_pred CCCcCceec---hHHHhhc----cc-CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc-CCHHHHHHHHHHH
Confidence 554445553 3333322 11 4789999999999999999999999999999999999885 8999999999999
Q ss_pred -HhcCcEEEcCCeEEEEEecCCCcEEEEEeC--CC--cEEECCEEEEcccCccChhh--h-hccccc-CCCcEEeCCCCC
Q 013952 215 -ANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DG--RTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFK 285 (433)
Q Consensus 215 -~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~--~g--~~i~~d~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~ 285 (433)
++.||+++++++|.+++.++++ ..+.+. +| +++++|.||+|+|++|++++ + ..++.. ++|+|.||+++|
T Consensus 226 ~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~ 303 (468)
T 2qae_A 226 AKNEKMKFMTSTKVVGGTNNGDS--VSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIGDHFE 303 (468)
T ss_dssp HHHTCCEEECSCEEEEEEECSSS--EEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCCTTSB
T ss_pred hhcCCcEEEeCCEEEEEEEcCCe--EEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeECCCcc
Confidence 9999999999999999873333 345554 56 67999999999999999986 3 345666 468899999999
Q ss_pred CCCCCeEEcCcccc-ccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC--
Q 013952 286 TSADDVYAVGDVAT-FPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-- 362 (433)
Q Consensus 286 t~~~~vfa~Gd~~~-~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-- 362 (433)
|+.|+|||+|||+. .+ ..+..|..||+.+|.||.+.. .+..|..+|++.+..+ .+..+|.++
T Consensus 304 t~~~~IyA~GD~~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~~~--~~a~vG~~e~~ 368 (468)
T 2qae_A 304 TSIPDVYAIGDVVDKGP----------MLAHKAEDEGVACAEILAGKP---GHVNYGVIPAVIYTMP--EVASVGKSEDE 368 (468)
T ss_dssp CSSTTEEECGGGBSSSC----------SCHHHHHHHHHHHHHHHTTCC---CCCCTTSCCEEECSSS--EEEEEECCHHH
T ss_pred cCCCCEEEeeccCCCCC----------ccHhHHHHHHHHHHHHHcCCC---ccCCCCCCCEEEECCC--ceEEEeCCHHH
Confidence 99999999999998 44 567789999999999999743 1245667787665544 445557664
Q ss_pred ----CcEEEEcCCCcc--------ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCC
Q 013952 363 ----GDTVLFGDNDLA--------SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 427 (433)
Q Consensus 363 ----~~~~~~~~~~~~--------~~~~~~~~~~~~--~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 427 (433)
+..+..+..+.. ....+|.|++++ +|+|+|+|++|+.++|+ +.++.+|++++|++|+..+.-+-+
T Consensus 369 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~P 448 (468)
T 2qae_A 369 LKKEGVAYKVGKFPFNANSRAKAVSTEDGFVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHP 448 (468)
T ss_dssp HHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred HHhcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 222332221110 235689998884 89999999999998885 999999999999998876654444
Q ss_pred Ccc
Q 013952 428 SFA 430 (433)
Q Consensus 428 ~~~ 430 (433)
+++
T Consensus 449 t~~ 451 (468)
T 2qae_A 449 TMS 451 (468)
T ss_dssp CTH
T ss_pred CHH
Confidence 443
No 27
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.4e-48 Score=383.75 Aligned_cols=396 Identities=20% Similarity=0.230 Sum_probs=281.2
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC-----CCCCccccccCC---------CCCCCCCC--
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPY-----ERPALSKAYLFP---------EGTARLPG-- 64 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~-----~~~~~~~~~~~~---------~~~~~~~~-- 64 (433)
+|+.++||+|||||++|+++|.+|++.|++ |+|||++.... ..+..++.++.. .....++.
T Consensus 2 ~m~~~~dVvIIGaG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~ 78 (482)
T 1ojt_A 2 SADAEYDVVVLGGGPGGYSAAFAAADEGLK---VAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPE 78 (482)
T ss_dssp CSEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 355579999999999999999999999987 99999961110 001111111100 00000000
Q ss_pred --cccc--cC------CCCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC------------cEEecceEEEccC
Q 013952 65 --FHVC--VG------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG------------LIFKYQILVIATG 122 (433)
Q Consensus 65 --~~~~--~~------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~------------~~~~~d~lvlAtG 122 (433)
.... .. ......+..++++.+++++.++.+. ++...-.+...++ .+++||++|+|||
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtG 157 (482)
T 1ojt_A 79 PELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF-LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAG 157 (482)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE-ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCC
Confidence 0000 00 0000011234567899999986554 4432223333344 5799999999999
Q ss_pred CCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCC
Q 013952 123 STVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLF 202 (433)
Q Consensus 123 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~ 202 (433)
+.|..|+. ++ .+ ..++ +..++..+ +. .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +
T Consensus 158 s~p~~~~~--i~-~~-~~v~---~~~~~~~~----~~-~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~-~ 224 (482)
T 1ojt_A 158 SRVTKLPF--IP-ED-PRII---DSSGALAL----KE-VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG-A 224 (482)
T ss_dssp EEECCCSS--CC-CC-TTEE---CHHHHTTC----CC-CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-S
T ss_pred CCCCCCCC--CC-cc-CcEE---cHHHHhcc----cc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-c
Confidence 99987763 33 22 2444 33333222 11 4789999999999999999999999999999999999886 8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC----CcEEECCEEEEcccCccChhhh---hcccccC-
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD----GRTLEADIVVVGVGGRPLISLF---KGQVAEN- 274 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~----g~~i~~d~vi~a~G~~p~~~~~---~~~~~~~- 274 (433)
++++.+.+.+.+++.||+++++++|.+++.+ +....+.+.+ |+++++|.|++|+|++||++++ ..++..+
T Consensus 225 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~--~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~ 302 (482)
T 1ojt_A 225 DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPK--EDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTD 302 (482)
T ss_dssp CHHHHHHHHHHHGGGEEEEECSCEEEEEEEE--TTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCT
T ss_pred CHHHHHHHHHHHHhcCCEEEECCEEEEEEEc--CCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCC
Confidence 9999999999999999999999999999873 2234666666 6789999999999999999873 3456664
Q ss_pred CCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccc
Q 013952 275 KGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLS 354 (433)
Q Consensus 275 ~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~ 354 (433)
+|+|.||++|||+.|+|||+|||++.+ .++..|..||+++|.||.+.. ....|..+|++.+..++++
T Consensus 303 ~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~---~~~~~~~~p~~~~~~~~~a 369 (482)
T 1ojt_A 303 RGFIEVDKQMRTNVPHIYAIGDIVGQP----------MLAHKAVHEGHVAAENCAGHK---AYFDARVIPGVAYTSPEVA 369 (482)
T ss_dssp TSCCCCCTTSBCSSTTEEECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCC---CCCCCCCCCEEECSSSCEE
T ss_pred CCCEeeCCCcccCCCCEEEEEcccCCC----------ccHHHHHHHHHHHHHHHcCCC---ccCCCCCCCEEEEcCCCeE
Confidence 588999999999999999999999854 467789999999999999743 1245667787766555544
Q ss_pred eEEecCCC------CcEEEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCC
Q 013952 355 WQFYGDNV------GDTVLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVE 417 (433)
Q Consensus 355 ~~~~g~~~------~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~ 417 (433)
.+|+++ +..+..+..+.. ....+|.|+++ ++|+|+|+|++|+.++|+ +.++.+|++++|++
T Consensus 370 --~vG~te~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~ 447 (482)
T 1ojt_A 370 --WVGETELSAKASARKITKANFPWAASGRAIANGCDKPFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAA 447 (482)
T ss_dssp --EEECCHHHHHHHTCCEEEEEEEGGGCHHHHHTTCCSCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHH
T ss_pred --EEeCCHHHHHhcCCCEEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 447664 222333222110 23568999988 689999999999998885 99999999999999
Q ss_pred ChhhhcccCCCcc
Q 013952 418 SLDVLKNEGLSFA 430 (433)
Q Consensus 418 ~~~~~~~~~~~~~ 430 (433)
|+..+.-+-++++
T Consensus 448 ~l~~~~~~~Pt~~ 460 (482)
T 1ojt_A 448 DIGKTIHPHPTLG 460 (482)
T ss_dssp HHHTSCCCSSSST
T ss_pred HHhcCccCCCCHH
Confidence 8877655555544
No 28
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=6.6e-49 Score=384.38 Aligned_cols=396 Identities=16% Similarity=0.184 Sum_probs=285.7
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC----CCCCCCccccccCCCC----------CCCCCCcccc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA----PYERPALSKAYLFPEG----------TARLPGFHVC 68 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~----~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 68 (433)
.+|||+|||||++|+++|..|++.|++ |+|||+. .. .+..|..++.++.... ......+...
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~---V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~ 79 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYN---VLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTV 79 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHH
Confidence 469999999999999999999999987 9999966 21 0111111111100000 0000000000
Q ss_pred cC--CC---CC--CCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcE--EecceEEEccCCCccccCCCCCCCCCCC
Q 013952 69 VG--SG---GE--RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLI--FKYQILVIATGSTVLRLTDFGVEGADAK 139 (433)
Q Consensus 69 ~~--~~---~~--~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~--~~~d~lvlAtG~~~~~~~~~~~~g~~~~ 139 (433)
.. .. .. .....++++.+++++.+ .+..+++....|...++++ +.||+||+|||+.|+.|+ ++|.+
T Consensus 80 ~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~---i~G~~-- 153 (466)
T 3l8k_A 80 QDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLR---LPGVE-- 153 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCC---CTTGG--
T ss_pred HHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCC---CCCcc--
Confidence 00 00 00 11223345579999987 7888887767787888888 999999999999998887 46654
Q ss_pred CEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCc
Q 013952 140 NIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGI 219 (433)
Q Consensus 140 ~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV 219 (433)
+++ +..++..+...+.. .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++..+++++.+.+.+.++ |
T Consensus 154 ~~~---t~~~~~~~~~~l~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~---v 226 (466)
T 3l8k_A 154 YCL---TSDDIFGYKTSFRK-LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILK---L 226 (466)
T ss_dssp GSB---CHHHHHSTTCSCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSCCHHHHHHHHHHHC---C
T ss_pred ceE---eHHHHHHHHHHHhh-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCCCCHHHHHHHHhcCE---E
Confidence 232 34444322111222 4789999999999999999999999999999999999987449999999988777 9
Q ss_pred EEEcCCeEEEEEecCCCcEEEEEeC--CCc--EEECCEEEEcccCccChhh--hhccccc-CCCcEEeCCCCCCCCCCeE
Q 013952 220 KIIKGTVAVGFTTNADGEVKEVKLK--DGR--TLEADIVVVGVGGRPLISL--FKGQVAE-NKGGIETDDFFKTSADDVY 292 (433)
Q Consensus 220 ~v~~~~~v~~i~~~~~g~~~~v~~~--~g~--~i~~d~vi~a~G~~p~~~~--~~~~~~~-~~g~i~vd~~~~t~~~~vf 292 (433)
+++++++|.++..++++. ..+.+. +|+ ++++|.|++|+|++|++.+ ...++.. ++| |.||+++||+.|+||
T Consensus 227 ~i~~~~~v~~i~~~~~~~-v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~~~gl~~~~~G-i~vd~~~~t~~~~Iy 304 (466)
T 3l8k_A 227 NIKFNSPVTEVKKIKDDE-YEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAREIGLSISKTG-IVVDETMKTNIPNVF 304 (466)
T ss_dssp CEECSCCEEEEEEEETTE-EEEEECCTTSCCEEEEESCEEECCCEEECCCTTTGGGTCCBCSSS-BCCCTTCBCSSTTEE
T ss_pred EEEECCEEEEEEEcCCCc-EEEEEEecCCceEEEEcCEEEECcCCCcccccchhhcCceeCCCC-EeECCCccCCCCCEE
Confidence 999999999998733133 357776 565 7999999999999999983 3456776 466 999999999999999
Q ss_pred EcCccccccccccCcccccccHHHHHHHHHHHHHHHhcc--CCCCCccCCCCCCeEEEeecccceEEecCCC------Cc
Q 013952 293 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT--EGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GD 364 (433)
Q Consensus 293 a~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~ 364 (433)
|+|||++.+ +++..|..||++||.||++. ... ...+..+|+..+..++++. +|+++ +.
T Consensus 305 a~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~~~--~~~~~~~p~~~~~~~~~a~--vG~te~~a~~~g~ 370 (466)
T 3l8k_A 305 ATGDANGLA----------PYYHAAVRMSIAAANNIMANGMPVD--YVDVKSIPVTIYTIPSLSY--VGILPSKARKMGI 370 (466)
T ss_dssp ECGGGTCSC----------CSHHHHHHHHHHHHHHHHTTTSCCC--CCCSTTSCEEECSSSCEEE--EECCHHHHHHHTC
T ss_pred EEEecCCCC----------ccHhHHHHHHHHHHHHHhCCCCCcc--ccCCCCCcEEEECCCCeEE--ecCCHHHHHhCCC
Confidence 999999874 56888999999999999975 221 2567778877765555544 47665 22
Q ss_pred EEEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 365 TVLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 365 ~~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
.+.....+.. ....+|.|+++ ++|+|||+|++|+.++|+ +.++.||++++|++||..+.-+-+++++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e 448 (466)
T 3l8k_A 371 EIVEAEYNMEEDVSAQIYGQKEGVLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNE 448 (466)
T ss_dssp CEEEEEEEGGGSHHHHHHTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTH
T ss_pred CEEEEEEEcccChhheecCCCeEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHH
Confidence 2322222111 24578999888 469999999999999885 9999999999999988887666666554
No 29
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.4e-49 Score=390.88 Aligned_cols=400 Identities=18% Similarity=0.190 Sum_probs=284.9
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC---CCCCCCccccccCCC----CCCCCCCcccccCCC--
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA---PYERPALSKAYLFPE----GTARLPGFHVCVGSG-- 72 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-- 72 (433)
+.++||+|||||++|++||..|++.|++ |+|||++ .. .+..|..++.++... .......+.......
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~---V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGAR---AAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKF 94 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 3468999999999999999999999987 9999987 20 001111111111000 000000000000000
Q ss_pred ---------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCC
Q 013952 73 ---------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD 137 (433)
Q Consensus 73 ---------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~ 137 (433)
........++..+++++.+ .+..++.....+. .+++++.||+||||||+.|..|....++|.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~~~~~~~~v~-~~g~~~~~d~lviAtG~~p~~p~~~~i~G~~ 172 (478)
T 3dk9_A 95 NWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRG-HAAFTSDPKPTIE-VSGKKYTAPHILIATGGMPSTPHESQIPGAS 172 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEECSCSSCEEE-ETTEEEECSCEEECCCEEECCCCTTTSTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEe-EEEEeeCCeEEEE-ECCEEEEeeEEEEccCCCCCCCCcCCCCCCc
Confidence 0011223345679999987 4555665556666 4667899999999999999887211256643
Q ss_pred CCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhc
Q 013952 138 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 217 (433)
Q Consensus 138 ~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~ 217 (433)
.+ .+..+...+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.
T Consensus 173 --~~---~~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~~~~~l~~~ 241 (478)
T 3dk9_A 173 --LG---ITSDGFFQL----E-ELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS-FDSMISTNCTEELENA 241 (478)
T ss_dssp --GS---BCHHHHTTC----C-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHT
T ss_pred --ee---EchHHhhch----h-hcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc-cCHHHHHHHHHHHHHC
Confidence 11 222222211 1 14789999999999999999999999999999999998875 8999999999999999
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeCC---C----cEEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCCC
Q 013952 218 GIKIIKGTVAVGFTTNADGEVKEVKLKD---G----RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKT 286 (433)
Q Consensus 218 GV~v~~~~~v~~i~~~~~g~~~~v~~~~---g----~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t 286 (433)
||++++++.+++++..+++....+.+.+ | +++++|.|++|+|++|++..+ ..++.. ++|+|.||+++||
T Consensus 242 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t 321 (478)
T 3dk9_A 242 GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQNT 321 (478)
T ss_dssp TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCCTTCBC
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeCCCccc
Confidence 9999999999999874455334566664 2 579999999999999999832 445666 6788999999999
Q ss_pred CCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCC---
Q 013952 287 SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG--- 363 (433)
Q Consensus 287 ~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~--- 363 (433)
+.|+|||+|||++.+ ..+..|..||+++|.||++.... ....|..+|++.+..++++.+ |+++.
T Consensus 322 ~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~p~~a~v--Glte~~a~ 388 (478)
T 3dk9_A 322 NVKGIYAVGDVCGKA----------LLTPVAIAAGRKLAHRLFEYKED-SKLDYNNIPTVVFSHPPIGTV--GLTEDEAI 388 (478)
T ss_dssp SSTTEEECGGGGCSS----------CCHHHHHHHHHHHHHHHHSCCTT-CCCCCTTCCEEECCSSCEEEE--ECCHHHHH
T ss_pred CCCCEEEEEecCCCC----------ccHhHHHHHHHHHHHHHcCCCCc-ccCCCCCCCeEEECCCceEEe--eCCHHHHH
Confidence 999999999999655 56778999999999999976211 236778889887766666555 66642
Q ss_pred -----cEEEE-----cCCCc---cccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCC
Q 013952 364 -----DTVLF-----GDNDL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGL 427 (433)
Q Consensus 364 -----~~~~~-----~~~~~---~~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 427 (433)
..+.. ..... .....+|.|+++ ++++|||+|++|++++|+ +.++.||++++|++||..+.-+-+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hP 468 (478)
T 3dk9_A 389 HKYGIENVKTYSTSFTPMYHAVTKRKTKCVMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHP 468 (478)
T ss_dssp HHHCGGGEEEEEEEECCGGGGGCSSCCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSS
T ss_pred hhCCCccEEEEEeecCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCC
Confidence 11111 11111 123568999887 579999999999999885 999999999999998877666666
Q ss_pred Cccc
Q 013952 428 SFAS 431 (433)
Q Consensus 428 ~~~~ 431 (433)
++++
T Consensus 469 t~~e 472 (478)
T 3dk9_A 469 TSSE 472 (478)
T ss_dssp SSGG
T ss_pred ChHH
Confidence 6554
No 30
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=4.7e-48 Score=378.85 Aligned_cols=391 Identities=18% Similarity=0.178 Sum_probs=280.1
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC---CCCCCCccccccCCC----CCCCCC---CcccccCC
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA---PYERPALSKAYLFPE----GTARLP---GFHVCVGS 71 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~---~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~ 71 (433)
+.++||+|||||++|+++|.+|++.|++ |+|||++ .. .+..|..++.++... .....+ ++......
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 78 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQ---VTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPT 78 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCE---EEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCc
Confidence 3569999999999999999999999886 9999998 10 000000111000000 000000 00000000
Q ss_pred CCCC----------------CCHhHHHhC-CcEEEeCceEEEEECCCCEEEeCCC--cEEecceEEEccCCCccccCCCC
Q 013952 72 GGER----------------LLPEWYKEK-GIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFG 132 (433)
Q Consensus 72 ~~~~----------------~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~ 132 (433)
.... ...+++++. +++++.+ .+..++.....|.+.++ ++++||+||+|||++|+.|+
T Consensus 79 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~--- 154 (467)
T 1zk7_A 79 IDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPP--- 154 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCC---
T ss_pred cCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCC---
Confidence 0000 123445556 9999987 57778866556777777 67999999999999998887
Q ss_pred CCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHH
Q 013952 133 VEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEG 212 (433)
Q Consensus 133 ~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~ 212 (433)
++|.+...++ +..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ +++++.+.+.+
T Consensus 155 i~G~~~~~~~---~~~~~~~~----~-~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~~~~~~~~l~~ 224 (467)
T 1zk7_A 155 IPGLKESPYW---TSTEALAS----D-TIPERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR--EDPAIGEAVTA 224 (467)
T ss_dssp CTTTTTSCCB---CHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT--SCHHHHHHHHH
T ss_pred CCCCCcCcee---cHHHHhcc----c-ccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC--CCHHHHHHHHH
Confidence 5665443443 33333222 1 1479999999999999999999999999999999999888 79999999999
Q ss_pred HHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCCCCC
Q 013952 213 YYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSA 288 (433)
Q Consensus 213 ~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~ 288 (433)
.+++.||+++++++|.++.. ++....+.+. +.++++|.||+|+|++|+++++ ..++.. .+|+|.||+++||+.
T Consensus 225 ~l~~~Gv~i~~~~~v~~i~~--~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~t~~ 301 (467)
T 1zk7_A 225 AFRAEGIEVLEHTQASQVAH--MDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVIDQGMRTSN 301 (467)
T ss_dssp HHHHTTCEEETTCCEEEEEE--ETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCCTTCBCSS
T ss_pred HHHhCCCEEEcCCEEEEEEE--eCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEECCCcccCC
Confidence 99999999999999999986 3334566666 4589999999999999998743 345666 467799999999999
Q ss_pred CCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC------
Q 013952 289 DDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------ 362 (433)
Q Consensus 289 ~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------ 362 (433)
|+|||+|||+..+ ..+..|..||+.+|.||.+.. ....+..+|++....+. +..+|.++
T Consensus 302 ~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~~~~--~a~vG~~~~~a~~~ 366 (467)
T 1zk7_A 302 PNIYAAGDCTDQP----------QFVYVAAAAGTRAAINMTGGD---AALDLTAMPAVVFTDPQ--VATVGYSEAEAHHD 366 (467)
T ss_dssp TTEEECSTTBSSC----------CCHHHHHHHHHHHHHHHTTCC---CCCCCTTCEEEECSSSE--EEEEECCHHHHHHT
T ss_pred CCEEEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCC---cccCCCCCCEEEecCCc--eEEEecCHHHHHhc
Confidence 9999999999865 357789999999999998752 12566677876655444 44457654
Q ss_pred CcEEEEcCCCc--------cccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCC
Q 013952 363 GDTVLFGDNDL--------ASATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLS 428 (433)
Q Consensus 363 ~~~~~~~~~~~--------~~~~~~~~~~~~~--~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (433)
+..+.....+. .....+|.|++++ +|+|+|+|++|+.++++ +.++.+|++++|++|+..+.-+-++
T Consensus 367 g~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt 443 (467)
T 1zk7_A 367 GIETDSRTLTLDNVPRALANFDTRGFIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLT 443 (467)
T ss_dssp TCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTS
T ss_pred CCCeEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCC
Confidence 22222221111 1235689998884 89999999999998885 9999999999999866554443333
No 31
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=5e-49 Score=385.12 Aligned_cols=395 Identities=21% Similarity=0.253 Sum_probs=286.3
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC---CCCCCccccccCCCC----CCCCCCcccccCC-
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP---YERPALSKAYLFPEG----TARLPGFHVCVGS- 71 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~- 71 (433)
|++.++||+|||||++|+++|.+|++.|++ |+|||+. ... +..|..++.++.... ....+.+......
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~---V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~ 77 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKK---VAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES 77 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCE---EEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 555579999999999999999999999987 9999996 110 000111111000000 0000000000000
Q ss_pred ----------------CCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEe-CCCcEEecceEEEccCCCcc-ccCCCCC
Q 013952 72 ----------------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLS-ATGLIFKYQILVIATGSTVL-RLTDFGV 133 (433)
Q Consensus 72 ----------------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~-~~~~~~~~d~lvlAtG~~~~-~~~~~~~ 133 (433)
.....+..++++.+++++.+ .+..++ .+.+.+ .+++++.||++|+|||+.|. .|+ +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~~~~~~~~~~d~lviAtG~~p~~~p~---i 151 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELAG--PNTVKLLASGKTVTAERIVIAVGGHPSPHDA---L 151 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEESS--SSEEEETTTTEEEEEEEEEECCCEEECCCTT---S
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEee--CCEEEEecCCeEEEeCEEEEecCCCcccCCC---C
Confidence 00011233455679999987 555543 467777 56788999999999999998 776 5
Q ss_pred CCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHH
Q 013952 134 EGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGY 213 (433)
Q Consensus 134 ~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~ 213 (433)
+|.+ .++ +..+...+ ...+++++|||+|++|+|+|..+.+.|.+|+++++.+.+++. +++++.+.+.+.
T Consensus 152 ~G~~--~~~---~~~~~~~~-----~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~-~~~~~~~~l~~~ 220 (463)
T 4dna_A 152 PGHE--LCI---TSNEAFDL-----PALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR-FDQDMRRGLHAA 220 (463)
T ss_dssp TTGG--GCB---CHHHHTTC-----SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHH
T ss_pred CCcc--ccc---cHHHHhhh-----hcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHH
Confidence 6643 122 22222221 114789999999999999999999999999999999988875 799999999999
Q ss_pred HHhcCcEEEcCCeEEEEEecCCCcEEEEE-eCCCcEEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCCCCC
Q 013952 214 YANKGIKIIKGTVAVGFTTNADGEVKEVK-LKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSA 288 (433)
Q Consensus 214 l~~~GV~v~~~~~v~~i~~~~~g~~~~v~-~~~g~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~ 288 (433)
+++.||+++++++|.++..++++. ..|. +.+|+ +++|.||+|+|++|++.++ ..++.. ++|+|.||+++||+.
T Consensus 221 l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~ 298 (463)
T 4dna_A 221 MEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVDAFSRTST 298 (463)
T ss_dssp HHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCCTTCBCSS
T ss_pred HHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeECcCCCCCC
Confidence 999999999999999998743443 4688 88887 9999999999999999863 446666 578899999999999
Q ss_pred CCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC------
Q 013952 289 DDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------ 362 (433)
Q Consensus 289 ~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------ 362 (433)
|+|||+|||++.+ +++..|..||+++|+||++.... ...+..+|++++..++++.+ |+++
T Consensus 299 ~~iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~a~v--G~te~~a~~~ 364 (463)
T 4dna_A 299 PGIYALGDVTDRV----------QLTPVAIHEAMCFIETEYKNNPT--SPDHDLIATAVFSQPEIGTV--GITEEEAARK 364 (463)
T ss_dssp TTEEECSGGGSSC----------CCHHHHHHHHHHHHHHHHSSCCC--CCCCSCCCEEECSSSCEEEE--ECCHHHHHHH
T ss_pred CCEEEEEecCCCC----------CChHHHHHHHHHHHHHHcCCCCc--ccCCCCCCEEEECCCCeEEe--cCCHHHHHHc
Confidence 9999999999854 56788999999999999975432 25777889887766655554 7665
Q ss_pred CcEEEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 363 GDTVLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 363 ~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
+..+..+..+.. ..+.+|.|+++ ++++|||+|++|++++|+ +.++.||++++|++||..+.-+-+++++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 444 (463)
T 4dna_A 365 FQEIEVYRAEFRPMKATLSGRKEKTIMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAE 444 (463)
T ss_dssp SSEEEEEEEEECCTTHHHHCCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGG
T ss_pred CCCeEEEEEeccccchhhcCCCceEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHH
Confidence 222222222111 23568999887 579999999999999885 9999999999999988776665555544
No 32
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.8e-48 Score=384.05 Aligned_cols=391 Identities=24% Similarity=0.304 Sum_probs=277.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC----CCCCCCccccccCCCCC-----CCCCCcccccCCC--
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA----PYERPALSKAYLFPEGT-----ARLPGFHVCVGSG-- 72 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-- 72 (433)
++||+|||||+||++||..|++.|++ |+|||+. .. .+..|..++.++..... ..+..+.......
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMK---VAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKL 101 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCcc
Confidence 58999999999999999999999987 9999986 21 00111111111100000 0000000000000
Q ss_pred ---------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC--cEEecceEEEccCCCccccCCCCCCC
Q 013952 73 ---------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVEG 135 (433)
Q Consensus 73 ---------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~~g 135 (433)
.......++++.+++++.+. ...+++....|...++ .++.||+||||||+.|. + +||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p~--~---ipg 175 (491)
T 3urh_A 102 NLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGT-GKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDVA--G---IPG 175 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECSSSEEEEECTTSCEEEEECSEEEECCCEECC--C---BTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEecCCEEEEEeCCCceEEEEeCEEEEccCCCCC--C---CCC
Confidence 00112334566899999874 4445544445555566 57999999999999863 3 233
Q ss_pred CC----CCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHH
Q 013952 136 AD----AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYE 211 (433)
Q Consensus 136 ~~----~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~ 211 (433)
.. ...+++ ..+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.
T Consensus 176 ~~~~~~~~~~~~---~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~ 246 (491)
T 3urh_A 176 VEVAFDEKTIVS---STGALAL-----EKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-MDGEVAKQLQ 246 (491)
T ss_dssp BCCCCCSSSEEC---HHHHTSC-----SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-SCHHHHHHHH
T ss_pred cccccCCeeEEe---hhHhhhh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-CCHHHHHHHH
Confidence 32 233443 2222211 125799999999999999999999999999999999999886 7999999999
Q ss_pred HHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEECCEEEEcccCccChhhh---hccccc-CCCcEEeCC
Q 013952 212 GYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDD 282 (433)
Q Consensus 212 ~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---g--~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~ 282 (433)
+.+++.||++++++++.++..++++ ..+.+.+ | +++++|.||+|+|++|+++++ ..++.. ++|+|.||+
T Consensus 247 ~~l~~~gV~v~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~ 324 (491)
T 3urh_A 247 RMLTKQGIDFKLGAKVTGAVKSGDG--AKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEIDR 324 (491)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETTE--EEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCCT
T ss_pred HHHHhCCCEEEECCeEEEEEEeCCE--EEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeECC
Confidence 9999999999999999999873332 3455542 4 579999999999999999853 446666 578899999
Q ss_pred CCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC
Q 013952 283 FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV 362 (433)
Q Consensus 283 ~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 362 (433)
++||+.|+|||+|||++.+ ..+..|..||+.+|.||++... ...+..+|++.+..++++ .+|+++
T Consensus 325 ~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~---~~~~~~~p~~~~~~p~~a--~vGlte 389 (491)
T 3urh_A 325 HFQTSIAGVYAIGDVVRGP----------MLAHKAEDEGVAVAEIIAGQAG---HVNYDVIPGVVYTQPEVA--SVGKTE 389 (491)
T ss_dssp TCBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHTTSCC---CCCTTCCCEEECSSSCEE--EEECCH
T ss_pred CCCCCCCCEEEEEecCCCc----------cchhHHHHHHHHHHHHHcCCCc---ccCCCCCCEEEEccCCeE--EEeCCH
Confidence 9999999999999999765 5678899999999999997542 256778888776555544 447765
Q ss_pred ------CcEEEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhccc
Q 013952 363 ------GDTVLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNE 425 (433)
Q Consensus 363 ------~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 425 (433)
+..+..+..+.. ..+.+|.|+++ ++|+|||+|++|+.++|+ +.++.||++++|++||..+.-+
T Consensus 390 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~ 469 (491)
T 3urh_A 390 EELKAAGVAYKIGKFPFTANGRARAMLQTDGFVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHA 469 (491)
T ss_dssp HHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCC
T ss_pred HHHHhCCCCEEEEEEecCcchhhhcCCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccC
Confidence 333333332211 23568999887 579999999999999885 9999999999999988776655
Q ss_pred CCCcc
Q 013952 426 GLSFA 430 (433)
Q Consensus 426 ~~~~~ 430 (433)
-++++
T Consensus 470 hPt~~ 474 (491)
T 3urh_A 470 HPTMS 474 (491)
T ss_dssp SSCTT
T ss_pred CCChH
Confidence 44443
No 33
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=8e-48 Score=379.92 Aligned_cols=394 Identities=19% Similarity=0.184 Sum_probs=287.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEcCCCC----CCCCCCccccccCC---------CCCCCCCCcccc
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEVA----PYERPALSKAYLFP---------EGTARLPGFHVC 68 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~---g~~~~~V~lie~~~~----~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 68 (433)
++||+|||||++|++||.+|++. |++ |+|||++.. ....+..++.++.. .....++.+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~---V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~ 78 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQ---VTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDD 78 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEE---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC-----
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCE---EEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 38999999999999999999998 876 999999820 00011111111110 000011000000
Q ss_pred cCCC--------------CCCCCHhHHHhCCcEEEeCceEEEEECC----CC--EEEeCCCc--EEecceEEEccCCCcc
Q 013952 69 VGSG--------------GERLLPEWYKEKGIELILSTEIVRADIA----SK--TLLSATGL--IFKYQILVIATGSTVL 126 (433)
Q Consensus 69 ~~~~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~~~--~~~~d~lvlAtG~~~~ 126 (433)
...+ ....+.+++++.+++++.+ .+..+++. ++ .|...+++ ++.||+||+|||+.|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p~ 157 (499)
T 1xdi_A 79 AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAG-RGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPR 157 (499)
T ss_dssp -CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-EEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEEC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCCC
Confidence 0000 0001245566789999998 47777762 13 34455665 7999999999999998
Q ss_pred ccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHH
Q 013952 127 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 206 (433)
Q Consensus 127 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~ 206 (433)
.|+ ++|.+..++++..+..+.. ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++
T Consensus 158 ~p~---i~g~~~~~v~~~~~~~~~~--------~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~ 225 (499)
T 1xdi_A 158 ILP---SAQPDGERILTWRQLYDLD--------ALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-EDADA 225 (499)
T ss_dssp CCG---GGCCCSSSEEEGGGGGGCS--------SCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-SSHHH
T ss_pred CCC---CCCCCcCcEEehhHhhhhh--------ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHH
Confidence 887 4666555677655443321 14789999999999999999999999999999999999887 89999
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh--h-hccccc-CCCcEEeCC
Q 013952 207 AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDD 282 (433)
Q Consensus 207 ~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~ 282 (433)
.+.+.+.+++.||+++++++|+++..++ +. ..+.+.+|+++++|.||+|+|++|++++ + ..++.. ++|+|.||+
T Consensus 226 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~-v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd~ 303 (499)
T 1xdi_A 226 ALVLEESFAERGVRLFKNARAASVTRTG-AG-VLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDR 303 (499)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEECS-SS-EEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCCS
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEEEeC-CE-EEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEECC
Confidence 9999999999999999999999998732 23 4677888889999999999999999987 3 335666 458899999
Q ss_pred CCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC
Q 013952 283 FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV 362 (433)
Q Consensus 283 ~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~ 362 (433)
+|||+.|+|||+|||++.+ ..+..|..||+++|.||.+... ....|..+|++++..++ +..+|.++
T Consensus 304 ~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~--~~~~~~~~p~~~~~~~~--~a~vG~~e 369 (499)
T 1xdi_A 304 VSRTLATGIYAAGDCTGLL----------PLASVAAMQGRIAMYHALGEGV--SPIRLRTVAATVFTRPE--IAAVGVPQ 369 (499)
T ss_dssp SSBCSSTTEEECSGGGTSC----------SCHHHHHHHHHHHHHHHTTCCC--CCCCGGGCEEEECSSSE--EEEEESCH
T ss_pred CcccCCCCEEEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCCC--ccCCCCCCcEEEEecCC--ceEeCCCH
Confidence 9999999999999999865 4577899999999999997521 12557778887755454 44557665
Q ss_pred C------cEEEEcCCCc--------cccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhccc
Q 013952 363 G------DTVLFGDNDL--------ASATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNE 425 (433)
Q Consensus 363 ~------~~~~~~~~~~--------~~~~~~~~~~~~~--~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 425 (433)
. ..+..+..+. .....+|.|++++ +|+|+|++++|+.++++ +.++.+|++++|++|+..+.-+
T Consensus 370 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~ 449 (499)
T 1xdi_A 370 SVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAV 449 (499)
T ss_dssp HHHHHTSSCEEEEEEESTTSHHHHHTTCSSCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCC
T ss_pred HHHHhCCCCEEEEEEecCcccceeecCCCceEEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhccccc
Confidence 2 2232222111 1235689998884 79999999999998884 9999999999999988776555
Q ss_pred CCCcc
Q 013952 426 GLSFA 430 (433)
Q Consensus 426 ~~~~~ 430 (433)
-++++
T Consensus 450 ~Pt~~ 454 (499)
T 1xdi_A 450 YPSLS 454 (499)
T ss_dssp SSSTH
T ss_pred CCCch
Confidence 55544
No 34
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.1e-47 Score=373.78 Aligned_cols=393 Identities=19% Similarity=0.194 Sum_probs=283.5
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCccccccCCCC----CC-CCCCcccccCC-
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYE-----RPALSKAYLFPEG----TA-RLPGFHVCVGS- 71 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~-----~~~~~~~~~~~~~----~~-~~~~~~~~~~~- 71 (433)
+.++||+|||||++|+++|.+|++.|++ |+|||++. ... .|.+++.++.... .. ..+.+......
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~ 77 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQK---CALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTIN 77 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCC---EEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEE
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCe---EEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 3568999999999999999999999887 99999981 111 0111111110000 00 00000000000
Q ss_pred --C--------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCC
Q 013952 72 --G--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEG 135 (433)
Q Consensus 72 --~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g 135 (433)
+ ....+...+.+.+++++.+. +..++. ++|.+ +++++.||+||+|||++|..|+ +||
T Consensus 78 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~i~~--~~v~~-~g~~~~~d~lviAtGs~p~~p~---i~g 150 (450)
T 1ges_A 78 KFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGF-ARFVDA--KTLEV-NGETITADHILIATGGRPSHPD---IPG 150 (450)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-CEEEET--TEEEE-TTEEEEEEEEEECCCEEECCCC---STT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecC--CEEEE-CCEEEEeCEEEECCCCCCCCCC---CCC
Confidence 0 00011233466899999984 455654 56777 6778999999999999998877 465
Q ss_pred CCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHH
Q 013952 136 ADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA 215 (433)
Q Consensus 136 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~ 215 (433)
.+ .+ .+..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.++
T Consensus 151 ~~--~~---~~~~~~~~~----~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~ 219 (450)
T 1ges_A 151 VE--YG---IDSDGFFAL----P-ALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS-FDPMISETLVEVMN 219 (450)
T ss_dssp GG--GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHH
T ss_pred cc--ce---ecHHHhhhh----h-hcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh-hhHHHHHHHHHHHH
Confidence 42 12 233333322 1 14789999999999999999999999999999999988875 89999999999999
Q ss_pred hcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh--h-hccccc-CCCcEEeCCCCCCCCCCe
Q 013952 216 NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFKTSADDV 291 (433)
Q Consensus 216 ~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~t~~~~v 291 (433)
+.||+++++++|.+++.++++ ...+.+.+|+++++|.||+|+|++|+++. + ..++.. ++|+|.||+++||+.|+|
T Consensus 220 ~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd~~~~t~~~~I 298 (450)
T 1ges_A 220 AEGPQLHTNAIPKAVVKNTDG-SLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGI 298 (450)
T ss_dssp HHSCEEECSCCEEEEEECTTS-CEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCCTTSBCSSTTE
T ss_pred HCCCEEEeCCEEEEEEEeCCc-EEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeECCCCccCCCCE
Confidence 999999999999999873333 34688889989999999999999999973 2 346666 478899999999999999
Q ss_pred EEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCC--------
Q 013952 292 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVG-------- 363 (433)
Q Consensus 292 fa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~-------- 363 (433)
||+|||++.+ .++..|..||+.+|.||.+.... ....|..+|++++..++++.+ |+++.
T Consensus 299 yA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~~~~a~v--G~~e~~a~~~~g~ 365 (450)
T 1ges_A 299 YAVGDNTGAV----------ELTPVAVAAGRRLSERLFNNKPD-EHLDYSNIPTVVFSHPPIGTV--GLTEPQAREQYGD 365 (450)
T ss_dssp EECSGGGTSC----------CCHHHHHHHHHHHHHHHHTTCTT-CCCCCSSCCEEECCSSCEEEE--ECCHHHHHHHHCG
T ss_pred EEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCCCc-ccCCCCCCCeEEECCCceEEE--eCCHHHHHhcCCC
Confidence 9999998754 56788999999999999974321 114677788877766665555 65431
Q ss_pred cEEEEcCCCc--------cccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 364 DTVLFGDNDL--------ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 364 ~~~~~~~~~~--------~~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
..+.....+. .....+|.|+++ ++++|+|+|++|+.++++ +.++.+|+.++|++||..+.-+-+++++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 444 (450)
T 1ges_A 366 DQVKVYKSSFTAMYTAVTTHRQPCRMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAE 444 (450)
T ss_dssp GGEEEEEEEEECHHHHTSSSCCEEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGG
T ss_pred CcEEEEEEECchhhHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHH
Confidence 1122211111 123457888887 489999999999999885 9999999999999988877666666554
No 35
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=6.6e-48 Score=377.50 Aligned_cols=392 Identities=21% Similarity=0.242 Sum_probs=279.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCC-----CCCccccccCC----------CCCCCCC-Ccccc
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYE-----RPALSKAYLFP----------EGTARLP-GFHVC 68 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~-----~~~~~~~~~~~----------~~~~~~~-~~~~~ 68 (433)
++||+|||||++|+++|..|++.|++ |+|||++ .... .+..++.++.. .....++ .....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~---V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~ 78 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLS---TAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFD 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccC
Confidence 68999999999999999999999987 9999998 1100 00111111100 0000000 00000
Q ss_pred cC----------CCCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC--cEEecceEEEccCCCccccCCCCCCCC
Q 013952 69 VG----------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVEGA 136 (433)
Q Consensus 69 ~~----------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~~g~ 136 (433)
.. ......+.+.+++.+++++.++.+. ++.....+.+.++ +++.||+||+|||+.|+.|+. ++.
T Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~---~g~ 154 (464)
T 2a8x_A 79 YGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF-ADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPG---TSL 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE-SSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTT---CCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCC---CCC
Confidence 00 0000012345567899999986543 4433334555666 689999999999999988773 554
Q ss_pred CCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHh
Q 013952 137 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 216 (433)
Q Consensus 137 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~ 216 (433)
+.. ++ +..++..+ +. .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+++
T Consensus 155 ~~~-~~---~~~~~~~~----~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~ 224 (464)
T 2a8x_A 155 SAN-VV---TYEEQILS----RE-LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN-EDADVSKEIEKQFKK 224 (464)
T ss_dssp BTT-EE---CHHHHHTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred Cce-EE---ecHHHhhc----cc-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc-cCHHHHHHHHHHHHH
Confidence 322 43 33333322 11 4789999999999999999999999999999999999885 899999999999999
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeC-CC--cEEECCEEEEcccCccChhh--h-hccccc-CCCcEEeCCCCCCCCC
Q 013952 217 KGIKIIKGTVAVGFTTNADGEVKEVKLK-DG--RTLEADIVVVGVGGRPLISL--F-KGQVAE-NKGGIETDDFFKTSAD 289 (433)
Q Consensus 217 ~GV~v~~~~~v~~i~~~~~g~~~~v~~~-~g--~~i~~d~vi~a~G~~p~~~~--~-~~~~~~-~~g~i~vd~~~~t~~~ 289 (433)
.||+++++++|.++..++++ ..+.+. +| +++++|.|++|+|++||+++ + ..++.. ++|+|.||++|||+.|
T Consensus 225 ~gv~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~t~~~ 302 (464)
T 2a8x_A 225 LGVTILTATKVESIADGGSQ--VTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVDDYMRTNVG 302 (464)
T ss_dssp HTCEEECSCEEEEEEECSSC--EEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCCTTSBCSST
T ss_pred cCCEEEeCcEEEEEEEcCCe--EEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeECcCCccCCC
Confidence 99999999999999873222 345554 56 67999999999999999986 3 345666 4688999999999999
Q ss_pred CeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCc-cCCCCCCeEEEeecccceEEecCCC------
Q 013952 290 DVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTV-TGYDYLPYFYSRAFDLSWQFYGDNV------ 362 (433)
Q Consensus 290 ~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~g~~~------ 362 (433)
+|||+|||++.+ ..+..|..||+.+|.||.+... .+ ..|..+|++.+..++ +..+|.++
T Consensus 303 ~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~--~~~~~~~~~p~~~~~~~~--~a~vG~~e~~a~~~ 368 (464)
T 2a8x_A 303 HIYAIGDVNGLL----------QLAHVAEAQGVVAAETIAGAET--LTLGDHRMLPRATFCQPN--VASFGLTEQQARNE 368 (464)
T ss_dssp TEEECGGGGCSS----------CSHHHHHHHHHHHHHHHHTCCC--CCCCCGGGSCEEECSSSE--EEEEECCHHHHHHT
T ss_pred CEEEeECcCCCc----------cCHHHHHHHHHHHHHHhcCCCC--cccCCCCCCCEEEECCCC--eEEEcCCHHHHHhc
Confidence 999999999864 4577899999999999997321 12 456678877655444 44557654
Q ss_pred CcEEEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHH-HHHHHHHHHcCCCCCChhhhcccCCCcc
Q 013952 363 GDTVLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFA 430 (433)
Q Consensus 363 ~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (433)
+..+..+..+.. ....+|.|+++ ++|+|+|+|++|+.++| ++.++.+|++++|++|+..+.-+-++|+
T Consensus 369 g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~ 447 (464)
T 2a8x_A 369 GYDVVVAKFPFTANAKAHGVGDPSGFVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMS 447 (464)
T ss_dssp TCCEEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTT
T ss_pred CCCEEEEEEEcchhhhhhhcCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChH
Confidence 222332222110 23568999888 48999999999999887 5999999999999998876655544444
No 36
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=4.3e-48 Score=380.40 Aligned_cols=397 Identities=22% Similarity=0.285 Sum_probs=280.0
Q ss_pred CCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC----CCCCCccccccCCCCC-----CCCC--Ccccc-
Q 013952 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP----YERPALSKAYLFPEGT-----ARLP--GFHVC- 68 (433)
Q Consensus 2 m~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~----~~~~~~~~~~~~~~~~-----~~~~--~~~~~- 68 (433)
|+.++||+|||||++|+++|..|++.|++ |+|||++ ... ...|..++.++..... .... ++...
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~---V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~ 78 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFN---TACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNG 78 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECS
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCC
Confidence 44578999999999999999999999987 9999996 210 0000111111100000 0000 00000
Q ss_pred -cCCC--------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC--cE------EecceEEEccCCCc
Q 013952 69 -VGSG--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LI------FKYQILVIATGSTV 125 (433)
Q Consensus 69 -~~~~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~------~~~d~lvlAtG~~~ 125 (433)
...+ ....+..++++.+++++.++.+. .+.....|.+.++ ++ ++||+||+|||+.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 79 DIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF-EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE-SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 0000 00012345567899999986654 2322223445555 56 99999999999988
Q ss_pred cccCCCCCCCCCC--CCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCC
Q 013952 126 LRLTDFGVEGADA--KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFT 203 (433)
Q Consensus 126 ~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~ 203 (433)
+.+ |+... ..++ +..++..+ +. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. ++
T Consensus 158 ~~~-----~g~~~~~~~v~---~~~~~~~~----~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~ 223 (478)
T 1v59_A 158 TPF-----PGIEIDEEKIV---SSTGALSL----KE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-MD 223 (478)
T ss_dssp CCC-----TTCCCCSSSEE---CHHHHTTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-SC
T ss_pred CCC-----CCCCCCCceEE---cHHHHHhh----hc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-cC
Confidence 432 33222 2344 33333322 11 4789999999999999999999999999999999999884 89
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC-----CCcEEECCEEEEcccCccChh--hh-hccccc-C
Q 013952 204 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-----DGRTLEADIVVVGVGGRPLIS--LF-KGQVAE-N 274 (433)
Q Consensus 204 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~-----~g~~i~~d~vi~a~G~~p~~~--~~-~~~~~~-~ 274 (433)
+++.+.+.+.+++.||+++++++|.++...+++....+.+. +++++++|.||+|+|++|+++ ++ ..++.. +
T Consensus 224 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~ 303 (478)
T 1v59_A 224 GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDK 303 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCT
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCC
Confidence 99999999999999999999999999986213334456654 346799999999999999997 44 345666 4
Q ss_pred CCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccc
Q 013952 275 KGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLS 354 (433)
Q Consensus 275 ~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~ 354 (433)
+|+|.||++|||+.|+|||+|||+..+ ..+..|..||+.+|.||.+... +.+|..+|++++..++++
T Consensus 304 ~G~i~vd~~~~t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~p~~~~~~~~~a 370 (478)
T 1v59_A 304 RGRLVIDDQFNSKFPHIKVVGDVTFGP----------MLAHKAEEEGIAAVEMLKTGHG---HVNYNNIPSVMYSHPEVA 370 (478)
T ss_dssp TSCBCCCTTSBCSSTTEEECGGGSSSC----------CCHHHHHHHHHHHHHHHHHSCC---CCCTTSCCEEECSSSEEE
T ss_pred CCCEeECcCCccCCCCEEEeeccCCCc----------ccHHHHHHHHHHHHHHHcCCCC---CCCCCCCCEEEEcCCcEE
Confidence 788999999999999999999999865 4577899999999999997432 256788898887766665
Q ss_pred eEEecCCC------CcEEEEcCCCc-----c---ccCCcEEEEEEe--CCEEEEEEEecCChHH-HHHHHHHHHcCCCCC
Q 013952 355 WQFYGDNV------GDTVLFGDNDL-----A---SATHKFGTYWIK--DGKVVGVFLESGTPEE-NKAIAKVARVQPSVE 417 (433)
Q Consensus 355 ~~~~g~~~------~~~~~~~~~~~-----~---~~~~~~~~~~~~--~~~l~G~~~~g~~~~~-~~~~~~~~~~~~~~~ 417 (433)
.+ |.++ +..+.....+. . ....+|.|+++. +|+|+|+|++|+.+.+ ++.++.+|++++|++
T Consensus 371 ~v--G~~e~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~ 448 (478)
T 1v59_A 371 WV--GKTEEQLKEAGIDYKIGKFPFAANSRAKTNQDTEGFVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAE 448 (478)
T ss_dssp EE--ECCHHHHHHTTCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHH
T ss_pred EE--ECCHHHHHHcCCCEEEEEEecccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 44 6654 22233222211 0 234678888773 8999999999999877 599999999999999
Q ss_pred ChhhhcccCCCccc
Q 013952 418 SLDVLKNEGLSFAS 431 (433)
Q Consensus 418 ~~~~~~~~~~~~~~ 431 (433)
|+..+..+-+++++
T Consensus 449 ~l~~~~~~~Pt~~e 462 (478)
T 1v59_A 449 DVARVCHAHPTLSE 462 (478)
T ss_dssp HHHTSCCCTTCTTH
T ss_pred HHhhCCCCCCCHHH
Confidence 88877666555543
No 37
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=3.1e-48 Score=381.44 Aligned_cols=392 Identities=21% Similarity=0.253 Sum_probs=285.4
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC---CCCCCCccccccCCCC----CCCCCCcccccCC----
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA---PYERPALSKAYLFPEG----TARLPGFHVCVGS---- 71 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---- 71 (433)
.++||+|||||++|++||.+|+++|++ |+|||+. .. .+..|..++.++.... ....+.+......
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 101 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKR---VAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFN 101 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCE---EEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccC
Confidence 468999999999999999999999987 9999996 11 0000111111100000 0000000000000
Q ss_pred -------------CCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeC-CCcEEecceEEEccCCCcc-ccCCCCCCCC
Q 013952 72 -------------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSA-TGLIFKYQILVIATGSTVL-RLTDFGVEGA 136 (433)
Q Consensus 72 -------------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~~~~~~~d~lvlAtG~~~~-~~~~~~~~g~ 136 (433)
.....+...+.+.+++++.+ .+..++ .+.+.+. ++.++.||++|+|||+.|. .|+ ++|.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~~~v~v~~~~~~~~~d~lviAtG~~p~~~p~---i~G~ 175 (484)
T 3o0h_A 102 WEKLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--EHTLELSVTGERISAEKILIATGAKIVSNSA---IKGS 175 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEETTTCCEEEEEEEEECCCEEECCC-----CBTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--CCEEEEecCCeEEEeCEEEEccCCCcccCCC---CCCc
Confidence 00011234456689999997 566665 4567776 7788999999999999988 776 4554
Q ss_pred CCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHh
Q 013952 137 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 216 (433)
Q Consensus 137 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~ 216 (433)
+ .+++..+..... ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++
T Consensus 176 ~--~~~~~~~~~~~~--------~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l~~ 244 (484)
T 3o0h_A 176 D--LCLTSNEIFDLE--------KLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN-FDYDLRQLLNDAMVA 244 (484)
T ss_dssp G--GSBCTTTGGGCS--------SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred c--ccccHHHHHhHH--------hcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc-cCHHHHHHHHHHHHH
Confidence 3 223323322211 14789999999999999999999999999999999988876 799999999999999
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCCCCCCCeE
Q 013952 217 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVY 292 (433)
Q Consensus 217 ~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~vf 292 (433)
.||+++++++|.+++.++ +. ..+.+.+|+++++|.||+|+|++|+..++ ..++.. ++|+|.||+++||+.|+||
T Consensus 245 ~Gv~i~~~~~V~~i~~~~-~~-v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~Iy 322 (484)
T 3o0h_A 245 KGISIIYEATVSQVQSTE-NC-YNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVDEKMTTNVSHIW 322 (484)
T ss_dssp HTCEEESSCCEEEEEECS-SS-EEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCCTTSBCSSTTEE
T ss_pred CCCEEEeCCEEEEEEeeC-CE-EEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeECCCCCCCCCCEE
Confidence 999999999999998733 33 47888999899999999999999999853 456666 5688999999999999999
Q ss_pred EcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC------CcEE
Q 013952 293 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTV 366 (433)
Q Consensus 293 a~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~ 366 (433)
|+|||++.+ +++..|..||+++|+||++.... ...|..+|++++..++++.+ |+++ +..+
T Consensus 323 a~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~~p~~~~~~p~~a~v--Glte~~a~~~g~~~ 388 (484)
T 3o0h_A 323 AVGDVTGHI----------QLTPVAIHDAMCFVKNAFENTST--TPDYDLITTAVFSQPEIGTV--GLSEEDALHRYKRV 388 (484)
T ss_dssp ECGGGGTSC----------CCHHHHHHHHHHHHHHHHC---C--CCCCTTCCEEECCSSCEEEE--ECCHHHHHHHCSEE
T ss_pred EEEecCCCC----------cCHHHHHHHHHHHHHHHcCCCCC--cCCCCCCcEEEECCCCEEEe--eCCHHHHHHcCCCE
Confidence 999999854 56788999999999999975432 25778889888766665554 7665 2223
Q ss_pred EEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 367 LFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 367 ~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
..+..+.. ....+|.|+++ ++++|||+|++|+.++|+ +.++.+|++++|++|+..+.-+-+++++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 464 (484)
T 3o0h_A 389 EIYRTVFRPMRNVLSGSPEKMFMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSE 464 (484)
T ss_dssp EEEEEEECCHHHHHHTCCCCEEEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGG
T ss_pred EEEEecCCcchhhccCCCCcEEEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHH
Confidence 22222111 23568899887 579999999999999885 9999999999999988877666665554
No 38
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=8.9e-48 Score=377.49 Aligned_cols=394 Identities=24% Similarity=0.277 Sum_probs=280.7
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCC-----CCccccccCCCC----------CCCCC--Ccc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYER-----PALSKAYLFPEG----------TARLP--GFH 66 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~-----~~~~~~~~~~~~----------~~~~~--~~~ 66 (433)
.++||+|||||++|+++|..|++.|++ |+|||++...... +..++.++.... ...++ ...
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~---V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 81 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFK---TTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVE 81 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCC---EEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCc
Confidence 468999999999999999999999987 9999998211110 011111100000 00000 000
Q ss_pred cccC----------CCCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC--cEEecceEEEccCCCccccCCCCCC
Q 013952 67 VCVG----------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLRLTDFGVE 134 (433)
Q Consensus 67 ~~~~----------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~~ 134 (433)
.... ......+..++++.+++++.++.+. ++.....|.+.+| .+++||+||+|||+.|..|+ ++
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~---~~ 157 (470)
T 1dxl_A 82 IDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-VSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLP---GV 157 (470)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-EETTEEEECCSSSCCEEEECSEEEECCCEEECCBT---TB
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCC---CC
Confidence 0000 0000012345566799999986554 6654444555566 68999999999999998887 45
Q ss_pred CCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHH
Q 013952 135 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 214 (433)
Q Consensus 135 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l 214 (433)
|.+..++++. .++..+ +. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+
T Consensus 158 g~~~~~v~~~---~~~~~~----~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~-~~~~~~~~l~~~l 228 (470)
T 1dxl_A 158 TIDEKKIVSS---TGALAL----SE-IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT-MDAEIRKQFQRSL 228 (470)
T ss_dssp CCCSSSEECH---HHHTTC----SS-CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHH
T ss_pred CCCcccEEeH---HHhhhh----hh-cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-ccHHHHHHHHHHH
Confidence 5544455533 332221 11 4789999999999999999999999999999999998885 8999999999999
Q ss_pred HhcCcEEEcCCeEEEEEecCCCcEEEEEeC---CC--cEEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCC
Q 013952 215 ANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DG--RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFK 285 (433)
Q Consensus 215 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~g--~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~ 285 (433)
++.||+++++++|.++..++++ ..+.+. +| +++++|.||+|+|++|+++++ ..++.. ++|+|.||++||
T Consensus 229 ~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd~~~~ 306 (470)
T 1dxl_A 229 EKQGMKFKLKTKVVGVDTSGDG--VKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVNERFS 306 (470)
T ss_dssp HHSSCCEECSEEEEEEECSSSS--EEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCCTTCB
T ss_pred HHcCCEEEeCCEEEEEEEcCCe--EEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECcCCc
Confidence 9999999999999999873323 345543 44 689999999999999999873 335666 468899999999
Q ss_pred CCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC---
Q 013952 286 TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV--- 362 (433)
Q Consensus 286 t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~--- 362 (433)
|+.|+|||+|||++.+ ..+..|..||+.||.||.+.. .+..|..+|++.+..+ .+..+|.++
T Consensus 307 t~~~~Iya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~---~~~~~~~~p~~~~~~~--~~a~vG~~e~~a 371 (470)
T 1dxl_A 307 TNVSGVYAIGDVIPGP----------MLAHKAEEDGVACVEYLAGKV---GHVDYDKVPGVVYTNP--EVASVGKTEEQV 371 (470)
T ss_dssp CSSTTEEECSTTSSSC----------CCHHHHHHHHHHHHHHHTTSC---CCCCTTSCCEEECSSS--EEEEEECCHHHH
T ss_pred cCCCCEEEEeccCCCC----------ccHHHHHHHHHHHHHHHcCCC---cCCCCCCCCEEEECCC--ceEEEcCCHHHH
Confidence 9999999999999764 457789999999999999742 1245667787655444 444557654
Q ss_pred ---CcEEEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCC
Q 013952 363 ---GDTVLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLS 428 (433)
Q Consensus 363 ---~~~~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (433)
+..+..+..+.. ....+|.|+++ ++|+|+|+|++|+.++++ +.++.+|++++|++|+..+.-+-++
T Consensus 372 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt 451 (470)
T 1dxl_A 372 KETGVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPT 451 (470)
T ss_dssp HHTTCCEEEEEEEGGGCHHHHHHSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSC
T ss_pred HhcCCcEEEEEEecccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCC
Confidence 222333222111 23568999888 489999999999998885 9999999999999988776555444
Q ss_pred cc
Q 013952 429 FA 430 (433)
Q Consensus 429 ~~ 430 (433)
++
T Consensus 452 ~~ 453 (470)
T 1dxl_A 452 MS 453 (470)
T ss_dssp TT
T ss_pred hH
Confidence 43
No 39
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2e-47 Score=373.11 Aligned_cols=392 Identities=21% Similarity=0.277 Sum_probs=279.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC---CCCCCCccccccCCCC----CCCCCCcccccCCC----
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA---PYERPALSKAYLFPEG----TARLPGFHVCVGSG---- 72 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---- 72 (433)
++||+|||||+||+++|.+|++.|++ |+|||++ .. ....|..++.++.... ..+...+.......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~---V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQK---VTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 58999999999999999999999987 9999998 11 0001111111110000 00000000000000
Q ss_pred -------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC-cEEecceEEEccCCCccccCCCCCCCCCC
Q 013952 73 -------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG-LIFKYQILVIATGSTVLRLTDFGVEGADA 138 (433)
Q Consensus 73 -------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~-~~~~~d~lvlAtG~~~~~~~~~~~~g~~~ 138 (433)
....+.+++++.+++++.++.+. ++.....|.+.++ .++.||+||+|||++|..|+ +++.+.
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~---~~g~~~ 155 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-VDANTVRVVNGDSAQTYTFKNAIIATGSRPIELP---NFKFSN 155 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-EETTEEEEEETTEEEEEECSEEEECCCEEECCBT---TBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-ccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCC---CCCccc
Confidence 00012345567899999986544 6654445666666 67999999999999998887 455432
Q ss_pred CCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcC
Q 013952 139 KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKG 218 (433)
Q Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~G 218 (433)
.++ +..+...+ +. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.|
T Consensus 156 -~v~---~~~~~~~~----~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~g 225 (455)
T 1ebd_A 156 -RIL---DSTGALNL----GE-VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG-FEKQMAAIIKKRLKKKG 225 (455)
T ss_dssp -SEE---CHHHHHTC----SS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-SCHHHHHHHHHHHHHTT
T ss_pred -eEe---cHHHHhcc----cc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc-cCHHHHHHHHHHHHHCC
Confidence 243 33333222 11 4789999999999999999999999999999999988885 79999999999999999
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeC---CCcEEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCCCCCCCe
Q 013952 219 IKIIKGTVAVGFTTNADGEVKEVKLK---DGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDV 291 (433)
Q Consensus 219 V~v~~~~~v~~i~~~~~g~~~~v~~~---~g~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~v 291 (433)
|+++++++|.++..++++ ..+.+. +++++++|.||+|+|++|+++++ ..++.. ++|+|.||++|||+.|+|
T Consensus 226 v~i~~~~~v~~i~~~~~~--~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~I 303 (455)
T 1ebd_A 226 VEVVTNALAKGAEEREDG--VTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNI 303 (455)
T ss_dssp CEEEESEEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred CEEEeCCEEEEEEEeCCe--EEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeCCCcccCCCCE
Confidence 999999999999863222 345543 45679999999999999999863 335666 468899999999999999
Q ss_pred EEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC------CcE
Q 013952 292 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDT 365 (433)
Q Consensus 292 fa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~ 365 (433)
||+|||+..+ ..+..|..||+.+|.||.+.. .+..|..+|++.+..+++ ..+|.++ +..
T Consensus 304 ya~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~~~~~--a~vG~~e~~a~~~g~~ 368 (455)
T 1ebd_A 304 FAIGDIVPGP----------ALAHKASYEGKVAAEAIAGHP---SAVDYVAIPAVVFSDPEC--ASVGYFEQQAKDEGID 368 (455)
T ss_dssp EECGGGSSSC----------CCHHHHHHHHHHHHHHHTSCC---CCCCCSCCCEEECSSSCE--EEEECCHHHHHTTTCC
T ss_pred EEEeccCCCc----------ccHHHHHHHHHHHHHHHcCCC---ccCCCCCCCEEEECCCce--EEEeCCHHHHHhcCCC
Confidence 9999999764 457789999999999999742 224566778766554544 4557654 222
Q ss_pred EEEcCCCcc--------ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCCcc
Q 013952 366 VLFGDNDLA--------SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFA 430 (433)
Q Consensus 366 ~~~~~~~~~--------~~~~~~~~~~~~--~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (433)
+..+..+.. ....+|.|++++ +|+|+|+|++|+.++|+ +.++.+|++++|++|+..+.-+-++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~ 444 (455)
T 1ebd_A 369 VIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLG 444 (455)
T ss_dssp EEEEEEEGGGCHHHHHHTCCCCEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSST
T ss_pred EEEEEEEcCcchHHhhcCCCcEEEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHH
Confidence 333222110 235689998884 89999999999998885 999999999999998877655555544
No 40
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.9e-47 Score=372.35 Aligned_cols=389 Identities=22% Similarity=0.292 Sum_probs=279.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCC-C---CCCCCCccccccCCCC---------CCCCC---Ccccc
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEV-A---PYERPALSKAYLFPEG---------TARLP---GFHVC 68 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~-~---~~~~~~~~~~~~~~~~---------~~~~~---~~~~~ 68 (433)
++||+|||||+||++||..|++.|++ |+|||++. . .+..|..++.++.... ...++ .....
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLK---VLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 58999999999999999999999987 99999982 0 0111111111110000 00000 00000
Q ss_pred --cC------CCCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCC
Q 013952 69 --VG------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKN 140 (433)
Q Consensus 69 --~~------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~ 140 (433)
.. .........++++.+++++.++.+. ++ .+++.+. +++++||+||+|||++|+.|+ ++++ + ..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~-g~~~~~d~lViATGs~p~~p~--gi~~-~-~~ 154 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-VG--PKEVEVG-GERYGAKSLILATGSEPLELK--GFPF-G-ED 154 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-EE--TTEEEET-TEEEEEEEEEECCCEEECCBT--TBCC-S-SS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-cc--CCEEEEc-cEEEEeCEEEEcCCCCCCCCC--CCCC-C-Cc
Confidence 00 0000002334567899999986543 54 4677776 678999999999999998775 2555 2 24
Q ss_pred EEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcE
Q 013952 141 IFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIK 220 (433)
Q Consensus 141 v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~ 220 (433)
++ +..++..+ +...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.||+
T Consensus 155 v~---~~~~~~~l----~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~gV~ 226 (464)
T 2eq6_A 155 VW---DSTRALKV----EEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-GDPETAALLRRALEKEGIR 226 (464)
T ss_dssp EE---CHHHHTCG----GGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHTTCE
T ss_pred EE---cHHHHHhh----hhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHhcCCE
Confidence 54 33333322 2224789999999999999999999999999999999998885 7999999999999999999
Q ss_pred EEcCCeEEEEEecCCCcEEEEEeC-C--Cc--EEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCCCCCCCe
Q 013952 221 IIKGTVAVGFTTNADGEVKEVKLK-D--GR--TLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDV 291 (433)
Q Consensus 221 v~~~~~v~~i~~~~~g~~~~v~~~-~--g~--~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~v 291 (433)
++++++|.+++.+ ++ ...+.+. + |+ ++++|.|++|+|++|+++++ ..++.. ++|+|.||+++||+.|+|
T Consensus 227 i~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd~~~~t~~~~I 304 (464)
T 2eq6_A 227 VRTKTKAVGYEKK-KD-GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVNARMETSVPGV 304 (464)
T ss_dssp EECSEEEEEEEEE-TT-EEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCCTTCBCSSTTE
T ss_pred EEcCCEEEEEEEe-CC-EEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEECCCcccCCCCE
Confidence 9999999999873 22 2456665 5 76 89999999999999999853 345666 578899999999999999
Q ss_pred EEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC------CcE
Q 013952 292 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDT 365 (433)
Q Consensus 292 fa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~ 365 (433)
||+|||++.+ ..+..|..||+.+|.||.+.. ...+|. +|++....++ +..+|.++ +..
T Consensus 305 ya~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~---~~~~~~-~p~~~~~~~~--~a~vG~~e~~a~~~g~~ 368 (464)
T 2eq6_A 305 YAIGDAARPP----------LLAHKAMREGLIAAENAAGKD---SAFDYQ-VPSVVYTSPE--WAGVGLTEEEAKRAGYK 368 (464)
T ss_dssp EECGGGTCSS----------CCHHHHHHHHHHHHHHHTTCC---CCCCCC-CCEEECSSSE--EEEEECCHHHHHHTTCC
T ss_pred EEEeccCCCc----------ccHHHHHHHHHHHHHHhcCCC---cccCCC-CCeEEECCCC--EEEEeCCHHHHHhcCCC
Confidence 9999999764 457789999999999999743 124566 7876554444 44557664 222
Q ss_pred EEEcCCCcc--------ccCCcEEEEEEe--CCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCCcc
Q 013952 366 VLFGDNDLA--------SATHKFGTYWIK--DGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFA 430 (433)
Q Consensus 366 ~~~~~~~~~--------~~~~~~~~~~~~--~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (433)
+..+..+.. ....+|.|++++ +|+|+|+|++|+.++|+ +.++.+|++++|++|+..+.-+-++++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~g~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~ 444 (464)
T 2eq6_A 369 VKVGKFPLAASGRALTLGGAEGMVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLS 444 (464)
T ss_dssp EEEEEEEGGGCHHHHHTSCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTT
T ss_pred EEEEEEEcCcchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChH
Confidence 333222110 235688998884 79999999999999885 999999999999998876555555444
No 41
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=2.3e-48 Score=382.29 Aligned_cols=392 Identities=20% Similarity=0.267 Sum_probs=281.4
Q ss_pred CcCeEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEc---------CCCCCCC-----CCCccccccCCCCC----CCCCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIIS---------KEVAPYE-----RPALSKAYLFPEGT----ARLPG 64 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~~~~V~lie---------~~~~~~~-----~~~~~~~~~~~~~~----~~~~~ 64 (433)
.+|||+|||||++|++||.+|++ .|++ |+||| +.. ... .|..++.++..... .....
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~---V~liE~~~~~~~~~~~~-~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~ 77 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKR---VAVIDLQKHHGPPHYAA-LGGTCVNVGCVPKKLMVTGANYMDTIRESAG 77 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCC---EEEEESCSSSBTTTBSC-TTCHHHHHSHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCE---EEEEecccccccccCCC-cCccccCCCcchhhHHHHHHHHHHHHHHHHh
Confidence 36899999999999999999999 9987 99999 321 000 01111111100000 00000
Q ss_pred cccccCC-----C--------------CCCCCHhHHHhC-CcEEEeCceEEEEECCCCEEEeC-----CC---cEEecce
Q 013952 65 FHVCVGS-----G--------------GERLLPEWYKEK-GIELILSTEIVRADIASKTLLSA-----TG---LIFKYQI 116 (433)
Q Consensus 65 ~~~~~~~-----~--------------~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~v~~~-----~~---~~~~~d~ 116 (433)
+...... + ........+++. +++++.+ .+..++. +++.+. ++ +++.||+
T Consensus 78 ~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g-~~~~i~~--~~v~v~~~~~~~g~~~~~~~~d~ 154 (490)
T 1fec_A 78 FGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQG-FGALQDN--HTVLVRESADPNSAVLETLDTEY 154 (490)
T ss_dssp GTEECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEES-EEEEEET--TEEEEESSSSTTSCEEEEEEEEE
T ss_pred cCcccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEe-EEEEeeC--CEEEEEeeccCCCCceEEEEcCE
Confidence 0000000 0 000112234567 9999998 4666764 456553 56 6899999
Q ss_pred EEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhC---CCeEEEEcc
Q 013952 117 LVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN---NIDVSMVYP 193 (433)
Q Consensus 117 lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~---g~~V~li~~ 193 (433)
||||||++|..|+ ++|.+ .++ +..++..+ . ..+++++|||+|++|+|+|..|.+. |.+|+++++
T Consensus 155 lviAtGs~p~~p~---i~g~~--~~~---~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~ 221 (490)
T 1fec_A 155 ILLATGSWPQHLG---IEGDD--LCI---TSNEAFYL----D-EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYR 221 (490)
T ss_dssp EEECCCEEECCCC---SBTGG--GCB---CHHHHTTC----S-SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred EEEeCCCCCCCCC---CCCcc--cee---cHHHHhhh----h-hcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEc
Confidence 9999999998877 45542 222 33333221 1 1478999999999999999999999 999999999
Q ss_pred CCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh--h-hcc
Q 013952 194 EPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL--F-KGQ 270 (433)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~--~-~~~ 270 (433)
.+.+++. +++++.+.+.+.+++.||+++++++|.++..++++ ...+.+.+|+++++|.||+|+|++|+++. + ..+
T Consensus 222 ~~~~l~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~g 299 (490)
T 1fec_A 222 GDMILRG-FDSELRKQLTEQLRANGINVRTHENPAKVTKNADG-TRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAG 299 (490)
T ss_dssp SSSSSTT-SCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTS-CEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGT
T ss_pred CCCcccc-cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC-EEEEEECCCcEEEcCEEEEccCCCcCccccCchhcC
Confidence 9998886 89999999999999999999999999999873323 35788888889999999999999999973 3 345
Q ss_pred ccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEe
Q 013952 271 VAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSR 349 (433)
Q Consensus 271 ~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~ 349 (433)
+.. ++|+|.||++|||+.|+|||+|||++.+ .++..|..||+++|.||.+... ....|..+|++.+.
T Consensus 300 l~~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~~----------~l~~~A~~~g~~aa~~i~g~~~--~~~~~~~~p~~~~~ 367 (490)
T 1fec_A 300 VEVAKNGAIKVDAYSKTNVDNIYAIGDVTDRV----------MLTPVAINEGAAFVDTVFANKP--RATDHTKVACAVFS 367 (490)
T ss_dssp CCBCTTSCBCCCTTCBCSSTTEEECGGGGCSC----------CCHHHHHHHHHHHHHHHHSSCC--CCCCCSSCCEEECC
T ss_pred ccCCCCCCEEECCCCccCCCCEEEEeccCCCc----------cCHHHHHHHHHHHHHHhcCCCC--CcCCCCCccEEEEC
Confidence 666 4788999999999999999999999643 5788899999999999997532 23567778877665
Q ss_pred ecccceEEecCCCC------cEEEEcCCCc--------cccCCcEE-EEEEe--CCEEEEEEEecCChHHH-HHHHHHHH
Q 013952 350 AFDLSWQFYGDNVG------DTVLFGDNDL--------ASATHKFG-TYWIK--DGKVVGVFLESGTPEEN-KAIAKVAR 411 (433)
Q Consensus 350 ~~~~~~~~~g~~~~------~~~~~~~~~~--------~~~~~~~~-~~~~~--~~~l~G~~~~g~~~~~~-~~~~~~~~ 411 (433)
.++++ .+|+++. ..+.....+. .....+|. |++++ +|+|+|+|++|+.++++ +.++.+|+
T Consensus 368 ~~~~a--~vG~~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~ 445 (490)
T 1fec_A 368 IPPMG--VCGYVEEDAAKKYDQVAVYESSFTPLMHNISGSTYKKFMVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLK 445 (490)
T ss_dssp SSCEE--EEECCHHHHHHHCSEEEEEEEEECCHHHHHHSCTTCCEEEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHH
T ss_pred CCCeE--EEeCCHHHHHhcCCCEEEEEeecChhhhhhhcCCCeEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHH
Confidence 55544 4576642 1222211111 01356889 98884 89999999999999885 99999999
Q ss_pred cCCCCCChhhhcccCCCccc
Q 013952 412 VQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~ 431 (433)
+++|++||..+.-+-+++++
T Consensus 446 ~~~t~~~l~~~~~~hPt~~e 465 (490)
T 1fec_A 446 MGAKISDFYNTIGVHPTSAE 465 (490)
T ss_dssp TTCBHHHHHTSCCCSSCSGG
T ss_pred cCCCHHHHhccccCCCCHHH
Confidence 99999988876555555543
No 42
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=5.1e-47 Score=370.29 Aligned_cols=393 Identities=20% Similarity=0.251 Sum_probs=282.7
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC---CCCCCCccccccCCCC----CCCCCCcccccCC---
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA---PYERPALSKAYLFPEG----TARLPGFHVCVGS--- 71 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--- 71 (433)
++++||+|||||++|+++|.+|++.|++ |+|||++ .. .+..|..++.++.... ..+.+.+......
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~ 78 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKR---VALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTL 78 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---C
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCc---EEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCc
Confidence 3579999999999999999999999887 9999998 10 0000111111110000 0000000000000
Q ss_pred C--------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCC
Q 013952 72 G--------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD 137 (433)
Q Consensus 72 ~--------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~ 137 (433)
+ ....+...+.+.+++++.+ .+..++ .++|.+ +++++.||+||+|||+.|..|+ +||.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i~--~~~v~~-~g~~~~~d~lviAtGs~p~~p~---i~G~~ 151 (463)
T 2r9z_A 79 DWPRLVAGRDRYIGAINSFWDGYVERLGITRVDG-HARFVD--AHTIEV-EGQRLSADHIVIATGGRPIVPR---LPGAE 151 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--TTEEEE-TTEEEEEEEEEECCCEEECCCS---CTTGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEe-EEEEcc--CCEEEE-CCEEEEcCEEEECCCCCCCCCC---CCCcc
Confidence 0 0001123346689999998 455565 356777 6778999999999999998877 46542
Q ss_pred CCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhc
Q 013952 138 AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANK 217 (433)
Q Consensus 138 ~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~ 217 (433)
.+ .+..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.
T Consensus 152 --~~---~~~~~~~~~----~-~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~~ 220 (463)
T 2r9z_A 152 --LG---ITSDGFFAL----Q-QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ-FDPLLSATLAENMHAQ 220 (463)
T ss_dssp --GS---BCHHHHHHC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHHT
T ss_pred --ce---ecHHHHhhh----h-ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc-cCHHHHHHHHHHHHHC
Confidence 12 233333222 1 14789999999999999999999999999999999988876 7999999999999999
Q ss_pred CcEEEcCCeEEEEEecCCCcEEEEEeCCCc-EEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCCCCCCCeE
Q 013952 218 GIKIIKGTVAVGFTTNADGEVKEVKLKDGR-TLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVY 292 (433)
Q Consensus 218 GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~-~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~vf 292 (433)
||+++++++|.++..++++ ..+.+.+|+ ++++|.|++|+|++|+++.+ ..++.. ++|+|.||+++||+.|+||
T Consensus 221 gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd~~~~t~~~~Iy 298 (463)
T 2r9z_A 221 GIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTDAYQNTNVPGVY 298 (463)
T ss_dssp TCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCCTTSBCSSTTEE
T ss_pred CCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeECCCCccCCCCEE
Confidence 9999999999999873333 578888998 89999999999999999732 345666 4788999999999999999
Q ss_pred EcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC-------CcE
Q 013952 293 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV-------GDT 365 (433)
Q Consensus 293 a~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~-------~~~ 365 (433)
|+|||++.+ .++..|..||+.+|.||.+.... ....|..+|++++..++++.+ |+++ +..
T Consensus 299 a~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~~~-~~~~~~~~p~~~~~~~~~a~v--Gl~e~~a~~~~g~~ 365 (463)
T 2r9z_A 299 ALGDITGRD----------QLTPVAIAAGRRLAERLFDGQSE-RKLDYDNIPTVVFAHPPLSKV--GLSEPEARERLGDV 365 (463)
T ss_dssp ECGGGGTSC----------CCHHHHHHHHHHHHHHHHSCCTT-CCCCCSSCCEEECCSSCEEEE--ECCHHHHHHHHCSC
T ss_pred EEeecCCCc----------ccHHHHHHHHHHHHHHHcCCCCc-ccCCCCCCCEEEeCCCCeEEE--cCCHHHHHhcCCCC
Confidence 999998754 56788999999999999975321 114677888877766665554 6543 121
Q ss_pred EEEcCC-----Cc---cccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 366 VLFGDN-----DL---ASATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 366 ~~~~~~-----~~---~~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
+..... .. .....+|.|+++ ++++|+|+|++|+.++++ +.++.+|+.++|++||..+.-+-+++++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e 442 (463)
T 2r9z_A 366 LTVYETSFTPMRYALNEHGPKTAMKLVCAGPEQRVVGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAE 442 (463)
T ss_dssp EEEEEEEECCGGGTTSSSCCCEEEEEEEETTTTEEEEEEEESTTGGGTSHHHHHHHHTTCBHHHHHTSCCCSSSSGG
T ss_pred EEEEEEEcccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHH
Confidence 221110 00 123567888888 489999999999998885 9999999999999988877655555543
No 43
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=4.9e-48 Score=380.13 Aligned_cols=396 Identities=19% Similarity=0.198 Sum_probs=278.0
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC-CC-CCCccccccCCCCC---------------CCCCCc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP-YE-RPALSKAYLFPEGT---------------ARLPGF 65 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~-~~-~~~~~~~~~~~~~~---------------~~~~~~ 65 (433)
.+|||+|||||+||++||.+|++.|++ |+|||+. ..+ .. +..+.+.++...+. .....+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~ 84 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGAR---VACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAY 84 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCE---EEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhc
Confidence 368999999999999999999999987 9999953 111 00 00011111100000 000000
Q ss_pred ccccCCCCC------------------CCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCc-EEecceEEEccCCCcc
Q 013952 66 HVCVGSGGE------------------RLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL-IFKYQILVIATGSTVL 126 (433)
Q Consensus 66 ~~~~~~~~~------------------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~ 126 (433)
......... ......++..+++++.+ ....+++....+...++. ++.||+||||||+.|+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~ 163 (483)
T 3dgh_A 85 GWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYING-LGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPR 163 (483)
T ss_dssp TBCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEECCCEEEC
T ss_pred CcccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcC
Confidence 000000000 00112345678999887 455566555556666664 7999999999999998
Q ss_pred ccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHH
Q 013952 127 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 206 (433)
Q Consensus 127 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~ 206 (433)
.|+ +||.+.. .+ +..+...+ ...+++++|||+|++|+|+|..|.+.|.+|+++.+. .+++. +++++
T Consensus 164 ~p~---i~G~~~~-~~---~~~~~~~~-----~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~d~~~ 229 (483)
T 3dgh_A 164 YPD---IPGAVEY-GI---TSDDLFSL-----DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVLRG-FDQQM 229 (483)
T ss_dssp CCS---STTHHHH-CB---CHHHHTTC-----SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSSTT-SCHHH
T ss_pred CCC---CCCcccc-cC---cHHHHhhh-----hhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCCcc-cCHHH
Confidence 887 5664311 11 22222211 114789999999999999999999999999999884 55654 79999
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc-----EEECCEEEEcccCccChhhh---hcccccCCCcE
Q 013952 207 AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR-----TLEADIVVVGVGGRPLISLF---KGQVAENKGGI 278 (433)
Q Consensus 207 ~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~-----~i~~d~vi~a~G~~p~~~~~---~~~~~~~~g~i 278 (433)
.+.+.+.+++.||++++++.+.++...+++. ..+.+.++. ++++|.|++|+|++|+++++ ..++..++|+|
T Consensus 230 ~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~G~i 308 (483)
T 3dgh_A 230 AELVAASMEERGIPFLRKTVPLSVEKQDDGK-LLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQKDKI 308 (483)
T ss_dssp HHHHHHHHHHTTCCEEETEEEEEEEECTTSC-EEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBTTBB
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCc-EEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccCCEE
Confidence 9999999999999999999999998744443 346665543 79999999999999999876 34566655999
Q ss_pred EeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEe
Q 013952 279 ETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFY 358 (433)
Q Consensus 279 ~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 358 (433)
.||+++||+.|+|||+|||+.... ..+..|..||+++|+||++.... ...|..+|++++..|+++.+
T Consensus 309 ~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~a~v-- 375 (483)
T 3dgh_A 309 PVDSQEATNVANIYAVGDIIYGKP---------ELTPVAVLAGRLLARRLYGGSTQ--RMDYKDVATTVFTPLEYACV-- 375 (483)
T ss_dssp CCCTTCBCSSTTEEECSTTBTTSC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCTTCCEEECSSSEEEEE--
T ss_pred EECcCCccCCCCEEEEEcccCCCC---------ccHHHHHHHHHHHHHHHcCCCCC--cCCCCCCCEEEECCCccEEE--
Confidence 999999999999999999984321 56788999999999999975422 35788899888876766555
Q ss_pred cCCCC--------cEEEE--cCCCcc-------ccCCcEEEEEE--e-CCEEEEEEEecCChHHH-HHHHHHHHcCCCCC
Q 013952 359 GDNVG--------DTVLF--GDNDLA-------SATHKFGTYWI--K-DGKVVGVFLESGTPEEN-KAIAKVARVQPSVE 417 (433)
Q Consensus 359 g~~~~--------~~~~~--~~~~~~-------~~~~~~~~~~~--~-~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~ 417 (433)
|+++. +.+.. ....+. ....+|.|+++ + +++|||+|++|++++|+ +.++.||++++|++
T Consensus 376 Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~ 455 (483)
T 3dgh_A 376 GLSEEDAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTIN 455 (483)
T ss_dssp ECCHHHHHHHHCGGGEEEEEEECCCGGGTTTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHH
T ss_pred eCCHHHHHhhCCCCCEEEEEEeecchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHH
Confidence 66642 11111 111110 13568999887 3 69999999999999885 99999999999999
Q ss_pred ChhhhcccCCCccc
Q 013952 418 SLDVLKNEGLSFAS 431 (433)
Q Consensus 418 ~~~~~~~~~~~~~~ 431 (433)
||..+.-+-+++++
T Consensus 456 ~l~~~~~~hPt~~e 469 (483)
T 3dgh_A 456 TLINTVGIHPTTAE 469 (483)
T ss_dssp HHHTSCCCSSCSGG
T ss_pred HHhhcccCCCChHH
Confidence 77776555555544
No 44
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=1.7e-48 Score=383.29 Aligned_cols=396 Identities=16% Similarity=0.092 Sum_probs=277.7
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCC-C---CCCCCCccccccCCC----CCCCCCCcccccCC-
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEV-A---PYERPALSKAYLFPE----GTARLPGFHVCVGS- 71 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~-~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~- 71 (433)
|+..+|||+|||||+||++||.+|++.|++ |+|||++. . .+..|..++.++... .....+.+......
T Consensus 4 M~~~~~DvvVIGgG~aGl~aA~~la~~G~~---V~liE~~~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~ 80 (492)
T 3ic9_A 4 MKVINVDVAIIGTGTAGMGAYRAAKKHTDK---VVLIEGGAYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRI 80 (492)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHTTCSC---EEEEESSCSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEE
T ss_pred CccCCCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCC
Confidence 443358999999999999999999999987 99999981 1 011111122111100 00111111000000
Q ss_pred -CCC----CCC-----------HhHHHh-CCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCC
Q 013952 72 -GGE----RLL-----------PEWYKE-KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVE 134 (433)
Q Consensus 72 -~~~----~~~-----------~~~~~~-~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~ 134 (433)
... ... ...+.. .+++++.+.... . +.++|.+.+++++.||+||||||++|..|+. +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~-~--~~~~v~~~~~~~~~~d~lViATGs~p~~p~~---~ 154 (492)
T 3ic9_A 81 SVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKF-L--DEHTLQVDDHSQVIAKRIVIATGSRPNYPEF---L 154 (492)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEE-E--ETTEEEETTTEEEEEEEEEECCCEECCCCHH---H
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEE-e--cCCEEEEcCCcEEEeCEEEEccCCCCcCCCC---C
Confidence 000 000 011111 245566653322 2 3567888888899999999999999988763 3
Q ss_pred CCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHH
Q 013952 135 GADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYY 214 (433)
Q Consensus 135 g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l 214 (433)
+.....+++..+.. .+ ...+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.+.+.+.+
T Consensus 155 ~~~~~~v~t~~~~~---~~-----~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~~~l~~~l 225 (492)
T 3ic9_A 155 AAAGSRLLTNDNLF---EL-----NDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL-QDEEMKRYAEKTF 225 (492)
T ss_dssp HTTGGGEECHHHHT---TC-----SSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC-CCHHHHHHHHHHH
T ss_pred CccCCcEEcHHHHh---hh-----hhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc-CCHHHHHHHHHHH
Confidence 33334555433222 11 114799999999999999999999999999999999998875 7999999999999
Q ss_pred HhcCcEEEcCCeEEEEEecCCCcEEEEEeC--CC--cEEECCEEEEcccCccChhhh---hccccc-CCCcEEeC-CCCC
Q 013952 215 ANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DG--RTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETD-DFFK 285 (433)
Q Consensus 215 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~--~g--~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd-~~~~ 285 (433)
++. |++++++++.+++.++++ ..+.+. +| +++++|.|++|+|++|+++++ ..++.. ++|+|.|| +++|
T Consensus 226 ~~~-V~i~~~~~v~~i~~~~~~--v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~ 302 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEKEDA--VEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQ 302 (492)
T ss_dssp HTT-SEEETTCEEEEEEECSSS--EEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCB
T ss_pred hhC-cEEEECCEEEEEEEcCCE--EEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECccccc
Confidence 988 999999999999873333 345553 67 689999999999999999863 346666 57889999 8999
Q ss_pred CCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCCCc-
Q 013952 286 TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNVGD- 364 (433)
Q Consensus 286 t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~~~- 364 (433)
|+.|+|||+|||++.+ +.+..|..||+.||.||.+.... ....+..+|++.+..++++.+ |+++.+
T Consensus 303 t~~~~IyA~GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~~~-~~~~~~~~p~~~~~~p~~a~v--Glte~~a 369 (492)
T 3ic9_A 303 TSVDHIFVAGDANNTL----------TLLHEAADDGKVAGTNAGAYPVI-AQGQRRAPLSVVFTEPQVASV--GLSLRQI 369 (492)
T ss_dssp CSSTTEEECGGGGTSS----------CSHHHHHHHHHHHHHHHHHTTSC-CEECCCCCEEEECSSSEEEEE--ESCHHHH
T ss_pred CCCCCEEEEEecCCCC----------ccHHHHHHHHHHHHHHHcCCCCC-cccCCCCCcEEEECCCCeEEe--cCCHHHH
Confidence 9999999999999865 56778999999999999974221 235666777766655555544 666421
Q ss_pred ----------EEEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhc
Q 013952 365 ----------TVLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLK 423 (433)
Q Consensus 365 ----------~~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 423 (433)
.+..+..+.. ..+.+|.|+++ ++|+|||+|++|++++|+ +.++.||++++|++||..+.
T Consensus 370 ~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~g~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~ 449 (492)
T 3ic9_A 370 EDLYADQDAANYVVGQVSFEGQGRSRVMGKNKGLLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMP 449 (492)
T ss_dssp HHHCSCSSSCCEEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSC
T ss_pred HhccCccCCccEEEEEEEeccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCC
Confidence 2222222111 24568999887 579999999999999886 99999999999999777665
Q ss_pred ccCCCcc
Q 013952 424 NEGLSFA 430 (433)
Q Consensus 424 ~~~~~~~ 430 (433)
-+-++++
T Consensus 450 ~~hPt~~ 456 (492)
T 3ic9_A 450 FYHPVIE 456 (492)
T ss_dssp CCTTCTH
T ss_pred CCCCChH
Confidence 5444443
No 45
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=5e-47 Score=373.90 Aligned_cols=401 Identities=19% Similarity=0.214 Sum_probs=273.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCC----CCCCCCccccccCCC---------CCCCC---CCcccc
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVA----PYERPALSKAYLFPE---------GTARL---PGFHVC 68 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~----~~~~~~~~~~~~~~~---------~~~~~---~~~~~~ 68 (433)
++||+|||||+||++||.+|++.|++ |+|||++.. .+..|..++.++... ....+ +.+.+.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~---V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAK---VALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 38999999999999999999999887 999999820 011111111110000 00000 000000
Q ss_pred --cC------CCCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCC-------------CcEEecceEEEccCCCccc
Q 013952 69 --VG------SGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSAT-------------GLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 69 --~~------~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~-------------~~~~~~d~lvlAtG~~~~~ 127 (433)
.. ......+...+++.+++++.++. ..++. +++.+.+ +.++.||+||+|||+.|..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~-~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~ 155 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTA-SFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVF 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCC-CCC----------------------------CBSSEEECCCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCC
Confidence 00 00000122344678999998843 33443 4455433 5679999999999999988
Q ss_pred cCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHH
Q 013952 128 LTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIA 207 (433)
Q Consensus 128 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~ 207 (433)
|+ ++|.+ .+++. .++..+ + .+++++|||+|++|+|+|..|.+.|.+|+++++.+++++. +++++.
T Consensus 156 p~---i~G~~--~~~~~---~~~~~~----~--~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-~d~~~~ 220 (500)
T 1onf_A 156 PP---VKGIE--NTISS---DEFFNI----K--ESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK-FDESVI 220 (500)
T ss_dssp CS---CTTGG--GCEEH---HHHTTC----C--CCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT-SCHHHH
T ss_pred CC---CCCCC--cccCH---HHHhcc----C--CCCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc-cchhhH
Confidence 77 56642 23332 222211 1 2789999999999999999999999999999999998875 899999
Q ss_pred HHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE-EECCEEEEcccCccChh-h-h-hcccccCCCcEEeCCC
Q 013952 208 AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRT-LEADIVVVGVGGRPLIS-L-F-KGQVAENKGGIETDDF 283 (433)
Q Consensus 208 ~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~-i~~d~vi~a~G~~p~~~-~-~-~~~~~~~~g~i~vd~~ 283 (433)
+.+.+.+++.||+++++++|.+++.++++. ..+.+.+|++ +++|.|++|+|++|+++ + + ..++..++|+|.||++
T Consensus 221 ~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~G~i~vd~~ 299 (500)
T 1onf_A 221 NVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVETNNNYIVVDEN 299 (500)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCBSSSCEEECTT
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccccCCEEEECCC
Confidence 999999999999999999999998733333 4678888887 99999999999999996 3 2 3456567788999999
Q ss_pred CCCCCCCeEEcCccccccccc-----------------------cC-cccccccHHHHHHHHHHHHHHHhccCCCCCccC
Q 013952 284 FKTSADDVYAVGDVATFPMKL-----------------------YR-EMRRVEHVDHARKSAEQAVKTIMATEGGKTVTG 339 (433)
Q Consensus 284 ~~t~~~~vfa~Gd~~~~~~~~-----------------------~~-~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~ 339 (433)
+||+.|+|||+|||+..+... .+ ......++..|.+||+++|+||.+... ....
T Consensus 300 ~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~~~--~~~~ 377 (500)
T 1onf_A 300 QRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLKKT--RKTN 377 (500)
T ss_dssp CBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHSCTT--CCCC
T ss_pred cccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCCCC--ccCC
Confidence 999999999999999532110 00 001336889999999999999997432 2356
Q ss_pred CCCCCeEEEeecccceEEecCCCC--------cEEEEc-----CCC-------ccccCCcEEEEEE--eCCEEEEEEEec
Q 013952 340 YDYLPYFYSRAFDLSWQFYGDNVG--------DTVLFG-----DND-------LASATHKFGTYWI--KDGKVVGVFLES 397 (433)
Q Consensus 340 ~~~~p~~~~~~~~~~~~~~g~~~~--------~~~~~~-----~~~-------~~~~~~~~~~~~~--~~~~l~G~~~~g 397 (433)
|..+|++.+..++++.+ |+++. ..+... ... ......+|.|+++ ++++|+|+|++|
T Consensus 378 ~~~~p~~~~~~~~~a~v--Gl~e~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~ilG~~~~g 455 (500)
T 1onf_A 378 YKLIPTVIFSHPPIGTI--GLSEEAAIQIYGKENVKIYESKFTNLFFSVYDIEPELKEKTYLKLVCVGKDELIKGLHIIG 455 (500)
T ss_dssp CSSCCEEECCSSCEEEE--ECCHHHHHHHTCGGGEEEEEEEECCGGGTTSCSCGGGSCCEEEEEEEETTTTEEEEEEEES
T ss_pred CCCCCeEEEcCcceEEE--eCCHHHHHhcCCCccEEEEEEECchhhhhhccccccCCCceEEEEEEECCCCEEEEEEEEC
Confidence 77788877655555444 66531 112211 111 1123567889888 579999999999
Q ss_pred CChHHH-HHHHHHHHcCCCCCChhhhcccCCCccc
Q 013952 398 GTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 398 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
+.++++ +.++.+|+.++|++||..+.-+-+++++
T Consensus 456 ~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e 490 (500)
T 1onf_A 456 LNADEIVQGFAVALKMNATKKDFDETIPIHPTAAE 490 (500)
T ss_dssp TTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTT
T ss_pred CCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHH
Confidence 998885 9999999999999988877555555443
No 46
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.5e-47 Score=378.79 Aligned_cols=397 Identities=18% Similarity=0.167 Sum_probs=276.6
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCC-CccccccCC-----------CCC----CCCCCcc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERP-ALSKAYLFP-----------EGT----ARLPGFH 66 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~-~~~~~~~~~-----------~~~----~~~~~~~ 66 (433)
.+|||+|||||+||++||..|++.|++ |+|||+. ...+... .+.+.+... ... .....+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g 107 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKK---VMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYG 107 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999987 9999985 2211110 111111100 000 0000000
Q ss_pred cccCCC------------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCc--EEecceEEEccCCCcc
Q 013952 67 VCVGSG------------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGL--IFKYQILVIATGSTVL 126 (433)
Q Consensus 67 ~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~--~~~~d~lvlAtG~~~~ 126 (433)
...... ........++..+++++.+ .+..+++....|...+++ ++.||+||||||++|+
T Consensus 108 ~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g-~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~ 186 (519)
T 3qfa_A 108 WKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENA-YGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPR 186 (519)
T ss_dssp BCCCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEEC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcC
Confidence 000000 0001112345679999987 566677665566666664 7999999999999998
Q ss_pred ccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHH
Q 013952 127 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADI 206 (433)
Q Consensus 127 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~ 206 (433)
.|+ +||... .++ +..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++. .+++. +++++
T Consensus 187 ~p~---i~G~~~-~~~---t~~~~~~l----~-~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l~~-~d~~~ 252 (519)
T 3qfa_A 187 YLG---IPGDKE-YCI---SSDDLFSL----P-YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILLRG-FDQDM 252 (519)
T ss_dssp CCC---CTTHHH-HCB---CHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-SCHHH
T ss_pred CCC---CCCccC-ceE---cHHHHhhh----h-hcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccccc-CCHHH
Confidence 876 566321 122 22222211 1 24789999999999999999999999999999884 56665 79999
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEecCC---Cc-EEEEEeCCC-c--EEECCEEEEcccCccChhhh---hcccccC--
Q 013952 207 AAFYEGYYANKGIKIIKGTVAVGFTTNAD---GE-VKEVKLKDG-R--TLEADIVVVGVGGRPLISLF---KGQVAEN-- 274 (433)
Q Consensus 207 ~~~l~~~l~~~GV~v~~~~~v~~i~~~~~---g~-~~~v~~~~g-~--~i~~d~vi~a~G~~p~~~~~---~~~~~~~-- 274 (433)
.+.+.+.+++.||++++++.+.++...++ +. ...+...+| + ++++|.|++|+|++|+++++ ..++..+
T Consensus 253 ~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~ 332 (519)
T 3qfa_A 253 ANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEK 332 (519)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTT
T ss_pred HHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCC
Confidence 99999999999999999998888865332 22 223334455 2 57899999999999999853 3456663
Q ss_pred CCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccc
Q 013952 275 KGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLS 354 (433)
Q Consensus 275 ~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~ 354 (433)
+|+|.||+++||+.|+|||+|||+.... .++..|..||+++|+||++.... ...|..+|++.+..++++
T Consensus 333 ~G~I~Vd~~~~Ts~~~IyA~GD~~~g~~---------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~a 401 (519)
T 3qfa_A 333 TGKIPVTDEEQTNVPYIYAIGDILEDKV---------ELTPVAIQAGRLLAQRLYAGSTV--KCDYENVPTTVFTPLEYG 401 (519)
T ss_dssp TCCBCCCTTSBCSSTTEEECGGGBSSSC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCTTCCEEECSSSCEE
T ss_pred CCeEeeCCCCccCCCCEEEEEeccCCCC---------ccHHHHHHHHHHHHHHHcCCCCc--cCCCCcCcEEEECCCceE
Confidence 6889999999999999999999984221 56788999999999999975432 357778888877666665
Q ss_pred eEEecCCCCc--------EEEEcC--CCc-------cccCCcEEEEEEe---CCEEEEEEEecCChHHH-HHHHHHHHcC
Q 013952 355 WQFYGDNVGD--------TVLFGD--NDL-------ASATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAIAKVARVQ 413 (433)
Q Consensus 355 ~~~~g~~~~~--------~~~~~~--~~~-------~~~~~~~~~~~~~---~~~l~G~~~~g~~~~~~-~~~~~~~~~~ 413 (433)
.+ |+++.+ .+.... ..+ ...+.+|.|++++ +++|||+|++|++++|+ +.++.||+++
T Consensus 402 ~v--Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~ 479 (519)
T 3qfa_A 402 AC--GLSEEKAVEKFGEENIEVYHSYFWPLEWTIPSRDNNKCYAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCG 479 (519)
T ss_dssp EE--ECCHHHHHHHHCGGGEEEEEEEECCHHHHTTTCCTTTEEEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred Ee--cCCHHHHHhhCCCCCEEEEEEeccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCC
Confidence 55 766421 121111 100 0135689998873 59999999999998885 9999999999
Q ss_pred CCCCChhhhcccCCCccc
Q 013952 414 PSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~ 431 (433)
+|++||..+.-+-+++++
T Consensus 480 ~t~~~l~~~~~~hPt~~E 497 (519)
T 3qfa_A 480 LTKKQLDSTIGIHPVCAE 497 (519)
T ss_dssp CBHHHHHHSCCCTTCGGG
T ss_pred CCHHHHhccccCCCChHH
Confidence 999988776666555554
No 47
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=4.7e-46 Score=363.45 Aligned_cols=391 Identities=23% Similarity=0.268 Sum_probs=278.1
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC----CCCCCccccccCCCC----C-CCCCCccccc-CCC-
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP----YERPALSKAYLFPEG----T-ARLPGFHVCV-GSG- 72 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~----~~~~~~~~~~~~~~~----~-~~~~~~~~~~-~~~- 72 (433)
+|||+|||||+||+++|.+|++.|++ |+|||++ ... ...|..++.++.... . ....++.... ..+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~ 77 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMK---VGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDL 77 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCe---EEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCH
Confidence 37999999999999999999999987 9999998 210 000111111110000 0 0000000000 000
Q ss_pred -------------CCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeC-CCcEEecceEEEccCCCccccCCCCCCCCCC
Q 013952 73 -------------GERLLPEWYKEKGIELILSTEIVRADIASKTLLSA-TGLIFKYQILVIATGSTVLRLTDFGVEGADA 138 (433)
Q Consensus 73 -------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~-~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~ 138 (433)
....+..++++.+++++.++.+ .++ .+.+.+. ++.++.||+||+|||++|..|+ +++.+.
T Consensus 78 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i~--~~~~~v~~~g~~~~~d~lviAtG~~p~~~~---~~g~~~ 151 (455)
T 2yqu_A 78 PALMAHKDKVVQANTQGVEFLFKKNGIARHQGTAR-FLS--ERKVLVEETGEELEARYILIATGSAPLIPP---WAQVDY 151 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-ESS--SSEEEETTTCCEEEEEEEEECCCEEECCCT---TBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Eec--CCeEEEeeCCEEEEecEEEECCCCCCCCCC---CCCCCc
Confidence 0001134556679999998544 343 3444443 5678999999999999998877 455443
Q ss_pred CCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcC
Q 013952 139 KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKG 218 (433)
Q Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~G 218 (433)
.++++. .++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++.|
T Consensus 152 ~~v~~~---~~~~~~----~-~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-~~~~~~~~l~~~l~~~G 222 (455)
T 2yqu_A 152 ERVVTS---TEALSF----P-EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-MDLEVSRAAERVFKKQG 222 (455)
T ss_dssp SSEECH---HHHTCC----S-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-SCHHHHHHHHHHHHHHT
T ss_pred CcEech---HHhhcc----c-cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-cCHHHHHHHHHHHHHCC
Confidence 455533 222211 1 14789999999999999999999999999999999988875 79999999999999999
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh---hccccc-CCCcEEeCCCCCCCCCCeEEc
Q 013952 219 IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF---KGQVAE-NKGGIETDDFFKTSADDVYAV 294 (433)
Q Consensus 219 V~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~---~~~~~~-~~g~i~vd~~~~t~~~~vfa~ 294 (433)
|+++++++|++++.+ +....+.+.+|+++++|.||+|+|++|+..++ ..++.. .+|++.||+++||+.|+|||+
T Consensus 223 v~i~~~~~V~~i~~~--~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd~~~~t~~~~iya~ 300 (455)
T 2yqu_A 223 LTIRTGVRVTAVVPE--AKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLRTRVPHIYAI 300 (455)
T ss_dssp CEEECSCCEEEEEEE--TTEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCCTTSBCSSTTEEEC
T ss_pred CEEEECCEEEEEEEe--CCEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeECCCcccCCCCEEEE
Confidence 999999999999873 22356777788899999999999999998763 335655 457899999999999999999
Q ss_pred CccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC------CcEEEE
Q 013952 295 GDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDTVLF 368 (433)
Q Consensus 295 Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~~~~ 368 (433)
|||+..+ ..+..|..||+.+|.||.+.. ....+..+|++....+ .+..+|.++ +..+..
T Consensus 301 GD~~~~~----------~~~~~A~~~g~~aa~~i~~~~---~~~~~~~~p~~~~~~~--~~a~~G~~~~~a~~~g~~~~~ 365 (455)
T 2yqu_A 301 GDVVRGP----------MLAHKASEEGIAAVEHMVRGF---GHVDYQAIPSVVYTHP--EIAAVGYTEEELKAQGIPYKV 365 (455)
T ss_dssp GGGSSSC----------CCHHHHHHHHHHHHHHHHHSC---CCCCGGGCCEEECSSS--EEEEEECCHHHHHHHTCCEEE
T ss_pred ecCCCCc----------cCHHHHHHhHHHHHHHHcCCC---ccCCCCCCCEEEEcCC--ceEEEECCHHHHHHcCCCEEE
Confidence 9999765 467789999999999999742 1245566776654444 444556553 222333
Q ss_pred cCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHHH-HHHHHHHHcCCCCCChhhhcccCCCcc
Q 013952 369 GDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEEN-KAIAKVARVQPSVESLDVLKNEGLSFA 430 (433)
Q Consensus 369 ~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (433)
+..+.. ....+|.|+++ ++|+|+|++++|+.+.++ +.++.+|++++|++|+..+..+-++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~~~~~~~~~Pt~~ 438 (455)
T 2yqu_A 366 GKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLS 438 (455)
T ss_dssp EEEEGGGCHHHHHHTCCCCEEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTH
T ss_pred EEEEcccchHHHhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHH
Confidence 222111 23467889888 489999999999988885 999999999999998877655555544
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=5.9e-47 Score=372.71 Aligned_cols=395 Identities=19% Similarity=0.187 Sum_probs=275.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCC-CCCccccccCC-----------CC---------CCCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYE-RPALSKAYLFP-----------EG---------TARL 62 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~-~~~~~~~~~~~-----------~~---------~~~~ 62 (433)
+|||+|||||+||++||..|++.|++ |+|||+. ..++. +..+.+.++.. .. ...+
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~---V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 82 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKK---VAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGW 82 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCe---EEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCc
Confidence 58999999999999999999999987 9999974 22211 11111111100 00 0000
Q ss_pred -----CCcccc--c------CCCCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC--cEEecceEEEccCCCccc
Q 013952 63 -----PGFHVC--V------GSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATGSTVLR 127 (433)
Q Consensus 63 -----~~~~~~--~------~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG~~~~~ 127 (433)
+...+. . ...........++..+++++.+ .+..+++....+...++ .++.||+||||||+.|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~ 161 (488)
T 3dgz_A 83 EVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRY 161 (488)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCC
Confidence 000000 0 0000001122345679999886 55555554445555566 479999999999999987
Q ss_pred cCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHH
Q 013952 128 LTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIA 207 (433)
Q Consensus 128 ~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~ 207 (433)
|+. +||.+. ..+ +..++..+ . ..+++++|||+|++|+|+|..|.+.|.+|+++++.. +++. +++++.
T Consensus 162 p~~--i~G~~~-~~~---~~~~~~~~----~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l~~-~d~~~~ 228 (488)
T 3dgz_A 162 PTQ--VKGALE-YGI---TSDDIFWL----K-ESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PLRG-FDQQMS 228 (488)
T ss_dssp CSS--CBTHHH-HCB---CHHHHTTC----S-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT-SCHHHH
T ss_pred CCC--CCCccc-ccC---cHHHHHhh----h-hcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-cccc-CCHHHH
Confidence 761 355321 111 22222221 1 157899999999999999999999999999998864 5554 799999
Q ss_pred HHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EEECCEEEEcccCccChhhh---hcccccC--CCc
Q 013952 208 AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEADIVVVGVGGRPLISLF---KGQVAEN--KGG 277 (433)
Q Consensus 208 ~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---g~--~i~~d~vi~a~G~~p~~~~~---~~~~~~~--~g~ 277 (433)
+.+.+.+++.||++++++.+.++...+++. ..+.+.+ |+ ++++|.|++|+|++|+++++ ..++..+ +|+
T Consensus 229 ~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~-~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~ 307 (488)
T 3dgz_A 229 SLVTEHMESHGTQFLKGCVPSHIKKLPTNQ-LQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQK 307 (488)
T ss_dssp HHHHHHHHHTTCEEEETEEEEEEEECTTSC-EEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCC
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEEEcCCCc-EEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCe
Confidence 999999999999999999999998743443 3444433 54 47999999999999999874 3456654 688
Q ss_pred EEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEE
Q 013952 278 IETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQF 357 (433)
Q Consensus 278 i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 357 (433)
|.||+++||+.|+|||+|||+.... .++..|..||+++|.||++.... ...|..+|++++..++++.+
T Consensus 308 i~vd~~~~t~~~~IyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~g~~~~--~~~~~~~p~~~~~~p~~a~v- 375 (488)
T 3dgz_A 308 IIVDAQEATSVPHIYAIGDVAEGRP---------ELTPTAIKAGKLLAQRLFGKSST--LMDYSNVPTTVFTPLEYGCV- 375 (488)
T ss_dssp BCCCTTSBCSSTTEEECGGGBTTCC---------CCHHHHHHHHHHHHHHHHSCCCC--CCCCTTCCEEECSSSEEEEE-
T ss_pred EeECCCCccCCCCEEEeEEecCCCC---------cchhHHHHHHHHHHHHHcCCCCc--cCCCCCCCEEEECCCCeEEE-
Confidence 9999999999999999999985321 56778999999999999975432 25778899888776666555
Q ss_pred ecCCCC--------cEEEEc--CCCcc-------ccCCcEEEEEEe---CCEEEEEEEecCChHHH-HHHHHHHHcCCCC
Q 013952 358 YGDNVG--------DTVLFG--DNDLA-------SATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAIAKVARVQPSV 416 (433)
Q Consensus 358 ~g~~~~--------~~~~~~--~~~~~-------~~~~~~~~~~~~---~~~l~G~~~~g~~~~~~-~~~~~~~~~~~~~ 416 (433)
|+++. ..+... ...+. ..+.+|.|++++ +++|||+|++|++++|+ +.++.||++++|+
T Consensus 376 -Glte~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~ 454 (488)
T 3dgz_A 376 -GLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASY 454 (488)
T ss_dssp -ECCHHHHHHHHCGGGEEEEEEECCCHHHHHTTCCCTTCEEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBH
T ss_pred -eCCHHHHHhhCCCCcEEEEEccccchhhhhhccCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCH
Confidence 66642 112111 11111 125789998874 69999999999998885 9999999999999
Q ss_pred CChhhhcccCCCcc
Q 013952 417 ESLDVLKNEGLSFA 430 (433)
Q Consensus 417 ~~~~~~~~~~~~~~ 430 (433)
+||..+.-+-++++
T Consensus 455 ~~l~~~~~~hPt~~ 468 (488)
T 3dgz_A 455 AQVMQTVGIHPTCS 468 (488)
T ss_dssp HHHHTSCCCSSCST
T ss_pred HHHhccccCCCChH
Confidence 98877655555544
No 49
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.1e-45 Score=360.54 Aligned_cols=387 Identities=22% Similarity=0.230 Sum_probs=274.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC---CCCCCCccccccCCCC-------CCCC--CCcccccCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA---PYERPALSKAYLFPEG-------TARL--PGFHVCVGS 71 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~---~~~~~~~~~~~~~~~~-------~~~~--~~~~~~~~~ 71 (433)
++||+|||||+||++||.+|++.|++ |+|||++ .. .+..|..++.++.... .... .++......
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~---V~lie~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~ 81 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIP---TVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPR 81 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCE---EEEEccCCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCc
Confidence 58999999999999999999999987 9999996 10 0111112221110000 0000 000000000
Q ss_pred CCCC---------------CCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCC
Q 013952 72 GGER---------------LLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGA 136 (433)
Q Consensus 72 ~~~~---------------~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~ 136 (433)
.... ....++++.+++++.++.+. ++ .++|.+.+ +++.||+||||||++|+.|+. ++ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~~--~~~v~v~~-~~~~~d~lviATGs~p~~~~~--~~-~ 154 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-LD--GKQVEVDG-QRIQCEHLLLATGSSSVELPM--LP-L 154 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-EE--TTEEEETT-EEEECSEEEECCCEEECCBTT--BC-C
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-cc--CCEEEEee-EEEEeCEEEEeCCCCCCCCCC--CC-c
Confidence 0000 01245667899999986554 44 56787766 789999999999999987653 33 2
Q ss_pred CCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHh
Q 013952 137 DAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 216 (433)
Q Consensus 137 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~ 216 (433)
+ ..++ +..+...+ +. .+++++|||+|++|+|+|..|.+.|.+|+++++.+.+++. +++++.+.+.+.+++
T Consensus 155 ~-~~v~---~~~~~~~~----~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-~~~~~~~~l~~~l~~ 224 (458)
T 1lvl_A 155 G-GPVI---SSTEALAP----KA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT-YDSELTAPVAESLKK 224 (458)
T ss_dssp B-TTEE---CHHHHTCC----SS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT-SCHHHHHHHHHHHHH
T ss_pred c-CcEe---cHHHHhhh----hc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc-cCHHHHHHHHHHHHH
Confidence 2 2344 33333221 11 4789999999999999999999999999999999999884 899999999999999
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEECCEEEEcccCccChhhh---hcccccCCCcEEeCCCCCCCCCCe
Q 013952 217 KGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRPLISLF---KGQVAENKGGIETDDFFKTSADDV 291 (433)
Q Consensus 217 ~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g--~~i~~d~vi~a~G~~p~~~~~---~~~~~~~~g~i~vd~~~~t~~~~v 291 (433)
.||+++++++|.+++. ++ ..+...+| +++++|.|++|+|++|+++++ ..++..++++|.||++|||+.|+|
T Consensus 225 ~gv~i~~~~~v~~i~~--~~--v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~~i~vd~~~~t~~~~I 300 (458)
T 1lvl_A 225 LGIALHLGHSVEGYEN--GC--LLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGAAIAIDERCQTSMHNV 300 (458)
T ss_dssp HTCEEETTCEEEEEET--TE--EEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETTEECCCTTCBCSSTTE
T ss_pred CCCEEEECCEEEEEEe--CC--EEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCCEEeECCCCcCCCCCE
Confidence 9999999999999975 22 34554456 689999999999999999753 335555322899999999999999
Q ss_pred EEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEecCCC------CcE
Q 013952 292 YAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYGDNV------GDT 365 (433)
Q Consensus 292 fa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g~~~------~~~ 365 (433)
||+|||+..+ ..+..|..||+.+|.||.+.. ....+..+|++.+..++ +..+|.++ +..
T Consensus 301 ya~GD~~~~~----------~~~~~A~~~g~~aa~~i~g~~---~~~~~~~~p~~~~~~p~--~a~vG~~e~~a~~~g~~ 365 (458)
T 1lvl_A 301 WAIGDVAGEP----------MLAHRAMAQGEMVAEIIAGKA---RRFEPAAIAAVCFTDPE--VVVVGKTPEQASQQGLD 365 (458)
T ss_dssp EECGGGGCSS----------CCHHHHHHHHHHHHHHHTTCC---CCCCCSCCCEEECSSSE--EEEEECCHHHHHHTTCC
T ss_pred EEeeccCCCc----------ccHHHHHHHHHHHHHHhcCCC---ccCCCCCCCEEEECCCC--eEEEeCCHHHHHHcCCC
Confidence 9999999865 467789999999999999742 12456677776554444 44456653 222
Q ss_pred EEEcCCCcc--------ccCCcEEEEEE--eCCEEEEEEEecCChHH-HHHHHHHHHcCCCCCChhhhcccCCCcc
Q 013952 366 VLFGDNDLA--------SATHKFGTYWI--KDGKVVGVFLESGTPEE-NKAIAKVARVQPSVESLDVLKNEGLSFA 430 (433)
Q Consensus 366 ~~~~~~~~~--------~~~~~~~~~~~--~~~~l~G~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (433)
+..+..+.. ....+|.|+++ ++++|+|++++|+.+.+ ++.++.+|++++|++|+..+.-+-++++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~g~~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~ 441 (458)
T 1lvl_A 366 CIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLG 441 (458)
T ss_dssp EEEEEEEGGGCHHHHHTTCCCCEEEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTT
T ss_pred EEEEEEECccchhhhhcCCCcEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHH
Confidence 333222110 23467999888 57999999999999888 4999999999999997776654444443
No 50
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=100.00 E-value=2.5e-44 Score=362.72 Aligned_cols=394 Identities=17% Similarity=0.194 Sum_probs=271.6
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCC-CccccccCCCC----------------------C
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERP-ALSKAYLFPEG----------------------T 59 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~-~~~~~~~~~~~----------------------~ 59 (433)
..+||+||||||||++||.+|++.|++ |+|+|+. ..+.... .+.+.++.... .
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~---v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAK---TAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCe---EEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 358999999999999999999999987 9999974 2211111 11111100000 0
Q ss_pred CCCCCcccccCCCCCCC---------------CHhHHHhCCcEEEeCceEEEEECCCCEEEeCCC--cEEecceEEEccC
Q 013952 60 ARLPGFHVCVGSGGERL---------------LPEWYKEKGIELILSTEIVRADIASKTLLSATG--LIFKYQILVIATG 122 (433)
Q Consensus 60 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~--~~~~~d~lvlAtG 122 (433)
...+... .. ..... ....+...+++++.+ ....++.....+...+| .++.||+||||||
T Consensus 183 ~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtG 258 (598)
T 2x8g_A 183 WSLDRSK--IS-HNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLISPHEVQITDKNQKVSTITGNKIILATG 258 (598)
T ss_dssp CCCCGGG--CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEETTEEEEECTTCCEEEEEEEEEEECCC
T ss_pred ccccCCc--Cc-cCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCC
Confidence 0000000 00 00000 011244578999876 55556654444444556 4699999999999
Q ss_pred CCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCC
Q 013952 123 STVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLF 202 (433)
Q Consensus 123 ~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~ 202 (433)
++|+.|+ +||.+. ..++. .++.. + ...+++++|||+|++|+|+|..|++.|.+|+++++. .+++. +
T Consensus 259 s~p~~p~---i~G~~~-~~~~~---~~~~~----~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~-~ 324 (598)
T 2x8g_A 259 ERPKYPE---IPGAVE-YGITS---DDLFS----L-PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG-F 324 (598)
T ss_dssp EEECCCS---STTHHH-HCEEH---HHHTT----C-SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT-S
T ss_pred CCCCCCC---CCCccc-ceEcH---HHHhh----C-ccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc-C
Confidence 9998877 566431 12221 12111 1 124789999999999999999999999999999987 55554 7
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEec-----CC---CcE-EEEEeCCCcEEE--CCEEEEcccCccChhhh---h
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTN-----AD---GEV-KEVKLKDGRTLE--ADIVVVGVGGRPLISLF---K 268 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~-----~~---g~~-~~v~~~~g~~i~--~d~vi~a~G~~p~~~~~---~ 268 (433)
++++.+.+.+.+++.||++++++.+.++... .+ +.+ ..+.+.+|++++ +|.|++|+|++|+++++ .
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~ 404 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCET 404 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGG
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchh
Confidence 9999999999999999999999988888542 12 322 233346776655 99999999999999864 3
Q ss_pred ccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEE
Q 013952 269 GQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFY 347 (433)
Q Consensus 269 ~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~ 347 (433)
.++.. ++|+|.||+++||+.|+|||+|||+.... ..+..|..||+.+|.||.+.... ...|..+|+++
T Consensus 405 ~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~~~---------~~~~~A~~~g~~aa~~i~~~~~~--~~~~~~~p~~~ 473 (598)
T 2x8g_A 405 VGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAGKP---------QLTPVAIQAGRYLARRLFAGATE--LTDYSNVATTV 473 (598)
T ss_dssp GCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTTSC---------CCHHHHHHHHHHHHHHHHHCCCC--CCCCTTCCEEE
T ss_pred cCceECCCCcEEeCCCCcCCCCCEEEEeeecCCCC---------ccHHHHHHhHHHHHHHHhcCCCc--ccCCCCCcEEE
Confidence 35666 56889999999999999999999964321 56788999999999999975322 25677888877
Q ss_pred EeecccceEEecCCCCc--------EEEEcCCCcc---------ccCCcEEEEEEe---CCEEEEEEEecCChHHH-HHH
Q 013952 348 SRAFDLSWQFYGDNVGD--------TVLFGDNDLA---------SATHKFGTYWIK---DGKVVGVFLESGTPEEN-KAI 406 (433)
Q Consensus 348 ~~~~~~~~~~~g~~~~~--------~~~~~~~~~~---------~~~~~~~~~~~~---~~~l~G~~~~g~~~~~~-~~~ 406 (433)
+..++++.+ |+++.+ .+.....+.. ....+|.|++++ +|+|+|+|++|+.++++ +.+
T Consensus 474 ~~~~~~a~v--Gl~e~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kli~~~~~~~~ilG~~~~g~~a~~~i~~~ 551 (598)
T 2x8g_A 474 FTPLEYGAC--GLSEEDAIEKYGDKDIEVYHSNFKPLEWTVAHREDNVCYMKLVCRKSDNMRVLGLHVLGPNAGEITQGY 551 (598)
T ss_dssp CSSSCEEEE--ECCHHHHHHHHCGGGEEEEEEEECCTHHHHTTCCSSCEEEEEEEETTTTTEEEEEEEESTTHHHHHHHH
T ss_pred ECCCceEEE--eCCHHHHHhhCCCCcEEEEEEeccchhHHhhcCCCCcEEEEEEEecCCCCEEEEEEEECCCHHHHHHHH
Confidence 766666554 655311 1222111100 124678888873 79999999999998885 999
Q ss_pred HHHHHcCCCCCChhhhcccCCCccc
Q 013952 407 AKVARVQPSVESLDVLKNEGLSFAS 431 (433)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (433)
+.||++++|++||..+.-+-+++++
T Consensus 552 ~~ai~~~~t~~~l~~~~~~hPt~~e 576 (598)
T 2x8g_A 552 AVAIKMGATKADFDRTIGIHPTCSE 576 (598)
T ss_dssp HHHHHTTCBHHHHHHSCCCSSCSGG
T ss_pred HHHHHcCCCHHHHhhccccCCCHHH
Confidence 9999999999988876555555543
No 51
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9e-41 Score=310.43 Aligned_cols=295 Identities=22% Similarity=0.262 Sum_probs=213.0
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhH
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 80 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (433)
|+...|||+||||||||++||.+|+++|++ |+|||+.. +.+.++.....+++|++....+.+........
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~---V~liE~~~-------~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~ 71 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLK---TVMIERGI-------PGGQMANTEEVENFPGFEMITGPDLSTKMFEH 71 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSC-------TTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEecCC-------CCCeeecccccCCcCCccccchHHHHHHHHHH
Confidence 554579999999999999999999999987 99999871 12222322233344443322111112223444
Q ss_pred HHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCC---CCCEEEecCHHHHHHHHHHH
Q 013952 81 YKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVEAI 157 (433)
Q Consensus 81 ~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~~ 157 (433)
..+.+..+..+..+...+.....+...++++++||++|||||++|+.|+ +||.+ ...++++... +.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~~~~---ipG~~~~~~~~v~~~~~~-~~------- 140 (312)
T 4gcm_A 72 AKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIG---VPGEQELGGRGVSYCAVC-DG------- 140 (312)
T ss_dssp HHHTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEECCCC---CTTTTTTBTTTEESCHHH-HG-------
T ss_pred HhhccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccCcCC---CCChhhhCCccEEeeecc-Cc-------
Confidence 5567778877777777777777777788889999999999999999887 45543 2344432211 11
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc
Q 013952 158 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 237 (433)
Q Consensus 158 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~ 237 (433)
...++++++|||+|++|+|+|..|.+.|.+|+++++.+++++. .. ...+.+++.++.......+..+... +..
T Consensus 141 ~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 213 (312)
T 4gcm_A 141 AFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQ---RI---LQDRAFKNDKIDFIWSHTLKSINEK-DGK 213 (312)
T ss_dssp GGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC---HH---HHHHHHHCTTEEEECSEEEEEEEEE-TTE
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccCcc---hh---HHHHHHHhcCcceeeecceeeeecc-ccc
Confidence 1126899999999999999999999999999999999887763 11 2235567888998888777776652 221
Q ss_pred EEE---EEe--CCCcEEECCEEEEcccCccChhhhhc-ccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCccccc
Q 013952 238 VKE---VKL--KDGRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 311 (433)
Q Consensus 238 ~~~---v~~--~~g~~i~~d~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~ 311 (433)
... ... .++..+++|.|++++|.+|+..++.. ++..++|+|.||++||||+|+|||+|||++.+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~~~G~I~vd~~~~Ts~pgIyA~GDv~~~~~--------- 284 (312)
T 4gcm_A 214 VGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGL--------- 284 (312)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBCTTSCBCCCTTSBCSSTTEEECSTTBSCSC---------
T ss_pred cccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceecCCCeEeeCCCCccCCCCEEEEeecCCCcc---------
Confidence 111 111 23357999999999999999988755 455578899999999999999999999987432
Q ss_pred ccHHHHHHHHHHHHHHHhccC
Q 013952 312 EHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 312 ~~~~~A~~~g~~aa~~i~~~~ 332 (433)
.++..|..||+.||.||...+
T Consensus 285 ~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 285 RQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp CSHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 567889999999999997643
No 52
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=5.1e-41 Score=329.51 Aligned_cols=297 Identities=20% Similarity=0.261 Sum_probs=227.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHH--H
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY--K 82 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 82 (433)
+++|||||||+||+++|..|++.+++ |+|||++...+.+|.+.... ...+.... ....+.... .
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~---VtLId~~~~~~~~PlL~~va-----~G~l~~~~------i~~p~~~~~~~~ 107 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYN---VSIISPRSYFLFTPLLPSAP-----VGTVDEKS------IIEPIVNFALKK 107 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCE---EEEEESSSEEECGGGGGGTT-----TTSSCGGG------GEEEHHHHHTTC
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCc---EEEECCCCCcccccchhHHh-----hccccHHH------hhhhHHHHHHhh
Confidence 46899999999999999999887665 99999993333334332110 00010000 001112222 2
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeC--------------------CCcEEecceEEEccCCCccccCCCCCCCCCCCCEE
Q 013952 83 EKGIELILSTEIVRADIASKTLLSA--------------------TGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIF 142 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~--------------------~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~ 142 (433)
+.+++++.+ +|+.||++.++|.+. ++.++.||+||||||+.|..++ +||.. ++.+
T Consensus 108 ~~~v~~~~~-~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~---ipG~~-e~a~ 182 (502)
T 4g6h_A 108 KGNVTYYEA-EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFG---IPGVT-DYGH 182 (502)
T ss_dssp SSCEEEEEE-EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTT---CTTHH-HHCE
T ss_pred cCCeEEEEE-EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCC---ccCcc-cccC
Confidence 357899886 899999999988753 3568999999999999988776 67754 4567
Q ss_pred EecCHHHHHHHHHHHHhc---------------CCCcEEEECCCHHHHHHHHHHHhC--------------CCeEEEEcc
Q 013952 143 YLREIDDADKLVEAIKAK---------------KNGKAVVVGGGYIGLELSAALKIN--------------NIDVSMVYP 193 (433)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~---------------~~~~v~ViG~G~~g~e~a~~l~~~--------------g~~V~li~~ 193 (433)
.++++.++..+++.+... ...+++|||+|++|+|+|..|.+. ..+|++++.
T Consensus 183 ~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~ 262 (502)
T 4g6h_A 183 FLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEA 262 (502)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecc
Confidence 889999998887665321 124799999999999999988754 368999999
Q ss_pred CCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc----EEECCEEEEcccCccChhhh--
Q 013952 194 EPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR----TLEADIVVVGVGGRPLISLF-- 267 (433)
Q Consensus 194 ~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~----~i~~d~vi~a~G~~p~~~~~-- 267 (433)
.+++++. +++++.+.+++.|++.||++++++.|++++. ++........+|+ ++++|.+|||+|.+|+....
T Consensus 263 ~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l 339 (502)
T 4g6h_A 263 LPIVLNM-FEKKLSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDL 339 (502)
T ss_dssp SSSSSTT-SCHHHHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHH
T ss_pred ccccccC-CCHHHHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhH
Confidence 9999986 8999999999999999999999999999965 5555556666763 69999999999999985322
Q ss_pred --hccccc-CCCcEEeCCCCCC-CCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhcc
Q 013952 268 --KGQVAE-NKGGIETDDFFKT-SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 331 (433)
Q Consensus 268 --~~~~~~-~~g~i~vd~~~~t-~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 331 (433)
..+... .+|+|.||++||+ ++|||||+|||+..+.+ +++..|.+||+++|+||.+.
T Consensus 340 ~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p--------~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 340 FKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLP--------PTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp HHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSC--------CCHHHHHHHHHHHHHHHHHH
T ss_pred HHhccccccCCCceeECCccccCCCCCEEEEEcccCCCCC--------CchHHHHHHHHHHHHHHHHH
Confidence 223333 5689999999999 89999999999987765 78899999999999999653
No 53
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=8.4e-40 Score=307.08 Aligned_cols=301 Identities=17% Similarity=0.209 Sum_probs=222.4
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCcccccc--CCC-CCCCCCCcccccCCCCCCCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYL--FPE-GTARLPGFHVCVGSGGERLL 77 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~ 77 (433)
||++++||+|||||++|+++|.+|++.|++ |+|+|++.... +.+. .+. .....+.++..........+
T Consensus 1 m~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~g------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 71 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTGLFAGFYVGMRGLS---FRFVDPLPEPG------GQLTALYPEKYIYDVAGFPKVYAKDLVKGL 71 (335)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSSSSC------HHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCCCcCcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCC------CeeeccCCCceeeccCCCCCCCHHHHHHHH
Confidence 777789999999999999999999999887 99999982111 1110 000 00111111110000111223
Q ss_pred HhHHHhCCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCC---ccccCCCCCCCCC---CCCEEE-ecCHH
Q 013952 78 PEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGST---VLRLTDFGVEGAD---AKNIFY-LREID 148 (433)
Q Consensus 78 ~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~---~~~~~~~~~~g~~---~~~v~~-~~~~~ 148 (433)
.+.+.+.+++++.++.|..++.+.. .|.+.++.++.||+||+|||+. |..|+ ++|.+ ...+++ +.+..
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~---i~g~~~~~~~~~~~~~~~~~ 148 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIG---APGEREFEGRGVYYAVKSKA 148 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCC---CTTTTTTBTTTEESSCSCGG
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCC---CCChhhccCcEEEEecCchh
Confidence 3445567899988889999887653 4666677789999999999995 54444 45543 223432 22221
Q ss_pred HHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEE
Q 013952 149 DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAV 228 (433)
Q Consensus 149 ~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~ 228 (433)
...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+ .++..+.+.+.+++.||++++++.+.
T Consensus 149 ----------~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~---~~~~~~~l~~~l~~~gv~v~~~~~v~ 215 (335)
T 2zbw_A 149 ----------EFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA---HEASVKELMKAHEEGRLEVLTPYELR 215 (335)
T ss_dssp ----------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS---CHHHHHHHHHHHHTTSSEEETTEEEE
T ss_pred ----------hcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc---cHHHHHHHHhccccCCeEEecCCcce
Confidence 12578999999999999999999999999999999887765 46778888999999999999999999
Q ss_pred EEEecCCCcEEEEEeC---CC--cEEECCEEEEcccCccChhhhhc-ccccCCCcEEeCCCCCCCCCCeEEcCccccccc
Q 013952 229 GFTTNADGEVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPM 302 (433)
Q Consensus 229 ~i~~~~~g~~~~v~~~---~g--~~i~~d~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~ 302 (433)
++.. ++.+..+.+. +| +++++|.||+|+|++|+.+++.. ++..++|++.||+++||+.|+|||+|||+..+.
T Consensus 216 ~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~ 293 (335)
T 2zbw_A 216 RVEG--DERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALEKNKIKVDTTMATSIPGVYACGDIVTYPG 293 (335)
T ss_dssp EEEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEETTEEECCTTCBCSSTTEEECSTTEECTT
T ss_pred eEcc--CCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceeccCCeeeeCCCCCCCCCCEEEeccccccCc
Confidence 9987 4555566665 66 57999999999999999877754 555567899999999999999999999998653
Q ss_pred cccCcccccccHHHHHHHHHHHHHHHhccCCCC
Q 013952 303 KLYREMRRVEHVDHARKSAEQAVKTIMATEGGK 335 (433)
Q Consensus 303 ~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~ 335 (433)
. ..++..|..||+.+|.||.+...+.
T Consensus 294 ~-------~~~~~~A~~~g~~aa~~i~~~l~~~ 319 (335)
T 2zbw_A 294 K-------LPLIVLGFGEAAIAANHAAAYANPA 319 (335)
T ss_dssp C-------CCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred c-------hhhhhhhHHHHHHHHHHHHHHhhhh
Confidence 1 1678889999999999998876543
No 54
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=4.5e-40 Score=306.08 Aligned_cols=297 Identities=21% Similarity=0.216 Sum_probs=209.3
Q ss_pred CCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-C--CCCCCCCccccccCCCCCCCCCCccccc-CCCCCCCC
Q 013952 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-V--APYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLL 77 (433)
Q Consensus 2 m~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (433)
|++.|||+||||||||++||.+|+++|++ |+|+|+. . .....+..++.. .+++++++... +.+.....
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~---v~liE~~~~gg~~~~G~~~~~~~-----i~~~~g~~~~i~~~~l~~~~ 72 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLK---PVMYEGFMAGGVAAGGQLTTTTI-----IENFPGFPNGIDGNELMMNM 72 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSGGGCCTTCGGGGSSE-----ECCSTTCTTCEEHHHHHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCcccCCCcCChHH-----hhhccCCcccCCHHHHHHHH
Confidence 55679999999999999999999999988 9999998 2 111111111111 12333332211 01112233
Q ss_pred HhHHHhCCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccccCCCCCCCCCC---CCEEEecCHHHHHH
Q 013952 78 PEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA---KNIFYLREIDDADK 152 (433)
Q Consensus 78 ~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~ 152 (433)
...+++.++.+... .+..+....+ .+.+.++.++.||+||||||+.|+.|+ +||.+. ..+... .....
T Consensus 73 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~---ipG~~~~~~~~~~~~---~~~~~ 145 (314)
T 4a5l_A 73 RTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMH---VPGEDKYWQNGVSAC---AICDG 145 (314)
T ss_dssp HHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCC---CTTHHHHBTTTEESC---HHHHT
T ss_pred HHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccC---CCccccccccceeee---hhhhh
Confidence 45566788888775 5555554433 566778889999999999999998887 565432 222221 11111
Q ss_pred HHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEe
Q 013952 153 LVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 232 (433)
Q Consensus 153 ~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~ 232 (433)
.....++++++|||+|++|+|+|..|.+.|.+|+++++.+.... .... ..+.....+++.+....+.++..
T Consensus 146 ---~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~i~~ 216 (314)
T 4a5l_A 146 ---AVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRA---SKTM---QERVLNHPKIEVIWNSELVELEG 216 (314)
T ss_dssp ---TSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEE
T ss_pred ---hhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccc---cchh---hhhhhcccceeeEeeeeeEEEEe
Confidence 11112578999999999999999999999999999998766543 3332 34455677899999998888876
Q ss_pred cCCCcEEEEEe-----CCCcEEECCEEEEcccCccChhhhhcccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCc
Q 013952 233 NADGEVKEVKL-----KDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYRE 307 (433)
Q Consensus 233 ~~~g~~~~v~~-----~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~ 307 (433)
.+.....+.. .+++++++|.+++++|++||++++...+..+++++.||+++|||+|+|||+|||+..+.
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~~~~~~~~G~iv~~~~~Ts~pgIyA~GDv~~~~~----- 290 (314)
T 4a5l_A 217 -DGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEGPKTSVDGVFACGDVCDRVY----- 290 (314)
T ss_dssp -SSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCBTTBCSSTTEEECSTTTCSSC-----
T ss_pred -eeeccceeEEeecccccceeeccccceEecccccChhHhcccceEcCCeeEeCCCCccCCCCEEEEEeccCCcc-----
Confidence 2333333333 34568999999999999999999987776655556699999999999999999998754
Q ss_pred ccccccHHHHHHHHHHHHHHHhccC
Q 013952 308 MRRVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 308 ~~~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
+++..|..+|+.||.++...+
T Consensus 291 ----~~~~~A~~~G~~AA~~~~~yL 311 (314)
T 4a5l_A 291 ----RQAIVAAGSGCMAALSCEKWL 311 (314)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHH
T ss_pred ----hHHHHHHHHHHHHHHHHHHHH
Confidence 467778899999999987543
No 55
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.4e-39 Score=303.57 Aligned_cols=299 Identities=20% Similarity=0.203 Sum_probs=223.7
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCccccc-CCCCCCCCHh
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPE 79 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (433)
|||..+||+|||||++|+++|.+|++.|++ |+|+|+.. ..+.+.........+++.... .......+..
T Consensus 1 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~-------~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (320)
T 1trb_A 1 GTTKHSKLLILGSGPAGYTAAVYAARANLQ---PVLITGME-------KGGQLTTTTEVENWPGDPNDLTGPLLMERMHE 70 (320)
T ss_dssp CCEEEEEEEEECCSHHHHHHHHHHHTTTCC---CEEECCSS-------TTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHH
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEccCC-------CCceEecchhhhhCCCCCCCCCHHHHHHHHHH
Confidence 455679999999999999999999999987 99999761 111111111111222221100 0011122345
Q ss_pred HHHhCCcEEEeCceEEEEECCCCEEE-eCCCcEEecceEEEccCCCccccCCCCCCCCC---CCCEEEecCHHHHHHHHH
Q 013952 80 WYKEKGIELILSTEIVRADIASKTLL-SATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVE 155 (433)
Q Consensus 80 ~~~~~~v~~~~~~~v~~i~~~~~~v~-~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~ 155 (433)
.+.+.+++++.+ .+..++.+.+.+. +.++.++.||+||+|||+.|..|+ +++.+ ...++++......
T Consensus 71 ~~~~~~~~~~~~-~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~~~~---~~g~~~~~~~~~~~~~~~~~~----- 141 (320)
T 1trb_A 71 HATKFETEIIFD-HINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLG---LPSEEAFKGRGVSACATSDGF----- 141 (320)
T ss_dssp HHHHTTCEEECC-CEEEEECSSSSEEEEESSCEEEEEEEEECCCEEECCCC---CHHHHHTBTTTEESCHHHHGG-----
T ss_pred HHHHCCCEEEEe-eeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcCCCC---CCChHHhCCceeEecccCCcc-----
Confidence 566789999998 4889987766444 567778999999999999887776 45432 2344433222211
Q ss_pred HHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC
Q 013952 156 AIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 235 (433)
Q Consensus 156 ~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~ 235 (433)
+ ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+. .++.+.+.+.+.+++.||++++++++.++.. ++
T Consensus 142 -~--~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~~ 214 (320)
T 1trb_A 142 -F--YRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR---AEKILIKRLMDKVENGNIILHTNRTLEEVTG-DQ 214 (320)
T ss_dssp -G--GTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC---CCHHHHHHHHHHHHTSSEEEECSCEEEEEEE-CS
T ss_pred -c--cCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc---cCHHHHHHHHHhcccCCeEEEcCceeEEEEc-CC
Confidence 1 257899999999999999999999999999999987764 3788888889999999999999999999987 34
Q ss_pred CcEEEEEeCC----C--cEEECCEEEEcccCccChhhhhcccccCCCcEEeCCCC-----CCCCCCeEEcCccccccccc
Q 013952 236 GEVKEVKLKD----G--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFF-----KTSADDVYAVGDVATFPMKL 304 (433)
Q Consensus 236 g~~~~v~~~~----g--~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~-----~t~~~~vfa~Gd~~~~~~~~ 304 (433)
+++..|.+.+ | +++++|.||+|+|++|+..+++.++..++|++.||+++ +|+.|+|||+|||+..+.
T Consensus 215 ~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~~~l~~~~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~-- 292 (320)
T 1trb_A 215 MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIY-- 292 (320)
T ss_dssp SSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGTTTSCEETTEECCCCSSSSCTTBCSSTTEEECGGGGCSSS--
T ss_pred CceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhcccccccCceEEECCCcccccccCCCCCEEEcccccCCcc--
Confidence 4666676654 4 57999999999999999998875565567899999997 899999999999998652
Q ss_pred cCcccccccHHHHHHHHHHHHHHHhccCCC
Q 013952 305 YREMRRVEHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 305 ~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
..+..|..+|+.||.+|...+.+
T Consensus 293 -------~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 293 -------RQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred -------hhhhhhhccHHHHHHHHHHHHHh
Confidence 56788999999999999876544
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.8e-38 Score=300.99 Aligned_cols=302 Identities=21% Similarity=0.300 Sum_probs=220.7
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCcccccc--CCC-CCCCCCCcccccCCCCCCCCHh
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYL--FPE-GTARLPGFHVCVGSGGERLLPE 79 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (433)
+.++||+|||||++|+++|.+|++.|++ |+|||+...+ .+.+. .+. .....+++...........+.+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~~------gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 82 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNIS---CRIIESMPQL------GGQLAALYPEKHIYDVAGFPEVPAIDLVESLWA 82 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSS------CHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCC------CCcccccCCCcccccCCCCCCCCHHHHHHHHHH
Confidence 3468999999999999999999999987 9999998211 11110 000 0011121110000011122334
Q ss_pred HHHhCCcEEEeCceEEEEECCCC---EEEeCCCcEEecceEEEccCCCccccCCCCCCC-CC---CCCEEE-ecCHHHHH
Q 013952 80 WYKEKGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVLRLTDFGVEG-AD---AKNIFY-LREIDDAD 151 (433)
Q Consensus 80 ~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g-~~---~~~v~~-~~~~~~~~ 151 (433)
.+.+.+++++.++.|..++...+ .|.+.+++++.||+||+|||+.+..|..++++| .+ ...+++ +++..
T Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~--- 159 (360)
T 3ab1_A 83 QAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE--- 159 (360)
T ss_dssp HHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG---
T ss_pred HHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH---
Confidence 55667899999889999987654 577778888999999999999433332222455 32 223432 22221
Q ss_pred HHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013952 152 KLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 231 (433)
Q Consensus 152 ~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~ 231 (433)
...+++++|||+|.+|+|+|..|.+.+.+|+++++.+.+.+ .++..+.+.+.+++.||+++++++|.++.
T Consensus 160 -------~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~~~~l~~~~~~~gv~i~~~~~v~~i~ 229 (360)
T 3ab1_A 160 -------DFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG---HGKTAHEVERARANGTIDVYLETEVASIE 229 (360)
T ss_dssp -------GGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS---CSHHHHSSHHHHHHTSEEEESSEEEEEEE
T ss_pred -------HcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC---CHHHHHHHHHHhhcCceEEEcCcCHHHhc
Confidence 12578999999999999999999999999999999887765 24667778888899999999999999998
Q ss_pred ecCCCcEEEEEeC--CC--cEEECCEEEEcccCccChhhhhc-ccccCCCcEEeCCCCCCCCCCeEEcCccccccccccC
Q 013952 232 TNADGEVKEVKLK--DG--RTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYR 306 (433)
Q Consensus 232 ~~~~g~~~~v~~~--~g--~~i~~d~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~ 306 (433)
. +++++..|.+. +| +++++|.||+|+|++|+.+++.. ++..++|+|.||+++||+.|+|||+|||+..+..
T Consensus 230 ~-~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~~--- 305 (360)
T 3ab1_A 230 E-SNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELYENALVVDSHMKTSVDGLYAAGDIAYYPGK--- 305 (360)
T ss_dssp E-ETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEETTEEECCTTSBCSSTTEEECSTTEECTTC---
T ss_pred c-CCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccccCeeeecCCCcCCCCCEEEecCccCCCCc---
Confidence 7 34555566664 66 57999999999999999887754 4555678999999999999999999999986531
Q ss_pred cccccccHHHHHHHHHHHHHHHhccCCC
Q 013952 307 EMRRVEHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 307 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
.+++..|..||+.+|.+|.+...+
T Consensus 306 ----~~~~~~A~~~g~~aa~~i~~~l~~ 329 (360)
T 3ab1_A 306 ----LKIIQTGLSEATMAVRHSLSYIKP 329 (360)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHSC
T ss_pred ----cceeehhHHHHHHHHHHHHhhcCC
Confidence 167888999999999999876644
No 57
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=1.7e-38 Score=294.93 Aligned_cols=291 Identities=20% Similarity=0.236 Sum_probs=212.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
++||+|||||++|+++|..|++.|++ |+|+|+. ...+ ........++.............+.+.+++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~---v~li~~~~gG~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIR---TGLMGERFGGQI---------LDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSTTGGG---------GGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCcee---------ccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 37999999999999999999999987 9999876 1111 100000111111000000111234455667
Q ss_pred CCcEEEeCceEEEEECC-----CCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHH
Q 013952 84 KGIELILSTEIVRADIA-----SKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 158 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~-----~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 158 (433)
.+++++.++++..++++ ...|.+.+++++.||++|+|||+.|..|+.++........++.+... .. .
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~------~~--~ 140 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHC------DG--P 140 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHH------HG--G
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccC------cH--h
Confidence 89999999899999865 34677778888999999999999887776433222222344432211 11 1
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCc
Q 013952 159 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGE 237 (433)
Q Consensus 159 ~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~~g~ 237 (433)
...+++++|||+|++|+|+|..|.+.+.+|+++++.+.+. +++. +.+.+++ .||++++++++.++.. ++++
T Consensus 141 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~----~~~~l~~~~gv~v~~~~~v~~i~~-~~~~ 212 (310)
T 1fl2_A 141 LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK---ADQV----LQDKLRSLKNVDIILNAQTTEVKG-DGSK 212 (310)
T ss_dssp GGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC---SCHH----HHHHHHTCTTEEEESSEEEEEEEE-SSSS
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC---ccHH----HHHHHhhCCCeEEecCCceEEEEc-CCCc
Confidence 1257899999999999999999999999999999988763 3433 4455666 6999999999999987 3456
Q ss_pred EEEEEeCC---Cc--EEECCEEEEcccCccChhhhhccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCccccc
Q 013952 238 VKEVKLKD---GR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 311 (433)
Q Consensus 238 ~~~v~~~~---g~--~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~ 311 (433)
+..+.+.+ |+ ++++|.|++|+|++|+.+++...+.. ++|+|.||+++||+.|+|||+|||+..+.
T Consensus 213 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------- 283 (310)
T 1fl2_A 213 VVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPY--------- 283 (310)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECSTTBSCSS---------
T ss_pred EEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhccccccCCCcEEcCCCCccCCCCEEEeecccCCcc---------
Confidence 65666643 53 68999999999999999887655555 56899999999999999999999998753
Q ss_pred ccHHHHHHHHHHHHHHHhccC
Q 013952 312 EHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 312 ~~~~~A~~~g~~aa~~i~~~~ 332 (433)
+++..|..+|+.||.+|....
T Consensus 284 ~~~~~A~~~g~~aa~~i~~~l 304 (310)
T 1fl2_A 284 KQIIIATGEGAKASLSAFDYL 304 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhHHHHHHHHHHHH
Confidence 467889999999999998754
No 58
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3e-38 Score=295.14 Aligned_cols=292 Identities=21% Similarity=0.263 Sum_probs=213.6
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCccccc-CCCCCCCCHhHHH
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEWYK 82 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 82 (433)
.++||+|||||++|+++|.+|++.|++ |+|+|+. .+. +.+.........+++.... .......+.+.++
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~-~~g------g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 76 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLS---TLILEKG-MPG------GQIAWSEEVENFPGFPEPIAGMELAQRMHQQAE 76 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS-CTT------GGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCc---EEEEeCC-CCC------cccccccccccCCCCCCCCCHHHHHHHHHHHHH
Confidence 358999999999999999999999987 9999998 111 1111111111122221100 0011123345566
Q ss_pred hCCcEEEeCceEEEEECC--C---CEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCC---CCEEEecCHHHHHHHH
Q 013952 83 EKGIELILSTEIVRADIA--S---KTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA---KNIFYLREIDDADKLV 154 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~--~---~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~ 154 (433)
+.+++++. ..+..++.. + ..|.+.+++++.||+||+|||+.|..|+ +++.+. ..++.+......
T Consensus 77 ~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~---i~g~~~~~~~~~~~~~~~~~~---- 148 (325)
T 2q7v_A 77 KFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLG---IPGEDNFWGKGVSTCATCDGF---- 148 (325)
T ss_dssp HTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCCC---CTTTTTTBTTTEESCHHHHGG----
T ss_pred HcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCCC---CCChhhccCceEEEeccCCHH----
Confidence 78999988 489988876 4 3677778889999999999999988776 455432 344432221111
Q ss_pred HHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC
Q 013952 155 EAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 234 (433)
Q Consensus 155 ~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~ 234 (433)
...+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. ++.+.+ +.+++.||++++++++.++..
T Consensus 149 ----~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---~~~~~~---~l~~~~gv~i~~~~~v~~i~~-- 216 (325)
T 2q7v_A 149 ----FYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA---NKVAQA---RAFANPKMKFIWDTAVEEIQG-- 216 (325)
T ss_dssp ----GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS---CHHHHH---HHHTCTTEEEECSEEEEEEEE--
T ss_pred ----HcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc---chHHHH---HHHhcCCceEecCCceEEEcc--
Confidence 12578999999999999999999999999999999876542 444322 333456999999999999987
Q ss_pred CCcEEEEEeC---CCc--EEECCEEEEcccCccChhhhhccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcc
Q 013952 235 DGEVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREM 308 (433)
Q Consensus 235 ~g~~~~v~~~---~g~--~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~ 308 (433)
++++..|.+. +|+ ++++|.||+|+|++|+.+++...+.. ++|+|.||+++||+.|+|||+|||+..+.
T Consensus 217 ~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~------ 290 (325)
T 2q7v_A 217 ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDTVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY------ 290 (325)
T ss_dssp SSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTTSCBCTTSCBCCBTTTBCSSTTEEECSTTTCSSC------
T ss_pred CCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhhcccCCCccEecCCCCccCCCCEEEeecccCccH------
Confidence 4555567664 564 79999999999999999887654554 57899999999999999999999998632
Q ss_pred cccccHHHHHHHHHHHHHHHhccCCC
Q 013952 309 RRVEHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 309 ~~~~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
+.+..|..||+.||.||.....+
T Consensus 291 ---~~~~~A~~~g~~aa~~i~~~l~~ 313 (325)
T 2q7v_A 291 ---RQLATSVGAGTRAAMMTERQLAA 313 (325)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999876543
No 59
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=6e-39 Score=308.59 Aligned_cols=320 Identities=20% Similarity=0.193 Sum_probs=238.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
-++|||||||+||++||.+|++.+. ..+|+|||++...+..+.+.. +..... .. .......+.+.+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~-~~~Vtlie~~~~~~~~p~~~~-v~~g~~--~~---------~~~~~~~~~~~~~ 68 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADP-SIEVTLIEPNETYYTCYMSNE-VIGGDR--EL---------ASLRVGYDGLRAH 68 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSCSSEECSTTHHH-HHHTSS--CG---------GGGEECSHHHHHT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCc-CCeEEEEeCCCCCCCccCHHH-HhcCCC--CH---------HHHhhCHHHHHHC
Confidence 3689999999999999999999874 467999999833333333221 111100 00 0011234556678
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCC-CCCCEEEecCHHHHHHHHHHHHhcCCC
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGA-DAKNIFYLREIDDADKLVEAIKAKKNG 163 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~~~~~~~~ 163 (433)
+++++.+ +|..||++.+++.+.++.++.||+||+|||+++..++.++.... ....++.+.+.+++..+.+.+......
T Consensus 69 gv~~i~~-~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 147 (401)
T 3vrd_B 69 GIQVVHD-SALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMDDG 147 (401)
T ss_dssp TCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTT
T ss_pred CCEEEEe-EEEEEEccCcEEEecccceeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcccC
Confidence 9999986 89999999999999999999999999999999888774332211 123456677888888888888876555
Q ss_pred cEEEECCCH-----------HHHHHHHHHHhCC--CeEEEEccCCccCCC-CCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 164 KAVVVGGGY-----------IGLELSAALKINN--IDVSMVYPEPWCMPR-LFTADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 164 ~v~ViG~G~-----------~g~e~a~~l~~~g--~~V~li~~~~~~~~~-~~~~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
..+|++.+. .+++++..+.+.+ .+|+++++.+.+... .+++.+.+.+.+.+++.||++++++.+..
T Consensus 148 ~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~v~~ 227 (401)
T 3vrd_B 148 GVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFSKQAQFTKGWERLYGFGTENALIEWHPGPDAAV 227 (401)
T ss_dssp CEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCTTHHHHHHHHHHHSCTTSTTCSEEEECTTTTCE
T ss_pred CcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccccccccccccHHHHHHHHHHHHhcCcEEEeCceEEE
Confidence 555554332 3466777776655 689999888776431 14556666667777899999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhcccccCCCcEEeCCC-CC-CCCCCeEEcCccccc-cccccC
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDF-FK-TSADDVYAVGDVATF-PMKLYR 306 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~-~~-t~~~~vfa~Gd~~~~-~~~~~~ 306 (433)
++.+.+. ..+.+.+|+++++|.+++++|.+|+..+.+.++..++|+|.||++ || |++|||||+|||+.. +.+
T Consensus 228 v~~~~~~--~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~p--- 302 (401)
T 3vrd_B 228 VKTDTEA--MTVETSFGETFKAAVINLIPPQRAGKIAQSASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMP--- 302 (401)
T ss_dssp EEEETTT--TEEEETTSCEEECSEEEECCCEEECHHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSC---
T ss_pred EEecccc--eEEEcCCCcEEEeeEEEEecCcCCchhHhhccccccCCCEEECCCcceecCCCCEEEecccccCCCCC---
Confidence 9873333 568899999999999999999999876666677668899999987 65 799999999999864 333
Q ss_pred cccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEE
Q 013952 307 EMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYS 348 (433)
Q Consensus 307 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~ 348 (433)
+++..|.+||+++|+||++...++++.++.+..++++
T Consensus 303 -----k~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y~~~~~~ 339 (401)
T 3vrd_B 303 -----KSAYSANSQAKVAAAAVVALLKGEEPGTPSYLNTCYS 339 (401)
T ss_dssp -----BSHHHHHHHHHHHHHHHHHHHHTCCCCCCCEEEEEEE
T ss_pred -----chHHHHHHHHHHHHHHHHHHhcCCCCCCcccCCeEEE
Confidence 6788999999999999998877776666666665554
No 60
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.4e-38 Score=295.07 Aligned_cols=291 Identities=24% Similarity=0.257 Sum_probs=211.9
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
..+||+|||||++|+++|..|++.|++ |+|+|+.. +. +.+.........+++....+......+.+.+++
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~-~g------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFS---VAILDKAV-AG------GLTAEAPLVENYLGFKSIVGSELAKLFADHAAN 84 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSS-TT------GGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHT
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCC-CC------ccccccchhhhcCCCcccCHHHHHHHHHHHHHH
Confidence 458999999999999999999999987 99999961 11 111111111112221000000111223445566
Q ss_pred CCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccccCCCCCCCCCC---CCEEEecCHHHHHHHHHHHH
Q 013952 84 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA---KNIFYLREIDDADKLVEAIK 158 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~~ 158 (433)
.+++++. ..+..++.+.+ .|.+ ++.++.||++|+|||+.|..|+ +++.+. ..++........
T Consensus 85 ~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~~---i~g~~~~~~~~~~~~~~~~~~-------- 151 (319)
T 3cty_A 85 YAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHLG---VKGESEYFGKGTSYCSTCDGY-------- 151 (319)
T ss_dssp TSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCCC---CBTTTTTBTTTEESCHHHHGG--------
T ss_pred cCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccCC---CCChHHhCCceEEEEEecchh--------
Confidence 7999988 58988887665 4555 5668999999999999888776 455432 344432222111
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcE
Q 013952 159 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEV 238 (433)
Q Consensus 159 ~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~ 238 (433)
...+++++|||+|++|+|+|..|.+.+.+|+++++.+.+.. ++. +.+.+++.||++++++++.++.. +++++
T Consensus 152 ~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~---~~~----l~~~l~~~gv~i~~~~~v~~i~~-~~~~v 223 (319)
T 3cty_A 152 LFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC---ENA----YVQEIKKRNIPYIMNAQVTEIVG-DGKKV 223 (319)
T ss_dssp GGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS---CHH----HHHHHHHTTCCEECSEEEEEEEE-SSSSE
T ss_pred hcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC---CHH----HHHHHhcCCcEEEcCCeEEEEec-CCceE
Confidence 12578999999999999999999999999999998876642 444 44556689999999999999987 34445
Q ss_pred EEEEeC---CCc--EEECCEEEEcccCccChhhhhc-cccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCccccc
Q 013952 239 KEVKLK---DGR--TLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRV 311 (433)
Q Consensus 239 ~~v~~~---~g~--~i~~d~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~ 311 (433)
..+.+. +|+ ++++|.||+|+|++|+.+++.. ++.. ++|+|.||+++||+.|+|||+|||+..+.
T Consensus 224 ~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~--------- 294 (319)
T 3cty_A 224 TGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGNF--------- 294 (319)
T ss_dssp EEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC---------
T ss_pred EEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCccEeCCCCCccCCCCEEEeecccCcch---------
Confidence 566664 564 6999999999999999988754 4665 56899999999999999999999998642
Q ss_pred ccHHHHHHHHHHHHHHHhccCCC
Q 013952 312 EHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 312 ~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
.++..|..||+.||.||.....+
T Consensus 295 ~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 295 AQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHHHHHHhhc
Confidence 56888999999999999876543
No 61
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.6e-38 Score=297.84 Aligned_cols=296 Identities=19% Similarity=0.256 Sum_probs=217.9
Q ss_pred CCCC--cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCcccccc--CC-CCCCCCCCcccccCCCCCC
Q 013952 1 MAEK--SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYL--FP-EGTARLPGFHVCVGSGGER 75 (433)
Q Consensus 1 Mm~~--~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~ 75 (433)
||.. ++||+|||||+||+++|..|++.|++ |+|+|++.. +.+.+. .+ ......+++..........
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~------~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQAS---VKIIESLPQ------LGGQLSALYPEKYIYDVAGFPKIRAQELIN 71 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS------SCHHHHHHCTTSEECCSTTCSSEEHHHHHH
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCC---EEEEEcCCC------CCceehhcCCCceEeccCCCCCCCHHHHHH
Confidence 5532 48999999999999999999999987 999999811 111110 00 0111222222111111122
Q ss_pred CCHhHHHhCCcEEEeCceEEEEECCCC---EEEeCCCcEEecceEEEccCC---CccccCCCCCCCCCC---CCEEEecC
Q 013952 76 LLPEWYKEKGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGS---TVLRLTDFGVEGADA---KNIFYLRE 146 (433)
Q Consensus 76 ~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lvlAtG~---~~~~~~~~~~~g~~~---~~v~~~~~ 146 (433)
.+.+.+.+.+++++.++.|..++...+ .|.+.+++ +.||+||+|||+ .|..|+ ++|.+. ..++. .
T Consensus 72 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~~---~~g~~~~~g~~~~~--~ 145 (332)
T 3lzw_A 72 NLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPRKLE---LENAEQYEGKNLHY--F 145 (332)
T ss_dssp HHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEECCCC---CTTGGGGBTTTEES--S
T ss_pred HHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCCCCC---CCChhhccCceEEE--e
Confidence 344555667999999999999998776 67777765 999999999999 777666 455432 33432 2
Q ss_pred HHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCe
Q 013952 147 IDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTV 226 (433)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~ 226 (433)
..+...+ ++++++|||+|.+++|+|..|.+.+.+|+++.+.+.+.+ .+.. .+.+++.||+++++++
T Consensus 146 ~~~~~~~-------~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~--~~~~-----~~~l~~~gv~~~~~~~ 211 (332)
T 3lzw_A 146 VDDLQKF-------AGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA--HEHS-----VENLHASKVNVLTPFV 211 (332)
T ss_dssp CSCGGGG-------BTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS--CHHH-----HHHHHHSSCEEETTEE
T ss_pred cCCHHHc-------CCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc--cHHH-----HHHHhcCCeEEEeCce
Confidence 2222221 578999999999999999999999999999999887754 2222 3447889999999999
Q ss_pred EEEEEecCCCcEEEEEeCC-----CcEEECCEEEEcccCccChhhhhc-ccccCCCcEEeCCCCCCCCCCeEEcCccccc
Q 013952 227 AVGFTTNADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFKG-QVAENKGGIETDDFFKTSADDVYAVGDVATF 300 (433)
Q Consensus 227 v~~i~~~~~g~~~~v~~~~-----g~~i~~d~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~ 300 (433)
+.++.. ++....+.+.+ ++++++|.||+|+|++|+..++.. ++..++|+|.||+++||+.|+|||+|||+..
T Consensus 212 v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~ 289 (332)
T 3lzw_A 212 PAELIG--EDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDIEKNSIVVKSTMETNIEGFFAAGDICTY 289 (332)
T ss_dssp EEEEEC--SSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCEETTEEECCTTSBCSSTTEEECGGGEEC
T ss_pred eeEEec--CCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccccCCeEEeCCCCceecCCEEEccceecC
Confidence 999987 33345566654 357999999999999999887754 5666789999999999999999999999975
Q ss_pred cccccCcccccccHHHHHHHHHHHHHHHhccCCC
Q 013952 301 PMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 301 ~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
+.. .+++..|..||+.||.+|.....+
T Consensus 290 ~~~-------~~~~~~A~~~g~~aa~~i~~~l~~ 316 (332)
T 3lzw_A 290 EGK-------VNLIASGFGEAPTAVNNAKAYMDP 316 (332)
T ss_dssp TTC-------CCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCC-------cceEeeehhhHHHHHHHHHHhhCh
Confidence 422 167899999999999999887654
No 62
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=2.6e-38 Score=295.25 Aligned_cols=291 Identities=20% Similarity=0.227 Sum_probs=215.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
++||+|||||++|+++|.+|++.|++ |+|+|++ +. +.+........++.+...........+.+.+++.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~--~g------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLK---TLVIGET--PG------GQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKY 83 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS--TT------GGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTT
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCc---EEEEecc--CC------CeecccccccccCCCCCCCHHHHHHHHHHHHHHc
Confidence 47999999999999999999999987 9999997 11 1111111112222222111111122344566678
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccccCCCCCCCCCC---CCEEEecCHHHHHHHHHHHHh
Q 013952 85 GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA---KNIFYLREIDDADKLVEAIKA 159 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~~~~~~ 159 (433)
+++++. ..|..++.+++ .+.+.++.++.||+||+|||+.|..|+ +++.+. ..+++.. ..+. ..
T Consensus 84 ~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~~---i~g~~~~~~~~~~~~~-~~~~-------~~ 151 (323)
T 3f8d_A 84 EVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKLG---VPGEQEFAGRGISYCS-VADA-------PL 151 (323)
T ss_dssp TCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCCC---CTTTTTTBTTTEESCH-HHHG-------GG
T ss_pred CCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccCC---CCchhhhcCCceEEec-cCCH-------hH
Confidence 999999 79999987754 567777789999999999999988776 455443 4444321 1111 12
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013952 160 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 239 (433)
Q Consensus 160 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 239 (433)
..+++++|+|+|.+++|+|..|.+.|.+|+++++.+.+.+ ++++ +.+.+++.||++++++++.++.. ++...
T Consensus 152 ~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~---~~~~---~~~~~~~~gv~~~~~~~v~~i~~--~~~~~ 223 (323)
T 3f8d_A 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA---QPIY---VETVKKKPNVEFVLNSVVKEIKG--DKVVK 223 (323)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS---CHHH---HHHHHTCTTEEEECSEEEEEEEE--SSSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc---CHHH---HHHHHhCCCcEEEeCCEEEEEec--cCcee
Confidence 2579999999999999999999999999999999988765 3332 33344456999999999999987 46666
Q ss_pred EEEeCC---Cc--EEECCEEEEcccCccChhhhhc-cccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccc
Q 013952 240 EVKLKD---GR--TLEADIVVVGVGGRPLISLFKG-QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVE 312 (433)
Q Consensus 240 ~v~~~~---g~--~i~~d~vi~a~G~~p~~~~~~~-~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~ 312 (433)
.+.+.+ |+ ++++|.||+++|++|+.++++. ++.. ++|+|.||++++|+.|+|||+|||+..+. ..+
T Consensus 224 ~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~-------~~~ 296 (323)
T 3f8d_A 224 QVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNGYIKVDEWMRTSVPGVFAAGDCTSAWL-------GFR 296 (323)
T ss_dssp EEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTSSBCCCTTCBCSSTTEEECSTTBSTTT-------TCC
T ss_pred EEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCCcEecCCCceecCCCEEEcceecCCCC-------ccc
Confidence 677765 65 7999999999999999887753 5665 67899999999999999999999998641 116
Q ss_pred cHHHHHHHHHHHHHHHhccCC
Q 013952 313 HVDHARKSAEQAVKTIMATEG 333 (433)
Q Consensus 313 ~~~~A~~~g~~aa~~i~~~~~ 333 (433)
.+..|..+|+.||.+|.....
T Consensus 297 ~~~~A~~~g~~aa~~i~~~l~ 317 (323)
T 3f8d_A 297 QVITAVAQGAVAATSAYRYVT 317 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeehhhHHHHHHHHHHHHHH
Confidence 789999999999999986543
No 63
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=4.1e-38 Score=292.43 Aligned_cols=288 Identities=20% Similarity=0.209 Sum_probs=211.0
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccC-CCCCCCCHhHHHh
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVG-SGGERLLPEWYKE 83 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~-~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 83 (433)
+||+|||||++|+++|..|++.|+ + |+|+|++. + .+.+.........+++..... ......+.+.+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~---v~lie~~~-~------gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 71 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKN---AVLFEKGM-P------GGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFR 71 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSS---EEEECSSS-T------TCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHT
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCc---EEEEcCCC-C------CcccccccccccCCCCcccCCHHHHHHHHHHHHHH
Confidence 699999999999999999999998 6 99999971 1 011111111111222211000 0011223445566
Q ss_pred CCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccccCCCCCCCCC---CCCEEEecCHHHHHHHHHHHH
Q 013952 84 KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVEAIK 158 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~~~ 158 (433)
.+++++. ..+..++.+.+ .+.+.+++++.||+||+|||+.|..|+ ++|.+ ...++++......
T Consensus 72 ~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~---~~g~~~~~~~~~~~~~~~~~~-------- 139 (311)
T 2q0l_A 72 FGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTG---IKGESEYWGKGVSTCATCDGF-------- 139 (311)
T ss_dssp TSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCC---CBTHHHHBTTTEESCHHHHGG--------
T ss_pred cCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCC---CCChhhccCCcEEEeecCChh--------
Confidence 7999988 68998887666 566778888999999999999888776 45532 2345443222211
Q ss_pred hcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHH-hcCcEEEcCCeEEEEEecCCCc
Q 013952 159 AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYA-NKGIKIIKGTVAVGFTTNADGE 237 (433)
Q Consensus 159 ~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~-~~GV~v~~~~~v~~i~~~~~g~ 237 (433)
...+++++|||+|++|+|+|..|.+.|.+|+++++.+.+. .++.+ .+.+. +.||++++++.+.++.. +++.
T Consensus 140 ~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~---~~~~~----~~~l~~~~gv~v~~~~~v~~i~~-~~~~ 211 (311)
T 2q0l_A 140 FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR---CAPIT----LEHAKNNDKIEFLTPYVVEEIKG-DASG 211 (311)
T ss_dssp GGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC---SCHHH----HHHHHTCTTEEEETTEEEEEEEE-ETTE
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC---CCHHH----HHHHhhCCCeEEEeCCEEEEEEC-CCCc
Confidence 1257899999999999999999999999999999987763 34443 33344 57999999999999987 2344
Q ss_pred EEEEEeC---CCc--EEECCEEEEcccCccChhhhhcc-----ccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccC
Q 013952 238 VKEVKLK---DGR--TLEADIVVVGVGGRPLISLFKGQ-----VAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYR 306 (433)
Q Consensus 238 ~~~v~~~---~g~--~i~~d~vi~a~G~~p~~~~~~~~-----~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~ 306 (433)
+..+.+. +|+ ++++|.||+|+|++|++++++.. +.. ++|+|.||+++||+.|+|||+|||+..+.
T Consensus 212 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~~---- 287 (311)
T 2q0l_A 212 VSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYGSIVVDFSMKTNVQGLFAAGDIRIFAP---- 287 (311)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECSTTBTTCC----
T ss_pred EeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCCCEEeCCccccCCCCeEEcccccCcch----
Confidence 4456665 565 79999999999999999887543 555 56899999999999999999999998632
Q ss_pred cccccccHHHHHHHHHHHHHHHhccC
Q 013952 307 EMRRVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 307 ~~~~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
+++..|..||+.||.||....
T Consensus 288 -----~~~~~A~~~g~~aa~~i~~~l 308 (311)
T 2q0l_A 288 -----KQVVCAASDGATAALSVISYL 308 (311)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHhHHHHHHHHHHHH
Confidence 578889999999999997643
No 64
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=1.6e-38 Score=298.58 Aligned_cols=299 Identities=21% Similarity=0.210 Sum_probs=218.3
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccc-cCCCCCCCCHhHHH
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVC-VGSGGERLLPEWYK 82 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (433)
.++||+|||||++|+++|.+|++.|++ |+|+|+.. .......+.+........+++++.. ........+...++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~vie~~~--~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIK---PILYEGMM--ANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQST 95 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSS--BTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCC--CCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHH
Confidence 358999999999999999999999987 99999962 0011122222222212222332210 00111233456667
Q ss_pred hCCcEEEeCceEEEEECCCCEEEe-----CCCcEEecceEEEccCCCccccCCCCCCCCC---CCCEEEecCHHHHHHHH
Q 013952 83 EKGIELILSTEIVRADIASKTLLS-----ATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLV 154 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~-----~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~ 154 (433)
+.+++++.++ +..++.+.+.+.+ .++.++.||+||+|||+.|..|+ ++|.+ ...+.+... ..
T Consensus 96 ~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~---~~g~~~~~~~~~~~~~~------~~ 165 (338)
T 3itj_A 96 KFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMH---LPGEETYWQKGISACAV------CD 165 (338)
T ss_dssp HTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCC---CTTHHHHBTTTEESCHH------HH
T ss_pred HcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCC---CCCchhccCccEEEchh------cc
Confidence 7899999986 9999988776544 46678999999999999888776 45532 233433221 11
Q ss_pred HHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHh-cCcEEEcCCeEEEEEec
Q 013952 155 EAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN-KGIKIIKGTVAVGFTTN 233 (433)
Q Consensus 155 ~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~ 233 (433)
..+....+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.+ .+.+.+.+.+ .||++++++.+.++..
T Consensus 166 ~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-------~~~~~~~l~~~~gv~i~~~~~v~~i~~- 237 (338)
T 3itj_A 166 GAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-------STIMQKRAEKNEKIEILYNTVALEAKG- 237 (338)
T ss_dssp TTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------CHHHHHHHHHCTTEEEECSEEEEEEEE-
T ss_pred cchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------CHHHHHHHHhcCCeEEeecceeEEEEc-
Confidence 111122578999999999999999999999999999999887654 2334455555 4999999999999987
Q ss_pred CCCcEEEEEeCC-----CcEEECCEEEEcccCccChhhhhccccc-CCCcEEe-CCCCCCCCCCeEEcCccccccccccC
Q 013952 234 ADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIET-DDFFKTSADDVYAVGDVATFPMKLYR 306 (433)
Q Consensus 234 ~~g~~~~v~~~~-----g~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~v-d~~~~t~~~~vfa~Gd~~~~~~~~~~ 306 (433)
+++.+..|.+.+ ++++++|.||+|+|++|+..++..++.. ++|++.+ |++++|+.|+|||+|||+..+.
T Consensus 238 ~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~---- 313 (338)
T 3itj_A 238 DGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAGQVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKY---- 313 (338)
T ss_dssp SSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBTTBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSC----
T ss_pred ccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhCceEecCCCcEEEcCcccccCCCCEEEeeccCCCCc----
Confidence 345566677765 4679999999999999999988777776 5788884 8889999999999999998432
Q ss_pred cccccccHHHHHHHHHHHHHHHhccCCC
Q 013952 307 EMRRVEHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 307 ~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
+.+..|..+|+.||.+|...+.+
T Consensus 314 -----~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 314 -----RQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----cceeeehhhhHHHHHHHHHHHhc
Confidence 57888999999999999876543
No 65
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=2e-38 Score=293.29 Aligned_cols=283 Identities=14% Similarity=0.113 Sum_probs=197.7
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCC---CCCCCCHh
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGS---GGERLLPE 79 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 79 (433)
|++|||+||||||||++||.+|+++|++ |+|+|++. + .+.+. .+.+++....+. .......+
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~---v~lie~~~-~------gg~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 68 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQ---IALFDNNT-N------RNRVT-----QNSHGFITRDGIKPEEFKEIGLN 68 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSC-C------GGGGS-----SCBCCSTTCTTBCHHHHHHHHHH
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCC-C------CCeee-----eecCCccCCCCCCHHHHHHHHHH
Confidence 4579999999999999999999999987 99999981 0 11111 111111110000 00011112
Q ss_pred HHHhC-CcEEEeCceEEEEECCC---CEEEeCCCcEEecceEEEccCCCccccCCCCCCCCC---CCCEEEecCHHHHHH
Q 013952 80 WYKEK-GIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADK 152 (433)
Q Consensus 80 ~~~~~-~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~ 152 (433)
.+.++ .+.+... .+..+.... .++.+.+++++.||+||||||++|+.|+ +||.+ ...+++.......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~p~---i~G~~~~~~~~v~~~~~~~~~-- 142 (304)
T 4fk1_A 69 EVMKYPSVHYYEK-TVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEFPS---IPNVREYYGKSLFSCPYCDGW-- 142 (304)
T ss_dssp HHTTSTTEEEEEC-CEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEECCS---CTTHHHHBTTTEESCHHHHSG--
T ss_pred HHHhcCCEEEEee-EEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcccccc---ccCccccccceeeeccccchh--
Confidence 22333 4556554 455444322 3678889999999999999999999887 45532 3445543222111
Q ss_pred HHHHHHhcCCCcEEEECCCH-HHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013952 153 LVEAIKAKKNGKAVVVGGGY-IGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 231 (433)
Q Consensus 153 ~~~~~~~~~~~~v~ViG~G~-~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~ 231 (433)
..++++++|||+|. .++|+|..+.+.+.+|+++.+.+.+ . +.+.+.+++.|++++.++ +..+.
T Consensus 143 ------~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~-----~----~~~~~~l~~~g~~~~~~~-v~~~~ 206 (304)
T 4fk1_A 143 ------ELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL-----S----QTIMDELSNKNIPVITES-IRTLQ 206 (304)
T ss_dssp ------GGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC-----C----HHHHHHHHTTTCCEECSC-EEEEE
T ss_pred ------HhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccccc-----h----hhhhhhhhccceeEeeee-EEEee
Confidence 12567888888885 5689999999999999999876543 2 235567888999999764 77776
Q ss_pred ecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh-hccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCccc
Q 013952 232 TNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF-KGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMR 309 (433)
Q Consensus 232 ~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~-~~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~ 309 (433)
. +++++..+++.+|+++++|.+++++|.+|+..++ +.++++ ++|+|.||++||||+|||||+|||++.+.
T Consensus 207 ~-~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~~------- 278 (304)
T 4fk1_A 207 G-EGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNGTFVIDDFGRTSEKNIYLAGETTTQGP------- 278 (304)
T ss_dssp S-GGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTSSSCSSTTCBCSSTTEEECSHHHHTSC-------
T ss_pred c-CCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCCCEEECcCCccCCCCEEEEeccCCCcc-------
Confidence 5 4567778999999999999888877766555444 567777 67889999999999999999999997543
Q ss_pred ccccHHHHHHHHHHHHHHHhccC
Q 013952 310 RVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 310 ~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
.++..|..+|+.||.+|...+
T Consensus 279 --~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 279 --SSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHHHHHHH
Confidence 467889999999999986543
No 66
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=8e-38 Score=290.90 Aligned_cols=290 Identities=20% Similarity=0.178 Sum_probs=211.9
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEE-EcCCCCCCCCCCccccccCCCCCCCCCCcccc-cCCCCCCCCHhHH
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAI-ISKEVAPYERPALSKAYLFPEGTARLPGFHVC-VGSGGERLLPEWY 81 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~l-ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 81 (433)
.++||+|||||+||++||.+|++.|++ |+| +|+.. + .+.+.........|++... ........+...+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~li~e~~~-~------gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLK---NVVMFEKGM-P------GGQITSSSEIENYPGVAQVMDGISFMAPWSEQC 72 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCS---CEEEECSSS-T------TGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCC---eEEEEeCCC-C------CceeeeeceeccCCCCCCCCCHHHHHHHHHHHH
Confidence 458999999999999999999999987 888 99861 1 1111111122222332210 0001122344556
Q ss_pred HhCCcEEEeCceEEEEECCC--CEEE--eCCCcEEecceEEEccCCCccccCCCCCCCCCC---CCEEEecCHHHHHHHH
Q 013952 82 KEKGIELILSTEIVRADIAS--KTLL--SATGLIFKYQILVIATGSTVLRLTDFGVEGADA---KNIFYLREIDDADKLV 154 (433)
Q Consensus 82 ~~~~v~~~~~~~v~~i~~~~--~~v~--~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~---~~v~~~~~~~~~~~~~ 154 (433)
++.+++++.+ .+..+ ++. +.+. +.++.++.||+||+|||+.|..|+ ++|.+. ..+++.......
T Consensus 73 ~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~---~~g~~~~~~~~~~~~~~~~~~---- 143 (315)
T 3r9u_A 73 MRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAPKKAG---FKGEDEFFGKGVSTCATCDGF---- 143 (315)
T ss_dssp TTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEECCCC---CBTTTTTBTTTEESCHHHHGG----
T ss_pred HHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCCCCCC---CCChhhcCCCeEEeeeccccc----
Confidence 6789999987 88888 444 3333 433338999999999999888777 455432 444433221111
Q ss_pred HHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC
Q 013952 155 EAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 234 (433)
Q Consensus 155 ~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~ 234 (433)
...+++++|+|+|++++|+|..|.+.+.+|+++++.+.+. .++++ +.+.+++.||++++++.+.++.. +
T Consensus 144 ----~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~---~~~~~---~~~~~~~~gv~~~~~~~v~~i~~-~ 212 (315)
T 3r9u_A 144 ----FYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR---AAPST---VEKVKKNEKIELITSASVDEVYG-D 212 (315)
T ss_dssp ----GGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB---SCHHH---HHHHHHCTTEEEECSCEEEEEEE-E
T ss_pred ----ccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC---CCHHH---HHHHHhcCCeEEEeCcEEEEEEc-C
Confidence 1257999999999999999999999999999999988763 24443 34555789999999999999987 3
Q ss_pred CCcEEEEEeC--CCc--EEECCEEEEcccCccChhhhhc-----cccc-CCCcEEeCCCCCCCCCCeEEcCccccccccc
Q 013952 235 DGEVKEVKLK--DGR--TLEADIVVVGVGGRPLISLFKG-----QVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKL 304 (433)
Q Consensus 235 ~g~~~~v~~~--~g~--~i~~d~vi~a~G~~p~~~~~~~-----~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~ 304 (433)
++++..+.+. +|+ ++++|.||+|+|++|+..++.. ++.. ++|+|.||+++||+.|+|||+|||+..+.
T Consensus 213 ~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g~i~vd~~~~t~~~~v~a~GD~~~~~~-- 290 (315)
T 3r9u_A 213 KMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLKMQTSVAGLFAAGDLRKDAP-- 290 (315)
T ss_dssp TTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTSCBCCCTTCBCSSTTEEECGGGBTTCC--
T ss_pred CCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCCcEEeCCCcccCCCCEEEeecccCCch--
Confidence 4455566665 775 7999999999999999998865 4666 56899999999999999999999986432
Q ss_pred cCcccccccHHHHHHHHHHHHHHHhccC
Q 013952 305 YREMRRVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 305 ~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
+.+..|..+|+.||.+|....
T Consensus 291 -------~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 291 -------KQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHH
T ss_pred -------hhhhhHHhhHHHHHHHHHHHH
Confidence 678899999999999998653
No 67
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=2.1e-37 Score=300.65 Aligned_cols=315 Identities=17% Similarity=0.175 Sum_probs=231.7
Q ss_pred CcCeEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHh
Q 013952 4 KSFKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPE 79 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~---~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (433)
.++||||||||++|+++|.+|++ .+.+ |+|||++ ...|. +.... +... ... .......+.+
T Consensus 3 ~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~---Vtlie~~~~~~~~-~~~~~-~~~g----~~~------~~~~~~~l~~ 67 (437)
T 3sx6_A 3 GSAHVVILGAGTGGMPAAYEMKEALGSGHE---VTLISANDYFQFV-PSNPW-VGVG----WKE------RDDIAFPIRH 67 (437)
T ss_dssp TSCEEEEECCSTTHHHHHHHHHHHHGGGSE---EEEECSSSEEECG-GGHHH-HHHT----SSC------HHHHEEECHH
T ss_pred CCCcEEEECCcHHHHHHHHHHhccCCCcCE---EEEEeCCCCCccc-CCccc-cccC----ccC------HHHHHHHHHH
Confidence 45799999999999999999999 6665 9999999 33221 11110 0000 000 0011235677
Q ss_pred HHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCC--CCEEEecCHHHHHHHHHHH
Q 013952 80 WYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA--KNIFYLREIDDADKLVEAI 157 (433)
Q Consensus 80 ~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~ 157 (433)
++++.+++++.+ .+..++++.++|.+.+++++.||+||+|||++|..++ +||.+. ...+...+..++..+.+.+
T Consensus 68 ~~~~~gv~~~~~-~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~~---ipG~~~~~~~~~~~~~~~~a~~~~~~~ 143 (437)
T 3sx6_A 68 YVERKGIHFIAQ-SAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFEN---VPGSDPHEGPVQSICTVDHAERAFAEY 143 (437)
T ss_dssp HHHTTTCEEECS-CEEEEETTTTEEEETTSCEEECSEEEECCCCEECGGG---STTCSTTTSSEECCSSHHHHHHHHHHH
T ss_pred HHHHCCCEEEEe-EEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCccc---CCCCCcccCcceecccccHHHHHHHHH
Confidence 788899999874 9999999999999999989999999999999998777 566553 3667778888888877766
Q ss_pred Hhc-CCCcEEEECCCHH----H--HHHH----HHHHhCCCe-----EEEEccCCccCCCCC--CHHHHHHHHHHHHhcCc
Q 013952 158 KAK-KNGKAVVVGGGYI----G--LELS----AALKINNID-----VSMVYPEPWCMPRLF--TADIAAFYEGYYANKGI 219 (433)
Q Consensus 158 ~~~-~~~~v~ViG~G~~----g--~e~a----~~l~~~g~~-----V~li~~~~~~~~~~~--~~~~~~~l~~~l~~~GV 219 (433)
+.. ..++++|||+|+. | +|+| ..+.+.|.+ |+++++.+.+.+..+ .++..+.+.+.+++.||
T Consensus 144 ~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~~~gI 223 (437)
T 3sx6_A 144 QALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGI 223 (437)
T ss_dssp HHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHHHTTC
T ss_pred HHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHHHCCC
Confidence 532 2446788888543 4 7777 666777864 999999887632111 13578889999999999
Q ss_pred EEEcCCeEEEEEecCCCcEEEEEeCC-----CcEEECCEEEEcccCccChhhhh-cccccCCCcEEeCCCCCC-CCCCeE
Q 013952 220 KIIKGTVAVGFTTNADGEVKEVKLKD-----GRTLEADIVVVGVGGRPLISLFK-GQVAENKGGIETDDFFKT-SADDVY 292 (433)
Q Consensus 220 ~v~~~~~v~~i~~~~~g~~~~v~~~~-----g~~i~~d~vi~a~G~~p~~~~~~-~~~~~~~g~i~vd~~~~t-~~~~vf 292 (433)
+++++++|++++. ++........+ ++++++|.+++++|++|+..+.+ .++..++|+|.||++||| ++||||
T Consensus 224 ~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl~~~~G~i~Vd~~l~t~~~~~If 301 (437)
T 3sx6_A 224 EAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIF 301 (437)
T ss_dssp EEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTTBCTTSCBCBCTTSBBSSCTTEE
T ss_pred EEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccccCCCCcEEeChhccCCCCCCEE
Confidence 9999999999975 33211111223 46799999999999998877664 355457889999999999 999999
Q ss_pred EcCccccccccccCccc---ccccHHHHHHHHHHHHHHHhccCCCCCccCC
Q 013952 293 AVGDVATFPMKLYREMR---RVEHVDHARKSAEQAVKTIMATEGGKTVTGY 340 (433)
Q Consensus 293 a~Gd~~~~~~~~~~~~~---~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~ 340 (433)
|+|||+..+... +.+. .++++..|..||+.+|+||.....++++.+|
T Consensus 302 a~GD~~~~~~~~-~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~~ 351 (437)
T 3sx6_A 302 AAGIAIAIPPVE-TTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQT 351 (437)
T ss_dssp ECGGGBCCCCSC-CCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCCC
T ss_pred EEEEEeccCCcC-CCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 999999876421 1111 1268899999999999999988877655543
No 68
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=6e-38 Score=294.19 Aligned_cols=302 Identities=19% Similarity=0.200 Sum_probs=213.8
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCccccc-CCCCCCCCH
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLP 78 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 78 (433)
|++.++||+|||||++|+++|..|++.|++ |+|+|+. ... ....+.+.........+.+.... .......+.
T Consensus 4 ~~~~~~~vvIIG~G~aGl~~A~~l~~~g~~---v~lie~~~~~~---~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 77 (333)
T 1vdc_A 4 LETHNTRLCIVGSGPAAHTAAIYAARAELK---PLLFEGWMAND---IAPGGQLTTTTDVENFPGFPEGILGVELTDKFR 77 (333)
T ss_dssp CEEEEEEEEEECCSHHHHHHHHHHHHTTCC---CEEECCSSBTT---BCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHH
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeccCccc---cCCCceeeeccccccCCCCccCCCHHHHHHHHH
Confidence 334468999999999999999999999987 9999983 100 01111111111111222221100 001112334
Q ss_pred hHHHhCCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccccCCCCCCCCCC-------CCEEEecCHHH
Q 013952 79 EWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA-------KNIFYLREIDD 149 (433)
Q Consensus 79 ~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~-------~~v~~~~~~~~ 149 (433)
+.+.+.+++++.++ +..++.+.+ +|.+ ++.+++||+||+|||+.|..|+ +++.+. ..++.+...
T Consensus 78 ~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~-- 150 (333)
T 1vdc_A 78 KQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLS---FVGSGEVLGGFWNRGISACAVC-- 150 (333)
T ss_dssp HHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCC---CBTCSSSSSCCBTTTEESCHHH--
T ss_pred HHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCC---CCCccccccccccCcEEEeccC--
Confidence 55667899999985 888987665 5666 6778999999999999988776 455432 233322111
Q ss_pred HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 150 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 150 ~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
...+....+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+. .+.+++.||++++++++.+
T Consensus 151 ----~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~---~~~~~---~~~~~~~gv~i~~~~~v~~ 220 (333)
T 1vdc_A 151 ----DGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA---SKIMQ---QRALSNPKIDVIWNSSVVE 220 (333)
T ss_dssp ----HTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS---CHHHH---HHHHTCTTEEEECSEEEEE
T ss_pred ----ccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc---cHHHH---HHHHhCCCeeEecCCceEE
Confidence 1111112578999999999999999999999999999999876542 33322 2445788999999999999
Q ss_pred EEecCCC-cEEEEEeC---CC--cEEECCEEEEcccCccChhhhhccccc-CCCcEEeCCC-CCCCCCCeEEcCcccccc
Q 013952 230 FTTNADG-EVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF-FKTSADDVYAVGDVATFP 301 (433)
Q Consensus 230 i~~~~~g-~~~~v~~~---~g--~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~-~~t~~~~vfa~Gd~~~~~ 301 (433)
+..++++ ++..+.+. +| +++++|.||+|+|++|+..+++.++.. ++|+|.||++ ++|+.|+|||+|||+..+
T Consensus 221 i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~ 300 (333)
T 1vdc_A 221 AYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKK 300 (333)
T ss_dssp EEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSS
T ss_pred EeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhhccccccCCCCEEechhhcccCCCCEEEeeeccCCC
Confidence 9873221 55556654 44 579999999999999999988766665 4789999997 689999999999999865
Q ss_pred ccccCcccccccHHHHHHHHHHHHHHHhccCCC
Q 013952 302 MKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 302 ~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
. ..+..|..+|+.||.+|.....+
T Consensus 301 ~---------~~~~~A~~~g~~aa~~i~~~l~~ 324 (333)
T 1vdc_A 301 Y---------RQAITAAGTGCMAALDAEHYLQE 324 (333)
T ss_dssp C---------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred c---------hhHHHHHHhHHHHHHHHHHHHHh
Confidence 2 56888999999999999876543
No 69
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=7.8e-38 Score=302.66 Aligned_cols=308 Identities=17% Similarity=0.160 Sum_probs=220.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
++|||||||+||++||.+|++.+. +.+|+|||++ ...| +|.+..-........ +....+.+++++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~-~~~VtlI~~~~~~~~-~p~l~~v~~g~~~~~-----------~i~~~~~~~~~~~ 69 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMP-DLKITLISDRPYFGF-TPAFPHLAMGWRKFE-----------DISVPLAPLLPKF 69 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCT-TCEEEEECSSSEEEC-GGGHHHHHHTCSCGG-----------GSEEESTTTGGGG
T ss_pred CcEEEECCCHHHHHHHHHHhccCc-CCeEEEEcCCCCCcc-CccHHHHhcCCCCHH-----------HhhhcHHHHHHHC
Confidence 589999999999999999999873 5679999999 4333 333321110000000 1122345667778
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhc-CCC
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK-KNG 163 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-~~~ 163 (433)
+++++.+ +|+.||+++++|++++|++++||+||||||+++. ++ +||.. ++.+.+++.+++.++++.+.+. ..+
T Consensus 70 gv~~i~~-~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~-~~---i~G~~-e~~~~~~~~~~a~~~~~~l~~~~~~~ 143 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV-FG---AEGQE-ENSTSICTAEHALETQKKLQELYANP 143 (430)
T ss_dssp TEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEE-CC---SBTHH-HHSCCCSSHHHHHHHHHHHHHHHHSC
T ss_pred CcEEEEe-EEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc-CC---ccCcc-cCcCCcccHHHHHHHHHHHHhhccCC
Confidence 9999987 8999999999999999999999999999999753 33 56643 3456677888988888777643 234
Q ss_pred cEEEECCCH------HHHHH----HHHHHhCC----CeEEEEccCCccCC--CCCCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013952 164 KAVVVGGGY------IGLEL----SAALKINN----IDVSMVYPEPWCMP--RLFTADIAAFYEGYYANKGIKIIKGTVA 227 (433)
Q Consensus 164 ~v~ViG~G~------~g~e~----a~~l~~~g----~~V~li~~~~~~~~--~~~~~~~~~~l~~~l~~~GV~v~~~~~v 227 (433)
.++|+|++. .+.|+ +..+.+.+ .+|++++..+.+.. ....+...+.+++.++++||++++++.|
T Consensus 144 ~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v 223 (430)
T 3hyw_A 144 GPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAV 223 (430)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEE
T ss_pred ceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceE
Confidence 455555542 23343 44455555 47888887765432 1245677888999999999999999999
Q ss_pred EEEEecCCCcEEEEEeCCC--cEEECCEEEEcccCccChhhhhcccc--c-CCCcEEeCCCCC-CCCCCeEEcCcccccc
Q 013952 228 VGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRPLISLFKGQVA--E-NKGGIETDDFFK-TSADDVYAVGDVATFP 301 (433)
Q Consensus 228 ~~i~~~~~g~~~~v~~~~g--~~i~~d~vi~a~G~~p~~~~~~~~~~--~-~~g~i~vd~~~~-t~~~~vfa~Gd~~~~~ 301 (433)
++++. ++ ..+...+| +++++|.+++++|.+|+..+...+.. . .+|++.||++|| |++|||||+|||+..+
T Consensus 224 ~~v~~--~~--~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p 299 (430)
T 3hyw_A 224 KAIEP--DK--VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIP 299 (430)
T ss_dssp EEECS--SE--EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCC
T ss_pred EEEeC--Cc--eEEEeeCCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecC
Confidence 99964 33 23343343 57999999999999998766655433 3 346799999999 7999999999999877
Q ss_pred ccccCc--ccccccHHHHHHHHHHHHHHHhccCCCCC
Q 013952 302 MKLYRE--MRRVEHVDHARKSAEQAVKTIMATEGGKT 336 (433)
Q Consensus 302 ~~~~~~--~~~~~~~~~A~~~g~~aa~~i~~~~~~~~ 336 (433)
...... ...+++...|.+||+++|+||.....+++
T Consensus 300 ~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~ 336 (430)
T 3hyw_A 300 PIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp CSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 532110 01236788999999999999998877653
No 70
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=5.3e-38 Score=289.63 Aligned_cols=282 Identities=16% Similarity=0.103 Sum_probs=206.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC-
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK- 84 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 84 (433)
+||+|||||++|+++|.+|++.|++ |+|+|++.. ..+ +. .....++.............+.+.+.+.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~~-~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKN---ILLVDAGER-RNR------FA--SHSHGFLGQDGKAPGEIIAEARRQIERYP 70 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECCCC-GGG------GC--SCCCSSTTCTTCCHHHHHHHHHHHHTTCT
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCc-ccc------cc--hhhcCCcCCCCCCHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999987 999998710 000 00 0001111110000000112233444454
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCC
Q 013952 85 GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 162 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 162 (433)
+++++.+ +|..++++++ .|.+.+++++.||+||+|||+.|+.|+.+++.......+++.. ..+. ....+
T Consensus 71 ~v~~~~~-~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~-~~~~-------~~~~~ 141 (297)
T 3fbs_A 71 TIHWVEG-RVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP-YCHG-------YELDQ 141 (297)
T ss_dssp TEEEEES-CEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH-HHHT-------GGGTT
T ss_pred CeEEEEe-EEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc-cCcc-------hhhcC
Confidence 7888775 8999987654 6777888889999999999999887774332222224454332 1111 11258
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK 242 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~ 242 (433)
++++|+|+|++|+|+|..|.+.| +|+++.+.+.. +++ .+.+.+++.||+++. +++.++.. ++ .+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~----~~~----~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~ 206 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE----PDA----DQHALLAARGVRVET-TRIREIAG--HA---DVV 206 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC----CCH----HHHHHHHHTTCEEEC-SCEEEEET--TE---EEE
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC----CCH----HHHHHHHHCCcEEEc-ceeeeeec--CC---eEE
Confidence 99999999999999999999999 99999887652 333 456778899999996 89999975 33 688
Q ss_pred eCCCcEEECCEEEEcccCccChhhhhc-ccccC---CC-cEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHH
Q 013952 243 LKDGRTLEADIVVVGVGGRPLISLFKG-QVAEN---KG-GIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHA 317 (433)
Q Consensus 243 ~~~g~~i~~d~vi~a~G~~p~~~~~~~-~~~~~---~g-~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A 317 (433)
+.+|+++++|.|++++|++|+.++++. ++..+ .| ++.||++++|+.|+|||+|||+..+ +.+..|
T Consensus 207 ~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~~----------~~~~~A 276 (297)
T 3fbs_A 207 LADGRSIALAGLFTQPKLRITVDWIEKLGCAVEEGPMGSTIVTDPMKQTTARGIFACGDVARPA----------GSVALA 276 (297)
T ss_dssp ETTSCEEEESEEEECCEEECCCSCHHHHTCCEEEETTEEEECCCTTCBCSSTTEEECSGGGCTT----------CCHHHH
T ss_pred eCCCCEEEEEEEEEccCcccCchhHHhcCCccccCCCCceEEeCCCCccCCCCEEEEeecCCch----------HHHHHH
Confidence 899999999999999999999887643 45543 35 7999999999999999999999864 678899
Q ss_pred HHHHHHHHHHHhccCC
Q 013952 318 RKSAEQAVKTIMATEG 333 (433)
Q Consensus 318 ~~~g~~aa~~i~~~~~ 333 (433)
..+|+.||.+|.....
T Consensus 277 ~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 277 VGDGAMAGAAAHRSIL 292 (297)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHh
Confidence 9999999999987543
No 71
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=7.7e-37 Score=294.53 Aligned_cols=291 Identities=22% Similarity=0.268 Sum_probs=227.5
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~---~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
+||+|||||++|+++|.+|++ .|.+ |+|||++...+.++....... .... .......+.+.+.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~---V~vie~~~~~~~~~~~~~~~~---~~~~--------~~~~~~~~~~~~~ 67 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKAD---VKVINKSRFSYFRPALPHVAI---GVRD--------VDELKVDLSEALP 67 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSE---EEEEESSSEEEECCSSCCCCS---SCCC--------CCCEEEEHHHHTG
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEeCCCCceeccchhhccc---CCcC--------HHHHHHHHHHHHh
Confidence 489999999999999999999 6766 999999922222222211000 0000 1111234566677
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCCCcE----EecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHH
Q 013952 83 EKGIELILSTEIVRADIASKTLLSATGLI----FKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIK 158 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~----~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~ 158 (433)
+.+++++.+ .|..++++.+.|.+.++.. +.||+||+|||+.|..|+ ++|.+. ..++..+..++..+.+.+.
T Consensus 68 ~~gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~---ipG~~~-~~~~~~~~~~~~~~~~~l~ 142 (409)
T 3h8l_A 68 EKGIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATEL---VKGWDK-YGYSVCEPEFATKLREKLE 142 (409)
T ss_dssp GGTCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGG---SBTHHH-HCEESSSTTHHHHHHHHHH
T ss_pred hCCeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccC---CCChhh-cCcCcCCHHHHHHHHHHHH
Confidence 889999987 9999999999998877753 999999999999988776 466442 4566778888888888887
Q ss_pred hcCCCcEEEECCCH-------------------------HHHHHH----HHHHhCCC----eEEEEccCCccCCCCCCHH
Q 013952 159 AKKNGKAVVVGGGY-------------------------IGLELS----AALKINNI----DVSMVYPEPWCMPRLFTAD 205 (433)
Q Consensus 159 ~~~~~~v~ViG~G~-------------------------~g~e~a----~~l~~~g~----~V~li~~~~~~~~~~~~~~ 205 (433)
... ++++|||+|+ .++|+| ..+.+.|. +|+++++.+ .++. ++++
T Consensus 143 ~~~-~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~-~l~~-~~~~ 219 (409)
T 3h8l_A 143 SFQ-GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGE-YLSD-LSPN 219 (409)
T ss_dssp HCC-SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSS-SSTT-BCHH
T ss_pred Hhc-CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCc-cccc-cCHH
Confidence 654 5667899992 466666 55667774 899999988 5554 7899
Q ss_pred HHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc--ccccCCCcEEeCCC
Q 013952 206 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG--QVAENKGGIETDDF 283 (433)
Q Consensus 206 ~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~--~~~~~~g~i~vd~~ 283 (433)
+.+.+.+.+++.||+++++++|++++. + .+.+.+|+++++|.+|+++|++|+..+... ++..++|++.||++
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~--~----~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~~~~l~~~~G~i~vd~~ 293 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIRE--H----EIVDEKGNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDLN 293 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECS--S----EEEETTSCEEECSEEEEECCEECCHHHHTSCGGGSCTTSCBCBBTT
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECC--C----eEEECCCCEEeeeEEEECCCCCccHHHHhccccCcCCCCCEEeCcc
Confidence 999999999999999999999999975 2 378889999999999999999999755555 44446788999999
Q ss_pred CCC-CCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccC
Q 013952 284 FKT-SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 284 ~~t-~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
+|| +.|||||+|||+..+.+ +.+..|..||+++|+||.+..
T Consensus 294 ~~~~~~~~vfa~GD~~~~~~~--------~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 294 MVSIKYDNVYAVGDANSMTVP--------KLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SBBSSCTTEEECGGGBTTCCS--------CCHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCEEEeehhccCCCC--------cHHHHHHHHHHHHHHHHHHHh
Confidence 999 99999999999986544 678889999999999999876
No 72
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=6e-37 Score=302.93 Aligned_cols=292 Identities=20% Similarity=0.249 Sum_probs=217.0
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
..+||+|||||+||+++|.+|++.|++ |+|+|+. ...+ .......+++......+......+...++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~---v~lie~~~GG~~---------~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIR---TGLMGERFGGQV---------LDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSTTGGG---------TTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCe---EEEEECCCCCcc---------cccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 368999999999999999999999987 9999876 1111 10000111111111000111123445566
Q ss_pred hCCcEEEeCceEEEEECC-----CCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHH
Q 013952 83 EKGIELILSTEIVRADIA-----SKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 157 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~-----~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 157 (433)
+.+++++.++.|..++++ ...|.+.++.++.||++|+|||+.|+.|+.++........++++......
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~------- 351 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGP------- 351 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGG-------
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchh-------
Confidence 789999999999999864 34677888889999999999999988777433322223456544332211
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCC
Q 013952 158 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADG 236 (433)
Q Consensus 158 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~~g 236 (433)
...+++++|||+|++|+|+|..|++.+.+|+++++.+.+.. + ..+.+.+++ .||++++++.++++.. +++
T Consensus 352 -~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~---~----~~l~~~l~~~~gV~v~~~~~v~~i~~-~~~ 422 (521)
T 1hyu_A 352 -LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---D----QVLQDKVRSLKNVDIILNAQTTEVKG-DGS 422 (521)
T ss_dssp -GGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS---C----HHHHHHHTTCTTEEEECSEEEEEEEE-CSS
T ss_pred -hcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc---C----HHHHHHHhcCCCcEEEeCCEEEEEEc-CCC
Confidence 12588999999999999999999999999999999887653 3 334556666 6999999999999987 345
Q ss_pred cEEEEEeCC---Cc--EEECCEEEEcccCccChhhhhccccc-CCCcEEeCCCCCCCCCCeEEcCccccccccccCcccc
Q 013952 237 EVKEVKLKD---GR--TLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 310 (433)
Q Consensus 237 ~~~~v~~~~---g~--~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~ 310 (433)
++..+.+.+ |+ ++++|.|++++|++||++++...+.. .+|+|.||+++||+.|+|||+|||+..+.
T Consensus 423 ~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~~l~~~~~G~I~Vd~~~~ts~p~VfA~GD~~~~~~-------- 494 (521)
T 1hyu_A 423 KVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALERNRMGEIIIDAKCETSVKGVFAAGDCTTVPY-------- 494 (521)
T ss_dssp SEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTTTSCBCTTSCBCCCTTCBCSSTTEEECSTTBCCSS--------
T ss_pred cEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhhhhccCCCCcEEeCCCCCCCCCCEEEeecccCCCc--------
Confidence 665666643 53 68999999999999999888765655 57899999999999999999999998753
Q ss_pred cccHHHHHHHHHHHHHHHhccC
Q 013952 311 VEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 311 ~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
+.+..|+.+|+.||.+|...+
T Consensus 495 -~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 495 -KQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHH
T ss_pred -ceeeehHHhHHHHHHHHHHHH
Confidence 568889999999999997643
No 73
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.4e-37 Score=288.41 Aligned_cols=292 Identities=18% Similarity=0.211 Sum_probs=210.5
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCccccc-CCCCCCCCHhHH
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCV-GSGGERLLPEWY 81 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 81 (433)
+.++||+|||||++|+++|..|++.|++ |+|+|+.. ..+.+.........+++.... .......+.+++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~-------~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 81 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLA---PLVFEGTS-------FGGALMTTTDVENYPGFRNGITGPELMDEMREQA 81 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCC---CEEECCSS-------CSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCe---EEEEecCC-------CCCceeccchhhhcCCCCCCCCHHHHHHHHHHHH
Confidence 3468999999999999999999999987 99999761 011111111112222221100 001112334556
Q ss_pred HhCCcEEEeCceEEEEECCC-CEE-EeCCCcEEecceEEEccCCCccccCCCCCCCCC---CCCEEEecCHHHHHHHHHH
Q 013952 82 KEKGIELILSTEIVRADIAS-KTL-LSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVEA 156 (433)
Q Consensus 82 ~~~~v~~~~~~~v~~i~~~~-~~v-~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~ 156 (433)
.+.+++++.++ +..++..+ ..| .+.+++++.||+||+|||+.|..|+ ++|.+ ...++.+....+.
T Consensus 82 ~~~~v~~~~~~-v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~~---i~g~~~~~~~~~~~~~~~~~~------ 151 (335)
T 2a87_A 82 LRFGADLRMED-VESVSLHGPLKSVVTADGQTHRARAVILAMGAAARYLQ---VPGEQELLGRGVSSCATCDGF------ 151 (335)
T ss_dssp HHTTCEEECCC-EEEEECSSSSEEEEETTSCEEEEEEEEECCCEEECCCC---CTHHHHTBTTTEESCHHHHGG------
T ss_pred HHcCCEEEEee-EEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCccCCC---CCchHhccCCceEEeeccchh------
Confidence 67899999985 88888732 356 6777888999999999999888776 45432 2344433222111
Q ss_pred HHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCC
Q 013952 157 IKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADG 236 (433)
Q Consensus 157 ~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g 236 (433)
+ ..+++++|||+|.+|+|+|..|.+.|.+|+++++.+.+.. .+.+. .+.+++.||++++++++.++.. ++
T Consensus 152 ~--~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~---~~~~~---~~~~~~~gV~v~~~~~v~~i~~--~~ 221 (335)
T 2a87_A 152 F--FRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA---SKIML---DRARNNDKIRFLTNHTVVAVDG--DT 221 (335)
T ss_dssp G--GTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS---CTTHH---HHHHHCTTEEEECSEEEEEEEC--SS
T ss_pred h--cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc---cHHHH---HHHhccCCcEEEeCceeEEEec--CC
Confidence 1 2579999999999999999999999999999999877643 22222 2445779999999999999986 33
Q ss_pred cEEEEEeC---CC--cEEECCEEEEcccCccChhhhhccccc-CCCcEEeCCC-CCCCCCCeEEcCccccccccccCccc
Q 013952 237 EVKEVKLK---DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDF-FKTSADDVYAVGDVATFPMKLYREMR 309 (433)
Q Consensus 237 ~~~~v~~~---~g--~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~-~~t~~~~vfa~Gd~~~~~~~~~~~~~ 309 (433)
.+..+.+. +| +++++|.||+|+|++|++++++.++.. ++|+|.||++ ++|+.|+|||+|||+..+.
T Consensus 222 ~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~------- 294 (335)
T 2a87_A 222 TVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTY------- 294 (335)
T ss_dssp SCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTBTTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSC-------
T ss_pred cEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhhcccccCCCccEEeCCCCCccCCCCEEEeeecCCccH-------
Confidence 33345443 34 579999999999999999888766666 5789999986 6899999999999998642
Q ss_pred ccccHHHHHHHHHHHHHHHhccCC
Q 013952 310 RVEHVDHARKSAEQAVKTIMATEG 333 (433)
Q Consensus 310 ~~~~~~~A~~~g~~aa~~i~~~~~ 333 (433)
..+..|..+|+.||.+|.....
T Consensus 295 --~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 295 --RQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhHHHHHHHHHHHhh
Confidence 5678899999999999986543
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=8.7e-36 Score=282.04 Aligned_cols=299 Identities=17% Similarity=0.259 Sum_probs=200.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCC---CCCCCccccccCCCCCCCCCCcccccCC-------CCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAP---YERPALSKAYLFPEGTARLPGFHVCVGS-------GGE 74 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 74 (433)
++||+|||||++|+++|.+|+++|++ |+|+|++..+ |........+..+.....++++...... ...
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~---v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLS---YVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVL 79 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCC---EEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHH
Confidence 68999999999999999999999987 9999998211 1100000001111111112221111000 011
Q ss_pred CCCHhHHHhCCcEEEeCceEEEEECCCCE---EEeCCCcEEecceEEEccCC--CccccCCCCCCCCCC--CCEEEecCH
Q 013952 75 RLLPEWYKEKGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGS--TVLRLTDFGVEGADA--KNIFYLREI 147 (433)
Q Consensus 75 ~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~--~~~~~~~~~~~g~~~--~~v~~~~~~ 147 (433)
..+.+.+++.+++++.++.|..++.+++. |.+.++ +++||+||+|||. .|..|+ ++|... ...++....
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~~~~~---~~g~~~~~~~~~~~~~~ 155 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEAYTPE---YQGLESFAGIQLHSAHY 155 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGBCCCC---CTTGGGCCSEEEEGGGC
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCCCCCC---CCCccccCCcEEEeccC
Confidence 22334456689999999999999987775 556666 8999999999995 555566 454321 123333222
Q ss_pred HHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC-CccCCCCC-CHHHHHHHHHHHH----------
Q 013952 148 DDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE-PWCMPRLF-TADIAAFYEGYYA---------- 215 (433)
Q Consensus 148 ~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~-~~~~~~~~-~~~~~~~l~~~l~---------- 215 (433)
.+... ..+++++|||+|.+|+|+|..|.+.+ +|+++.+. +.+++... ...+.+.+.+.++
T Consensus 156 ~~~~~-------~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (357)
T 4a9w_A 156 STPAP-------FAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDL 227 (357)
T ss_dssp CCSGG-------GTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------------
T ss_pred CChhh-------cCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCc
Confidence 22111 15789999999999999999999998 69999887 45555422 3444433333332
Q ss_pred ------------------hcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc-ccccCCC
Q 013952 216 ------------------NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAENKG 276 (433)
Q Consensus 216 ------------------~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~-~~~~~~g 276 (433)
+.|+ +.....+.++.. ..+.+.+|+++++|.||+|+|++|+++++.. ++..++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~------~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~G 300 (357)
T 4a9w_A 228 PPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSP------TGMQWADGTERAFDAVIWCTGFRPALSHLKGLDLVTPQG 300 (357)
T ss_dssp ------CBCCCHHHHHHHHTTC-CCEECCCSEEET------TEEECTTSCEEECSEEEECCCBCCCCGGGTTTTCBCTTS
T ss_pred ccccccCcccChhHHHHHhcCc-eEEecCcceEeC------CeeEECCCCEecCCEEEECCCcCCCCcccCcccccCCCC
Confidence 3444 445566666654 2478899999999999999999999888754 5666778
Q ss_pred cEEeCCC--CCCCCCCeEEcC--ccccccccccCcccccccHHHHHHHHHHHHHHHhccCCC
Q 013952 277 GIETDDF--FKTSADDVYAVG--DVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 277 ~i~vd~~--~~t~~~~vfa~G--d~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
+|.||++ ++|+.|+|||+| ||+... . ..+..|..+|+.+|.+|...+.+
T Consensus 301 ~i~vd~~~l~~t~~~~vya~Gd~d~~~~~-~--------~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 301 QVEVDGSGLRALAVPSVWLLGYGDWNGMA-S--------ATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp CBCBCTTSCBBSSCTTEEECSSCGGGSTT-C--------SSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CccccCCcccCCCCCCeEEeccccccccc-h--------hhhhhhHHHHHHHHHHHHHHHHh
Confidence 9999999 999999999999 555522 1 44556889999999999987654
No 75
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=3.2e-35 Score=284.74 Aligned_cols=303 Identities=17% Similarity=0.173 Sum_probs=217.8
Q ss_pred CeEEEECCCHHHHHHHHHHHH--cCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 6 FKYVILGGGVSAGYAAREFAK--QGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~--~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
+||+|||||++|+++|.+|++ .|++ |+|||++ ...| .+............ ......+.+.++
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~---Vtlie~~~~~~~-~~~~~~~~~g~~~~-----------~~~~~~~~~~~~ 67 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLK---ITLISDRPYFGF-TPAFPHLAMGWRKF-----------EDISVPLAPLLP 67 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCE---EEEECSSSEEEC-GGGHHHHHHTCSCG-----------GGSEEESTTTGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCe---EEEECCCCCCCc-CCCcchhccCccCH-----------HHHHHHHHHHHH
Confidence 699999999999999999999 4554 9999999 3222 11111000000000 011234556677
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhc-C
Q 013952 83 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAK-K 161 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~-~ 161 (433)
+.+++++.+ .+..++++.+.|.+.+++++.||+||+|||+.+..|. +.. . .......+..++..+.+.++.. +
T Consensus 68 ~~gv~~~~~-~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~pg---~~~-~-g~~~~~~~~~~a~~~~~~~~~~~~ 141 (430)
T 3h28_A 68 KFNIEFINE-KAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFGA---EGQ-E-ENSTSICTAEHALETQKKLQELYA 141 (430)
T ss_dssp GGTEEEECS-CEEEEETTTTEEEETTCCEEECSEEEECCCCEEECCS---BTH-H-HHSCCCSSHHHHHHHHHHHHHHHH
T ss_pred hcCCEEEEE-EEEEEECCCCEEEECCCcEEECCEEEEcCCcccccCC---CCC-c-CCccCcCCHHHHHHHHHHHHHHHh
Confidence 789999985 8999999999999999989999999999999876542 211 0 1123345677777666655432 2
Q ss_pred CCcEEEECCCHHH------HHHH----HHHHhCC----CeEEEEccCCccCCCC--CCHHHHHHHHHHHHhcCcEEEcCC
Q 013952 162 NGKAVVVGGGYIG------LELS----AALKINN----IDVSMVYPEPWCMPRL--FTADIAAFYEGYYANKGIKIIKGT 225 (433)
Q Consensus 162 ~~~v~ViG~G~~g------~e~a----~~l~~~g----~~V~li~~~~~~~~~~--~~~~~~~~l~~~l~~~GV~v~~~~ 225 (433)
.++++|||+|+.+ +|+| ..+.+.| .+|+++++.+.+.... ..++..+.+.+.+++.||++++++
T Consensus 142 ~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i~~~~ 221 (430)
T 3h28_A 142 NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANV 221 (430)
T ss_dssp SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSC
T ss_pred cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEEEeCC
Confidence 3466888887543 7777 5556677 4899999887663210 123578889999999999999999
Q ss_pred eEEEEEecCCCcEEEEEeCC----CcEEECCEEEEcccCccChhhhh--cccccCCC-cEEeCCCCCC-CCCCeEEcCcc
Q 013952 226 VAVGFTTNADGEVKEVKLKD----GRTLEADIVVVGVGGRPLISLFK--GQVAENKG-GIETDDFFKT-SADDVYAVGDV 297 (433)
Q Consensus 226 ~v~~i~~~~~g~~~~v~~~~----g~~i~~d~vi~a~G~~p~~~~~~--~~~~~~~g-~i~vd~~~~t-~~~~vfa~Gd~ 297 (433)
.|++++. ++ +.+.+ ++++++|.+++++|++|+..+.. .++..++| +|.||+++|| ++|||||+|||
T Consensus 222 ~v~~v~~--~~----v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~ 295 (430)
T 3h28_A 222 AVKAIEP--DK----VIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVV 295 (430)
T ss_dssp EEEEECS--SE----EEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTT
T ss_pred EEEEEeC--Ce----EEEEecCCCceEEeeeEEEECCCCccchhHhhccccCcCCCCCEEecCccccCCCCCCEEEEEee
Confidence 9999965 32 34444 67899999999999999876665 35644678 8999999999 99999999999
Q ss_pred ccccccccCccc---ccccHHHHHHHHHHHHHHHhccCCCCC
Q 013952 298 ATFPMKLYREMR---RVEHVDHARKSAEQAVKTIMATEGGKT 336 (433)
Q Consensus 298 ~~~~~~~~~~~~---~~~~~~~A~~~g~~aa~~i~~~~~~~~ 336 (433)
+..+.. .+.+. .++++..|..||+.+|+||.....+++
T Consensus 296 ~~~~~~-~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 296 TAIPPI-EKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp BCCCCS-SCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eccCCc-cCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 987642 11111 126889999999999999998877653
No 76
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=7.4e-35 Score=277.10 Aligned_cols=302 Identities=14% Similarity=0.151 Sum_probs=207.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEcCCC-C-CCCC-CCccccccCCCCCCCCCCc---c---cc------
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKEV-A-PYER-PALSKAYLFPEGTARLPGF---H---VC------ 68 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~-~~~~V~lie~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~---~---~~------ 68 (433)
++||+|||||++|+++|.+|++.|+ + |+|||++. . .+.. +.. ..++.+.......++ . ..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~---v~lie~~~~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 79 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITD---VIILEKGTVGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFT 79 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCC---EEEECSSSTTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCc---EEEEecCCCCCccccCccc-ccccCcchhcccCCchhhhhcccccccccc
Confidence 6899999999999999999999987 5 99999982 0 0000 000 000000000000000 0 00
Q ss_pred cCCC------CCCCCHhHHHhCCcEEEeCceEEEEECCC--CEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCC
Q 013952 69 VGSG------GERLLPEWYKEKGIELILSTEIVRADIAS--KTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKN 140 (433)
Q Consensus 69 ~~~~------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~ 140 (433)
.... ....+...+++.+++++.++.|..+++++ ..|.+.++ ++.||+||+|||+.+. |. +|+ ..
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~-p~---ip~---~~ 151 (369)
T 3d1c_A 80 FNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF-PK---KPF---KY 151 (369)
T ss_dssp HCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS-BC---CCS---SS
T ss_pred ccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc-cC---CCC---Cc
Confidence 0000 00112334466899999998999998764 35666665 6999999999999765 43 444 23
Q ss_pred EEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC------CCCHHHHHHHHHHH
Q 013952 141 IFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------LFTADIAAFYEGYY 214 (433)
Q Consensus 141 v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~------~~~~~~~~~l~~~l 214 (433)
+++...+.+.. ..++++++|||+|.+|+|+|..|.+.|.+|+++++.+.+++. .+++.+.+.+.+.+
T Consensus 152 ~~~~~~~~~~~-------~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l 224 (369)
T 3d1c_A 152 GIHYSEIEDFD-------NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVI 224 (369)
T ss_dssp CEEGGGCSCGG-------GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTTSCCHHHHHHHHHHH
T ss_pred eechhhcCChh-------hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCccCCHHHHHHHHHHH
Confidence 44443332221 225679999999999999999999999999999998876632 14577888999999
Q ss_pred HhcC-cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE-CCEEEEcccCccChhhhhc-ccccCCCcEEeCCC-CCCCCCC
Q 013952 215 ANKG-IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVGGRPLISLFKG-QVAENKGGIETDDF-FKTSADD 290 (433)
Q Consensus 215 ~~~G-V~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~-~d~vi~a~G~~p~~~~~~~-~~~~~~g~i~vd~~-~~t~~~~ 290 (433)
++.| |++++++.|.++..+ + ....+.+.+|+++. +|.+|+|+|++|+.+++.. .+..++|++.||++ ++|+.|+
T Consensus 225 ~~~g~v~~~~~~~v~~i~~~-~-~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~~~~~~g~i~v~~~~~~t~~~~ 302 (369)
T 3d1c_A 225 KQGARIEMNVHYTVKDIDFN-N-GQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTNQDIKLTTHDESTRYPN 302 (369)
T ss_dssp HTTCCEEEECSCCEEEEEEE-T-TEEEEEESSSCCEEESSCCEECCCBCGGGSHHHHHHSCCTTSCCCBCTTSBBSSSTT
T ss_pred hhCCcEEEecCcEEEEEEec-C-CceEEEecCCeEeccCCceEEeeccCCccchhhhhhccCCCCCEEechhhcccCCCC
Confidence 9997 999999999999752 2 23567888887665 6999999999999965543 44445677999986 7789999
Q ss_pred eEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCC
Q 013952 291 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG 333 (433)
Q Consensus 291 vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 333 (433)
|||+|||+..+.... ..+..+..||+.+|++|.+...
T Consensus 303 v~a~GD~~~~~~~~~------~~~~~~~~~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 303 IFMIGATVENDNAKL------CYIYKFRARFAVLAHLLTQREG 339 (369)
T ss_dssp EEECSTTCCCSSCCC------CSHHHHGGGHHHHHHHHHHHTT
T ss_pred eEEeccccccCCeeE------EEEehhhHHHHHHHHHHhcccC
Confidence 999999998765422 3455677889999999987653
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=2.3e-34 Score=278.72 Aligned_cols=286 Identities=20% Similarity=0.237 Sum_probs=201.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.+||+|||||+||+++|..|++.|++ |+|+|+... +.+.+.+ .+|.+... ........+++++.
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~---V~v~e~~~~------~GG~l~~-----gip~~~~~--~~~~~~~~~~l~~~ 185 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYE---VHVYDRYDR------MGGLLVY-----GIPGFKLE--KSVVERRVKLLADA 185 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSS------CSTHHHH-----TSCTTTSC--HHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEeccCC------CCCeeee-----cCCCccCC--HHHHHHHHHHHHHC
Confidence 57999999999999999999999987 999999811 1111111 12222110 00112334667788
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCC-ccccCCCCCCCCCCCCEEEecCHHHHHHHHHH-------
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGST-VLRLTDFGVEGADAKNIFYLREIDDADKLVEA------- 156 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~------- 156 (433)
+++++.++.+. +.+.+++. .+.||+||+|||+. |+.++ ++|.+..++++..++.........
T Consensus 186 gv~~~~~~~v~------~~v~~~~~-~~~~d~vvlAtG~~~~~~~~---ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~ 255 (456)
T 2vdc_G 186 GVIYHPNFEVG------RDASLPEL-RRKHVAVLVATGVYKARDIK---APGSGLGNIVAALDYLTTSNKVSLGDTVEAY 255 (456)
T ss_dssp TCEEETTCCBT------TTBCHHHH-HSSCSEEEECCCCCEECCTT---CSCCTTTTEEEHHHHHHHHHHHHCTTTCSSC
T ss_pred CcEEEeCCEec------cEEEhhHh-HhhCCEEEEecCCCCCCCCC---CCCCcCCCcEEHHHHHHHhhhhhcccccccc
Confidence 99999986542 22333332 36799999999996 55555 678777788864433221111100
Q ss_pred ---HHhcCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCcc-CCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013952 157 ---IKAKKNGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWC-MPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 231 (433)
Q Consensus 157 ---~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~-~V~li~~~~~~-~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~ 231 (433)
.....+++|+|||+|.+|+|+|..+.+.|. +|+++.+.+.. ++. .+.+ .+.+++.||++++++.+.++.
T Consensus 256 ~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~-~~~e-----~~~~~~~Gv~~~~~~~~~~i~ 329 (456)
T 2vdc_G 256 ENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPG-SQRE-----VAHAEEEGVEFIWQAAPEGFT 329 (456)
T ss_dssp CTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSS-CHHH-----HHHHHHTTCEEECCSSSCCEE
T ss_pred cccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCC-CHHH-----HHHHHHCCCEEEeCCCceEEe
Confidence 011357899999999999999999999997 59999998765 443 2332 245778899999999999887
Q ss_pred ecCCCcEEEEEeC------------------CC--cEEECCEEEEcccCccChh--hhh-ccccc-CCCcEEeCCC-CCC
Q 013952 232 TNADGEVKEVKLK------------------DG--RTLEADIVVVGVGGRPLIS--LFK-GQVAE-NKGGIETDDF-FKT 286 (433)
Q Consensus 232 ~~~~g~~~~v~~~------------------~g--~~i~~d~vi~a~G~~p~~~--~~~-~~~~~-~~g~i~vd~~-~~t 286 (433)
. ++++..+++. +| .++++|.||+|+|++|+.. ++. .++.. .+|+|.||++ +||
T Consensus 330 ~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~T 407 (456)
T 2vdc_G 330 G--DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMT 407 (456)
T ss_dssp E--EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBC
T ss_pred C--CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcC
Confidence 5 4433222211 22 4699999999999999875 443 45666 5789999998 999
Q ss_pred CCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCC
Q 013952 287 SADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGG 334 (433)
Q Consensus 287 ~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 334 (433)
+.|+|||+|||+..+ .++..|+.+|+.||.+|...+.+
T Consensus 408 s~~~VfA~GD~~~g~----------~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 408 NMDGVFAAGDIVRGA----------SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp SSTTEEECGGGGSSC----------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeccccCCc----------hHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999765 56888999999999999876543
No 78
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=100.00 E-value=2.1e-33 Score=297.12 Aligned_cols=315 Identities=18% Similarity=0.219 Sum_probs=217.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.+||+|||||+||++||.+|++.|++ +|+|+|+... +.+.+. ..+|.+... ........+++++.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~--~Vtv~E~~~~------~GG~~~-----~~ip~~~~~--~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYS--DITIFEKQEY------VGGLST-----SEIPQFRLP--YDVVNFEIELMKDL 251 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSSS------CSTHHH-----HTSCTTTSC--HHHHHHHHHHHHTT
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCC--cEEEEeCCCC------CCcccc-----ccCCcccCC--HHHHHHHHHHHHHC
Confidence 57999999999999999999999982 3999999811 111111 111221110 00011224567788
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCC-CccccCCCCCCCCC-CCCEEEecCHHHHHHHHHHHH----
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGS-TVLRLTDFGVEGAD-AKNIFYLREIDDADKLVEAIK---- 158 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~-~~~~~~~~~~~g~~-~~~v~~~~~~~~~~~~~~~~~---- 158 (433)
|++++.++.+. .+.+.+.++.++.||+||||||+ .|+.++. ++|.+ ..++++..++... +....+
T Consensus 252 gv~~~~~~~v~-----~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~--~~G~~~~~gv~~a~~~L~~--~~~~~~~~~~ 322 (1025)
T 1gte_A 252 GVKIICGKSLS-----ENEITLNTLKEEGYKAAFIGIGLPEPKTDDI--FQGLTQDQGFYTSKDFLPL--VAKSSKAGMC 322 (1025)
T ss_dssp TCEEEESCCBS-----TTSBCHHHHHHTTCCEEEECCCCCEECCCGG--GTTCCTTTTEEEHHHHHHH--HHHHHCBTTB
T ss_pred CcEEEcccEec-----cceEEhhhcCccCCCEEEEecCCCCCCCCCC--CCCCCCCCCEEEhHHHHHH--HHhhcccccc
Confidence 99999986652 23455555556789999999999 5876653 23432 3567764432211 111100
Q ss_pred ------hcCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCc-cCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013952 159 ------AKKNGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW-CMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGF 230 (433)
Q Consensus 159 ------~~~~~~v~ViG~G~~g~e~a~~l~~~g~-~V~li~~~~~-~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i 230 (433)
...+++|+|||+|.+|+|+|..+.+.|. +|+++++.+. .++. ++.++ +.+++.||++++++.+.++
T Consensus 323 ~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~-~~~e~-----~~~~~~Gv~~~~~~~~~~i 396 (1025)
T 1gte_A 323 ACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRA-VPEEV-----ELAKEEKCEFLPFLSPRKV 396 (1025)
T ss_dssp SCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCS-CHHHH-----HHHHHTTCEEECSEEEEEE
T ss_pred cccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCC-CHHHH-----HHHHHcCCEEEeCCCceEE
Confidence 1135799999999999999999999996 8999999873 4443 44443 4567889999999999999
Q ss_pred EecCCCcEEEEEeC------CC---------cEEECCEEEEcccCccC-hhhhhc--cccc-CCCcEEeCC-CCCCCCCC
Q 013952 231 TTNADGEVKEVKLK------DG---------RTLEADIVVVGVGGRPL-ISLFKG--QVAE-NKGGIETDD-FFKTSADD 290 (433)
Q Consensus 231 ~~~~~g~~~~v~~~------~g---------~~i~~d~vi~a~G~~p~-~~~~~~--~~~~-~~g~i~vd~-~~~t~~~~ 290 (433)
.. +++++..+++. +| .++++|.||+|+|++|+ ..++.. ++.. .+|+|.||+ ++||+.|+
T Consensus 397 ~~-~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~ 475 (1025)
T 1gte_A 397 IV-KGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPW 475 (1025)
T ss_dssp EE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTT
T ss_pred Ec-cCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCC
Confidence 76 45666556542 22 36899999999999864 555543 5666 478899997 89999999
Q ss_pred eEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCC---CCCccCCCCCCeEEE--eecccceEEecC
Q 013952 291 VYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG---GKTVTGYDYLPYFYS--RAFDLSWQFYGD 360 (433)
Q Consensus 291 vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~---~~~~~~~~~~p~~~~--~~~~~~~~~~g~ 360 (433)
|||+|||+..+ .++..|..+|+.||.+|.+.+. +.....+..+|++|+ ...+++....|.
T Consensus 476 VfA~GD~~~~~----------~~~~~A~~~G~~aA~~i~~~L~~~~~~~~~~~~~~p~~~~ev~~v~ls~~~~G~ 540 (1025)
T 1gte_A 476 VFAGGDIVGMA----------NTTVESVNDGKQASWYIHKYIQAQYGASVSAKPELPLFYTPVDLVDISVEMAGL 540 (1025)
T ss_dssp EEECSGGGCSC----------CCHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCCBCCCCCGGGGCCCCEEETTE
T ss_pred EEEeCCCCCCc----------hHHHHHHHHHHHHHHHHHHHHHhccCCCcccCcCccccccccccccceeeeccc
Confidence 99999999865 4577899999999999986432 222235567888887 345555555553
No 79
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=4.9e-33 Score=270.13 Aligned_cols=293 Identities=14% Similarity=0.157 Sum_probs=201.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.+||+|||||++|+++|..|++.|. ..+|+|||+...++. .+.... .|.+.. .......+.+++++.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~-~~~V~vie~~~~~gg-------~~~~g~---~p~~~~--~~~~~~~~~~~~~~~ 72 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHS-RAHVDIYEKQLVPFG-------LVRFGV---APDHPE--VKNVINTFTQTARSD 72 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCS-SCEEEEECSSSSSCT-------HHHHTS---CTTCGG--GGGHHHHHHHHHTST
T ss_pred CceEEEECcCHHHHHHHHHHHhcCC-CCCEEEEeCCCcCCc-------eeeccc---CCCCcc--HHHHHHHHHHHHHhC
Confidence 5799999999999999999999881 244999999832331 111000 011110 000112234556678
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCc-cccCCCCCCCCCCCCEEEecCHHHHHHHH-H--HHH-h
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTV-LRLTDFGVEGADAKNIFYLREIDDADKLV-E--AIK-A 159 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~-~~~~~~~~~g~~~~~v~~~~~~~~~~~~~-~--~~~-~ 159 (433)
+++++.++.+ .+.|.+.+ .++.||+||+|||+.+ +.|+ +||.+.++++++.++....... + .+. .
T Consensus 73 gv~~~~~~~v------~~~V~~~~-~~~~~d~lVlAtGs~~~~~~~---ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~ 142 (460)
T 1cjc_A 73 RCAFYGNVEV------GRDVTVQE-LQDAYHAVVLSYGAEDHQALD---IPGEELPGVFSARAFVGWYNGLPENRELAPD 142 (460)
T ss_dssp TEEEEBSCCB------TTTBCHHH-HHHHSSEEEECCCCCEECCCC---CTTTTSTTEEEHHHHHHHHTTCGGGTTCCCC
T ss_pred CcEEEeeeEE------eeEEEecc-ceEEcCEEEEecCcCCCCCCC---CCCCCCCcEEEHHHHHHHhhcCccccccccC
Confidence 9999988655 23344433 3478999999999985 5565 6777767888765442111000 0 000 1
Q ss_pred cCCCcEEEECCCHHHHHHHHHHH--------------------hCCC-eEEEEccCCccCCCC-----------------
Q 013952 160 KKNGKAVVVGGGYIGLELSAALK--------------------INNI-DVSMVYPEPWCMPRL----------------- 201 (433)
Q Consensus 160 ~~~~~v~ViG~G~~g~e~a~~l~--------------------~~g~-~V~li~~~~~~~~~~----------------- 201 (433)
..+++++|||+|++|+|+|..|. +.+. +|+++.+.+.+...+
T Consensus 143 ~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~ 222 (460)
T 1cjc_A 143 LSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPM 222 (460)
T ss_dssp TTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeE
Confidence 14789999999999999999998 5676 799999887652111
Q ss_pred ---------------CCHH---HHHHHHHHHHh--------------cCcEEEcCCeEEEEEecCCC-cEEEEEeC----
Q 013952 202 ---------------FTAD---IAAFYEGYYAN--------------KGIKIIKGTVAVGFTTNADG-EVKEVKLK---- 244 (433)
Q Consensus 202 ---------------~~~~---~~~~l~~~l~~--------------~GV~v~~~~~v~~i~~~~~g-~~~~v~~~---- 244 (433)
.+.. +.+.+.+.+++ .||++++++.+.+|..++++ ++..|++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l 302 (460)
T 1cjc_A 223 LDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRL 302 (460)
T ss_dssp CCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEE
T ss_pred echhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEE
Confidence 0110 23344455555 89999999999999873325 66555543
Q ss_pred -----------CC--cEEECCEEEEcccCccChhhhhccc-cc-CCCcEEeCCCCCCC-CCCeEEcCccccccccccCcc
Q 013952 245 -----------DG--RTLEADIVVVGVGGRPLISLFKGQV-AE-NKGGIETDDFFKTS-ADDVYAVGDVATFPMKLYREM 308 (433)
Q Consensus 245 -----------~g--~~i~~d~vi~a~G~~p~~~~~~~~~-~~-~~g~i~vd~~~~t~-~~~vfa~Gd~~~~~~~~~~~~ 308 (433)
+| ++++||.||+++|++|+. + .++ .. ++++|.+|+++||+ .|+|||+|||+..+.
T Consensus 303 ~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l--~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~------ 373 (460)
T 1cjc_A 303 EGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-I--DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT------ 373 (460)
T ss_dssp ESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-C--CTTSCCBTTTTBCCEETTEETTCTTEEECTHHHHCTT------
T ss_pred ccccCCCcccCCCceEEEEcCEEEECCCCCCCC-C--CCCcccccCCCeeECCCCcCcCCCCEEEEEeCCcCCC------
Confidence 34 579999999999999998 3 456 55 56889999999998 799999999997653
Q ss_pred cccccHHHHHHHHHHHHHHHhccC
Q 013952 309 RRVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 309 ~~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
..+..|..+|+.+|.+|.+..
T Consensus 374 ---~~i~~a~~~g~~aa~~i~~~l 394 (460)
T 1cjc_A 374 ---GVITTTMTDSFLTGQILLQDL 394 (460)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccHHHHHHHHHHHHHHHHHHH
Confidence 346678999999999998764
No 80
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=100.00 E-value=1.6e-32 Score=288.39 Aligned_cols=285 Identities=16% Similarity=0.223 Sum_probs=207.1
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh-
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE- 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 83 (433)
.+||+|||||+||++||.+|++.|++ |+|||++..+. +.+... ....+++... ........+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~---V~lie~~~~~G------G~~~~~-~k~~i~~~~~---~~~~~~~~~~l~~~ 194 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGAR---VMLLDERAEAG------GTLLDT-AGEQIDGMDS---SAWIEQVTSELAEA 194 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSS------GGGGGS-SCCEETTEEH---HHHHHHHHHHHHHS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCCCCCC------ceeccC-CccccCCCCH---HHHHHHHHHHHhhc
Confidence 57999999999999999999999987 99999982111 111100 0001111100 0001112233444
Q ss_pred CCcEEEeCceEEEEECCCCEEEe-----------------CCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecC
Q 013952 84 KGIELILSTEIVRADIASKTLLS-----------------ATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLRE 146 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~-----------------~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~ 146 (433)
.+++++.++.|..++..+..... .++.++.||+||||||+.|+.|+ +||.+.+++++..+
T Consensus 195 ~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~---ipG~~~~gv~~~~~ 271 (965)
T 2gag_A 195 EETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIV---FENNDRPGIMLAGA 271 (965)
T ss_dssp TTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCC---CBTCCSTTEEEHHH
T ss_pred CCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCC---CCCCCCCCEEEhHH
Confidence 48999999899988865432111 11236899999999999988777 67877788887554
Q ss_pred HHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCe
Q 013952 147 IDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTV 226 (433)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~ 226 (433)
..+ +.+.....++++++|||+|++|+|+|..|.+.|.+|+++++.+.+++ . .+.+++.||++++++.
T Consensus 272 ~~~---~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~-----~-----~~~l~~~GV~v~~~~~ 338 (965)
T 2gag_A 272 VRS---YLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA-----A-----AAQAVADGVQVISGSV 338 (965)
T ss_dssp HHH---HHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH-----H-----HHHHHHTTCCEEETEE
T ss_pred HHH---HHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch-----h-----HHHHHhCCeEEEeCCE
Confidence 322 22211222568999999999999999999999999999998876542 2 4567899999999999
Q ss_pred EEEEEecCCCcEEEEEeCC-------C--cEEECCEEEEcccCccChhhhhcccccCCCcEEeCCCCC-----CCCCCeE
Q 013952 227 AVGFTTNADGEVKEVKLKD-------G--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFK-----TSADDVY 292 (433)
Q Consensus 227 v~~i~~~~~g~~~~v~~~~-------g--~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~-----t~~~~vf 292 (433)
+.++..++++++..|.+.+ | +++++|.|++++|++|++.++.. ..++|.+|++++ |+.|+||
T Consensus 339 v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~----~~g~i~vd~~~~~~v~~ts~p~Iy 414 (965)
T 2gag_A 339 VVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQ----RQGKLDWDTTIHAFVPADAVANQH 414 (965)
T ss_dssp EEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHH----TTCCEEEETTTTEEEECSCCTTEE
T ss_pred eEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHh----CCCcEEEcCcccccccCCCCCCEE
Confidence 9999863245555666654 4 67999999999999999987743 257899999987 8999999
Q ss_pred EcCccccccccccCcccccccHHHHHHHHHHHHHHHhccCC
Q 013952 293 AVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEG 333 (433)
Q Consensus 293 a~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 333 (433)
|+|||++.+. +..|..||+.||.+|.+...
T Consensus 415 AaGD~a~~~~-----------l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 415 LAGAMTGRLD-----------TASALSTGAATGAAAATAAG 444 (965)
T ss_dssp ECGGGGTCCS-----------HHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCCchh-----------HHHHHHHHHHHHHHHHHHcC
Confidence 9999998642 34789999999999987543
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=100.00 E-value=1.9e-33 Score=272.78 Aligned_cols=289 Identities=17% Similarity=0.207 Sum_probs=199.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHH-c------CCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAK-Q------GVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLL 77 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~-~------g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (433)
.+||+|||||+||++||..|++ . +.+ |+|||+...++..+ ..+. .|.... .......+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~---V~lie~~~~~gg~~--~~gv--------~p~~~~--~~~~~~~~ 67 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMA---VDMLEMLPTPWGLV--RSGV--------APDHPK--IKSISKQF 67 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEE---EEEEESSSSCSTHH--HHTS--------CTTCTG--GGGGHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCe---EEEEecCCCCCCcc--cccc--------CCCCCC--HHHHHHHH
Confidence 6899999999999999999999 7 665 99999983333211 0000 011100 00111234
Q ss_pred HhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCC-ccccCCCCCCCCCCCCEEEecCHHHHHHH-H-
Q 013952 78 PEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGST-VLRLTDFGVEGADAKNIFYLREIDDADKL-V- 154 (433)
Q Consensus 78 ~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~-~~~~~~~~~~g~~~~~v~~~~~~~~~~~~-~- 154 (433)
.+++++.+++++.+..+ ++.|.+.++ ++.||+||+|||+. ++.++ +||.+..++++..++.....- .
T Consensus 68 ~~~~~~~~v~~~~~v~v------~~~v~~~~~-~~~~d~lViAtG~~~~~~~~---ipG~~~~gv~~~~~~~~~~~~~~d 137 (456)
T 1lqt_A 68 EKTAEDPRFRFFGNVVV------GEHVQPGEL-SERYDAVIYAVGAQSDRMLN---IPGEDLPGSIAAVDFVGWYNAHPH 137 (456)
T ss_dssp HHHHTSTTEEEEESCCB------TTTBCHHHH-HHHSSEEEECCCCCEECCCC---CTTTTSTTEEEHHHHHHHHTTCGG
T ss_pred HHHHhcCCCEEEeeEEE------CCEEEECCC-eEeCCEEEEeeCCCCCCCCC---CCCCCCCCcEEHHHHHhhhhcCcc
Confidence 45566789999887543 234555444 47999999999997 56555 677766778865543211000 0
Q ss_pred --HHHHhcCCCcEEEECCCHHHHHHHHHHHhC--------------------C-CeEEEEccCCccCCCCCCH-------
Q 013952 155 --EAIKAKKNGKAVVVGGGYIGLELSAALKIN--------------------N-IDVSMVYPEPWCMPRLFTA------- 204 (433)
Q Consensus 155 --~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~--------------------g-~~V~li~~~~~~~~~~~~~------- 204 (433)
..+....+++++|||+|++|+|+|..|.+. + .+|+++.+.+.+...+.++
T Consensus 138 ~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~ 217 (456)
T 1lqt_A 138 FEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELAD 217 (456)
T ss_dssp GTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGG
T ss_pred cccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhc
Confidence 001112578999999999999999999874 5 4999999988765432111
Q ss_pred -----------HH------------------HHHHHHHHHh------cCcEEEcCCeEEEEEecCCCcEEEEEeC-----
Q 013952 205 -----------DI------------------AAFYEGYYAN------KGIKIIKGTVAVGFTTNADGEVKEVKLK----- 244 (433)
Q Consensus 205 -----------~~------------------~~~l~~~l~~------~GV~v~~~~~v~~i~~~~~g~~~~v~~~----- 244 (433)
++ .+.+.+.+++ +||++++++.+.++.. ++++..|++.
T Consensus 218 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~--~~~v~~v~~~~~~~~ 295 (456)
T 1lqt_A 218 LDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKG--KRKVERIVLGRNELV 295 (456)
T ss_dssp CTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEEC--SSSCCEEEEEEEEEE
T ss_pred CCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEec--CCcEeEEEEEEEEec
Confidence 11 2344455555 7999999999999986 4554445443
Q ss_pred -----------CC--cEEECCEEEEcccCccChhhhhccccc-CCCcEEeCCCCC-CCCCCeEEcCccccccccccCccc
Q 013952 245 -----------DG--RTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETDDFFK-TSADDVYAVGDVATFPMKLYREMR 309 (433)
Q Consensus 245 -----------~g--~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd~~~~-t~~~~vfa~Gd~~~~~~~~~~~~~ 309 (433)
+| ++++||.||+|+|++|+. + .++.+ ++|++.+|+++| |+.|+|||+|||+..+.
T Consensus 296 ~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l--~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~------- 365 (456)
T 1lqt_A 296 SDGSGRVAAKDTGEREELPAQLVVRSVGYRGVP-T--PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPT------- 365 (456)
T ss_dssp ECSSSSEEEEEEEEEEEEECSEEEECSCEECCC-C--TTSCCBTTTTBCCEETTEETTCSSEEECTHHHHCSC-------
T ss_pred CCCcccccccCCCceEEEEcCEEEEccccccCC-C--CCCcccCCCCeeECCCCcCCCCCCEEEEeccCCCCc-------
Confidence 34 469999999999999998 3 35555 568899999999 89999999999997653
Q ss_pred ccccHHHHHHHHHHHHHHHhccC
Q 013952 310 RVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 310 ~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
..+..|..+|+.+|.+|++..
T Consensus 366 --~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 366 --GVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp --SCTTHHHHHHHHHHHHHHHHH
T ss_pred --hhHHHHHHHHHHHHHHHHHHH
Confidence 234467899999999998654
No 82
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.98 E-value=2.1e-31 Score=259.71 Aligned_cols=284 Identities=15% Similarity=0.174 Sum_probs=195.4
Q ss_pred CeEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEcCC-CC--CCCCCCcc---------ccccCCC----CC---CCCC
Q 013952 6 FKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKE-VA--PYERPALS---------KAYLFPE----GT---ARLP 63 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~---~g~~~~~V~lie~~-~~--~~~~~~~~---------~~~~~~~----~~---~~~~ 63 (433)
+||+|||||++|++||..|++ .|++..+|+|+|++ .. .+...... ...++.. .. ..++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 88654459999997 21 11100000 0000000 00 0011
Q ss_pred Ccccc--cC---C------CCCCCCHhHHHhCCcE--EEeCceEEEEECCCC----EEEeCC---C--cEEecceEEEcc
Q 013952 64 GFHVC--VG---S------GGERLLPEWYKEKGIE--LILSTEIVRADIASK----TLLSAT---G--LIFKYQILVIAT 121 (433)
Q Consensus 64 ~~~~~--~~---~------~~~~~~~~~~~~~~v~--~~~~~~v~~i~~~~~----~v~~~~---~--~~~~~d~lvlAt 121 (433)
++... .+ . .....+.+.+++.+++ +..++.|..++.... +|++.+ + .++.||+||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 11100 00 0 0011123344556887 888889999987654 566654 3 578999999999
Q ss_pred C--CCccccCCCCCCCCCC--CCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 122 G--STVLRLTDFGVEGADA--KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 122 G--~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
| +.|+.|+ +||.+. ..+++..++.+... ..+++|+|||+|.+|+|+|..|.+.|.+|+++.+.+.+
T Consensus 163 G~~s~p~~p~---ipG~~~~~g~~~hs~~~~~~~~-------~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 163 GHFSTPYVPE---FEGFEKFGGRILHAHDFRDALE-------FKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp CSSSSBCCCC---CBTTTTCCSEEEEGGGCCCGGG-------GTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCCCCCccCC---CCCcccCCceEEehhhhCCHhH-------cCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 9 7888877 455442 23555544333221 26899999999999999999999999999999998877
Q ss_pred CCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhc--ccccCC
Q 013952 198 MPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKG--QVAENK 275 (433)
Q Consensus 198 ~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~--~~~~~~ 275 (433)
++..+ ..||+++ ..|.++.. + .|.+.+|+++++|.||+|||++|+.+++.. ++..++
T Consensus 233 ~~~~~-------------~~~V~~~--~~V~~i~~--~----~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~ 291 (464)
T 2xve_A 233 MGYKW-------------PENWDER--PNLVRVDT--E----NAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNN 291 (464)
T ss_dssp CCCCC-------------CTTEEEC--SCEEEECS--S----EEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCS
T ss_pred CCCCC-------------CCceEEc--CCeEEEeC--C----EEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCC
Confidence 65422 2578887 67888853 2 578899999999999999999999988864 455544
Q ss_pred C-cEEeCCC---CCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccC
Q 013952 276 G-GIETDDF---FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 276 g-~i~vd~~---~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
+ ++ ++.+ ++|+.|+||++|||+.. ..+..|..||+.+|+++.+..
T Consensus 292 ~~~v-~~~~~~~~~t~~p~i~aiGd~~~~-----------~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 292 RLWP-LNLYKGVVWEDNPKFFYIGMQDQW-----------YSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp SSCC-SSEETTTEESSSTTEEECSCSCCS-----------SCHHHHHHHHHHHHHHHTTSS
T ss_pred Cccc-ccccceEecCCCCCEEEEeCcccc-----------cchHHHHHHHHHHHHHHcCCC
Confidence 4 44 4433 57899999999998763 346778899999999998754
No 83
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=8.4e-32 Score=263.70 Aligned_cols=312 Identities=15% Similarity=0.060 Sum_probs=195.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcC-----CCCCcEEEEcCC-CCCCCCCCc-cccccC---------CCCCCCCCCcc--
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQG-----VKPGELAIISKE-VAPYERPAL-SKAYLF---------PEGTARLPGFH-- 66 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g-----~~~~~V~lie~~-~~~~~~~~~-~~~~~~---------~~~~~~~~~~~-- 66 (433)
.+||+|||||++|+++|..|++.| .+ |+|||++ ...|....+ ....+. ...+.....+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~---v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~ 106 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALE---VLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNY 106 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCC---EEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCccc---EEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHh
Confidence 469999999999999999999998 66 9999999 433332111 000000 00000000000
Q ss_pred -cccC--------CCC-------CCCCHhHHHhCCcEEEeCceEEEEECC---CC----EEEeCCCc----EEecceEEE
Q 013952 67 -VCVG--------SGG-------ERLLPEWYKEKGIELILSTEIVRADIA---SK----TLLSATGL----IFKYQILVI 119 (433)
Q Consensus 67 -~~~~--------~~~-------~~~~~~~~~~~~v~~~~~~~v~~i~~~---~~----~v~~~~~~----~~~~d~lvl 119 (433)
...+ ... ...+....++.++++..+++|..+++. ++ .|.+.++. ++.||+||+
T Consensus 107 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVl 186 (463)
T 3s5w_A 107 LHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVV 186 (463)
T ss_dssp HHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEE
T ss_pred hhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEE
Confidence 0000 000 011112233467899999899999875 43 56666665 899999999
Q ss_pred ccCCCccccCCCCCCCCCCC-CEEEecCHHH-HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCC
Q 013952 120 ATGSTVLRLTDFGVEGADAK-NIFYLREIDD-ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEP 195 (433)
Q Consensus 120 AtG~~~~~~~~~~~~g~~~~-~v~~~~~~~~-~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~ 195 (433)
|||+.|..|+. +++.... .+++.....+ ...+.... ..+++|+|||+|.+|+|+|..|.+. +.+|+++.+.+
T Consensus 187 AtG~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~ 262 (463)
T 3s5w_A 187 SPGGTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSS--GKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS 262 (463)
T ss_dssp CCCCEECCCGG--GGGGTTCTTEEEGGGHHHHHCC---------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCCCCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcc--cCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC
Confidence 99998887763 3333333 5666554332 21221111 1478999999999999999999998 89999999988
Q ss_pred ccCCCC-------------------CCHHHHHHHHHHHHh--------------------------cCcEEEcCCeEEEE
Q 013952 196 WCMPRL-------------------FTADIAAFYEGYYAN--------------------------KGIKIIKGTVAVGF 230 (433)
Q Consensus 196 ~~~~~~-------------------~~~~~~~~l~~~l~~--------------------------~GV~v~~~~~v~~i 230 (433)
.+++.. ++++....+.+.+.. .||+++++++|+++
T Consensus 263 ~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v 342 (463)
T 3s5w_A 263 ALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERA 342 (463)
T ss_dssp SCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEE
T ss_pred CCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEE
Confidence 765421 122222233222222 69999999999999
Q ss_pred EecCCCcEEEEEeC---CCc--EEECCEEEEcccCccC--hhhhhcccccCCCcEEeCCCCCCC-----CCCeEEcCccc
Q 013952 231 TTNADGEVKEVKLK---DGR--TLEADIVVVGVGGRPL--ISLFKGQVAENKGGIETDDFFKTS-----ADDVYAVGDVA 298 (433)
Q Consensus 231 ~~~~~g~~~~v~~~---~g~--~i~~d~vi~a~G~~p~--~~~~~~~~~~~~g~i~vd~~~~t~-----~~~vfa~Gd~~ 298 (433)
..++ ....+.+. +|+ ++++|.||+|+|++|+ ..++....... |++.||+++++. .|+|||+|||.
T Consensus 343 ~~~~--~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~-g~i~v~~~~~~~~~~~~~~~Ifa~G~~~ 419 (463)
T 3s5w_A 343 TATA--QGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL-GDHEIGRDYRLQTDERCKVAIYAQGFSQ 419 (463)
T ss_dssp EEET--TEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB-C--CCCTTSBCCBCTTBCSEEEESSCCH
T ss_pred EecC--CEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh-CCcccCcccccccCCCCCCeEEEcCCCc
Confidence 8733 33456665 665 4999999999999999 44543211112 889999999873 56799999998
Q ss_pred cccccccCcccccccHHHHHHHHHHHHHHHhcc
Q 013952 299 TFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 331 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 331 (433)
...... .+ .....|.+++++++..+-..
T Consensus 420 ~~~g~~--~~---~l~~~a~r~~~i~~~~~~~~ 447 (463)
T 3s5w_A 420 ASHGLS--DT---LLSVLPVRAEEISGSLYQHL 447 (463)
T ss_dssp HHHCTT--TT---SSTTHHHHHHHHHHHHHHHH
T ss_pred ccCCcC--cc---chhHHHHHHHHHHHHHHhhc
Confidence 643321 11 34455777888776555443
No 84
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=2.3e-32 Score=280.00 Aligned_cols=300 Identities=16% Similarity=0.168 Sum_probs=197.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.+||+|||||+||++||..|++.|++ |+|+|++... .+.+... ..+|++.. .....+++..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~---Vtlie~~~~~------GG~~~~~---~~~pg~~~------~~~~~~~~~~- 449 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYT---VHLTDTAEKI------GGHLNQV---AALPGLGE------WSYHRDYRET- 449 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSST------TTTHHHH---TTSTTCGG------GHHHHHHHHH-
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCCCc------CCeeeec---ccCCChHH------HHHHHHHHHH-
Confidence 57999999999999999999999987 9999998211 1111111 11222110 0111111111
Q ss_pred CcEEE--eCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccc-----cCCCCCCCCC--CCCEEEecCHHHHHHHHH
Q 013952 85 GIELI--LSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR-----LTDFGVEGAD--AKNIFYLREIDDADKLVE 155 (433)
Q Consensus 85 ~v~~~--~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~-----~~~~~~~g~~--~~~v~~~~~~~~~~~~~~ 155 (433)
.++.. ....+..+.. ++.+.++++.++.||+||+|||+.|+. |..+.+||.+ ..++++.. +... .
T Consensus 450 ~i~~~~~~~~~~v~i~~-~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~---~~l~--~ 523 (729)
T 1o94_A 450 QITKLLKKNKESQLALG-QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPE---QVMD--G 523 (729)
T ss_dssp HHHHHHHHSTTCEEECS-CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHH---HHHH--C
T ss_pred HHHHhhcccCCceEEEe-CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHH---HHhc--C
Confidence 01100 0011222222 233444455568999999999998532 2222367765 55677532 2211 1
Q ss_pred HHHhcCCCcEEEEC--CCHHHHHHHHHHHhCCCeEEEEccCCccCCC-CCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEe
Q 013952 156 AIKAKKNGKAVVVG--GGYIGLELSAALKINNIDVSMVYPEPWCMPR-LFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 232 (433)
Q Consensus 156 ~~~~~~~~~v~ViG--~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~-~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~ 232 (433)
....+++|+||| +|.+|+|+|..|.+.|.+|+++++.+ +++. .++.. ...+.+.+++.||++++++.+.++..
T Consensus 524 --~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~ 599 (729)
T 1o94_A 524 --KKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEP 599 (729)
T ss_dssp --CSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEET
T ss_pred --CCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEEC
Confidence 122468999998 99999999999999999999999988 5431 12222 45677888999999999999999975
Q ss_pred cCCCcEEEEEeCCC-cE------------------EECCEEEEcccCccChhhhhcccccCCCcEEeCCCCCCCCCCeEE
Q 013952 233 NADGEVKEVKLKDG-RT------------------LEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYA 293 (433)
Q Consensus 233 ~~~g~~~~v~~~~g-~~------------------i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~vfa 293 (433)
++........++ +. +++|.||+|+|++|++.++.. +.. .+|+++||+.|+|||
T Consensus 600 --~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~~-l~~-----~vd~~~~t~~~~VyA 671 (729)
T 1o94_A 600 --GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWNE-LKA-----RESEWAENDIKGIYL 671 (729)
T ss_dssp --TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHHH-HHH-----TGGGTGGGTCCEEEE
T ss_pred --CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHHH-Hhh-----hcccccccCCCCeEE
Confidence 331111111232 22 999999999999999987652 211 268899999999999
Q ss_pred cCccccccccccCcccccccHHHHHHHHHHHHHHHhccCCCCCccCCCCCCeEEEeecccceEEec
Q 013952 294 VGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATEGGKTVTGYDYLPYFYSRAFDLSWQFYG 359 (433)
Q Consensus 294 ~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~g 359 (433)
+|||+.. ..+..|..+|+.||.+|.+.. .+..+|+ ++..+++..+.+|
T Consensus 672 iGD~~~~-----------~~~~~A~~~G~~aA~~i~~~l------~~~~~p~-~~~~~~~~~~~~~ 719 (729)
T 1o94_A 672 IGDAEAP-----------RLIADATFTGHRVAREIEEAN------PQIAIPY-KRETIAWGTPHMP 719 (729)
T ss_dssp CGGGTSC-----------CCHHHHHHHHHHHHHTTTSSC------TTSCCCC-CCCCCCTTCCSST
T ss_pred EeCccch-----------hhHHHHHHHHHHHHHHhhhhc------ccCCCCe-eeecccCcccccC
Confidence 9999862 457789999999999998753 4456676 6677777665555
No 85
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.97 E-value=2.9e-31 Score=260.67 Aligned_cols=259 Identities=15% Similarity=0.087 Sum_probs=188.1
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
..+||+|||||++|+++|.+|++. ++ |+|+|++ ...+.....+.. ...+++.. ......+.+.+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~---V~vie~~~~~GG~~~~~~~~------~~g~~~~~----~~~~~~l~~~l- 171 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LT---VALIEERGWLGGDMWLKGIK------QEGFNKDS----RKVVEELVGKL- 171 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CC---EEEECTTSSSSCSGGGTCSE------ETTTTEEH----HHHHHHHHHTC-
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CC---EEEEeCCCCCCCeeeccccc------cCCCCCCH----HHHHHHHHHHH-
Confidence 357999999999999999999998 66 9999998 322211100000 00011000 00000111112
Q ss_pred hCCcEEEeCceEEEEECCCCEEEe---CCCc--EEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHH
Q 013952 83 EKGIELILSTEIVRADIASKTLLS---ATGL--IFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI 157 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~---~~~~--~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 157 (433)
+.+++++.++.+..++.+++.+.. .+++ ++.||+||+|||+.|+.|+ ++|.+.+++++.. ++..+.+..
T Consensus 172 ~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~~---~~g~~~~gv~~~~---~~~~~~~~~ 245 (493)
T 1y56_A 172 NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTML---FENNDMPGVFRRD---FALEVMNVW 245 (493)
T ss_dssp CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCCC---CTTTTSTTEEEHH---HHHHHHHTS
T ss_pred hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCCC---CCCCCCCCEEEcH---HHHHHHHhc
Confidence 458999888888888877664332 3443 6899999999999998777 6777777888643 333333322
Q ss_pred HhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc
Q 013952 158 KAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE 237 (433)
Q Consensus 158 ~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~ 237 (433)
...++++++|+|+|++++| +.+++.||++++++.|.++.. ++.
T Consensus 246 ~~~~~~~vvViGgG~~gle-----------------------------------~~l~~~GV~v~~~~~v~~i~~--~~~ 288 (493)
T 1y56_A 246 EVAPGRKVAVTGSKADEVI-----------------------------------QELERWGIDYVHIPNVKRVEG--NEK 288 (493)
T ss_dssp CBCSCSEEEEESTTHHHHH-----------------------------------HHHHHHTCEEEECSSEEEEEC--SSS
T ss_pred ccCCCCEEEEECCCHHHHH-----------------------------------HHHHhCCcEEEeCCeeEEEec--CCc
Confidence 2235689999999999988 456788999999999999986 445
Q ss_pred EEEEEeCCCcEEECCEEEEcccCccChhhhhc-cccc---CCCcEE-eCCCCCCCCCCeEEcCccccccccccCcccccc
Q 013952 238 VKEVKLKDGRTLEADIVVVGVGGRPLISLFKG-QVAE---NKGGIE-TDDFFKTSADDVYAVGDVATFPMKLYREMRRVE 312 (433)
Q Consensus 238 ~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~-~~~~---~~g~i~-vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~ 312 (433)
+..+.+.+|+++++|.||+|+|++|+.+++.. ++.. ++|++. ||++++ +.|+|||+|||++. .
T Consensus 289 v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i~~vd~~~~-s~~~vya~GD~~~~-----------~ 356 (493)
T 1y56_A 289 VERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYSPVLDEYHR-IKDGIYVAGSAVSI-----------K 356 (493)
T ss_dssp CCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEEECCCTTSE-EETTEEECSTTTCC-----------C
T ss_pred eEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCccccCCceeeccccccC-cCCCEEEEeccCCc-----------c
Confidence 56788888989999999999999999987743 4433 366777 899999 89999999999975 3
Q ss_pred cHHHHHHHHHHHHHHHhccC
Q 013952 313 HVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 313 ~~~~A~~~g~~aa~~i~~~~ 332 (433)
++..|..+|++||.+|.+..
T Consensus 357 ~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 357 PHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp CHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHc
Confidence 57789999999999998764
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=3.1e-32 Score=278.12 Aligned_cols=284 Identities=17% Similarity=0.167 Sum_probs=199.1
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
..+||+|||||+||++||++|+++|++ |+|+|++... .+.+... ...|+.... ..........+.+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~---V~liE~~~~~------GG~~~~~---~~~p~~~~~--~~~~~~~~~~~~~ 455 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYD---VVLAEAGRDL------GGRVTQE---SALPGLSAW--GRVKEYREAVLAE 455 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSS------CTHHHHH---HTSTTCGGG--GHHHHHHHHHHHT
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCe---EEEEecCCCC------CCEeeec---cCCCchhHH--HHHHHHHHHHHHH
Confidence 358999999999999999999999987 9999998211 1111110 111111100 0001123344555
Q ss_pred C-CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccc-----cCCCCCCCCCCCCEEEecCHHHHHHHHHHH
Q 013952 84 K-GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR-----LTDFGVEGADAKNIFYLREIDDADKLVEAI 157 (433)
Q Consensus 84 ~-~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~-----~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~ 157 (433)
. +++++.++.+ ...+..++.||+||+|||+.|+. |..+.++|.+...+++.. +... .
T Consensus 456 ~~gv~~~~~~~v----------~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~---~~l~--~-- 518 (690)
T 3k30_A 456 LPNVEIYRESPM----------TGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPD---DLFA--G-- 518 (690)
T ss_dssp CTTEEEESSCCC----------CHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHH---HHHT--T--
T ss_pred cCCCEEEECCee----------cHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHH---HHhC--C--
Confidence 5 8888877543 22334568899999999998542 112226776655555432 2111 1
Q ss_pred HhcCCCcEEEEC--CCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC
Q 013952 158 KAKKNGKAVVVG--GGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 235 (433)
Q Consensus 158 ~~~~~~~v~ViG--~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~ 235 (433)
....+++++||| +|.+|+|+|..|.+.|.+|+++++.+.+++...+......+.+.+++.||+++++++|+++.. +
T Consensus 519 ~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~--~ 596 (690)
T 3k30_A 519 RLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGA--G 596 (690)
T ss_dssp CCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEET--T
T ss_pred CCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEEC--C
Confidence 122467899999 999999999999999999999999888776544466678888999999999999999999975 3
Q ss_pred CcEEEEE---eCCCcEEECCEEEEcccCccChhhhhcccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccc
Q 013952 236 GEVKEVK---LKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVE 312 (433)
Q Consensus 236 g~~~~v~---~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~ 312 (433)
+ ..+. ..+++++++|.||+|+|++|+..++... .. .+. +|+.|+||++|||+.. .
T Consensus 597 ~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l-~~-~~~-------~t~~~~VyaiGD~~~~-----------~ 654 (690)
T 3k30_A 597 G--VTVRDTYASIERELECDAVVMVTARLPREELYLDL-VA-RRD-------AGEIASVRGIGDAWAP-----------G 654 (690)
T ss_dssp E--EEEEETTTCCEEEEECSEEEEESCEEECCHHHHHH-HH-HHH-------HTSCSEEEECGGGTSC-----------B
T ss_pred e--EEEEEccCCeEEEEECCEEEECCCCCCChHHHHHH-hh-hhc-------ccCCCCEEEEeCCCch-----------h
Confidence 3 2233 2345689999999999999999876431 11 111 7899999999999974 3
Q ss_pred cHHHHHHHHHHHHHHHhccCCCCCccCCCC
Q 013952 313 HVDHARKSAEQAVKTIMATEGGKTVTGYDY 342 (433)
Q Consensus 313 ~~~~A~~~g~~aa~~i~~~~~~~~~~~~~~ 342 (433)
.+..|..||+.+|.+|.+...+..+.+|..
T Consensus 655 ~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~ 684 (690)
T 3k30_A 655 TIAAAVWSGRRAAEEFDAVLPSNDEVPFRR 684 (690)
T ss_dssp CHHHHHHHHHHHHHHTTCCCCCTTSCSSCC
T ss_pred hHHHHHHHHHHHHHHHHhhccCCCCCCcCh
Confidence 466799999999999999877665555554
No 87
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=1.7e-30 Score=252.95 Aligned_cols=286 Identities=12% Similarity=0.084 Sum_probs=190.9
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC--CCCCCCccc---------------cccC--------C
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA--PYERPALSK---------------AYLF--------P 56 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~--~~~~~~~~~---------------~~~~--------~ 56 (433)
+..+||+|||||++|+++|.+|++.|. ..+|+|+|+. .. .|....... .+.. .
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~-~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKA-FDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTC-CSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCC-CCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 346899999999999999999999987 1239999987 21 111110000 0000 0
Q ss_pred CC----CC-------CCCCcccccCCCC-------CCCCHhHHHhCCcEEEeCceEEEEECCCC--EEEeCC---Cc---
Q 013952 57 EG----TA-------RLPGFHVCVGSGG-------ERLLPEWYKEKGIELILSTEIVRADIASK--TLLSAT---GL--- 110 (433)
Q Consensus 57 ~~----~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~---~~--- 110 (433)
.. .. .+++++....... ...+.++.++.+..+..+++|..++.... .|++.+ |.
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 00 00 0000000000000 01112233345667888889999987655 465554 55
Q ss_pred EEecceEEEccCC--CccccCCCCCCCCC------CCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHH
Q 013952 111 IFKYQILVIATGS--TVLRLTDFGVEGAD------AKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALK 182 (433)
Q Consensus 111 ~~~~d~lvlAtG~--~~~~~~~~~~~g~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~ 182 (433)
++.||+||+|||. .|+.|+ ++|.+ ...++++.++.+...+ .+++|+|||+|++|+|+|..|+
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~---i~G~~~~~~~~~g~v~~~~~~~~~~~~-------~~k~VvVvG~G~sg~e~A~~l~ 232 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPN---IKGLDEYAKAVPGSVLHSSLFREPELF-------VGESVLVVGGASSANDLVRHLT 232 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCC---CBTHHHHHHHSTTSEEEGGGCCCGGGG-------TTCCEEEECSSHHHHHHHHHHT
T ss_pred EEEeCEEEECCCCCCCCCCCC---CCChhhhhccCCccEEEecccCChhhc-------CCCEEEEEccCcCHHHHHHHHH
Confidence 7999999999998 777776 56543 1346766554443222 5899999999999999999999
Q ss_pred hCCCe-EEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE-EECCEEEEcccC
Q 013952 183 INNID-VSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRT-LEADIVVVGVGG 260 (433)
Q Consensus 183 ~~g~~-V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~-i~~d~vi~a~G~ 260 (433)
+.+.+ |+++.+.+.+ +++.||.+ ...|+++.. ++ ..|.+.+|+. +++|.||+|+|+
T Consensus 233 ~~~~~~V~l~~r~~~~----------------l~~~~i~~--~~~v~~~~~--~~--~~v~~~dG~~~~~~D~vi~atG~ 290 (447)
T 2gv8_A 233 PVAKHPIYQSLLGGGD----------------IQNESLQQ--VPEITKFDP--TT--REIYLKGGKVLSNIDRVIYCTGY 290 (447)
T ss_dssp TTSCSSEEEECTTCCS----------------CBCSSEEE--ECCEEEEET--TT--TEEEETTTEEECCCSEEEECCCB
T ss_pred HHhCCcEEEEeCCCCc----------------CCCCCeEE--ecCeEEEec--CC--CEEEECCCCEeccCCEEEECCCC
Confidence 99999 9999988754 34567774 567888864 33 2578889976 799999999999
Q ss_pred ccChhh-----hhc-cccc-CCCcEEeCCCCC---CCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhc
Q 013952 261 RPLISL-----FKG-QVAE-NKGGIETDDFFK---TSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMA 330 (433)
Q Consensus 261 ~p~~~~-----~~~-~~~~-~~g~i~vd~~~~---t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~ 330 (433)
+|++.+ ++. .... .++.+.++.+.+ ++.|++|++||+... ..+..|..||+.+|+++.+
T Consensus 291 ~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~-----------~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 291 LYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHV-----------VPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp CCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCBSS-----------CHHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccccc-----------cCchHHHHHHHHHHHHHcC
Confidence 999888 543 1111 234455555555 689999999998764 2466788999999999987
Q ss_pred cC
Q 013952 331 TE 332 (433)
Q Consensus 331 ~~ 332 (433)
..
T Consensus 360 ~~ 361 (447)
T 2gv8_A 360 RL 361 (447)
T ss_dssp SS
T ss_pred CC
Confidence 53
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.2e-29 Score=258.39 Aligned_cols=258 Identities=17% Similarity=0.215 Sum_probs=184.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
.+||+|||||+||++||..|++.|++ |+|+|++ ...+ .+... ..+++.... ......+..++++
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~---V~lie~~~~~gg-~~~~~---------~~~~~~~~~--~~~~~~~~~~~~~ 437 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQ---VTLFDAHSEIGG-QFNIA---------KQIPGKEEF--YETLRYYRRMIEV 437 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSSCT-THHHH---------TTSTTCTTH--HHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCCCCCC-eeecc---------ccCCCHHHH--HHHHHHHHHHHHH
Confidence 57999999999999999999999886 9999998 2211 11000 011111000 0001123455667
Q ss_pred CCcEEEeCceEEEEECCCCEEEeCCCcEE-ecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCC
Q 013952 84 KGIELILSTEIVRADIASKTLLSATGLIF-KYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKN 162 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~-~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~ 162 (433)
.+++++.++.+.. ..+ .||+||||||+.|+.|+ ++|.+..++++..+ . +.. ....+
T Consensus 438 ~gv~~~~~~~v~~-------------~~~~~~d~lviAtG~~p~~~~---i~G~~~~~v~~~~~---~--l~~--~~~~~ 494 (671)
T 1ps9_A 438 TGVTLKLNHTVTA-------------DQLQAFDETILASGIVPRTPP---IDGIDHPKVLSYLD---V--LRD--KAPVG 494 (671)
T ss_dssp HTCEEEESCCCCS-------------SSSCCSSEEEECCCEEECCCC---CBTTTSTTEEEHHH---H--HTS--CCCCC
T ss_pred cCCEEEeCcEecH-------------HHhhcCCEEEEccCCCcCCCC---CCCCCCCcEeeHHH---H--hhC--CCCCC
Confidence 8999998865431 124 89999999999998877 57766567776422 1 110 11257
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-------------------------------------eEEEEccCCccCCCCCCHH
Q 013952 163 GKAVVVGGGYIGLELSAALKINNI-------------------------------------DVSMVYPEPWCMPRLFTAD 205 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~-------------------------------------~V~li~~~~~~~~~~~~~~ 205 (433)
++++|||+|++|+|+|..|.+.|. +|+++.+.+..+...+++.
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~ 574 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKT 574 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTT
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccc
Confidence 899999999999999999998773 4667776665555446777
Q ss_pred HHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEECCEEEEcccCccChhhhhcccccCCCcEEeCCC
Q 013952 206 IAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDF 283 (433)
Q Consensus 206 ~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g--~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~ 283 (433)
....+.+.+++.||+++++++++++.. ++ ..+. .+| +++++|.||+|+|++|+++++..
T Consensus 575 ~~~~~~~~l~~~GV~v~~~~~v~~i~~--~~--v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~l~~~-------------- 635 (671)
T 1ps9_A 575 TGWIHRTTLLSRGVKMIPGVSYQKIDD--DG--LHVV-INGETQVLAVDNVVICAGQEPNRALAQP-------------- 635 (671)
T ss_dssp THHHHHHHHHHTTCEEECSCEEEEEET--TE--EEEE-ETTEEEEECCSEEEECCCEEECCTTHHH--------------
T ss_pred cHHHHHHHHHhcCCEEEeCcEEEEEeC--Ce--EEEe-cCCeEEEEeCCEEEECCCccccHHHHHH--------------
Confidence 778888999999999999999999974 33 2232 566 57999999999999999887642
Q ss_pred CCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHH
Q 013952 284 FKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTI 328 (433)
Q Consensus 284 ~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i 328 (433)
++...++||++|||+.... ..+..|++||..+|.||
T Consensus 636 l~~~g~~v~aiGD~~~~~~---------~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 636 LIDSGKTVHLIGGCDVAME---------LDARRAIAQGTRLALEI 671 (671)
T ss_dssp HHTTTCCEEECGGGTCCSS---------CCHHHHHHHHHHHHHHC
T ss_pred HHhcCCCEEEECCcCccCc---------hhHHHHHHHHHHHHHhC
Confidence 1123479999999987643 35888999999999986
No 89
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.96 E-value=4.2e-29 Score=246.91 Aligned_cols=297 Identities=16% Similarity=0.215 Sum_probs=187.6
Q ss_pred cCeEEEECCCHHHHHHHHHHH-HcCCCCCcEEEEcCC-CCC-------CCCC--Cc-cccccCCCCCC--CCCCcc--cc
Q 013952 5 SFKYVILGGGVSAGYAAREFA-KQGVKPGELAIISKE-VAP-------YERP--AL-SKAYLFPEGTA--RLPGFH--VC 68 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~-~~g~~~~~V~lie~~-~~~-------~~~~--~~-~~~~~~~~~~~--~~~~~~--~~ 68 (433)
++||+|||||++|+++|..|+ +.|++ |+|+|++ ... |..+ .. +..+....... ..+.+. ..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~---v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 84 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLT---TVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYI 84 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCC---EEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCC
Confidence 579999999999999999999 88886 9999997 210 1000 00 00000000000 000000 00
Q ss_pred cCCCCCCCCHhHHHhCCc--EEEeCceEEEEECCCC----EEEeCCCcEEecceEEEccC--CCccccCCCCCCCCCC--
Q 013952 69 VGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADA-- 138 (433)
Q Consensus 69 ~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lvlAtG--~~~~~~~~~~~~g~~~-- 138 (433)
........+....++.++ ++..++.|..++.+++ .|.+.+|+++.||+||+||| +.|..|+. ||.+.
T Consensus 85 ~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~i---pG~~~f~ 161 (540)
T 3gwf_A 85 TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNL---PGLDTFE 161 (540)
T ss_dssp EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCC---TTGGGCC
T ss_pred CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCC---CCccccC
Confidence 000111223444566787 7888899999987665 68888888999999999999 57887774 55431
Q ss_pred CCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc-CCC---CCCHHHHHHHH---
Q 013952 139 KNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-MPR---LFTADIAAFYE--- 211 (433)
Q Consensus 139 ~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~-~~~---~~~~~~~~~l~--- 211 (433)
..+++.....+. ....+++|+|||+|.+|+|+|..|++.+.+|+++.+.+.+ ++. .+++...+.++
T Consensus 162 g~~~~~~~~~~~-------~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~ 234 (540)
T 3gwf_A 162 GETIHTAAWPEG-------KSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADY 234 (540)
T ss_dssp SEEEEGGGCCSS-------CCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTH
T ss_pred CCEEEeecCCCc-------cccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhcc
Confidence 223333221111 0125899999999999999999999999999999998873 222 12222222221
Q ss_pred ----------------------------------------------------------------------HH--------
Q 013952 212 ----------------------------------------------------------------------GY-------- 213 (433)
Q Consensus 212 ----------------------------------------------------------------------~~-------- 213 (433)
+.
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp 314 (540)
T 3gwf_A 235 DRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDP 314 (540)
T ss_dssp HHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSH
T ss_pred HHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCH
Confidence 00
Q ss_pred -------------------------HHhcCcEEEc--CCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh
Q 013952 214 -------------------------YANKGIKIIK--GTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL 266 (433)
Q Consensus 214 -------------------------l~~~GV~v~~--~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~ 266 (433)
+.+.+|+++. ...|++|.. .+|.+++|+++++|.||+|||+++++.+
T Consensus 315 ~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~------~gv~~~dG~~~~~DvIV~ATGf~~~~~~ 388 (540)
T 3gwf_A 315 ETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA------KGVVTEDGVLHELDVLVFATGFDAVDGN 388 (540)
T ss_dssp HHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS------SEEEETTCCEEECSEEEECCCBSCSSHH
T ss_pred HHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEec------CeEEcCCCCEEECCEEEECCccCccccC
Confidence 1144788885 678888865 3588999999999999999999998854
Q ss_pred hhccccc-CCCcEEeCC--------C--CC-CCCCCeEEc-CccccccccccCcccccccHHHHHHHHHHHHHHHhcc
Q 013952 267 FKGQVAE-NKGGIETDD--------F--FK-TSADDVYAV-GDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 331 (433)
Q Consensus 267 ~~~~~~~-~~g~i~vd~--------~--~~-t~~~~vfa~-Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 331 (433)
+.. +.. ..+++.+++ + +. .+.||+|++ |..+. .. .....+..|++++++.|...
T Consensus 389 ~~~-~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~--~~--------s~~~~~e~q~~~i~~~i~~~ 455 (540)
T 3gwf_A 389 YRR-IEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP--FT--------NLPPSIETQVEWISDTIGYA 455 (540)
T ss_dssp HHT-SEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB--CS--------CHHHHHHHHHHHHHHHHHHH
T ss_pred cCc-ceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCC--Cc--------cHHHHHHHHHHHHHHHHHHH
Confidence 421 111 122333332 2 22 278999999 86554 11 23455667888888877543
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.95 E-value=2e-27 Score=235.12 Aligned_cols=189 Identities=15% Similarity=0.114 Sum_probs=113.9
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC-------CCC--CCCccccccC-CCCCCCC--CCccc--c
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA-------PYE--RPALSKAYLF-PEGTARL--PGFHV--C 68 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~-------~~~--~~~~~~~~~~-~~~~~~~--~~~~~--~ 68 (433)
.++||+|||||++|+++|..|++.|++ |+|||++ .. .|. ++........ ....... ..... .
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~---v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~ 84 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMK---VLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFA 84 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCC
Confidence 357999999999999999999999986 9999998 21 000 0000000000 0000000 00000 0
Q ss_pred cCCCCCCCCHhHHHhCCc--EEEeCceEEEEECCCC----EEEeCCCcEEecceEEEccC--CCccccCCCCCCCCCCCC
Q 013952 69 VGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADAKN 140 (433)
Q Consensus 69 ~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lvlAtG--~~~~~~~~~~~~g~~~~~ 140 (433)
........+....++.++ ++..++.|..++.+.. .|.+.+|++++||+||+||| +.|..|+.+|++... ..
T Consensus 85 ~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~-g~ 163 (545)
T 3uox_A 85 SQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRMPDIKGIDSFK-GE 163 (545)
T ss_dssp BHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---CCCTTGGGCC-SE
T ss_pred CHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcCCCCCCccccC-CC
Confidence 000011123334455666 6788889999887655 78888898999999999999 788887743332222 12
Q ss_pred EEEecC-HHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 141 IFYLRE-IDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 141 v~~~~~-~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
+++... ..+.....+ ..+..+++|+|||+|.+|+|+|..|++.+.+|+++.+.+.+
T Consensus 164 ~~h~~~~~~~~~~~~~-~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 164 SFHSSRWPTDAEGAPK-GVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp EEEGGGCCBCTTSCBS-CCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred eEEccccccccccccc-ccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 232221 111000000 00125799999999999999999999999999999998874
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.95 E-value=4.3e-27 Score=232.97 Aligned_cols=180 Identities=16% Similarity=0.199 Sum_probs=118.5
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC-------CCC--CCcc-ccccCCCCC-----CCCCCccc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP-------YER--PALS-KAYLFPEGT-----ARLPGFHV 67 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~-------~~~--~~~~-~~~~~~~~~-----~~~~~~~~ 67 (433)
..+||+|||||++|+++|..|++.|++ |+|||++ ... |.. +... ..+...... ...... .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~-~ 95 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLT---VRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEK-Y 95 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSS-S
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCC---EEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccC-C
Confidence 357999999999999999999999986 9999997 210 100 0000 000000000 000000 0
Q ss_pred ccCCCCCCCCHhHHHhCCc--EEEeCceEEEEECCCC----EEEeCCCcEEecceEEEccC--CCccccCCCCCCCCCC-
Q 013952 68 CVGSGGERLLPEWYKEKGI--ELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADA- 138 (433)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lvlAtG--~~~~~~~~~~~~g~~~- 138 (433)
..+......+...+++.++ ++..+++|..++.+.+ +|.+.+|+++.||+||+||| +.|..|+ +||.+.
T Consensus 96 ~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~p~---ipG~~~f 172 (549)
T 4ap3_A 96 ATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPA---FDGLDRF 172 (549)
T ss_dssp CBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCCCC---CTTGGGC
T ss_pred CCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCCCC---CCCcccC
Confidence 0000011223344566777 7888899999987665 78888898999999999999 7888887 455432
Q ss_pred -CCEEEecCHH-HHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 139 -KNIFYLREID-DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 139 -~~v~~~~~~~-~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
..+++..... +... ..+++|+|||+|.+|+|+|..|++.+.+|+++.+.+.+
T Consensus 173 ~g~~~~~~~~~~~~~~-------~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 173 TGDIVHTARWPHDGVD-------FTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CSEEEEGGGCCTTCCC-------CBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCceEEeccccccccc-------cCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 2234332211 1111 15899999999999999999999999999999998874
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.93 E-value=1.1e-25 Score=223.87 Aligned_cols=299 Identities=13% Similarity=0.174 Sum_probs=180.9
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC--CC-CCCccccccCCCCCCCCC---------Ccccc--
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP--YE-RPALSKAYLFPEGTARLP---------GFHVC-- 68 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~--~~-~~~~~~~~~~~~~~~~~~---------~~~~~-- 68 (433)
..+||+|||||++|+++|..|++.|++ |+|+|++ ... +. .+.....+........+. .+...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~ 91 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRS---VHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYA 91 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccC
Confidence 358999999999999999999999987 9999998 210 00 000000000000000000 00000
Q ss_pred cCCCCCCCCHhHHHhCC--cEEEeCceEEEEECCCC----EEEeCCCcEEecceEEEccC--CCccccCCCCCCCCCC-C
Q 013952 69 VGSGGERLLPEWYKEKG--IELILSTEIVRADIASK----TLLSATGLIFKYQILVIATG--STVLRLTDFGVEGADA-K 139 (433)
Q Consensus 69 ~~~~~~~~~~~~~~~~~--v~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~lvlAtG--~~~~~~~~~~~~g~~~-~ 139 (433)
........+....++.+ .++..+++|..++.++. +|.+.+|+++++|+||+||| +.|..|+ ++|.+. .
T Consensus 92 ~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~---i~G~~~f~ 168 (542)
T 1w4x_A 92 SQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPN---FPGLKDFA 168 (542)
T ss_dssp BHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCC---CTTGGGCC
T ss_pred CHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCC---CCCcccCC
Confidence 00000011122234444 56888889998876432 57778888899999999999 4677776 455431 2
Q ss_pred C-EEEecCHH-HHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-CC---CCCHHHHH-----
Q 013952 140 N-IFYLREID-DADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-PR---LFTADIAA----- 208 (433)
Q Consensus 140 ~-v~~~~~~~-~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~-~~---~~~~~~~~----- 208 (433)
+ +++..... +.. +..+++|+|||+|.+|+|++..+++.+.+|+++.+.+.+. +. .+.+...+
T Consensus 169 G~~~hs~~~~~~~~-------~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~ 241 (542)
T 1w4x_A 169 GNLYHTGNWPHEPV-------DFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKR 241 (542)
T ss_dssp SEEEEGGGCCSSCC-------CCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTT
T ss_pred CceEECCCCCCchh-------ccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhh
Confidence 2 33322111 100 1258999999999999999999999999999999877652 21 01111110
Q ss_pred ------------------------------------------------------------------HHHHH---------
Q 013952 209 ------------------------------------------------------------------FYEGY--------- 213 (433)
Q Consensus 209 ------------------------------------------------------------------~l~~~--------- 213 (433)
.+++.
T Consensus 242 ~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (542)
T 1w4x_A 242 YAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPE 321 (542)
T ss_dssp HHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHH
T ss_pred CHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHH
Confidence 00111
Q ss_pred --------------------------HHhcCcEEE--cCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 214 --------------------------YANKGIKII--KGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 214 --------------------------l~~~GV~v~--~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
+.+.+|+++ .+..|+++.. .+|.++| +++++|.||+|||+++++.
T Consensus 322 ~~~~l~P~~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~------~gv~~~d-~~~~~D~ii~atG~~~~~~ 394 (542)
T 1w4x_A 322 VAERLVPKGYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITP------RGVRTSE-REYELDSLVLATGFDALTG 394 (542)
T ss_dssp HHHHHSCCSSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECS------SEEEESS-CEEECSEEEECCCCCCTTH
T ss_pred HHHhcCCCCCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcC------CeEEeCC-eEEecCEEEEcCCcccccc
Confidence 111346665 3567888754 3578888 8999999999999999877
Q ss_pred hhhccccc-CCCcEEeCCCC----------CC-CCCCeEEc-CccccccccccCcccccccH-HHHHHHHHHHHHHHhcc
Q 013952 266 LFKGQVAE-NKGGIETDDFF----------KT-SADDVYAV-GDVATFPMKLYREMRRVEHV-DHARKSAEQAVKTIMAT 331 (433)
Q Consensus 266 ~~~~~~~~-~~g~i~vd~~~----------~t-~~~~vfa~-Gd~~~~~~~~~~~~~~~~~~-~~A~~~g~~aa~~i~~~ 331 (433)
++.. +.+ ..+++.+++++ .. +.||+|++ |+.+.... .++ ..|..|++.++++|...
T Consensus 395 ~~~~-~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~---------~~~~~~~e~q~~~ia~~i~~~ 464 (542)
T 1w4x_A 395 ALFK-IDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSAL---------SNMLVSIEQHVEWVTDHIAYM 464 (542)
T ss_dssp HHHT-SEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGG---------SCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCc-eeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCccc---------ccHHHHHHHHHHHHHHHHHHH
Confidence 6542 222 23344444322 22 66778776 77653211 334 67788999999998764
Q ss_pred C
Q 013952 332 E 332 (433)
Q Consensus 332 ~ 332 (433)
.
T Consensus 465 ~ 465 (542)
T 1w4x_A 465 F 465 (542)
T ss_dssp H
T ss_pred H
Confidence 3
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.90 E-value=3.5e-23 Score=175.72 Aligned_cols=158 Identities=19% Similarity=0.163 Sum_probs=131.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC--------CC-----CHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR--------LF-----TADIAAFYEGYYANKGIKIIKGTVAVGF 230 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~--------~~-----~~~~~~~l~~~l~~~GV~v~~~~~v~~i 230 (433)
+++|||+|++|+++|..|.+.|.+|+++++.+..+.. .+ ++++.+.+.+.+++.||+++++ +|+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i 81 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VVKGV 81 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEE
Confidence 6899999999999999999999999999988765521 12 4788999999999999999999 99999
Q ss_pred EecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhhhcccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccc
Q 013952 231 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRR 310 (433)
Q Consensus 231 ~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~ 310 (433)
+.++++ ..+.+.+| ++++|.||+|+|.+|+. .-..+++.++|.+.||+++||+.|+|||+|||+..+.
T Consensus 82 ~~~~~~--~~v~~~~g-~i~ad~vI~A~G~~~~~-~~~~g~~~~~g~i~vd~~~~t~~~~i~a~GD~~~~~~-------- 149 (180)
T 2ywl_A 82 RDMGGV--FEVETEEG-VEKAERLLLCTHKDPTL-PSLLGLTRRGAYIDTDEGGRTSYPRVYAAGVARGKVP-------- 149 (180)
T ss_dssp EECSSS--EEEECSSC-EEEEEEEEECCTTCCHH-HHHHTCCEETTEECCCTTCBCSSTTEEECGGGGTCCS--------
T ss_pred EEcCCE--EEEEECCC-EEEECEEEECCCCCCCc-cccCCCCccCceEEeCCCCCcCCCCEEEeecccCcch--------
Confidence 873333 57888888 89999999999999864 1223454557789999999999999999999998753
Q ss_pred cccHHHHHHHHHHHHHHHhccCCCC
Q 013952 311 VEHVDHARKSAEQAVKTIMATEGGK 335 (433)
Q Consensus 311 ~~~~~~A~~~g~~aa~~i~~~~~~~ 335 (433)
+++..|..+|+.+|.||.+...+.
T Consensus 150 -~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 150 -GHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred -hhHHHHHHhHHHHHHHHHHHhhhc
Confidence 367889999999999998765443
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.83 E-value=7.7e-19 Score=172.46 Aligned_cols=286 Identities=13% Similarity=0.067 Sum_probs=160.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCC-----------CcEEEEcCC-CCCCCCCCc-cccccCCCCCCCC-----CCcc
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKP-----------GELAIISKE-VAPYERPAL-SKAYLFPEGTARL-----PGFH 66 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~-----------~~V~lie~~-~~~~~~~~~-~~~~~~~~~~~~~-----~~~~ 66 (433)
.|||||||+||+||++|..|.+.+.+. ...+.+|+. ...|...++ .+.-+.......+ |..+
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~ 118 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSS 118 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCc
Confidence 489999999999999999998865431 235677777 333332211 1100000000000 0000
Q ss_pred c---------------ccCCC-------CCCCCHhHHHhCCcEEEeCceEEEEECCC----------CEEEeCCC-----
Q 013952 67 V---------------CVGSG-------GERLLPEWYKEKGIELILSTEIVRADIAS----------KTLLSATG----- 109 (433)
Q Consensus 67 ~---------------~~~~~-------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~----------~~v~~~~~----- 109 (433)
+ ..... ...++....++.+..+.++++|+++.+.. .+|++.++
T Consensus 119 ~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~ 198 (501)
T 4b63_A 119 FTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEI 198 (501)
T ss_dssp TSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCE
T ss_pred cchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceE
Confidence 0 00000 00111222234566788888999886432 24555433
Q ss_pred cEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHH--HhcCCCcEEEECCCHHHHHHHHHHHhC--C
Q 013952 110 LIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAI--KAKKNGKAVVVGGGYIGLELSAALKIN--N 185 (433)
Q Consensus 110 ~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~--~~~~~~~v~ViG~G~~g~e~a~~l~~~--g 185 (433)
+++.+++||+|||..|..|.. .+. ...+++.....+... .+ ....+|+|+|||+|.+|+|++..|++. +
T Consensus 199 ~~~~ar~vVlatG~~P~iP~~---~~~-~g~v~Hss~y~~~~~---~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~ 271 (501)
T 4b63_A 199 SARRTRKVVIAIGGTAKMPSG---LPQ-DPRIIHSSKYCTTLP---ALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPN 271 (501)
T ss_dssp EEEEEEEEEECCCCEECCCTT---SCC-CTTEEEGGGHHHHHH---HHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTT
T ss_pred EEEEeCEEEECcCCCCCCCCC---CCC-Ccceeeccccccchh---hccccccCCcEEEEECCcHHHHHHHHHHHhcCCC
Confidence 368999999999998887764 332 246777655443211 11 123689999999999999999999864 6
Q ss_pred CeEEEEccCCccCCCC--------CCHHH-----------HH--------------------HHHH-HHHh---------
Q 013952 186 IDVSMVYPEPWCMPRL--------FTADI-----------AA--------------------FYEG-YYAN--------- 216 (433)
Q Consensus 186 ~~V~li~~~~~~~~~~--------~~~~~-----------~~--------------------~l~~-~l~~--------- 216 (433)
.+|+++.|.+.+.+.. +.++. .+ .+.+ .+++
T Consensus 272 ~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~ 351 (501)
T 4b63_A 272 SRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQ 351 (501)
T ss_dssp CEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGG
T ss_pred ceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccc
Confidence 8999999987654321 11111 11 1111 1111
Q ss_pred cCcEEEcCCeEEEEEecCC-CcE-----------EEEEeCCCcEEECCEEEEcccCccChh-hhhc---cccc-CCCcEE
Q 013952 217 KGIKIIKGTVAVGFTTNAD-GEV-----------KEVKLKDGRTLEADIVVVGVGGRPLIS-LFKG---QVAE-NKGGIE 279 (433)
Q Consensus 217 ~GV~v~~~~~v~~i~~~~~-g~~-----------~~v~~~~g~~i~~d~vi~a~G~~p~~~-~~~~---~~~~-~~g~i~ 279 (433)
....+..+..+..+..... +++ ..+.+.+|+++++|.||+|||++|+.. ++.. .+.. .+|.+.
T Consensus 352 ~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~~~~~~l~~d~~g~~~ 431 (501)
T 4b63_A 352 WQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLLSKVQHLRPTGQDQWK 431 (501)
T ss_dssp CSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHTGGGGGGSSTTCCSCC
T ss_pred cceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhcchhhhcCcCcCCCee
Confidence 1124555655655543221 111 234567788999999999999998864 2222 2222 467788
Q ss_pred eCCCCCC--------CCCCeEEcCcc
Q 013952 280 TDDFFKT--------SADDVYAVGDV 297 (433)
Q Consensus 280 vd~~~~t--------~~~~vfa~Gd~ 297 (433)
|+.+++. ..++||+.|-+
T Consensus 432 v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 432 PHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp BCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred eCCCcEEeecCCccCCCceEEecCCC
Confidence 8866542 24679999954
No 95
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.73 E-value=3.9e-19 Score=173.28 Aligned_cols=193 Identities=13% Similarity=0.097 Sum_probs=115.0
Q ss_pred HHHhCCcEEEeCceEEEEECCCCEE---EeC-CCcEEecceEEEccCCCccccCCCCC-CCCCCCCEEEecCHHHHHHHH
Q 013952 80 WYKEKGIELILSTEIVRADIASKTL---LSA-TGLIFKYQILVIATGSTVLRLTDFGV-EGADAKNIFYLREIDDADKLV 154 (433)
Q Consensus 80 ~~~~~~v~~~~~~~v~~i~~~~~~v---~~~-~~~~~~~d~lvlAtG~~~~~~~~~~~-~g~~~~~v~~~~~~~~~~~~~ 154 (433)
.+++.+++++.++.+ .+..++..+ ... ++.++.+|.+|+|||+.+..++...- ++... +.+.-+.+.-
T Consensus 128 ~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tG------dgi~~a~~aG 200 (472)
T 2e5v_A 128 LAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIG------DGMAIAFKAG 200 (472)
T ss_dssp HHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSSSBSSCTTCSC------HHHHHHHHTT
T ss_pred HHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCccccCCCCCch------HHHHHHHHcC
Confidence 345679999999889 887665543 332 23357899999999998866542110 11110 0010010000
Q ss_pred HHHHhc---CC-CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHH--------HHHHHHHHHHhcCcEEE
Q 013952 155 EAIKAK---KN-GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTAD--------IAAFYEGYYANKGIKII 222 (433)
Q Consensus 155 ~~~~~~---~~-~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~--------~~~~l~~~l~~~GV~v~ 222 (433)
..+.+. +. ..++++|+| +++++..+...|..+ +..+.+++++.+ +++ +.+.+.+.+++.|. ++
T Consensus 201 a~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~~~G~~~-v~~~g~rf~~~~-~~~~el~~rd~v~~~i~~~~~~~~~-v~ 275 (472)
T 2e5v_A 201 TILADMEFVQFHPTVTSLDGE--VFLLTETLRGEGAQI-INENGERFLFNY-DKRGELAPRDILSRAIYIEMLKGHK-VF 275 (472)
T ss_dssp CCEECTTCEEEEEEEECGGGC--CEECCTHHHHTTCEE-EETTCCCGGGGT-CTTGGGSCHHHHHHHHHHHHHHTCC-EE
T ss_pred CCEeCCcceEEEeEEEccCCC--ceeeehhhcCCceEE-ECCCCCCCCccC-CcccCcCchhHHHHHHHHHHHhCCc-EE
Confidence 000000 11 133455666 888888888889877 778888888653 332 35566666666653 33
Q ss_pred cCCeEEEEEecCCCcEEEEEeCCCcEEE-CCEEEEcccCccChhhhhcc--cccCCCcEEeCCCCCCCCCCeEEcCcccc
Q 013952 223 KGTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVGGRPLISLFKGQ--VAENKGGIETDDFFKTSADDVYAVGDVAT 299 (433)
Q Consensus 223 ~~~~v~~i~~~~~g~~~~v~~~~g~~i~-~d~vi~a~G~~p~~~~~~~~--~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~ 299 (433)
++... + +. +. +.++ .+.++++.|..|+ ++++.. .....|+|.||+++||++|+|||+|||++
T Consensus 276 ld~~~--~----~~------~~--~~~~~~~~~~~~~G~dp~-~~i~v~p~~~~~~GGI~vd~~~~t~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 276 IDLSK--I----ED------FE--RKFPVVAKYLARHGHNYK-VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSD 340 (472)
T ss_dssp EECTT--C----TT------HH--HHCHHHHHHHHHTTCCTT-SCEECEEEEEEESCEEECCTTCBCSSBTEEECGGGEE
T ss_pred Eeccc--h----HH------HH--HHhHHHHHHHHHhCcCcc-cceEeehhhceeCCCeEECCCCccccCCEEecchhcc
Confidence 22110 0 00 00 1232 3667778899998 554321 12257999999999999999999999998
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.63 E-value=1.5e-15 Score=133.77 Aligned_cols=156 Identities=15% Similarity=0.165 Sum_probs=112.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-----------------cCCCC------CCHHHHHHHHHHHHhc-C
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------------CMPRL------FTADIAAFYEGYYANK-G 218 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~-----------------~~~~~------~~~~~~~~l~~~l~~~-G 218 (433)
..|+|||+|+.|+++|..|++.|.+|+++++... +...+ ....+.+.+.+.+++. |
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~~g 83 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGLRP 83 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcCCC
Confidence 4799999999999999999999999999988621 00000 1236777888888887 9
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh--------------------hh----hcccccC
Q 013952 219 IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS--------------------LF----KGQVAEN 274 (433)
Q Consensus 219 V~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~--------------------~~----~~~~~~~ 274 (433)
++++ +++|+++.. +++++..+.+.+|+++++|.||+|+|..++.. +. +.++...
T Consensus 84 v~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~ 161 (232)
T 2cul_A 84 LHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEEAGRLSEASYPDLLEDLSRLGFRFV 161 (232)
T ss_dssp EEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEESEEETTEECCSHHHHHHHHTTCCEE
T ss_pred cEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCCCCCCcccchhhhCHHHHhCCCeEE
Confidence 9999 568999986 35666678888888899999999999844322 21 1122221
Q ss_pred CCc----------------EEeC-------CCCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhcc
Q 013952 275 KGG----------------IETD-------DFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMAT 331 (433)
Q Consensus 275 ~g~----------------i~vd-------~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 331 (433)
.+. ..+. ...+|++|+||++|||+ .. ..+..|..||+.+|.+|...
T Consensus 162 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~----------g~~~~~~~~g~~~a~~i~~~ 230 (232)
T 2cul_A 162 EREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-RE----------GDYARMSEEGKRLAEHLLHE 230 (232)
T ss_dssp EEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SC----------CCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cC----------ccHHHHHHHHHHHHHHHHhh
Confidence 100 0111 01236999999999999 43 35677899999999999864
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.7e-18 Score=161.09 Aligned_cols=254 Identities=15% Similarity=0.025 Sum_probs=142.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHH--cCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 5 SFKYVILGGGVSAGYAAREFAK--QGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~--~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
.+||+|||||||||+||.+|++ .|++ |+|+|+...+...+ ... .+.++... ........++
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~---V~viEk~~~~GG~~------~~~--~~~~~~~~------l~~~~~~~~~ 127 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESSVAPGGGS------WLG--GQLFSAMV------MRKPAHLFLQ 127 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSSSSCCTTT------TCC--STTCCCEE------EETTTHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCe---EEEEECCCCCCceE------EeC--CccCCHHH------HHHHHHHHHH
Confidence 5799999999999999999975 4777 99999982221111 111 01111111 1234456677
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCC---CCCEEEecCHHHHHHHHHHHHh
Q 013952 83 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGAD---AKNIFYLREIDDADKLVEAIKA 159 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~---~~~v~~~~~~~~~~~~~~~~~~ 159 (433)
+.++++..+.. .....+..+++++..++.+.. +|.. ...+..+...... .
T Consensus 128 e~Gv~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~--------~ 180 (326)
T 3fpz_A 128 ELEIPYEDEGD----------------YVVVKHAALFISTVLSKVLQL---PNVKLFNATCVEDLVTRPPT--------E 180 (326)
T ss_dssp HTTCCCEECSS----------------EEEESCHHHHHHHHHHHHHTS---TTEEEETTEEEEEEEEESSC--------S
T ss_pred HcCCEEEECCc----------------ceecceeEEEEcchhhhcccc---ccceeecccccceeeccCCc--------c
Confidence 78887655421 123344555666666555553 3322 1112111111100 1
Q ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013952 160 KKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 239 (433)
Q Consensus 160 ~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 239 (433)
..+++++++|+|.++++.|..+...+.++++..+........ . .... .. .+..... .++..
T Consensus 181 ~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~-~----------~~~~-~~-----~~~~~~g-~~~~~- 241 (326)
T 3fpz_A 181 KGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTR-D----------LSQK-HG-----VILSTTG-HDGPF- 241 (326)
T ss_dssp SSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSB-C----------TTSC-CC-----EEEECCC-SCSSS-
T ss_pred cCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccc-c----------ceee-cc-----eEEEEec-ceeeE-
Confidence 147899999999999999999999999999887654432210 0 0000 00 1111111 01100
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhhhcccccCCCcEEeCCCCCCCCCCeEEcCccccccccccCcccccccHHHHHH
Q 013952 240 EVKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARK 319 (433)
Q Consensus 240 ~v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~ 319 (433)
. .......+.+|.++.+.|.+|..... ..+.+++|+.++|+.|+|||+||++...+..+.. -+....++.
T Consensus 242 ~-~~~~~~~~~~~~~~~~~g~~~~~~~~------~e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~rm---Gp~~g~mi~ 311 (326)
T 3fpz_A 242 G-AFCAKRIVDIDQNQKLGGMKGLDMNH------AEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRM---GPTFGAMAL 311 (326)
T ss_dssp C-SHHHHHHHHHCTTCCCCCCCCBCHHH------HHHHHHHHCEECTTSBTEEECTHHHHHHHTCCBC---CSCCHHHHH
T ss_pred e-ecceeEEEecCceeeecceecccccc------cCCeEEECCCeEECCCCEEEEchHhccccCCCcC---chHHHHHHH
Confidence 0 00001234566666677776643322 2246777888999999999999998643321110 023344567
Q ss_pred HHHHHHHHHhcc
Q 013952 320 SAEQAVKTIMAT 331 (433)
Q Consensus 320 ~g~~aa~~i~~~ 331 (433)
.|+.||+.|...
T Consensus 312 SG~~AAe~I~~~ 323 (326)
T 3fpz_A 312 SGVHAAEQILKH 323 (326)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 899999998764
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.59 E-value=3.2e-16 Score=149.30 Aligned_cols=120 Identities=17% Similarity=0.254 Sum_probs=73.7
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--------CCCCccc------cccCCCCCCCC----
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPY--------ERPALSK------AYLFPEGTARL---- 62 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~--------~~~~~~~------~~~~~~~~~~~---- 62 (433)
|| +++||+|||||++|+++|..|+++|.+ |+|+|+...+. .+|.+.. .++.. .....
T Consensus 1 MM-~~~dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~-~~~~~~~~l 75 (401)
T 2gqf_A 1 MS-QYSENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQ-NPHFVKSAL 75 (401)
T ss_dssp CE-EECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECS-CTTSTHHHH
T ss_pred CC-CCCCEEEECCcHHHHHHHHHHHhCCCC---EEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccC-CHHHHHHHH
Confidence 66 469999999999999999999999987 99999982110 1111110 00000 00000
Q ss_pred --------------CCccccc-----------CCCCCCCCHhHHHhCCcEEEeCceEEEEECC----CC--EEEeCCCcE
Q 013952 63 --------------PGFHVCV-----------GSGGERLLPEWYKEKGIELILSTEIVRADIA----SK--TLLSATGLI 111 (433)
Q Consensus 63 --------------~~~~~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~----~~--~v~~~~~~~ 111 (433)
.+..... .......+.+.+++.|++++.++.|..+..+ +. .|.+.++ +
T Consensus 76 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~ 154 (401)
T 2gqf_A 76 ARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-Q 154 (401)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-E
T ss_pred HhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-E
Confidence 0000000 0000112334456679999999999988754 33 3555555 7
Q ss_pred EecceEEEccCCCcc
Q 013952 112 FKYQILVIATGSTVL 126 (433)
Q Consensus 112 ~~~d~lvlAtG~~~~ 126 (433)
+++|+||+|||+.+.
T Consensus 155 i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 155 WQCKNLIVATGGLSM 169 (401)
T ss_dssp EEESEEEECCCCSSC
T ss_pred EECCEEEECCCCccC
Confidence 999999999998773
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.35 E-value=1.1e-12 Score=126.59 Aligned_cols=94 Identities=19% Similarity=0.231 Sum_probs=71.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEccc--------CccChhhhhc-ccc-
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--------GRPLISLFKG-QVA- 272 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G--------~~p~~~~~~~-~~~- 272 (433)
+..+...+.+.+++.| +++++++|++|+.++++ ..|.+.+|++++||.||+|+| +.|+...... .+.
T Consensus 203 ~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~ 279 (431)
T 3k7m_X 203 SNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDV--VNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEE 279 (431)
T ss_dssp TTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSS--EEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCe--EEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHh
Confidence 4445556666677778 99999999999874333 468888888899999999999 8888764422 121
Q ss_pred -cCCCcEEeCCCCCCCCCCeEEcCcccc
Q 013952 273 -ENKGGIETDDFFKTSADDVYAVGDVAT 299 (433)
Q Consensus 273 -~~~g~i~vd~~~~t~~~~vfa~Gd~~~ 299 (433)
.....++|+..++++.+++|+.||+..
T Consensus 280 ~~~~~~~kv~~~~~~~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 280 GHGGQGLKILIHVRGAEAGIECVGDGIF 307 (431)
T ss_dssp CCCCCEEEEEEEEESCCTTEEEEBSSSS
T ss_pred CCCcceEEEEEEECCCCcCceEcCCCCE
Confidence 134569999999999999999999843
No 100
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.35 E-value=3.4e-12 Score=115.89 Aligned_cols=168 Identities=15% Similarity=0.104 Sum_probs=117.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEccCCccCCC-------------------------------------CCC
Q 013952 162 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWCMPR-------------------------------------LFT 203 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~-g~~V~li~~~~~~~~~-------------------------------------~~~ 203 (433)
...|+|||+|++|+.+|..|++. |.+|+++++.+.+... ...
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 35799999999999999999997 9999999987643210 012
Q ss_pred HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeC---------CC-----cEEECCEEEEcccCccChhhhh
Q 013952 204 ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLK---------DG-----RTLEADIVVVGVGGRPLISLFK 268 (433)
Q Consensus 204 ~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~---------~g-----~~i~~d~vi~a~G~~p~~~~~~ 268 (433)
.++...+.+.+.+ .||+++++++|.++.. +++++..+.+. ++ .++++|.||+|+|..++...+.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 4555566666665 7999999999999986 35555566552 22 5799999999999877653221
Q ss_pred ------cc--ccc-CCCcEEeCC-------CCCCCCCCeEEcCccccccccccCcccccccHHHHHHHHHHHHHHHhccC
Q 013952 269 ------GQ--VAE-NKGGIETDD-------FFKTSADDVYAVGDVATFPMKLYREMRRVEHVDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 269 ------~~--~~~-~~g~i~vd~-------~~~t~~~~vfa~Gd~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~~~~ 332 (433)
.+ ... ...++.+|. +.+++.|++|++|+++... ++.++..+.+..+..+|+.+|.+|...+
T Consensus 198 ~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~---~g~~~~gp~~~~~~~sG~~~a~~i~~~l 274 (284)
T 1rp0_A 198 VKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEI---DGAPRMGPTFGAMMISGQKAGQLALKAL 274 (284)
T ss_dssp HHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHHHH---HTCEECCSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehhhh---cCCCCcChHHHHHHHhHHHHHHHHHHHh
Confidence 11 111 122333332 3456789999999986542 2333333567788899999999998865
Q ss_pred C
Q 013952 333 G 333 (433)
Q Consensus 333 ~ 333 (433)
.
T Consensus 275 ~ 275 (284)
T 1rp0_A 275 G 275 (284)
T ss_dssp T
T ss_pred h
Confidence 4
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.27 E-value=6.1e-11 Score=116.91 Aligned_cols=156 Identities=17% Similarity=0.175 Sum_probs=94.1
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-C-CCCCCCCccccccCCC----CCCCCCC----------ccc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-V-APYERPALSKAYLFPE----GTARLPG----------FHV 67 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~-~~~~~~~~~~~~~~~~----~~~~~~~----------~~~ 67 (433)
..+||||||||+||++||..|++.|.+ |+|||+. . .....|..+.+..... ....+.+ ..+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~k---VlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAK---TAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCC---EEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 358999999999999999999999987 9999987 2 1111222211110000 0000000 000
Q ss_pred c-----cCC------------CCCCCCHhHHHh-CCcEEEeCceEEEEECCCCE---EEeCCCcEEecceEEEccCCCcc
Q 013952 68 C-----VGS------------GGERLLPEWYKE-KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVL 126 (433)
Q Consensus 68 ~-----~~~------------~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~~~~ 126 (433)
. .+. .....+.+.+++ .+++++. ..|..+..++.. |.+.+|.++.++.+|+|||+.+.
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~-~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQ-EEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-SCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEE-eEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 0 000 000112233445 5899965 589888765543 66778889999999999999876
Q ss_pred ccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEE
Q 013952 127 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMV 191 (433)
Q Consensus 127 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li 191 (433)
.+. ++|.. .+. +.+ .|+.++.+++..|.+.|.++..+
T Consensus 182 ~~~---~~G~~---~~~------------------~Gr----~G~~~A~~la~~L~~lG~~v~~l 218 (637)
T 2zxi_A 182 GVI---YIGDK---MIP------------------GGR----LGEPRSEGLSDFYRRFDFPLIRF 218 (637)
T ss_dssp CEE---EETTE---EEE------------------CSB----TTBCCBCTHHHHHHHTTCCCEEE
T ss_pred Cce---eccce---ecC------------------CCC----CCchhHHHHHHHHHhcCCceEEe
Confidence 554 34432 111 122 23567788999999998877654
No 102
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.22 E-value=6.1e-10 Score=105.90 Aligned_cols=57 Identities=18% Similarity=0.303 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC-CC--cEEECCEEEEcccCc
Q 013952 204 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-DG--RTLEADIVVVGVGGR 261 (433)
Q Consensus 204 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~-~g--~~i~~d~vi~a~G~~ 261 (433)
..+.+.+.+.+++.|+++++++++..+.. +++.+..+... ++ .++.+|.||-|.|..
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 34555667777888999999999999876 45555444432 23 368899999999963
No 103
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.22 E-value=1.6e-10 Score=108.94 Aligned_cols=59 Identities=15% Similarity=0.245 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC--cEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG--RTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g--~~i~~d~vi~a~G~~p 262 (433)
+..+.+.+.+.+++.|++++++++|+++..++++ ...|.+.+| .++.+|.||+|+|...
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEG-GFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-SEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCc-eEEEEECCCceeEEEeCEEEECCCcch
Confidence 5688889999999999999999999999874333 245788887 4899999999999764
No 104
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.19 E-value=4.7e-11 Score=100.55 Aligned_cols=109 Identities=18% Similarity=0.196 Sum_probs=74.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccc-cCCCCCCCCHhHHHhC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVC-VGSGGERLLPEWYKEK 84 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 84 (433)
+|++|||||++|+.+|..|++.|.+ |+|+|+......+.. .....++++.. .+......+.+.+++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~---v~lie~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 69 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLK---VLVLDGGRSKVKGVS---------RVPNYPGLLDEPSGEELLRRLEAHARRY 69 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECSCCTTTTCS---------CCCCSTTCTTCCCHHHHHHHHHHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCCcccCch---------hhhccCCCcCCCCHHHHHHHHHHHHHHc
Confidence 6999999999999999999999987 999999821111100 00111221000 0011123345566778
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
+++++.+ .+..++.++. .+.+.++ ++++|.+|+|+|..|..+
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~ 113 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLP 113 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHH
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCcc
Confidence 9999999 9988886543 5666777 899999999999988543
No 105
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.16 E-value=2.8e-11 Score=121.07 Aligned_cols=37 Identities=32% Similarity=0.306 Sum_probs=33.1
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcC--CCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQG--VKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g--~~~~~V~lie~~ 40 (433)
|....+||||||||+||++||..|++.| .+ |+|||+.
T Consensus 1 m~~~~~DVvIVG~G~AGl~aAl~la~~G~~~~---V~vlEk~ 39 (602)
T 1kf6_A 1 MQTFQADLAIVGAGGAGLRAAIAAAQANPNAK---IALISKV 39 (602)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHHHHCTTCC---EEEEESS
T ss_pred CCcccCCEEEECCCHHHHHHHHHHHhcCCCCc---EEEEeCC
Confidence 4444689999999999999999999998 76 9999997
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.15 E-value=3e-11 Score=115.37 Aligned_cols=120 Identities=24% Similarity=0.306 Sum_probs=71.6
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCC--------CCCCccc------cccCCCCCCCC----
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPY--------ERPALSK------AYLFPEGTARL---- 62 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~--------~~~~~~~------~~~~~~~~~~~---- 62 (433)
||+.++||+|||||++|++||..|+++|.+ |+|+|+...+. .++.+.. .++. ......
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~-~~~~~~~~~l 98 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLS-GNPHFCKSAL 98 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEE-SSTTTTHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhh-cCHHHHHHHH
Confidence 677789999999999999999999999987 99999982111 0111000 0000 000000
Q ss_pred --------------CCcccccCC-----------CCCCCCHhHHHhCCcEEEeCceEEEEECCCC--EEEeCCCcEEecc
Q 013952 63 --------------PGFHVCVGS-----------GGERLLPEWYKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQ 115 (433)
Q Consensus 63 --------------~~~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d 115 (433)
.+....... .....+.+.+++.|++++.++.|..+..++. .|.+.++ ++++|
T Consensus 99 ~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad 177 (417)
T 3v76_A 99 ARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAA 177 (417)
T ss_dssp HHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEES
T ss_pred HhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEee
Confidence 000000000 0011233445567999999999999876554 4556666 89999
Q ss_pred eEEEccCCCc
Q 013952 116 ILVIATGSTV 125 (433)
Q Consensus 116 ~lvlAtG~~~ 125 (433)
+||+|||..+
T Consensus 178 ~VIlAtG~~S 187 (417)
T 3v76_A 178 SLVVASGGKS 187 (417)
T ss_dssp EEEECCCCSS
T ss_pred EEEECCCCcc
Confidence 9999999875
No 107
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.11 E-value=1.3e-10 Score=115.02 Aligned_cols=157 Identities=16% Similarity=0.199 Sum_probs=92.7
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-C-CCCCCCCccccccCCC----CCCCCCC----------ccc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-V-APYERPALSKAYLFPE----GTARLPG----------FHV 67 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~-~~~~~~~~~~~~~~~~----~~~~~~~----------~~~ 67 (433)
..+||||||||+||++||..|++.|.+ |+|||+. . .....|..+.+..... ....+.+ ..+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQ---TLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCC---EEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 358999999999999999999999987 9999987 2 2222222221111000 0000000 000
Q ss_pred c-----cCC------------CCCCCCHhHHHh-CCcEEEeCceEEEEECCCC---EEEeCCCcEEecceEEEccCCCcc
Q 013952 68 C-----VGS------------GGERLLPEWYKE-KGIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVL 126 (433)
Q Consensus 68 ~-----~~~------------~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lvlAtG~~~~ 126 (433)
. .+. .....+.+.+++ .|++++. ..|..+..++. .|.+.+|.++.+|.||+|||+.+.
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~-~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQ-QAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEE-EEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 0 000 000112334445 5899965 58988876554 356677888999999999999876
Q ss_pred ccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEc
Q 013952 127 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVY 192 (433)
Q Consensus 127 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~ 192 (433)
.+. ++|... + .+.+ +| +.++++++..|.+.|.+|+.+.
T Consensus 183 ~~~---i~G~~~---~------------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~ 220 (651)
T 3ces_A 183 GKI---HIGLDN---Y------------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLK 220 (651)
T ss_dssp CEE---ECC--------------------------------------CCHHHHHHHTTTCCEEEEC
T ss_pred Ccc---ccCccc---C------------------CCCC---cc-chhhhHHHHHHHhcCCeEEEec
Confidence 655 344321 0 1223 46 7889999999999999998874
No 108
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.11 E-value=6e-10 Score=105.60 Aligned_cols=58 Identities=22% Similarity=0.316 Sum_probs=49.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
+..+.+.+.+.+++.|++++.+++|+++.. +++.+..|.+.+| ++.+|.||+|+|...
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLI-ENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEE-ECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 567888889999999999999999999987 3455555888877 799999999999764
No 109
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.06 E-value=2e-09 Score=103.96 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCC---eEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGT---VAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~---~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
+..+...+.+.+++.|+++++++ +|+++.. +++.+..|.+.+|+++.||.||+|+|..
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCC
Confidence 46788899999999999999999 9999987 4566767999999889999999999964
No 110
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.03 E-value=4.1e-10 Score=98.83 Aligned_cols=112 Identities=16% Similarity=0.135 Sum_probs=70.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCccccc----CC---CCCCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCV----GS---GGERL 76 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~ 76 (433)
++||+|||||++|+++|..|++.|.+ |+|||+. .... .+... .+.... ...+...+ +. .....
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~---v~lie~~~~~~G-~~~~~--~~~~~~---~~~~~~~~~d~~g~~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVR---VGLLTQSLDAVM-MPFLP--PKPPFP---PGSLLERAYDPKDERVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTT-CCSSC--CCSCCC---TTCHHHHHCCTTCCCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCCCcCC-cccCc--cccccc---hhhHHhhhccCCCCCHHHHHHH
Confidence 68999999999999999999999987 9999997 2111 00000 000000 00000000 00 00122
Q ss_pred CHhHHHhC-CcEEEeCceEEEEECCCCE---EEeCCCcEEecceEEEccCCCcc
Q 013952 77 LPEWYKEK-GIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVL 126 (433)
Q Consensus 77 ~~~~~~~~-~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~~~~ 126 (433)
+.+.+++. +++++. +.|.++..++.. |.+.++.++++|++|+|+|....
T Consensus 74 l~~~~~~~~gv~i~~-~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 74 AKYLLEGLRPLHLFQ-ATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHcCCCcEEEE-eEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 33445565 999985 589888765543 56677878999999999998654
No 111
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.02 E-value=3e-09 Score=102.15 Aligned_cols=60 Identities=12% Similarity=0.151 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc--EEECCEEEEcccCccC
Q 013952 204 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR--TLEADIVVVGVGGRPL 263 (433)
Q Consensus 204 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~--~i~~d~vi~a~G~~p~ 263 (433)
..+.+.+.+.+++.|++++++++|+++..++++....+.+.+|+ ++.+|.||.|+|..+.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~ 167 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRV 167 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchh
Confidence 45667777888888999999999999987545555677778887 6999999999997763
No 112
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.01 E-value=5.7e-11 Score=116.38 Aligned_cols=150 Identities=19% Similarity=0.156 Sum_probs=104.6
Q ss_pred ecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHH---------HHHHHhcCCCcEEEECCCHHHHHHHHHHHh
Q 013952 113 KYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKL---------VEAIKAKKNGKAVVVGGGYIGLELSAALKI 183 (433)
Q Consensus 113 ~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~---------~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~ 183 (433)
.||.+++++|++|+.++ +++.+.++++......+..++ ..........+|+|||+|+.|+.+|..|++
T Consensus 37 ~~~~l~~~~g~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIVGgG~aGl~aA~~La~ 113 (497)
T 2bry_A 37 SFQGLCRALGVESGGGL---SQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQQGQACTNTKCLVVGAGPCGLRAAVELAL 113 (497)
T ss_dssp HHHHHHHHHTCCTTCHH---HHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGGGGTTTTTCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCc---EeehhhHHHHHHHHHHHhhhhhhhhhccccccCccccCCCCEEEECccHHHHHHHHHHHH
Confidence 56889999999987665 333222333344444444333 111111235789999999999999999999
Q ss_pred CCCeEEEEccCCccCCC----CC----------------------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013952 184 NNIDVSMVYPEPWCMPR----LF----------------------------TADIAAFYEGYYANKGIKIIKGTVAVGFT 231 (433)
Q Consensus 184 ~g~~V~li~~~~~~~~~----~~----------------------------~~~~~~~l~~~l~~~GV~v~~~~~v~~i~ 231 (433)
.|.+|+++++.+.+... .. ..++.+.+.+.+++.||+++++++|.++.
T Consensus 114 ~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~ 193 (497)
T 2bry_A 114 LGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQ 193 (497)
T ss_dssp TTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEE
T ss_pred CCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEE
Confidence 99999999987643210 00 15667778888888999999999999998
Q ss_pred ecC-CCcEEEEEe--C-CC--cEEECCEEEEcccCccChh
Q 013952 232 TNA-DGEVKEVKL--K-DG--RTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 232 ~~~-~g~~~~v~~--~-~g--~~i~~d~vi~a~G~~p~~~ 265 (433)
.++ ++....|.+ . +| .++.+|.||+|+|.++...
T Consensus 194 ~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 194 PPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp CCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred EecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 631 233355666 4 55 4699999999999887654
No 113
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.01 E-value=2.9e-10 Score=111.88 Aligned_cols=57 Identities=14% Similarity=0.213 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 204 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 204 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
..+.+.+.+.+++.|++|+++++|++|.. +++++..|++.+|+++.||.||++++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHH
Confidence 57888899999999999999999999987 5788889999999999999999988753
No 114
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.97 E-value=5.6e-09 Score=101.01 Aligned_cols=59 Identities=27% Similarity=0.414 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
...+.+.+.+.+++.||+++++++|+++.. +++.+..|.+.+|+++.+|.||+|+|..+
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 367888899999999999999999999986 45666788898887899999999999776
No 115
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.92 E-value=1.2e-07 Score=90.39 Aligned_cols=58 Identities=24% Similarity=0.350 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
+..+.+.+.+.+++.|++++++++|+++.. +++.+..|.+.+| ++.+|.||+|+|...
T Consensus 173 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 173 HDHVAWAFARKANEMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 457888899999999999999999999987 3566677888888 799999999999764
No 116
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.92 E-value=2.4e-09 Score=101.37 Aligned_cols=117 Identities=19% Similarity=0.195 Sum_probs=75.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCc--c-------------ccccCCCCCCCCCCcccc
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPAL--S-------------KAYLFPEGTARLPGFHVC 68 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~~ 68 (433)
.+||+|||||++|+++|..|++.|++ |+|+|+. ......... . ..+.... .....+...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~---v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~ 85 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWD---VRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGS--HTPPTYETW 85 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTC--BCCSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---EEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhC--CCccceEEE
Confidence 58999999999999999999999987 9999998 221100000 0 0000000 000000000
Q ss_pred --------c---CC--------CCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccc
Q 013952 69 --------V---GS--------GGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 69 --------~---~~--------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
. +. .....+.+.+.+.|++++.++.|..++.++ .|++.+++++++|.||.|+|.....
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEECCCCEEEcCEEEECCCccHHH
Confidence 0 00 001123344556799999999999998755 8888888899999999999987643
No 117
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.91 E-value=1.4e-09 Score=103.80 Aligned_cols=123 Identities=16% Similarity=0.180 Sum_probs=72.1
Q ss_pred CCC-CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCc--cc---------ccc----CCCCC-C--
Q 013952 1 MAE-KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPAL--SK---------AYL----FPEGT-A-- 60 (433)
Q Consensus 1 Mm~-~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~--~~---------~~~----~~~~~-~-- 60 (433)
||+ .++||+|||||++|+++|..|++.|++ |+|+|+. ......+.. .. ++. ..... .
T Consensus 1 ~M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~---V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 77 (399)
T 2x3n_A 1 GMTDNHIDVLINGCGIGGAMLAYLLGRQGHR---VVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHE 77 (399)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECE
T ss_pred CCCCCcCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCccee
Confidence 554 358999999999999999999999987 9999998 221100000 00 000 00000 0
Q ss_pred ---CCCCc-ccccCC---------------CCCCCCHhHHHhC-CcEEEeCceEEEEECCCC----EEEeCCCcEEecce
Q 013952 61 ---RLPGF-HVCVGS---------------GGERLLPEWYKEK-GIELILSTEIVRADIASK----TLLSATGLIFKYQI 116 (433)
Q Consensus 61 ---~~~~~-~~~~~~---------------~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~----~v~~~~~~~~~~d~ 116 (433)
...+. ...+.. .....+.+.+.+. +++++.+++|.+++.++. .|++.+|+++++|.
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~ 157 (399)
T 2x3n_A 78 LEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRV 157 (399)
T ss_dssp EEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCE
Confidence 00000 000000 0001122223344 899999999999886544 56777888899999
Q ss_pred EEEccCCCcc
Q 013952 117 LVIATGSTVL 126 (433)
Q Consensus 117 lvlAtG~~~~ 126 (433)
||.|+|....
T Consensus 158 vV~AdG~~s~ 167 (399)
T 2x3n_A 158 VVGADGIASY 167 (399)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCCChH
Confidence 9999998654
No 118
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.89 E-value=2.5e-09 Score=101.89 Aligned_cols=121 Identities=16% Similarity=0.168 Sum_probs=73.7
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccc-cCC--------CC----C--CCCCCc
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAY-LFP--------EG----T--ARLPGF 65 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~-~~~--------~~----~--~~~~~~ 65 (433)
|++..+||+|||||++|+++|..|++.|++ |+|+|+...+.... ..+. +.+ .. . ......
T Consensus 1 M~~~~~~V~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~--~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~ 75 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISGLTAALMLRDAGVD---VDVYERSPQPLSGF--GTGIVVQPELVHYLLEQGVELDSISVPSSSM 75 (397)
T ss_dssp -CCCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSCCCC--SCEEECCHHHHHHHHHTTCCGGGTCBCCCEE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCCCCCcc--ccccccChhHHHHHHHcCCccccccccccce
Confidence 666679999999999999999999999987 99999982221110 0000 000 00 0 000000
Q ss_pred ccc---cCCC--------C---CCCCHhHHHh--CCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCcc
Q 013952 66 HVC---VGSG--------G---ERLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVL 126 (433)
Q Consensus 66 ~~~---~~~~--------~---~~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~ 126 (433)
... .+.. . ...+.+.+.+ .+++++.+++|.++..++. +|++.+++++++|.||.|+|....
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 76 EYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred EEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 000 0000 0 0011222222 3889999999999876554 466788889999999999998654
No 119
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.89 E-value=3.8e-08 Score=100.38 Aligned_cols=58 Identities=9% Similarity=0.074 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc-EEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR-TLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~-~i~~d~vi~a~G~~p 262 (433)
+..+...+.+.+++.|++++++++|+++..++++ +.|.+.+|. ++.+|.||+|+|...
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~--v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQ--WQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSS--EEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCe--EEEEeCCCcEEEECCEEEECCCcch
Confidence 5688889999999999999999999999874333 578888886 799999999999653
No 120
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.88 E-value=3.3e-09 Score=96.07 Aligned_cols=119 Identities=18% Similarity=0.150 Sum_probs=68.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEcCCCCCCCCCCccccccCC-----CCCCCC--CCccccc-C-----
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKEVAPYERPALSKAYLFP-----EGTARL--PGFHVCV-G----- 70 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~-~----- 70 (433)
++||+|||||++|+++|..|+++ |.+ |+|+|+...+........+.+.. .....+ .+.++.. +
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~---V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~ 115 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQ---VAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVV 115 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSC---EEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCe---EEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEe
Confidence 57999999999999999999997 887 99999982111111111000000 000000 0000000 0
Q ss_pred ---CCCCCCCHhHHHh-CCcEEEeCceEEEEECCCCEE---EeC---------CC-----cEEecceEEEccCCCcc
Q 013952 71 ---SGGERLLPEWYKE-KGIELILSTEIVRADIASKTL---LSA---------TG-----LIFKYQILVIATGSTVL 126 (433)
Q Consensus 71 ---~~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~v---~~~---------~~-----~~~~~d~lvlAtG~~~~ 126 (433)
......+.+.+.+ .|++++.++.|..+..++..+ .+. ++ .++++|.+|+|+|..+.
T Consensus 116 ~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 116 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGP 192 (284)
T ss_dssp SCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSST
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchH
Confidence 0000012223333 699999999999998665533 331 22 57999999999997654
No 121
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.88 E-value=4e-08 Score=93.40 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCcEEECCEEEEcccCcc
Q 013952 204 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 204 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~g~~i~~d~vi~a~G~~p 262 (433)
..+.+.+.+.+++.|++++.+++|+++.. .++.+.+|.+ .++.++.+|.||.|.|...
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEE-eCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 35667778888889999999999999987 3555555666 3456899999999999766
No 122
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.87 E-value=3.5e-08 Score=93.60 Aligned_cols=72 Identities=17% Similarity=0.274 Sum_probs=55.9
Q ss_pred CeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 186 IDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 186 ~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
....++.+....+. +..+...+.+.+++.|++++++++|+++..++++ ..+.+.+| ++.+|.||+|+|...+
T Consensus 135 ~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 135 NYNAIFEPNSGVLF---SENCIRAYRELAEARGAKVLTHTRVEDFDISPDS--VKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp TEEEEEETTCEEEE---HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSC--EEEEETTE-EEEEEEEEECCGGGHH
T ss_pred CceEEEeCCCcEEe---HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCe--EEEEeCCC-EEEeCEEEEecCccHH
Confidence 45666666555443 5688889999999999999999999999874333 45777666 7999999999997653
No 123
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.86 E-value=8.9e-09 Score=99.73 Aligned_cols=59 Identities=22% Similarity=0.369 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEec--------------CCCcEEEEEeCCCcEE--ECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTN--------------ADGEVKEVKLKDGRTL--EADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~--------------~~g~~~~v~~~~g~~i--~~d~vi~a~G~~p 262 (433)
+..+.+.+.+.+++.|++++++++|+++..+ +++.+..|.+.+| ++ .||.||+|+|...
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 4588889999999999999999999999752 2445567888888 68 9999999999753
No 124
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.86 E-value=4.3e-09 Score=101.06 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
...+.+.+.+.+++.|++++++++|++|.. +++++ | ..+|+++.+|.||+|+|......++
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~v--V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINI-EEKKV--Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEET-TTTEE--E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEE-ECCEE--E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 478889999999999999999999999987 34444 5 4677789999999999976544444
No 125
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.86 E-value=5.2e-09 Score=103.74 Aligned_cols=37 Identities=22% Similarity=0.486 Sum_probs=34.5
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|++.++||+|||||++|+++|..|+++|.+ |+|||+.
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~ 37 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVR---VLVVERR 37 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSS
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCC
Confidence 666679999999999999999999999987 9999998
No 126
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.86 E-value=1.6e-09 Score=105.15 Aligned_cols=125 Identities=19% Similarity=0.239 Sum_probs=74.5
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CC-CCCC-CC--ccccccCCCC---C------CCCCCcc
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VA-PYER-PA--LSKAYLFPEG---T------ARLPGFH 66 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~-~~~~-~~--~~~~~~~~~~---~------~~~~~~~ 66 (433)
||+.++||+|||||++|+++|..|++.|++ |+|+|+. .. .... +. ++...+..-. . ....+..
T Consensus 2 mm~~~~dVvIVGaG~aGl~aA~~La~~G~~---V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~ 78 (453)
T 3atr_A 2 MKELKYDVLIIGGGFAGSSAAYQLSRRGLK---ILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIK 78 (453)
T ss_dssp CEEEECSEEEECCSHHHHHHHHHHSSSSCC---EEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEE
T ss_pred CCCCcCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceE
Confidence 666679999999999999999999999987 9999998 21 1111 10 0000000000 0 0000000
Q ss_pred ---------cccCC--------CCCCCCHhHHHhCCcEEEeCceEEEEECCCCE---EEeC---CCc--EEecceEEEcc
Q 013952 67 ---------VCVGS--------GGERLLPEWYKEKGIELILSTEIVRADIASKT---LLSA---TGL--IFKYQILVIAT 121 (433)
Q Consensus 67 ---------~~~~~--------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~~~---~~~--~~~~d~lvlAt 121 (433)
..... .....+.+.+.+.|++++.++.|.++..++.. |.+. +|+ ++++|.||.|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 79 LYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEAT 158 (453)
T ss_dssp EECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECC
T ss_pred EECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECc
Confidence 00000 00011223334579999999999998766554 3343 565 79999999999
Q ss_pred CCCcccc
Q 013952 122 GSTVLRL 128 (433)
Q Consensus 122 G~~~~~~ 128 (433)
|......
T Consensus 159 G~~s~vr 165 (453)
T 3atr_A 159 GYSRSFR 165 (453)
T ss_dssp GGGCTTG
T ss_pred CCchhhH
Confidence 9765443
No 127
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.86 E-value=2.9e-09 Score=105.17 Aligned_cols=47 Identities=11% Similarity=0.035 Sum_probs=37.4
Q ss_pred HHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 213 YYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 213 ~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
..++.|++++++++|++|..+ ++. ..|.+.+|+++.||.||+|++..
T Consensus 221 l~~~lg~~i~~~~~V~~i~~~-~~~-v~v~~~~g~~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 221 IMDLLGDRVKLERPVIYIDQT-REN-VLVETLNHEMYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHGGGEESSCCEEEEECS-SSS-EEEEETTSCEEEESEEEECSCGG
T ss_pred HHHHcCCcEEcCCeeEEEEEC-CCe-EEEEECCCeEEEeCEEEECCCHH
Confidence 334448899999999999873 333 45888899899999999999853
No 128
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.84 E-value=2.4e-09 Score=106.02 Aligned_cols=157 Identities=15% Similarity=0.182 Sum_probs=92.4
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-C-CCCCCCCcccccc------------CCC------------
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-V-APYERPALSKAYL------------FPE------------ 57 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~-~~~~~~~~~~~~~------------~~~------------ 57 (433)
..|||+|||||+||++||..|++.|.+ |+|+|+. . .....|..+.+.. ...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLH---CLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCc---EEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 368999999999999999999999987 9999987 2 2111121111100 000
Q ss_pred ---CCCCCCCccc---ccCC-CCCCCCHhHHHh-CCcEEEeCceEEEEECCCCE---EEeCCCcEEecceEEEccCCCcc
Q 013952 58 ---GTARLPGFHV---CVGS-GGERLLPEWYKE-KGIELILSTEIVRADIASKT---LLSATGLIFKYQILVIATGSTVL 126 (433)
Q Consensus 58 ---~~~~~~~~~~---~~~~-~~~~~~~~~~~~-~~v~~~~~~~v~~i~~~~~~---v~~~~~~~~~~d~lvlAtG~~~~ 126 (433)
....-+.... .... .....+.+.+++ .+++++.+ .|..+..++.. |.+.+|.++.++.+|+|||+.+.
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 0000000000 0000 000112233444 48999765 88887765554 56778889999999999999775
Q ss_pred ccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEE
Q 013952 127 RLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMV 191 (433)
Q Consensus 127 ~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li 191 (433)
.+. +.|.. -+. +.+++ |+.++++++..|.+.|.+|..+
T Consensus 176 ~~i---~~G~~---~~~------------------~g~~v---G~~~a~~la~~L~~~G~kv~~l 213 (641)
T 3cp8_A 176 GLI---HIGMD---HFP------------------GGRST---AEPPVEGLTESLASLGFSFGRL 213 (641)
T ss_dssp CEE---EETTE---EEE------------------CSSST---TSCCBCSHHHHHHHTTCCEEEE
T ss_pred ccc---eeeee---eec------------------ccccc---CCchhhhhHHHHHhCCceEEee
Confidence 443 12211 011 11221 3567788999999999988655
No 129
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.84 E-value=1.7e-08 Score=95.51 Aligned_cols=58 Identities=19% Similarity=0.123 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
+..+.+.+.+.+++.|++++++++|.++..+ ++.+ .|.+.+| ++.+|.||+|+|....
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGTH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhHH
Confidence 5678889999999999999999999999873 3444 7777777 8999999999997643
No 130
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.83 E-value=5.6e-08 Score=99.00 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=49.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
+..+...+.+.+++.|++++++++|+++..+ ++. +.|.+.+|.++.+|.||+|+|...
T Consensus 416 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 416 PAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDC-WLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCe-EEEEECCCCEEECCEEEECCCcch
Confidence 4688889999999999999999999999873 333 578888888899999999999653
No 131
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.82 E-value=9.7e-09 Score=100.85 Aligned_cols=119 Identities=19% Similarity=0.232 Sum_probs=74.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCC---------------CCC-C--Cc--cccccCCCCC--CC-
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAP---------------YER-P--AL--SKAYLFPEGT--AR- 61 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~---------------~~~-~--~~--~~~~~~~~~~--~~- 61 (433)
.+||+|||||++|+++|+.|++.|++ |+|+|+.... +.. + .. .+...+.... ..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~k---V~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i 183 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFN---PIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQV 183 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCC---CEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCe---EEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEe
Confidence 37999999999999999999999988 9999987111 000 0 00 0000000000 00
Q ss_pred -CCCcc--------cccCCC------------------CCCCCHhHHHhCCcEEEeCceEEEEECCCC---EEEeCCCcE
Q 013952 62 -LPGFH--------VCVGSG------------------GERLLPEWYKEKGIELILSTEIVRADIASK---TLLSATGLI 111 (433)
Q Consensus 62 -~~~~~--------~~~~~~------------------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~~~~ 111 (433)
.+.+. ...+.. ....+.+.+++.|++++.++.|..+..++. .|.+.++++
T Consensus 184 ~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~ 263 (549)
T 3nlc_A 184 KDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE 263 (549)
T ss_dssp CCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCE
T ss_pred ccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCE
Confidence 00000 000000 011233445568999999999999987654 367788889
Q ss_pred EecceEEEccCCCcc
Q 013952 112 FKYQILVIATGSTVL 126 (433)
Q Consensus 112 ~~~d~lvlAtG~~~~ 126 (433)
+.+|.||+|+|..+.
T Consensus 264 i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 264 IKSRHVVLAVGHSAR 278 (549)
T ss_dssp EECSCEEECCCTTCH
T ss_pred EECCEEEECCCCChh
Confidence 999999999998773
No 132
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.81 E-value=3.2e-08 Score=98.28 Aligned_cols=61 Identities=25% Similarity=0.451 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHhc-CcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 203 TADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~-GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
...+.+.+.+.+++. ||+++++ +|+++..++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 193 ~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 193 AHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 356888888889888 9999999 999998755677778999999889999999999976543
No 133
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.78 E-value=1.4e-08 Score=99.97 Aligned_cols=122 Identities=17% Similarity=0.276 Sum_probs=72.4
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCC--Ccccc---ccCCCCC------CCCC--------
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERP--ALSKA---YLFPEGT------ARLP-------- 63 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~--~~~~~---~~~~~~~------~~~~-------- 63 (433)
.++||+|||||++|+++|..|++.|++ |+|+|+. ....... ..... ++..... ...+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~ 82 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHR---VLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFR 82 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCC---EEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEE
Confidence 358999999999999999999999987 9999998 2211110 00000 0000000 0000
Q ss_pred ------CcccccC-----C-C---------CCCCCHhHHHhCCcEEEeCceEEEEECCCCE---EE--eCCCc--EEecc
Q 013952 64 ------GFHVCVG-----S-G---------GERLLPEWYKEKGIELILSTEIVRADIASKT---LL--SATGL--IFKYQ 115 (433)
Q Consensus 64 ------~~~~~~~-----~-~---------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~---v~--~~~~~--~~~~d 115 (433)
.....+. . . ....+.+.+.+.|++++.++.|..+..++.. |. ..+|. ++.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad 162 (512)
T 3e1t_A 83 WGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHAR 162 (512)
T ss_dssp CSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEE
T ss_pred ecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcC
Confidence 0000000 0 0 0011233345579999999999998876653 33 34563 79999
Q ss_pred eEEEccCCCcccc
Q 013952 116 ILVIATGSTVLRL 128 (433)
Q Consensus 116 ~lvlAtG~~~~~~ 128 (433)
.||.|+|......
T Consensus 163 ~VI~AdG~~S~vr 175 (512)
T 3e1t_A 163 FIVDASGNRTRVS 175 (512)
T ss_dssp EEEECCCTTCSSG
T ss_pred EEEECCCcchHHH
Confidence 9999999865443
No 134
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.78 E-value=4.1e-10 Score=113.02 Aligned_cols=54 Identities=17% Similarity=0.310 Sum_probs=43.0
Q ss_pred HhcCcEEEcCCeEEEEEecCC-CcEEEEEeC---CCc--EEECCEEEEcccCccChhhhh
Q 013952 215 ANKGIKIIKGTVAVGFTTNAD-GEVKEVKLK---DGR--TLEADIVVVGVGGRPLISLFK 268 (433)
Q Consensus 215 ~~~GV~v~~~~~v~~i~~~~~-g~~~~v~~~---~g~--~i~~d~vi~a~G~~p~~~~~~ 268 (433)
++.||++++++.|++|..+++ +++.+|++. +|+ ++.+|.||+|+|..|+..++.
T Consensus 271 ~~~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 271 PEERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred cCCCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 445899999999999987432 377777774 353 688999999999999998774
No 135
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.77 E-value=9.4e-08 Score=90.92 Aligned_cols=57 Identities=18% Similarity=0.165 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
+..+...+.+.+++.|++++++++|+++..+ ++. ..|.+.++ ++.+|.||+|+|...
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-v~v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPD-ADG-VSVTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTE-EEEEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCe-EEEEECCC-EEEcCEEEEcCCcCh
Confidence 4567788888889999999999999999873 333 45777666 799999999999753
No 136
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.77 E-value=2.1e-08 Score=94.78 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=48.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
+..+...+.+.+++.|++++++++|+++..+ ++. ..|++.+| ++.||.||+|+|...
T Consensus 153 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 153 TDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCe-EEEEeCCC-EEEcCEEEECCChhH
Confidence 5678888999999999999999999999873 333 67888887 899999999999754
No 137
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.76 E-value=8.2e-09 Score=101.04 Aligned_cols=118 Identities=17% Similarity=0.188 Sum_probs=72.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccc------cCCCCC-CCCCCccc-----ccCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAY------LFPEGT-ARLPGFHV-----CVGS 71 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~------~~~~~~-~~~~~~~~-----~~~~ 71 (433)
.+||+|||||++|+++|..|++.|++ |+|||+. ... ++...... +..... .....+.. ....
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~---V~liEk~~~~g--~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 166 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGAR---VVLVEKRIKFS--RHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIR 166 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCSSCC--CCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHH
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCe---EEEEEeccccC--CCCcccCChhHHHHHHHcCCccccccccccccccCCHH
Confidence 58999999999999999999999987 9999998 221 11100000 000000 00000000 0000
Q ss_pred CCCCCCHhHHHhCCcEEEeCceEEEEECC-----CCEEEe--C-CC--cEEecceEEEccCCCccc
Q 013952 72 GGERLLPEWYKEKGIELILSTEIVRADIA-----SKTLLS--A-TG--LIFKYQILVIATGSTVLR 127 (433)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~-----~~~v~~--~-~~--~~~~~d~lvlAtG~~~~~ 127 (433)
.....+.+.+++.+++++.++.|.++..+ ...|.+ . +| .++.+|+||+|+|..+..
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 00112344455689999999999999863 124555 3 45 478999999999987654
No 138
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.76 E-value=6.2e-08 Score=90.51 Aligned_cols=95 Identities=20% Similarity=0.260 Sum_probs=78.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC---------------------CCC-C---------CHHHHHHHH
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM---------------------PRL-F---------TADIAAFYE 211 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~---------------------~~~-~---------~~~~~~~l~ 211 (433)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.+. +.. . ..++.+.+.
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYLA 83 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHHH
Confidence 379999999999999999999999999999875421 000 0 067888899
Q ss_pred HHHHhcCcEEEcCCeEEEEEecCCCcEEE-EEeCCCcEEECCEEEEcccC
Q 013952 212 GYYANKGIKIIKGTVAVGFTTNADGEVKE-VKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 212 ~~l~~~GV~v~~~~~v~~i~~~~~g~~~~-v~~~~g~~i~~d~vi~a~G~ 260 (433)
+.+++.|++++++++|.++.. ++.... |.+.++ ++.+|.||+|+|.
T Consensus 84 ~~~~~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g-~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 84 QYEQKYALPVLRPIRVQRVSH--FGERLRVVARDGR-QWLARAVISATGT 130 (357)
T ss_dssp HHHHHTTCCEECSCCEEEEEE--ETTEEEEEETTSC-EEEEEEEEECCCS
T ss_pred HHHHHcCCEEEcCCEEEEEEE--CCCcEEEEEeCCC-EEEeCEEEECCCC
Confidence 999999999999999999987 333355 888887 8999999999995
No 139
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.76 E-value=9.8e-08 Score=93.72 Aligned_cols=102 Identities=20% Similarity=0.210 Sum_probs=84.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc------------------------------------C----CC-
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC------------------------------------M----PR- 200 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~------------------------------------~----~~- 200 (433)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ + ..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 468999999999999999999999999999987432 0 00
Q ss_pred CC------------------------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE
Q 013952 201 LF------------------------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE 250 (433)
Q Consensus 201 ~~------------------------------~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ 250 (433)
.. ...+.+.+.+.+++.|++++++++|+++.. +++.+..|.+.+|+++.
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIK 265 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEE
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEE
Confidence 00 145667788888889999999999999987 45677789999999999
Q ss_pred CCEEEEcccCccCh
Q 013952 251 ADIVVVGVGGRPLI 264 (433)
Q Consensus 251 ~d~vi~a~G~~p~~ 264 (433)
||.||+|+|..+..
T Consensus 266 Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 266 SRHVVLAVGHSARD 279 (549)
T ss_dssp CSCEEECCCTTCHH
T ss_pred CCEEEECCCCChhh
Confidence 99999999998864
No 140
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.76 E-value=1.4e-08 Score=101.07 Aligned_cols=117 Identities=20% Similarity=0.314 Sum_probs=72.0
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCC-Ccc--------------------------ccccC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERP-ALS--------------------------KAYLF 55 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~-~~~--------------------------~~~~~ 55 (433)
+.+||+|||||++|+++|..|++.|++ |+|+|+. ....... .+. ..+..
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~---V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 98 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHD---VTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLW 98 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCC---EEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEe
Confidence 468999999999999999999999987 9999998 2211110 000 00000
Q ss_pred CCCCCCCCCcccccCC--------C---------CCCCCHhHHHhCCcEEEeCceEEEEECC-CC--EEEeC-CC--cEE
Q 013952 56 PEGTARLPGFHVCVGS--------G---------GERLLPEWYKEKGIELILSTEIVRADIA-SK--TLLSA-TG--LIF 112 (433)
Q Consensus 56 ~~~~~~~~~~~~~~~~--------~---------~~~~~~~~~~~~~v~~~~~~~v~~i~~~-~~--~v~~~-~~--~~~ 112 (433)
.... ......+.. . ....+.+.+.+.|++++.++.|..+..+ +. .|.+. +| .++
T Consensus 99 ~~~~---~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i 175 (591)
T 3i3l_A 99 GQDQ---APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTV 175 (591)
T ss_dssp SSSC---CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEE
T ss_pred cCCC---ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEE
Confidence 0000 000000000 0 0011233445689999999999999865 32 45555 55 579
Q ss_pred ecceEEEccCCCcc
Q 013952 113 KYQILVIATGSTVL 126 (433)
Q Consensus 113 ~~d~lvlAtG~~~~ 126 (433)
.+|.+|.|+|....
T Consensus 176 ~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 176 ESDFVIDAGGSGGP 189 (591)
T ss_dssp EESEEEECCGGGCH
T ss_pred EcCEEEECCCCcch
Confidence 99999999997653
No 141
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.75 E-value=2.1e-08 Score=96.36 Aligned_cols=63 Identities=21% Similarity=0.255 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
...+.+.+.+.+++.|++++++++|++|.. +++++..|.++ |+++.+|.||+|+|......++
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~-~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILI-ENGKAAGIIAD-DRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEET-TEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEE-ECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhc
Confidence 367888999999999999999999999987 45666667775 7789999999999965443333
No 142
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.75 E-value=1.9e-08 Score=99.98 Aligned_cols=119 Identities=22% Similarity=0.247 Sum_probs=70.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC-CCCCC-ccc---------cc----cCCCCC--CC-CCC-
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP-YERPA-LSK---------AY----LFPEGT--AR-LPG- 64 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~-~~~~~-~~~---------~~----~~~~~~--~~-~~~- 64 (433)
++||+|||||++|+++|..|++.|++ |+|||+. ... ..+.. +.. ++ ...... .. +.+
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~ 125 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI 125 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc
Confidence 47999999999999999999999998 9999998 211 11100 000 00 000000 00 000
Q ss_pred ----cccc-c--CCC---------CCCCCHhHHHhCCcEEEeCceEEEEECCCC--EEEe--CCC-cEEecceEEEccCC
Q 013952 65 ----FHVC-V--GSG---------GERLLPEWYKEKGIELILSTEIVRADIASK--TLLS--ATG-LIFKYQILVIATGS 123 (433)
Q Consensus 65 ----~~~~-~--~~~---------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~--~~~-~~~~~d~lvlAtG~ 123 (433)
+... . ... ....+.+.+.+.|++++.+++|..+..++. +|++ .+| +++++|+||.|.|.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~ 205 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGG 205 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCS
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCC
Confidence 0000 0 000 001123334456999999999999877654 3444 567 68999999999998
Q ss_pred Ccc
Q 013952 124 TVL 126 (433)
Q Consensus 124 ~~~ 126 (433)
...
T Consensus 206 ~S~ 208 (570)
T 3fmw_A 206 RST 208 (570)
T ss_dssp SCH
T ss_pred Cch
Confidence 653
No 143
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.74 E-value=6.6e-08 Score=92.05 Aligned_cols=120 Identities=14% Similarity=0.139 Sum_probs=70.7
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccc-cCCCC-------------------CC---
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAY-LFPEG-------------------TA--- 60 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~-~~~~~-------------------~~--- 60 (433)
..+||+|||||++|+++|..|++.|++ |+|+|+...+..+.. ...+ +.+.. ..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~-g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 100 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGID---VSVYERDNDREARIF-GGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVN 100 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCE---EEEEECSSSTTCCCC-SCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCcccccc-CCeeeeCCccHHHHHHhcChHHHHHHhhcccceE
Confidence 468999999999999999999999987 999999821111110 0000 00000 00
Q ss_pred --CCCCccc-cc--------CCCC--CCCCHhHHHh--CCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCC
Q 013952 61 --RLPGFHV-CV--------GSGG--ERLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGS 123 (433)
Q Consensus 61 --~~~~~~~-~~--------~~~~--~~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~ 123 (433)
...+... .. .... ...+.+.+.+ .+++++.+++|..+..++. +|++.+++++++|.||.|+|.
T Consensus 101 ~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 101 IADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp EECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred EECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 0000000 00 0000 0011122222 1357888999999886554 567778888999999999998
Q ss_pred Cccc
Q 013952 124 TVLR 127 (433)
Q Consensus 124 ~~~~ 127 (433)
....
T Consensus 181 ~S~v 184 (398)
T 2xdo_A 181 MSKV 184 (398)
T ss_dssp TCSC
T ss_pred chhH
Confidence 6543
No 144
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.74 E-value=1.9e-08 Score=93.72 Aligned_cols=42 Identities=17% Similarity=0.360 Sum_probs=34.0
Q ss_pred HhCCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCC
Q 013952 82 KEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGS 123 (433)
Q Consensus 82 ~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~ 123 (433)
++.+++++.++.|..|..++. +|.+.++.++.+|+||+|+..
T Consensus 120 ~~~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 120 KESGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HHHTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HhcCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 345899999999999987654 466677777899999999874
No 145
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.74 E-value=8.7e-08 Score=99.91 Aligned_cols=58 Identities=26% Similarity=0.311 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
+..+...+.+.+++.|++++++++|+++.. +++.+..|.+.+| ++.||.||+|+|...
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 568888999999999999999999999987 3556667888877 799999999999764
No 146
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.72 E-value=9.2e-08 Score=93.07 Aligned_cols=52 Identities=25% Similarity=0.298 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 205 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 205 ~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
.+.+.+.+.+.+ ++++++++|++|+.++++ ..|.+.+|+++.+|.||+|++.
T Consensus 236 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vi~a~p~ 287 (470)
T 3i6d_A 236 TLVEEIEKQLKL--TKVYKGTKVTKLSHSGSC--YSLELDNGVTLDADSVIVTAPH 287 (470)
T ss_dssp HHHHHHHHTCCS--EEEECSCCEEEEEECSSS--EEEEESSSCEEEESEEEECSCH
T ss_pred HHHHHHHHhcCC--CEEEeCCceEEEEEcCCe--EEEEECCCCEEECCEEEECCCH
Confidence 444444443332 799999999999884443 5788899988999999999984
No 147
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.71 E-value=7.1e-08 Score=89.47 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+||+|||||++|+++|..|++.|++ |+|+|+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~---V~vlE~~ 34 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCc---EEEEECC
Confidence 7999999999999999999999987 9999998
No 148
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.68 E-value=2.5e-08 Score=99.37 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=31.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+||||||||++|++||..|+++|.+ |+|||+.
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~ 153 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGAN---VILVDKA 153 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCC---EEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCC
Confidence 57999999999999999999999987 9999998
No 149
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.67 E-value=4.9e-08 Score=97.39 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=31.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+||||||||++|++||..|++.|.+ |+|+|+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~ 158 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAK---VILIEKE 158 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCC
Confidence 58999999999999999999999987 9999998
No 150
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.66 E-value=1.3e-07 Score=93.86 Aligned_cols=59 Identities=22% Similarity=0.152 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---g--~~i~~d~vi~a~G~~p 262 (433)
+..+...+.+.+++.|++++++++|+++.. +++++..|.+.+ | .++.||.||.|+|...
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 567888888889999999999999999987 466666777653 3 4799999999999653
No 151
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.66 E-value=1.7e-07 Score=92.08 Aligned_cols=58 Identities=16% Similarity=0.114 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC-c--EEECC-EEEEcccCcc
Q 013952 205 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG-R--TLEAD-IVVVGVGGRP 262 (433)
Q Consensus 205 ~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g-~--~i~~d-~vi~a~G~~p 262 (433)
.+.+.+.+.+++.||+++++++++++..++++++..|...++ + ++.|| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788899999999999999999999998854688888776543 2 58996 9999999543
No 152
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.64 E-value=8.4e-07 Score=88.33 Aligned_cols=61 Identities=26% Similarity=0.313 Sum_probs=48.5
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC--CCc--EEECCEEEEcccCccC
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK--DGR--TLEADIVVVGVGGRPL 263 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~--~g~--~i~~d~vi~a~G~~p~ 263 (433)
...+.+.+.+.+++.||++++++++.++..++++++.+|... +|+ .+.+|.||+|+|..++
T Consensus 254 g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 254 GAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 457788889999999999999999999986332777777665 564 6899999999996553
No 153
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.64 E-value=9.7e-08 Score=88.52 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=79.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC----cc------------CCC----CCCHHHHHHHHHHHHhcCcEE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP----WC------------MPR----LFTADIAAFYEGYYANKGIKI 221 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~----~~------------~~~----~~~~~~~~~l~~~l~~~GV~v 221 (433)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+ .. .+. ....++.+.+.+.+++.|+++
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~i 101 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFGTEI 101 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcCCEE
Confidence 5689999999999999999999999999999843 10 111 113578888999999999999
Q ss_pred EcCCeEEEEEecCCCcEEEEEe---CCCcEEECCEEEEcccCccChh
Q 013952 222 IKGTVAVGFTTNADGEVKEVKL---KDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 222 ~~~~~v~~i~~~~~g~~~~v~~---~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
+.++ +.++.. ++....+.+ .++..+.+|.+|+|+|.+|...
T Consensus 102 ~~~~-v~~i~~--~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 102 ITET-VSKVDL--SSKPFKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp ECSC-EEEEEC--SSSSEEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred EEeE-EEEEEE--cCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 9998 999987 333345665 3667899999999999877543
No 154
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.63 E-value=1.7e-07 Score=86.26 Aligned_cols=100 Identities=14% Similarity=0.133 Sum_probs=80.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccC--CccC--------CCC---CCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPE--PWCM--------PRL---FTADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~--~~~~--------~~~---~~~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
.+++|||+|+.|+.+|..|++.|.+|+++++. ..+. +.. ...++.+.+.+.+++.|++++. ++|.+
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~ 94 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEK 94 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEE
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEE
Confidence 48999999999999999999999999999985 1110 111 1357888888899999999999 89999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
+.. ++....+.+.++.++.+|.+|+|+|..|...
T Consensus 95 i~~--~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 95 IEN--RGDEFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp EEE--C--CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred EEe--cCCEEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 987 3333568888888999999999999887653
No 155
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.62 E-value=5.4e-08 Score=95.29 Aligned_cols=120 Identities=17% Similarity=0.234 Sum_probs=71.9
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC---cc---------ccccCCCC---CC---CCCCc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPA---LS---------KAYLFPEG---TA---RLPGF 65 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~---~~---------~~~~~~~~---~~---~~~~~ 65 (433)
+++||+||||||+|+++|..|+++|.+ |+|+|+...+..... +. -++..... .. .+.+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 86 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGL 86 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccce
Confidence 468999999999999999999999998 999999821111110 00 00000000 00 00000
Q ss_pred ccccC--C------------CCCCCCHhHHHhCCcEEEeCceEEEEECCCCE--EEeCCCc---EEecceEEEccCCCcc
Q 013952 66 HVCVG--S------------GGERLLPEWYKEKGIELILSTEIVRADIASKT--LLSATGL---IFKYQILVIATGSTVL 126 (433)
Q Consensus 66 ~~~~~--~------------~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~~~~~---~~~~d~lvlAtG~~~~ 126 (433)
..... . .....+.+.+.+.++++..++++.++..++.. +++.++. ++++|+||.|.|....
T Consensus 87 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 87 PIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp EEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred ecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 00000 0 00111223345679999999999998765553 4455554 7999999999998653
No 156
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.61 E-value=1.9e-07 Score=88.98 Aligned_cols=99 Identities=18% Similarity=0.207 Sum_probs=79.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC---------------------------CC-------------
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP---------------------------RL------------- 201 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~---------------------------~~------------- 201 (433)
...|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 45899999999999999999999999999988654210 00
Q ss_pred -----------------------CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcc
Q 013952 202 -----------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGV 258 (433)
Q Consensus 202 -----------------------~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~ 258 (433)
...++.+.+.+.+++.||+++++++|+++..+++ ...|.+.+| ++.||.||+|+
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~--~~~V~~~~g-~i~ad~VIlAt 183 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS--GFRVTTSAG-TVDAASLVVAS 183 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT--EEEEEETTE-EEEESEEEECC
T ss_pred HHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EEEEEECCc-EEEeeEEEECC
Confidence 0125667788888889999999999999987333 367888887 89999999999
Q ss_pred cCccC
Q 013952 259 GGRPL 263 (433)
Q Consensus 259 G~~p~ 263 (433)
|..+.
T Consensus 184 G~~S~ 188 (417)
T 3v76_A 184 GGKSI 188 (417)
T ss_dssp CCSSC
T ss_pred CCccC
Confidence 97763
No 157
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.61 E-value=1.2e-07 Score=87.69 Aligned_cols=101 Identities=15% Similarity=0.154 Sum_probs=81.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC---------------CCC---CCHHHHHHHHHHHHhcCcEEEcC
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM---------------PRL---FTADIAAFYEGYYANKGIKIIKG 224 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~---------------~~~---~~~~~~~~l~~~l~~~GV~v~~~ 224 (433)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. +.+ ...++.+.+.+.+++.|++++++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICLE 87 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEcc
Confidence 589999999999999999999999999999876321 110 13678888888889999999999
Q ss_pred CeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC---ccChh
Q 013952 225 TVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG---RPLIS 265 (433)
Q Consensus 225 ~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~---~p~~~ 265 (433)
++|.++....+ ....+.+.+|+ +.+|.+|+|+|. .|...
T Consensus 88 ~~v~~i~~~~~-~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~~~ 129 (332)
T 3lzw_A 88 QAVESVEKQAD-GVFKLVTNEET-HYSKTVIITAGNGAFKPRKL 129 (332)
T ss_dssp CCEEEEEECTT-SCEEEEESSEE-EEEEEEEECCTTSCCEECCC
T ss_pred CEEEEEEECCC-CcEEEEECCCE-EEeCEEEECCCCCcCCCCCC
Confidence 99999987333 24578888875 999999999998 66543
No 158
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.60 E-value=2.1e-07 Score=91.96 Aligned_cols=60 Identities=13% Similarity=0.318 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 204 ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 204 ~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
..+.+.+.+.+++ .||+++.+ +|+++..++++.+..|.+.+|.++.+|.||.|+|.+...
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 5677788888888 89999999 699998755666678888887789999999999986543
No 159
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.60 E-value=2.6e-08 Score=97.21 Aligned_cols=56 Identities=21% Similarity=0.399 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 204 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 204 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
..+.+.+.+.+++.|++++++++|++|..+++ ....|.+. +.++.+|.||+|++..
T Consensus 234 ~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~-~~~~v~~~-~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 234 EMLPQALETHLTSRGVSVLRGQPVCGLSLQAE-GRWKVSLR-DSSLEADHVISAIPAS 289 (477)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEECGG-GCEEEECS-SCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC-ceEEEEEC-CeEEEcCEEEECCCHH
Confidence 46788888999999999999999999987333 33467664 4579999999999853
No 160
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.59 E-value=2.7e-07 Score=85.53 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=78.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-------C-----------CCCCHHHHHHHHHHHHhcCcEEEcC
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------P-----------RLFTADIAAFYEGYYANKGIKIIKG 224 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~-------~-----------~~~~~~~~~~l~~~l~~~GV~v~~~ 224 (433)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .....++.+.+.+.+++.+++++++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 85 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLG 85 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEeC
Confidence 579999999999999999999999999999865431 0 0012567778888888889999999
Q ss_pred CeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 225 TVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 225 ~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
++|.+++..++ ...+.+.+|+++.+|.+|+|+|..
T Consensus 86 ~~v~~i~~~~~--~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 86 ERAETLEREGD--LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp CCEEEEEEETT--EEEEEETTSCEEEEEEEEECCTTS
T ss_pred CEEEEEEECCC--EEEEEECCCCEEEeCEEEECCCCC
Confidence 99999987322 456788888889999999999984
No 161
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.59 E-value=4e-09 Score=101.36 Aligned_cols=59 Identities=20% Similarity=0.197 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
..++.+.+.+.+++.|++++++++|++|..++++++.+|++.+|+++.||.||++++..
T Consensus 255 ~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 255 LGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp TTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 35789999999999999999999999998755788889999999899999999999987
No 162
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.59 E-value=4.2e-08 Score=97.18 Aligned_cols=37 Identities=27% Similarity=0.414 Sum_probs=33.2
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHH---cCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAK---QGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~---~g~~~~~V~lie~~ 40 (433)
|+++.+||+|||||++|+++|..|++ .|.+ |+|||+.
T Consensus 1 M~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~---V~liE~~ 40 (538)
T 2aqj_A 1 MNKPIKNIVIVGGGTAGWMAASYLVRALQQQAN---ITLIESA 40 (538)
T ss_dssp -CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCE---EEEEECS
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHhhcCCCCE---EEEECCC
Confidence 65667999999999999999999999 8887 9999997
No 163
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.59 E-value=4.4e-08 Score=93.14 Aligned_cols=120 Identities=18% Similarity=0.162 Sum_probs=71.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCC----CCCCCC-cccc---ccCCCC--------CCCCCCccc-
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVA----PYERPA-LSKA---YLFPEG--------TARLPGFHV- 67 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~----~~~~~~-~~~~---~~~~~~--------~~~~~~~~~- 67 (433)
++||+|||||++|+++|..|++.|++ |+|+|+... ...+.. +... .+.... ......+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGID---NVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEE
Confidence 47999999999999999999999987 999998821 101100 0000 000000 000000000
Q ss_pred --------c----c-CCC--------CCCCCHhHHHhCCcEEEeCceEEEEECCC---CEEEe-CCCc--EEecceEEEc
Q 013952 68 --------C----V-GSG--------GERLLPEWYKEKGIELILSTEIVRADIAS---KTLLS-ATGL--IFKYQILVIA 120 (433)
Q Consensus 68 --------~----~-~~~--------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~---~~v~~-~~~~--~~~~d~lvlA 120 (433)
. . +.. ....+.+.+.+.+++++.+++|.++..++ ..|++ .+|+ ++++|.||.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 0 0 000 01112233445799999999999998642 35666 6776 7999999999
Q ss_pred cCCCccc
Q 013952 121 TGSTVLR 127 (433)
Q Consensus 121 tG~~~~~ 127 (433)
+|.....
T Consensus 159 dG~~S~v 165 (394)
T 1k0i_A 159 DGFHGIS 165 (394)
T ss_dssp CCTTCST
T ss_pred CCCCcHH
Confidence 9976543
No 164
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.58 E-value=3.8e-07 Score=83.50 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=77.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCc-----------cCCC----CCCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013952 164 KAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW-----------CMPR----LFTADIAAFYEGYYANKGIKIIKGTVA 227 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~-~V~li~~~~~-----------~~~~----~~~~~~~~~l~~~l~~~GV~v~~~~~v 227 (433)
+++|||+|+.|+.+|..|++.|. +|+++++... ..+. ....++.+.+.+.+++.|++++. .++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v 81 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM-TAV 81 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC-SCE
T ss_pred eEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE-EEE
Confidence 68999999999999999999999 9999987421 0111 11256778888888999999998 789
Q ss_pred EEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 228 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 228 ~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
.++.. ++....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 82 ~~i~~--~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 82 QRVSK--KDSHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp EEEEE--ETTEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEE--cCCEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 99886 233356777888899999999999987654
No 165
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.58 E-value=4.5e-07 Score=84.96 Aligned_cols=99 Identities=17% Similarity=0.253 Sum_probs=80.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc-------CC--------C---CCCHHHHHHHHHHHHhcCcEEEc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-------MP--------R---LFTADIAAFYEGYYANKGIKIIK 223 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~-------~~--------~---~~~~~~~~~l~~~l~~~GV~v~~ 223 (433)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+ .+ . ....++.+.+.+.+++.|+++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 358999999999999999999999999999986532 11 0 01267788888888999999999
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 224 GTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 224 ~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
+++|.++...+++ ...|.+.+|+++.+|.+|+|+|..
T Consensus 94 ~~~v~~i~~~~~~-~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 94 NETVTKYTKLDDG-TFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp SCCEEEEEECTTS-CEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEEEEEECCCc-eEEEEECCCcEEEeeEEEEccCCC
Confidence 9999999873332 356888888899999999999983
No 166
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.57 E-value=3.5e-07 Score=90.43 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=83.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC--------CC------------C----------------CCHH
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------PR------------L----------------FTAD 205 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~--------~~------------~----------------~~~~ 205 (433)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. . ..++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 3589999999999999999999999999999854321 00 0 1246
Q ss_pred HHHHHHHHHHhcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEccc--CccCh
Q 013952 206 IAAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--GRPLI 264 (433)
Q Consensus 206 ~~~~l~~~l~~~GV--~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G--~~p~~ 264 (433)
+.+.+.+.+++.|+ +++++++|+++..++++....|.+.+|+++.+|.||+|+| .+|..
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~~ 163 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANT 163 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECCC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCCC
Confidence 77888888899998 8999999999987555556789999999999999999999 55554
No 167
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.57 E-value=1.4e-07 Score=92.26 Aligned_cols=120 Identities=18% Similarity=0.227 Sum_probs=72.2
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCC-c--c---------ccccCCCC---C---CCCCCc
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPA-L--S---------KAYLFPEG---T---ARLPGF 65 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~-~--~---------~~~~~~~~---~---~~~~~~ 65 (433)
.++||+||||||+|+++|..|+++|.+ |+|+|+...+..... . . -++..... . ..+.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 87 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGR 87 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecce
Confidence 358999999999999999999999998 999999821111110 0 0 00000000 0 000000
Q ss_pred ccccC----CC----------CCCCCHhHHHhCCcEEEeCceEEEEECCCC--EEEeCCCc---EEecceEEEccCCCcc
Q 013952 66 HVCVG----SG----------GERLLPEWYKEKGIELILSTEIVRADIASK--TLLSATGL---IFKYQILVIATGSTVL 126 (433)
Q Consensus 66 ~~~~~----~~----------~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~---~~~~d~lvlAtG~~~~ 126 (433)
..... .. ....+.+.+.+.++++..++++.++..++. ++++.++. ++++|+||.|.|....
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 88 PVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred ecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 00000 00 011123334567999999999999876554 45555554 7999999999998653
No 168
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.56 E-value=4.1e-07 Score=89.77 Aligned_cols=102 Identities=22% Similarity=0.177 Sum_probs=82.8
Q ss_pred CcEEEECCCHHHHHHHHHHH-hCCCeEEEEccCCccC--------CC------------CC----------------CHH
Q 013952 163 GKAVVVGGGYIGLELSAALK-INNIDVSMVYPEPWCM--------PR------------LF----------------TAD 205 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~-~~g~~V~li~~~~~~~--------~~------------~~----------------~~~ 205 (433)
.+|+|||+|+.|+.+|..|. +.|.+|+++++.+.+. +. .+ .++
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~e 88 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPE 88 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHHH
Confidence 47999999999999999999 9999999999865321 00 01 236
Q ss_pred HHHHHHHHHHhcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC--ccCh
Q 013952 206 IAAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG--RPLI 264 (433)
Q Consensus 206 ~~~~l~~~l~~~GV--~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~--~p~~ 264 (433)
+.+.+.+.+++.|+ .++++++|.++..++++....|.+.+|+++.+|.||+|+|. +|..
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~ 151 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINF 151 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCC
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCC
Confidence 77788888899998 89999999999885555567899999989999999999994 5543
No 169
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.56 E-value=7.8e-08 Score=90.86 Aligned_cols=101 Identities=22% Similarity=0.340 Sum_probs=77.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC-C-CCC---------HHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP-R-LFT---------ADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~-~-~~~---------~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
+.-+|+|||+|+.|+.+|..|...+.+|+++++.+.+.- + .++ .++.....+.+++.||+++++++|++
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~ 87 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATS 87 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCEEE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEEEE
Confidence 345899999999999999999888899999988765321 0 011 12222345567889999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
++. +.+ .|.+.+|+++.+|.+|+|||.+|...
T Consensus 88 id~--~~~--~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 88 IDP--NNK--LVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEecCCCcCCC
Confidence 986 443 57888999999999999999887653
No 170
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.56 E-value=9.2e-08 Score=91.32 Aligned_cols=120 Identities=17% Similarity=0.182 Sum_probs=69.2
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCC-Cc--c------------------------c-cccC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERP-AL--S------------------------K-AYLF 55 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~-~~--~------------------------~-~~~~ 55 (433)
+++||+|||||++|+++|..|+++|++ |+|+|+...+.... .. . . .+..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~ 98 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRD 98 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEE
Confidence 368999999999999999999999987 99999982111000 00 0 0 0000
Q ss_pred CCCCCCCCCcccc-----cCCCCC----CCCHhHHHh--CCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccC
Q 013952 56 PEGTARLPGFHVC-----VGSGGE----RLLPEWYKE--KGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATG 122 (433)
Q Consensus 56 ~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~--~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG 122 (433)
......+..+... .+.... ..+...+.+ ..++++.++.|..+..++. +|++.+++++.+|.||.|+|
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG 178 (407)
T 3rp8_A 99 FRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADG 178 (407)
T ss_dssp TTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCC
T ss_pred CCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCC
Confidence 0000000000000 000000 011111211 1178889999999887665 45677888999999999999
Q ss_pred CCcc
Q 013952 123 STVL 126 (433)
Q Consensus 123 ~~~~ 126 (433)
....
T Consensus 179 ~~S~ 182 (407)
T 3rp8_A 179 SHSA 182 (407)
T ss_dssp TTCS
T ss_pred cChH
Confidence 7654
No 171
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.56 E-value=3.7e-07 Score=82.91 Aligned_cols=100 Identities=16% Similarity=0.175 Sum_probs=77.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc---------CCC---CCCHHHHHHHHHHHHhc-CcEEEcCCeEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC---------MPR---LFTADIAAFYEGYYANK-GIKIIKGTVAVG 229 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~---------~~~---~~~~~~~~~l~~~l~~~-GV~v~~~~~v~~ 229 (433)
.+++|||+|+.|+.+|..|++.|.+|+++++.+.. .+. ....++.+.+.+.+++. +++++.. ++.+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~ 81 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYPTIHWVEG-RVTD 81 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEES-CEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEe-EEEE
Confidence 47999999999999999999999999999864321 011 11246777888888876 7888755 8999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
+...+ ....+.+.+++++.+|.+|+|+|.+|+..
T Consensus 82 i~~~~--~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 82 AKGSF--GEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp EEEET--TEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred EEEcC--CeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 98732 33678888998999999999999887543
No 172
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.56 E-value=3.5e-07 Score=83.70 Aligned_cols=101 Identities=15% Similarity=0.188 Sum_probs=79.5
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCC--ccC---------C--CCCCHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEP--WCM---------P--RLFTADIAAFYEGYYANKGIKIIKGTVAVGF 230 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~--~~~---------~--~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i 230 (433)
+++|||+|+.|+.+|..|++.|.+|+++++.. .+. . ....+++.+.+.+.+++.|++++.++++..+
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i 82 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKL 82 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEE
Confidence 68999999999999999999999999996531 110 0 0012577888888899999999999999999
Q ss_pred EecCC-CcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 231 TTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 231 ~~~~~-g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
....+ +....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 83 ~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 83 IPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp ECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 75322 23467888888889999999999987754
No 173
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.55 E-value=2.5e-07 Score=87.05 Aligned_cols=33 Identities=15% Similarity=0.379 Sum_probs=31.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++||+|||||++|+++|++|+++|++ |+|+|+.
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~---V~vle~~ 34 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLN---VLMTDAH 34 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEecC
Confidence 48999999999999999999999987 9999998
No 174
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.55 E-value=1.1e-07 Score=91.62 Aligned_cols=100 Identities=21% Similarity=0.326 Sum_probs=79.1
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCCccCCC----------CCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR----------LFTADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~---~g~~V~li~~~~~~~~~----------~~~~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+.-. ....++...+.+.+++.||+++. .++++
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~ 83 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIA-QSAEQ 83 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEEC-SCEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEE-eEEEE
Confidence 689999999999999999999 79999999998764211 11234444567788889999985 58999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
++. +++ .|.+.+|+++.+|.+|+|+|.+|+...+
T Consensus 84 id~--~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~i 117 (437)
T 3sx6_A 84 IDA--EAQ--NITLADGNTVHYDYLMIATGPKLAFENV 117 (437)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCCEECGGGS
T ss_pred EEc--CCC--EEEECCCCEEECCEEEECCCCCcCcccC
Confidence 976 333 5778888889999999999999876543
No 175
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.54 E-value=3.6e-08 Score=94.11 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=31.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~ 40 (433)
++||+|||||++|+++|++|+++ |++ |+|||+.
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~---V~vlE~~ 70 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRS---LLLVEEG 70 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCe---EEEEeCC
Confidence 48999999999999999999999 987 9999997
No 176
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.54 E-value=4.9e-09 Score=100.77 Aligned_cols=53 Identities=23% Similarity=0.243 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 205 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 205 ~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
.+.....+..+..+.+++++++|++|..+ ++.+ .|.+.+|+ +.+|.||+|++.
T Consensus 204 g~~~l~~~l~~~l~~~v~~~~~V~~i~~~-~~~v-~v~~~~g~-~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 204 GTQAMFEHLNATLEHPAERNVDITRITRE-DGKV-HIHTTDWD-RESDVLVLTVPL 256 (424)
T ss_dssp CHHHHHHHHHHHSSSCCBCSCCEEEEECC-TTCE-EEEESSCE-EEESEEEECSCH
T ss_pred hHHHHHHHHHHhhcceEEcCCEEEEEEEE-CCEE-EEEECCCe-EEcCEEEECCCH
Confidence 34444455555666788999999999873 3343 58888874 899999999985
No 177
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.54 E-value=6.1e-07 Score=89.49 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEECCEEEEcccCc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGR 261 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~g~--~i~~d~vi~a~G~~ 261 (433)
...+...+.+.+++.||++++++.+.++..++++++.+|.. .+|+ .+.++.||+|+|..
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 35677788888888999999999999998743677777764 4564 58999999999953
No 178
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.54 E-value=3.4e-07 Score=89.76 Aligned_cols=34 Identities=18% Similarity=0.489 Sum_probs=31.7
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+++||+|||||++|+++|+.|+++|++ |+|+|+.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~---V~llE~~ 35 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLS---VLMLEAQ 35 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCC---EEEEECC
Confidence 368999999999999999999999987 9999997
No 179
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.53 E-value=6.4e-07 Score=84.59 Aligned_cols=99 Identities=26% Similarity=0.286 Sum_probs=81.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCC----------------------------------------
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL---------------------------------------- 201 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~---------------------------------------- 201 (433)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+......
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 4689999999999999999999999999999865432100
Q ss_pred ---C-----------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 202 ---F-----------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 202 ---~-----------~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
+ ...+.+.+.+.+++.||+++++++|++++. ++ .|++.+|+++.+|.||.|+|..+...
T Consensus 91 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s~vr 163 (379)
T 3alj_A 91 VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGSKVR 163 (379)
T ss_dssp EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTCHHH
T ss_pred eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccHHHH
Confidence 0 045577788888889999999999999986 44 57788888999999999999877553
No 180
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.53 E-value=7.8e-07 Score=86.26 Aligned_cols=103 Identities=17% Similarity=0.227 Sum_probs=78.4
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCe---EEEEccCCccC--------------------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKI---NNID---VSMVYPEPWCM-------------------------------------- 198 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~---~g~~---V~li~~~~~~~-------------------------------------- 198 (433)
++|+|||+|+.|+.+|..|.+ .|.+ |+++++.+.+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 589999999999999999999 9999 99999865321
Q ss_pred ------------CCC-CCHHHHHHHHHHHHhcCcE--EEcCCeEEEEEecCCCcEEEEEeCC---C--cEEECCEEEEcc
Q 013952 199 ------------PRL-FTADIAAFYEGYYANKGIK--IIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADIVVVGV 258 (433)
Q Consensus 199 ------------~~~-~~~~~~~~l~~~l~~~GV~--v~~~~~v~~i~~~~~g~~~~v~~~~---g--~~i~~d~vi~a~ 258 (433)
+.+ -..++.+.+.+.+++.|++ ++++++|.++...+++....|.+.+ | .++.+|.||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAt 162 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCT 162 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECC
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECC
Confidence 000 0145667788888888998 9999999999874433244566544 4 578999999999
Q ss_pred c--CccChh
Q 013952 259 G--GRPLIS 265 (433)
Q Consensus 259 G--~~p~~~ 265 (433)
| .+|+..
T Consensus 163 G~~s~p~~p 171 (464)
T 2xve_A 163 GHFSTPYVP 171 (464)
T ss_dssp CSSSSBCCC
T ss_pred CCCCCCccC
Confidence 9 677654
No 181
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.52 E-value=6.5e-07 Score=85.00 Aligned_cols=100 Identities=14% Similarity=0.144 Sum_probs=79.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC--------------C---C---C---------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------------P---R---L--------------------- 201 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~--------------~---~---~--------------------- 201 (433)
..|+|||+|+.|+.+|..+++.|.+|+++++.+.+. . . +
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 84 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDFI 84 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHHH
Confidence 479999999999999999999999999999865320 0 0 0
Q ss_pred ----------------------CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC---CCcEEEEEeCCCcEEECCEEEE
Q 013952 202 ----------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA---DGEVKEVKLKDGRTLEADIVVV 256 (433)
Q Consensus 202 ----------------------~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~---~g~~~~v~~~~g~~i~~d~vi~ 256 (433)
...++.+.+.+.+++.||+++++++|+++..++ ++. ..|.+.++ ++.+|.||+
T Consensus 85 ~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g-~i~ad~VVl 162 (401)
T 2gqf_A 85 SLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNST-QWQCKNLIV 162 (401)
T ss_dssp HHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTE-EEEESEEEE
T ss_pred HHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCC-EEECCEEEE
Confidence 134566778888889999999999999998631 233 46777776 799999999
Q ss_pred cccCccCh
Q 013952 257 GVGGRPLI 264 (433)
Q Consensus 257 a~G~~p~~ 264 (433)
|+|..+..
T Consensus 163 AtG~~s~p 170 (401)
T 2gqf_A 163 ATGGLSMP 170 (401)
T ss_dssp CCCCSSCG
T ss_pred CCCCccCC
Confidence 99988743
No 182
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.51 E-value=2.8e-07 Score=91.96 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=31.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc------CCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ------GVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~------g~~~~~V~lie~~ 40 (433)
.+||+|||||+||+++|..|++. |++ |+|||+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~---V~vlEk~ 73 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLR---VCLVEKA 73 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCC---EEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCc---EEEEeCC
Confidence 48999999999999999999998 887 9999998
No 183
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.51 E-value=1.6e-07 Score=91.09 Aligned_cols=99 Identities=13% Similarity=0.224 Sum_probs=74.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||++|+.+|..|++.|.+ |+++++..... +.... .....+.+.+++.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~---V~lv~~~~~~l------------------~~~~~----~~~~~l~~~l~~~ 221 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAE---VIVLEYMDRIL------------------PTMDL----EVSRAAERVFKKQ 221 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSC------------------TTSCH----HHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCE---EEEEecCCccc------------------cccCH----HHHHHHHHHHHHC
Confidence 36899999999999999999999876 99999881111 00000 0012345667788
Q ss_pred CcEEEeCceEEEEECCCCE--EEeCCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++.+++. +.+.+++++++|.+|+|+|.+|..+
T Consensus 222 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 222 GLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred CCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 9999999999999876554 4455788899999999999988653
No 184
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.51 E-value=3.5e-07 Score=84.69 Aligned_cols=99 Identities=12% Similarity=0.148 Sum_probs=76.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEcc----CCcc------------CCC----CCCHHHHHHHHHHHHhcCcEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYP----EPWC------------MPR----LFTADIAAFYEGYYANKGIKII 222 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~----~~~~------------~~~----~~~~~~~~~l~~~l~~~GV~v~ 222 (433)
.+++|||+|+.|+.+|..|++.|.+|+++++ .... .+. ....++.+.+.+.+++.|++++
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~ 88 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTIF 88 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEEE
Confidence 4799999999999999999999999999987 1111 111 1134777888888899999999
Q ss_pred cCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 223 KGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 223 ~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
.++ +..+... +....|.+ ++.++.+|.+|+|+|.+|...
T Consensus 89 ~~~-v~~i~~~--~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 89 TET-VTKVDFS--SKPFKLFT-DSKAILADAVILAIGAVAKRL 127 (333)
T ss_dssp CCC-CCEEECS--SSSEEEEC-SSEEEEEEEEEECCCEEECCC
T ss_pred EeE-EEEEEEc--CCEEEEEE-CCcEEEcCEEEECCCCCcCCC
Confidence 986 8888762 22245666 777899999999999877543
No 185
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.50 E-value=1.7e-06 Score=85.15 Aligned_cols=104 Identities=14% Similarity=0.231 Sum_probs=81.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC--ccC-----------CCCCCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP--WCM-----------PRLFTADIAAFYEGYYANKGIKIIKGTVA 227 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~--~~~-----------~~~~~~~~~~~l~~~l~~~GV~v~~~~~v 227 (433)
...+++|||+|+.|+.+|..|++.|.+|+++++.. .+. +....+++.+.+.+.+++.||+++.++++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v 290 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSA 290 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEcCCEE
Confidence 35579999999999999999999999999997531 111 01123578888889999999999999999
Q ss_pred EEEEecCC-CcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 228 VGFTTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 228 ~~i~~~~~-g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
.++....+ +....|.+.+|+++.+|.+|+|+|.+|..
T Consensus 291 ~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 291 SKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp EEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 99975221 23467888888899999999999987654
No 186
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.50 E-value=6.5e-07 Score=82.56 Aligned_cols=101 Identities=16% Similarity=0.142 Sum_probs=77.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-----------cCCCC----CCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPRL----FTADIAAFYEGYYANKGIKIIKGTVA 227 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~-----------~~~~~----~~~~~~~~l~~~l~~~GV~v~~~~~v 227 (433)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+.+ ...++.+.+.+.+++.|++++. .++
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v 87 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEV 87 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE-CCE
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe-eeE
Confidence 4799999999999999999999999999987621 01111 1246777888888999999998 588
Q ss_pred EEEEecC-CCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 228 VGFTTNA-DGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 228 ~~i~~~~-~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
.++.... ++....+.+.+|+++.+|.+|+|+|.+|..
T Consensus 88 ~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 88 QGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp EEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred EEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 8888731 221135666778899999999999987754
No 187
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.47 E-value=6.9e-07 Score=88.16 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=38.8
Q ss_pred CCCcEEeCCCCCCCCCCeEEcCccccccccccCccc-ccccHHHHHHHHHHHHHHHhcc
Q 013952 274 NKGGIETDDFFKTSADDVYAVGDVATFPMKLYREMR-RVEHVDHARKSAEQAVKTIMAT 331 (433)
Q Consensus 274 ~~g~i~vd~~~~t~~~~vfa~Gd~~~~~~~~~~~~~-~~~~~~~A~~~g~~aa~~i~~~ 331 (433)
..|+|.+|.+.||++|++||+|+|+.... +|..+ .-.+...+.--|+.|++++...
T Consensus 353 t~GGi~vd~~~~t~I~GLyAaGE~a~~g~--hGanrl~gnsl~~~~vfG~~Ag~~aa~~ 409 (540)
T 1chu_A 353 TCGGVMVDDHGRTDVEGLYAIGEVSYTGL--HGANRMASNSLLECLVYGWSAAEDITRR 409 (540)
T ss_dssp ESCEEECCTTCBCSSBTEEECGGGEECSS--STTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCcEEECCCCCCccCCEEeccccccccc--cCCCcCcchhHHHHHHHHHHHHHHHHHh
Confidence 56999999999999999999999984211 11111 1123455666788888887654
No 188
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.47 E-value=1.1e-06 Score=80.23 Aligned_cols=100 Identities=15% Similarity=0.111 Sum_probs=70.9
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc----------cC--CCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW----------CM--PRLFTADIAAFYEGYYANKGIKIIKGTVAVGFT 231 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~----------~~--~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~ 231 (433)
.|+|||+|+.|+.+|..+++.|.+|+++++... +. +...++++.+...+.+.+.+...+....+..+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMIT 87 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEee
Confidence 689999999999999999999999999986431 11 011234566666665655554444444555655
Q ss_pred ecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 232 TNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 232 ~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
..++ ....+.+.+|+++.+|.+|+|||.+|..
T Consensus 88 ~~~~-~~~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 88 KQST-GLFEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp ECTT-SCEEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred ecCC-CcEEEEECCCCEEEeCEEEEccCCcccc
Confidence 4233 3357888999999999999999987754
No 189
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.46 E-value=8.2e-07 Score=87.69 Aligned_cols=102 Identities=12% Similarity=0.125 Sum_probs=81.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-------------------------C----------CC-CCHHH
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------P----------RL-FTADI 206 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~-------------------------~----------~~-~~~~~ 206 (433)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + .+ ..+++
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ei 89 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEM 89 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHHH
Confidence 479999999999999999999999999999875320 0 00 12577
Q ss_pred HHHHHHHHHhcCc--EEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEccc--CccCh
Q 013952 207 AAFYEGYYANKGI--KIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVG--GRPLI 264 (433)
Q Consensus 207 ~~~l~~~l~~~GV--~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G--~~p~~ 264 (433)
.+.+.+.+++.|+ .++++++|.+++.++++....|.+.+|+++.+|.||+|+| .+|+.
T Consensus 90 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~~ 151 (545)
T 3uox_A 90 LRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASRM 151 (545)
T ss_dssp HHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC---
T ss_pred HHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCcC
Confidence 7888888888888 8999999999987555556789999998999999999999 55554
No 190
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.45 E-value=1.3e-06 Score=81.95 Aligned_cols=98 Identities=19% Similarity=0.275 Sum_probs=76.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCC------c------c-CCC---------------------------C
Q 013952 163 GKAVVVGGGYIGLELSAALKINNI-DVSMVYPEP------W------C-MPR---------------------------L 201 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~-~V~li~~~~------~------~-~~~---------------------------~ 201 (433)
.+++|||+|+.|+.+|..|++.|. +|+++++.+ . + .+. .
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 84 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEH 84 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCCSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhccccccccccccccC
Confidence 479999999999999999999999 999998764 0 0 000 0
Q ss_pred -CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 202 -FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 202 -~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
...++.+.+.+.+++.|++++++++|.++...+++ ..|.+.++ ++.+|.||+|+|..+.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAY--YTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCe--EEEEeCCC-EEEeCEEEECCCCCCc
Confidence 01356667777888899999999999999873323 46777776 6899999999998654
No 191
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.45 E-value=3.1e-07 Score=84.11 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=31.1
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~ 40 (433)
.+||+|||||++|+++|.+|+++ |++ |+|+|+.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~---V~LiEk~ 113 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLR---ITIVEAG 113 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSC---EEEEESS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCE---EEEEeCC
Confidence 58999999999999999999997 877 9999998
No 192
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.44 E-value=1.5e-07 Score=84.61 Aligned_cols=33 Identities=21% Similarity=0.413 Sum_probs=31.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++||+|||||||||+||..|+++|++ |+|+|+.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 38999999999999999999999998 9999998
No 193
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.44 E-value=3.8e-06 Score=82.23 Aligned_cols=56 Identities=21% Similarity=0.234 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHhcC-cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 203 TADIAAFYEGYYANKG-IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~G-V~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
...+.+.+.+.+++.| ++++++++|++|...+++ ..|.+.+|+++.+|.||+|+|.
T Consensus 254 ~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 254 QSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDA--ARVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSS--EEEEETTCCEEEEEEEEECCCG
T ss_pred HHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEECCCH
Confidence 3578888888899998 999999999999873333 5688888888999999999995
No 194
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.44 E-value=3.4e-07 Score=92.20 Aligned_cols=37 Identities=22% Similarity=0.336 Sum_probs=34.1
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|++..+||||||||.||++||++|++.|.+ |+|||+.
T Consensus 1 M~~~~~DVvVIGgG~AGL~AAl~aae~G~~---V~vlEK~ 37 (660)
T 2bs2_A 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLS---TIVLSLI 37 (660)
T ss_dssp CCEEECSEEEECCSHHHHHHHHHHHTTTCC---EEEECSS
T ss_pred CCcccccEEEECchHHHHHHHHHHHHCCCc---EEEEecc
Confidence 665578999999999999999999999987 9999998
No 195
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.44 E-value=9.6e-07 Score=81.13 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=75.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-----------cCCC----CCCHHHHHHHHHHHHhcCcEEEcCCeE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR----LFTADIAAFYEGYYANKGIKIIKGTVA 227 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~-----------~~~~----~~~~~~~~~l~~~l~~~GV~v~~~~~v 227 (433)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+. ....++.+.+.+.+++.|++++.++ +
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v 84 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH-I 84 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC-E
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee-e
Confidence 4799999999999999999999999999985310 0111 1235777888888899999999986 8
Q ss_pred EEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 228 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 228 ~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
..++. ++....+ +.++.++.+|.+|+|+|.+|..
T Consensus 85 ~~i~~--~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 85 NKVDL--QNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp EEEEC--SSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred eEEEe--cCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 88876 2222344 5677789999999999987654
No 196
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.44 E-value=8.5e-08 Score=92.20 Aligned_cols=96 Identities=21% Similarity=0.329 Sum_probs=72.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCccCCCCC----------CHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMPRLF----------TADIAAFYEGYYANKGIKIIKGTVAVGF 230 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g--~~V~li~~~~~~~~~~~----------~~~~~~~l~~~l~~~GV~v~~~~~v~~i 230 (433)
|+|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+.-... .+++...+.+.+++.||+++.+ +|++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~-~v~~I 81 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEe-EEEEE
Confidence 68999999999999999999865 78999998875431101 1112222345567789999876 68999
Q ss_pred EecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 231 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 231 ~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
+. +.+ .|++++|+++++|.+|+|+|.++.
T Consensus 82 d~--~~~--~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEE
T ss_pred EC--CCC--EEEECCCCEEECCEEEEeCCCCcc
Confidence 86 443 578899999999999999998653
No 197
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=2.4e-07 Score=86.95 Aligned_cols=99 Identities=22% Similarity=0.314 Sum_probs=73.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC--C--------CCC-HHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP--R--------LFT-ADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~--~--------~~~-~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
.+.+++|||+|+.|+.+|..|++.| +|+++++.+.... . ..+ .++.....+.+++.||+++.++++..
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v~~ 85 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKL 85 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHTEEEECSCCEEE
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCCcEEEECCEEEE
Confidence 4679999999999999999999999 9999998764211 0 001 11222234567788999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
++. +.+ .|. .+|+++.+|.+|+|||.+|+..
T Consensus 86 id~--~~~--~V~-~~g~~~~~d~lViATGs~p~~p 116 (367)
T 1xhc_A 86 IDR--GRK--VVI-TEKGEVPYDTLVLATGARAREP 116 (367)
T ss_dssp EET--TTT--EEE-ESSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEE-ECCcEEECCEEEECCCCCCCCC
Confidence 976 333 344 5677899999999999888653
No 198
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.43 E-value=3.6e-07 Score=89.98 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=35.4
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccC
Q 013952 83 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATG 122 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG 122 (433)
+.++++..++.|..|+.+++.+++.+|+++.||++|.++-
T Consensus 234 ~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 234 KEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp GGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSC
T ss_pred hcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCC
Confidence 4577888999999999999999999999999999997754
No 199
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.42 E-value=9.6e-07 Score=84.19 Aligned_cols=97 Identities=16% Similarity=0.293 Sum_probs=74.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-+|..|++.|.+ |+++++...+..+. ++ ......+.+.+++.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~~--------------~~-------~~~~~~l~~~l~~~ 200 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVH---VSLVETQPRLMSRA--------------AP-------ATLADFVARYHAAQ 200 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTTT--------------SC-------HHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCCcccccc--------------cC-------HHHHHHHHHHHHHc
Confidence 46899999999999999999999876 99999882111100 00 00012345677889
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+.+++ ++ .|.+.+|+++++|.+|+|+|..|..
T Consensus 201 GV~i~~~~~v~~i~-~~-~v~~~~g~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 201 GVDLRFERSVTGSV-DG-VVLLDDGTRIAADMVVVGIGVLAND 241 (408)
T ss_dssp TCEEEESCCEEEEE-TT-EEEETTSCEEECSEEEECSCEEECC
T ss_pred CcEEEeCCEEEEEE-CC-EEEECCCCEEEcCEEEECcCCCccH
Confidence 99999999999998 44 8888888899999999999988753
No 200
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.42 E-value=2e-06 Score=84.64 Aligned_cols=61 Identities=18% Similarity=0.310 Sum_probs=51.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
...+.+.+.+.+++.|++++.+ +|+++..++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 172 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 172 ADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 3567788888888899999999 999998755677778999888889999999999976543
No 201
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.41 E-value=1.7e-06 Score=79.56 Aligned_cols=98 Identities=13% Similarity=0.120 Sum_probs=75.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-----------cCCC---CCCHHHHHHHHHHHHhcCcEEEcCCeEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-----------CMPR---LFTADIAAFYEGYYANKGIKIIKGTVAV 228 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~-----------~~~~---~~~~~~~~~l~~~l~~~GV~v~~~~~v~ 228 (433)
.+++|||+|+.|+.+|..|++.|.+|+++++... ..+. ....++.+.+.+.+++.|++++. .++.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~ 95 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREG-VEVR 95 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEET-CCEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEE-eeEE
Confidence 5799999999999999999999999999987421 0111 11256777888888999999998 6888
Q ss_pred EEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 229 GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 229 ~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
+++.. +....|.+ ++.++.+|.+|+|+|.+|..
T Consensus 96 ~i~~~--~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 96 SIKKT--QGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp EEEEE--TTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred EEEEe--CCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 88762 22244666 55689999999999987654
No 202
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.41 E-value=3.8e-07 Score=90.70 Aligned_cols=58 Identities=21% Similarity=0.248 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC---CCc--EEECCEEEEcccCc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGR 261 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~g~--~i~~d~vi~a~G~~ 261 (433)
+..+...+.+.+++.|++++++++|+++.. +++++..|.+. +|+ ++.||.||+|+|..
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 567777788888999999999999999987 35566667653 333 69999999999965
No 203
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.40 E-value=5.1e-07 Score=87.26 Aligned_cols=99 Identities=21% Similarity=0.271 Sum_probs=73.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.++++|||||++|+.+|..|++.|.+ |+++++...+..+ . ++ ......+.+.+++.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~------~--------~~-------~~~~~~l~~~l~~~ 204 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKK---VTVIDILDRPLGV------Y--------LD-------KEFTDVLTEEMEAN 204 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTT------T--------CC-------HHHHHHHHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCe---EEEEecCcccccc------c--------CC-------HHHHHHHHHHHHhC
Confidence 57999999999999999999999876 9999988211110 0 00 00012345667788
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++.+++ .+.+ ++.++++|.+|+|+|.+|..+
T Consensus 205 gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 205 NITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp TEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCG
T ss_pred CCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChH
Confidence 999999999999987643 2455 556899999999999988654
No 204
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=3.9e-07 Score=88.28 Aligned_cols=97 Identities=19% Similarity=0.237 Sum_probs=72.1
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++...... ... . .....+.+.+++.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~--~~~---------~-----------~~~~~l~~~l~~~ 225 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQ---VSVVEARERILP--TYD---------S-----------ELTAPVAESLKKL 225 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSST--TSC---------H-----------HHHHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEEcCCcccc--ccC---------H-----------HHHHHHHHHHHHC
Confidence 36899999999999999999999876 999998811110 000 0 0012345667788
Q ss_pred CcEEEeCceEEEEECCCCEEEeC--CC--cEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASKTLLSA--TG--LIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~--~~--~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++. ++ +.+. +| .++.+|.+++|+|.+|..+
T Consensus 226 gv~i~~~~~v~~i~~-~~-v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 226 GIALHLGHSVEGYEN-GC-LLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp TCEEETTCEEEEEET-TE-EEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred CCEEEECCEEEEEEe-CC-EEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 999999999999987 44 4333 45 5899999999999988754
No 205
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.39 E-value=1.6e-06 Score=83.70 Aligned_cols=102 Identities=21% Similarity=0.137 Sum_probs=76.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEccCCccC----CC---------------------------------C
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCM----PR---------------------------------L 201 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~--~V~li~~~~~~~----~~---------------------------------~ 201 (433)
...+|+|||+|+.|+.+|..|++.|. +|+++++.+.+. .. .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35789999999999999999999999 999998764220 00 0
Q ss_pred --------------C--------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc---
Q 013952 202 --------------F--------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--- 247 (433)
Q Consensus 202 --------------~--------------~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---g~--- 247 (433)
+ ..++.+.+.+.+++.++.++++++|++++.. +....|++.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~--~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKK--DGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEE--TTEEEEEEEESSTTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeC--CCeEEEEEeecCCCCeeE
Confidence 0 1245666777777778889999999999873 2234566654 66
Q ss_pred EEECCEEEEcccC--ccCh
Q 013952 248 TLEADIVVVGVGG--RPLI 264 (433)
Q Consensus 248 ~i~~d~vi~a~G~--~p~~ 264 (433)
++.+|.||+|+|. .|+.
T Consensus 163 ~~~~d~VVvAtG~~s~p~~ 181 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYI 181 (447)
T ss_dssp EEEESEEEECCCSSSSBCB
T ss_pred EEEeCEEEECCCCCCCCCC
Confidence 7999999999997 6654
No 206
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.39 E-value=1.2e-06 Score=81.23 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=76.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC---cc--------CCC----CCCHHHHHHHHHHHHhcCcEEEcCCe
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP---WC--------MPR----LFTADIAAFYEGYYANKGIKIIKGTV 226 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~---~~--------~~~----~~~~~~~~~l~~~l~~~GV~v~~~~~ 226 (433)
..+++|||+|+.|+.+|..|++.|.+|+++++.. .+ .+. ....++.+.+.+.+++.|++++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~- 92 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRMED- 92 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-
Confidence 4589999999999999999999999999998531 10 111 1125777888888889999999987
Q ss_pred EEEEEecCCCcEEEE-EeCCCcEEECCEEEEcccCccCh
Q 013952 227 AVGFTTNADGEVKEV-KLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 227 v~~i~~~~~g~~~~v-~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
+.+++. .+. ..+ .+.+++++.+|.+|+|+|.+|..
T Consensus 93 v~~i~~-~~~--~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 93 VESVSL-HGP--LKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp EEEEEC-SSS--SEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred EEEEEe-CCc--EEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 888875 222 345 67788899999999999987654
No 207
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.38 E-value=5.6e-07 Score=85.74 Aligned_cols=97 Identities=16% Similarity=0.344 Sum_probs=74.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEccCCccCC-------CC-----CCHHHHHHHHHHHHhcCcEEEcCCeEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMP-------RL-----FTADIAAFYEGYYANKGIKIIKGTVAV 228 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~--~V~li~~~~~~~~-------~~-----~~~~~~~~l~~~l~~~GV~v~~~~~v~ 228 (433)
++++|||+|+.|+.+|..|++.|. +|+++++.+...- .+ ...++.....+.+++.+|+++. +++.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~-~~v~ 80 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELIS-DRMV 80 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEEC-CCEE
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEE-EEEE
Confidence 689999999999999999999998 8999988753210 00 0112223345667889999999 8999
Q ss_pred EEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 229 GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 229 ~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
+++. +++ .+.+.+|+++.+|.+|+|||.+|..
T Consensus 81 ~id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~ 112 (404)
T 3fg2_P 81 SIDR--EGR--KLLLASGTAIEYGHLVLATGARNRM 112 (404)
T ss_dssp EEET--TTT--EEEESSSCEEECSEEEECCCEEECC
T ss_pred EEEC--CCC--EEEECCCCEEECCEEEEeeCCCccC
Confidence 9986 443 5778888899999999999987754
No 208
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.38 E-value=3.5e-06 Score=84.01 Aligned_cols=101 Identities=21% Similarity=0.246 Sum_probs=78.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC-----------------------------------------
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR----------------------------------------- 200 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~----------------------------------------- 200 (433)
...|+|||+|..|+.+|..+++.|.+|+++++.+.....
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 358999999999999999999999999999876432100
Q ss_pred ----------------------------------------------CCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC
Q 013952 201 ----------------------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNA 234 (433)
Q Consensus 201 ----------------------------------------------~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~ 234 (433)
.....+.+.+.+.+++.||+++++++|+++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 0012455667777888999999999999998744
Q ss_pred CCcEEEEEeC--CCc--EEECCEEEEcccCcc
Q 013952 235 DGEVKEVKLK--DGR--TLEADIVVVGVGGRP 262 (433)
Q Consensus 235 ~g~~~~v~~~--~g~--~i~~d~vi~a~G~~p 262 (433)
++++..|... +|+ ++.+|.||+|+|...
T Consensus 286 ~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 286 KGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp TSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred CCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 4777767664 565 689999999999643
No 209
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.38 E-value=7.8e-07 Score=84.66 Aligned_cols=101 Identities=25% Similarity=0.352 Sum_probs=74.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCccCCCCCCHHHHH---------HHHHHHHhcCcEEEcCCeEEEE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMPRLFTADIAA---------FYEGYYANKGIKIIKGTVAVGF 230 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g--~~V~li~~~~~~~~~~~~~~~~~---------~l~~~l~~~GV~v~~~~~v~~i 230 (433)
+|+|+|||+|+.|+.+|..|++.+ .+|+++++.+..........+.. .-.+.+.+.||+++.+ +|++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~gv~~i~~-~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHGIQVVHD-SALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTTCEEECS-CEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCCCEEEEe-EEEEE
Confidence 689999999999999999998866 58999998775432211111110 1123456789999866 68888
Q ss_pred EecCCCcEEEEEeCCCcEEECCEEEEcccCccChhhh
Q 013952 231 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 231 ~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
+. +.+ .+.+.+|+++.+|.+|+|+|.+++...+
T Consensus 81 d~--~~~--~v~~~~g~~i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 81 DP--DKK--LVKTAGGAEFAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp ET--TTT--EEEETTSCEEECSEEEECCCEEECGGGS
T ss_pred Ec--cCc--EEEecccceeecceeeeccCCccccCCc
Confidence 76 443 5778899999999999999998876543
No 210
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.38 E-value=1.5e-06 Score=82.88 Aligned_cols=32 Identities=25% Similarity=0.521 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+|+||||||+||++|..|+++|++ |+|+|+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIK---VTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC---EEEEecC
Confidence 4899999999999999999999998 9999998
No 211
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.37 E-value=1e-06 Score=84.69 Aligned_cols=101 Identities=27% Similarity=0.428 Sum_probs=75.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC--eEEEEccCCccCC-------CCC-----CHHHHHHHHHHHHhcCcEEEcCCeE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWCMP-------RLF-----TADIAAFYEGYYANKGIKIIKGTVA 227 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~--~V~li~~~~~~~~-------~~~-----~~~~~~~l~~~l~~~GV~v~~~~~v 227 (433)
..+++|||+|+.|+.+|..|++.|. +|+++++.+.+.- .+. ..++.....+.+++.||+++.++.|
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 4689999999999999999999998 7999987654210 000 0111112245677899999999999
Q ss_pred EEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccChhh
Q 013952 228 VGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLISL 266 (433)
Q Consensus 228 ~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~~ 266 (433)
..++. +++ .|.+.+|+++.+|.+|+|+|.+|+...
T Consensus 84 ~~i~~--~~~--~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 84 TAINR--DRQ--QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp EEEET--TTT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred EEEEC--CCC--EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 99986 333 577788889999999999998886543
No 212
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.37 E-value=2.7e-07 Score=88.16 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=74.9
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCCccCCC----------CCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMPR----------LFTADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~---~g~~V~li~~~~~~~~~----------~~~~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+... ....++...+.+.+++.|++++.+ ++.+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~ 80 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEG-TVEK 80 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEEC-EEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEe-eEEE
Confidence 479999999999999999999 89999999987653210 012344455677778899999988 8899
Q ss_pred EEecCCCcEEEEEeCCCc----EEECCEEEEcccCccChh
Q 013952 230 FTTNADGEVKEVKLKDGR----TLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~----~i~~d~vi~a~G~~p~~~ 265 (433)
++. +++ .|.+.+++ ++.+|.+|+|+|.+|+..
T Consensus 81 i~~--~~~--~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 81 IDA--KSS--MVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp EET--TTT--EEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred EeC--CCC--EEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 876 443 35555554 499999999999988764
No 213
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.37 E-value=1.9e-06 Score=81.83 Aligned_cols=101 Identities=17% Similarity=0.158 Sum_probs=79.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC----------------------------------------C--
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP----------------------------------------R-- 200 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~----------------------------------------~-- 200 (433)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~ 86 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGEL 86 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCCE
Confidence 4799999999999999999999999999987643200 0
Q ss_pred -----------------CCCHHHHHHHHHHHHhc-CcEEEcCCeEEEEEecCCCcEE-EEEeCCCcEEECCEEEEcccCc
Q 013952 201 -----------------LFTADIAAFYEGYYANK-GIKIIKGTVAVGFTTNADGEVK-EVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 201 -----------------~~~~~~~~~l~~~l~~~-GV~v~~~~~v~~i~~~~~g~~~-~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
.....+.+.+.+.+++. |++++++++|++++.+++ .+. .+++.+|+++.+|.||.|.|..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~-~v~g~v~~~~g~~~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 87 LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER-HAIDQVRLNDGRVLRPRVVVGADGIA 165 (399)
T ss_dssp EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECCCTT
T ss_pred EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC-ceEEEEEECCCCEEECCEEEECCCCC
Confidence 01125566777777777 999999999999987433 332 6888888899999999999987
Q ss_pred cCh
Q 013952 262 PLI 264 (433)
Q Consensus 262 p~~ 264 (433)
+..
T Consensus 166 s~v 168 (399)
T 2x3n_A 166 SYV 168 (399)
T ss_dssp CHH
T ss_pred hHH
Confidence 654
No 214
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.37 E-value=1.1e-06 Score=83.03 Aligned_cols=99 Identities=14% Similarity=0.201 Sum_probs=74.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||+|+.|+.+|..|++.|.+ |+++++...+..+ . .+. .....+.+.+++.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~~~~------~--------~~~-------~~~~~l~~~l~~~ 200 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQ---LDVVAPCEQVMPG------L--------LHP-------AAAKAVQAGLEGL 200 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSSTT------T--------SCH-------HHHHHHHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecCcchhhc------c--------cCH-------HHHHHHHHHHHHc
Confidence 46899999999999999999999876 9999988211110 0 000 0012345667788
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++.++. .+.+.+++++++|.+|+|+|..|..
T Consensus 201 gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 201 GVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp TCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred CCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCH
Confidence 999999999999876544 5677788899999999999988764
No 215
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.37 E-value=4.6e-07 Score=86.55 Aligned_cols=37 Identities=16% Similarity=0.393 Sum_probs=30.8
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|| ..+||+|||||++|+++|..|++.|.++ |+|+|+.
T Consensus 1 M~-~~~dVvIVGaG~aGl~~A~~L~~~G~~~--v~v~E~~ 37 (410)
T 3c96_A 1 MS-EPIDILIAGAGIGGLSCALALHQAGIGK--VTLLESS 37 (410)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCSE--EEEEESS
T ss_pred CC-CCCeEEEECCCHHHHHHHHHHHhCCCCe--EEEEECC
Confidence 55 4689999999999999999999987532 8999998
No 216
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.37 E-value=2.4e-07 Score=89.02 Aligned_cols=98 Identities=20% Similarity=0.346 Sum_probs=75.0
Q ss_pred CcEEEECCCHHHHHHHHHHHh--CCCeEEEEccCCccCCCC----------CCHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKI--NNIDVSMVYPEPWCMPRL----------FTADIAAFYEGYYANKGIKIIKGTVAVGF 230 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~--~g~~V~li~~~~~~~~~~----------~~~~~~~~l~~~l~~~GV~v~~~~~v~~i 230 (433)
++|+|||+|+.|+.+|..|++ .|.+|+++++.+.+.... ...++...+.+.+++.||+++.+ ++..+
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~-~v~~i 81 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINE-KAESI 81 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECS-CEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEE-EEEEE
Confidence 589999999999999999999 789999999987653210 11122223445667789999975 88888
Q ss_pred EecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 231 TTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 231 ~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
+. +.+ .+.+.+++++.+|.+|+|+|.+|+..
T Consensus 82 d~--~~~--~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 82 DP--DAN--TVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ET--TTT--EEEETTCCEEECSEEEECCCCEEECC
T ss_pred EC--CCC--EEEECCCcEEECCEEEEcCCcccccC
Confidence 76 333 57788888899999999999987654
No 217
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.36 E-value=6.5e-07 Score=86.53 Aligned_cols=99 Identities=16% Similarity=0.054 Sum_probs=75.1
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++...... .+.. .....+.+.+++.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~--~~~~--------------------~~~~~l~~~l~~~ 221 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAK---THLFEMFDAPLP--SFDP--------------------MISETLVEVMNAE 221 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSST--TSCH--------------------HHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCE---EEEEEeCCchhh--hhhH--------------------HHHHHHHHHHHHC
Confidence 46899999999999999999999876 999998711110 0000 0012345667788
Q ss_pred CcEEEeCceEEEEECCC---CEEEeCCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++.++ ..+.+.+|+++++|.+|+|+|.+|...
T Consensus 222 Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 222 GPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp SCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred CCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 99999999999998653 257778888899999999999988653
No 218
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.35 E-value=1.5e-06 Score=82.81 Aligned_cols=99 Identities=21% Similarity=0.407 Sum_probs=75.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCe--EEEEccCCccCCC--CCCHHHH---------HHHHHHHHhcCcEEEcCCeEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNID--VSMVYPEPWCMPR--LFTADIA---------AFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~--V~li~~~~~~~~~--~~~~~~~---------~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
++++|||+|+.|+.+|..|.+.|.+ |+++++.+...-. .+...+. ....+.+++.||+++.++++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 82 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTA 82 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHTTCEEEESCCEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHCCCEEEeCCEEEE
Confidence 4899999999999999999999987 9999887643210 0111111 1223456788999999999999
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
++. +.+ .|.+.+|+++.+|.+|+|||.+|...
T Consensus 83 id~--~~~--~v~~~~g~~~~~d~lvlAtG~~p~~~ 114 (410)
T 3ef6_A 83 LDV--QTR--TISLDDGTTLSADAIVIATGSRARTM 114 (410)
T ss_dssp EET--TTT--EEEETTSCEEECSEEEECCCEEECCC
T ss_pred EEC--CCC--EEEECCCCEEECCEEEEccCCcccCC
Confidence 986 332 57788888999999999999877643
No 219
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.35 E-value=2.2e-06 Score=85.25 Aligned_cols=100 Identities=23% Similarity=0.260 Sum_probs=77.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC------------------------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------------------------------------------ 200 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~------------------------------------------ 200 (433)
-.|+|||+|..|+.+|..|++.|.+|+++++.+.....
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~~ 201 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQNDI 201 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCCH
Confidence 37999999999999999999999999999876532100
Q ss_pred ---------------------------------------------CCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC
Q 013952 201 ---------------------------------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD 235 (433)
Q Consensus 201 ---------------------------------------------~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~ 235 (433)
.....+.+.+.+.+++.||+++++++|.++..+++
T Consensus 202 ~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~ 281 (566)
T 1qo8_A 202 KLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD 281 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTT
T ss_pred HHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC
Confidence 00123456677778889999999999999987332
Q ss_pred CcEEEEEeC--CCc--EEECCEEEEcccCcc
Q 013952 236 GEVKEVKLK--DGR--TLEADIVVVGVGGRP 262 (433)
Q Consensus 236 g~~~~v~~~--~g~--~i~~d~vi~a~G~~p 262 (433)
+++..|.+. +|+ .+.+|.||+|+|...
T Consensus 282 g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 282 HSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp SBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred CcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 777767664 665 689999999999544
No 220
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.35 E-value=5.9e-07 Score=89.76 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=31.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+||||||||+||++||.+|++.|.+ |+|||+.
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~---V~vlEK~ 50 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFN---TACVTKL 50 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCc---EEEEecc
Confidence 57999999999999999999999987 9999998
No 221
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.34 E-value=6.7e-07 Score=86.81 Aligned_cols=99 Identities=14% Similarity=0.175 Sum_probs=73.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++....... +. ......+.+.+++.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~~------------------~~----~~~~~~l~~~l~~~ 223 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAE---VTLIEYMPEILPQ------------------GD----PETAALLRRALEKE 223 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSTT------------------SC----HHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEEcCCccccc------------------cC----HHHHHHHHHHHHhc
Confidence 36899999999999999999999876 9999988111100 00 00012345677889
Q ss_pred CcEEEeCceEEEEECCCC--EEEeC-C--Cc--EEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSA-T--GL--IFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~-~--~~--~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++.+++ .+.+. + |+ ++.+|.+++|+|.+|...
T Consensus 224 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 224 GIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 999999999999986554 34544 5 66 899999999999988654
No 222
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.33 E-value=2.3e-06 Score=81.81 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=75.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||+|+.|+.+|..|++.|.+ |+++++...+..+. .+ ......+.+.+++.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~~l~~~--------------~~-------~~~~~~l~~~l~~~ 207 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVN---VTLLEALPRVLARV--------------AG-------EALSEFYQAEHRAH 207 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTTT--------------SC-------HHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCe---EEEEecCCchhhhh--------------cC-------HHHHHHHHHHHHhC
Confidence 46899999999999999999999876 99999882211100 00 00012345667789
Q ss_pred CcEEEeCceEEEEECCCC---EEEeCCCcEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASK---TLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~---~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..+..++. .|.+.+++++.+|.+|+|+|..|..
T Consensus 208 GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 208 GVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp TCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESC
T ss_pred CCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccCh
Confidence 999999999999987543 4778899999999999999998864
No 223
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.33 E-value=7.3e-07 Score=86.49 Aligned_cols=98 Identities=17% Similarity=0.178 Sum_probs=74.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++...+.. .+. . .....+.+.+++.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~---Vtlv~~~~~~l~--~~~---------~-----------~~~~~l~~~l~~~ 220 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSE---VTVVALEDRLLF--QFD---------P-----------LLSATLAENMHAQ 220 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSST--TSC---------H-----------HHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcCCcccc--ccC---------H-----------HHHHHHHHHHHHC
Confidence 36899999999999999999999876 999998711110 000 0 0012345667889
Q ss_pred CcEEEeCceEEEEECCC--CEEEeCCCc-EEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIAS--KTLLSATGL-IFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~--~~v~~~~~~-~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++.++ ..+.+.+|+ ++.+|.+++|+|.+|..
T Consensus 221 gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 221 GIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp TCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 99999999999997643 357778888 89999999999998865
No 224
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.33 E-value=2.7e-06 Score=77.83 Aligned_cols=98 Identities=13% Similarity=0.108 Sum_probs=75.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc--------cC--------CC----CCCHHHHHHHHHHHHhcCcEEEc
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW--------CM--------PR----LFTADIAAFYEGYYANKGIKIIK 223 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~--------~~--------~~----~~~~~~~~~l~~~l~~~GV~v~~ 223 (433)
.|+|||+|+.|+.+|..+++.|.+|+++++... +. +. ...+++.+.+.+.+++.++++..
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~~~ 85 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIIT 85 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEEEE
Confidence 689999999999999999999999999986531 00 01 11257788888889999999876
Q ss_pred CCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 224 GTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 224 ~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
.. +..... +.....+.+.++.++.+|.+|+|||.+|..
T Consensus 86 ~~-v~~~~~--~~~~~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 86 ET-IDHVDF--STQPFKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp CC-EEEEEC--SSSSEEEEETTCCEEEEEEEEECCCEEECC
T ss_pred eE-EEEeec--CCCceEEEECCCeEEEEeEEEEcccccccc
Confidence 64 555554 333355677888899999999999987754
No 225
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.32 E-value=1.7e-06 Score=83.11 Aligned_cols=96 Identities=14% Similarity=0.185 Sum_probs=75.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-.|..+++.|.+ |+++++...... .... .....+.+.+++.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~ll~-----------~~d~-----------~~~~~~~~~l~~~ 201 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDKINK-----------LMDA-----------DMNQPILDELDKR 201 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSCCST-----------TSCG-----------GGGHHHHHHHHHT
T ss_pred CcEEEEECCccchhhhHHHHHhcCCc---ceeeeeeccccc-----------cccc-----------hhHHHHHHHhhcc
Confidence 35899999999999999999999977 999998811100 0000 0123456778889
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++ ...+.+++++++++|.+++|+|.+|..
T Consensus 202 gV~i~~~~~v~~~~--~~~v~~~~g~~~~~D~vl~a~G~~Pn~ 242 (437)
T 4eqs_A 202 EIPYRLNEEINAIN--GNEITFKSGKVEHYDMIIEGVGTHPNS 242 (437)
T ss_dssp TCCEEESCCEEEEE--TTEEEETTSCEEECSEEEECCCEEESC
T ss_pred ceEEEeccEEEEec--CCeeeecCCeEEeeeeEEEEeceecCc
Confidence 99999999998876 457889999999999999999988864
No 226
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.32 E-value=5.8e-06 Score=75.27 Aligned_cols=167 Identities=16% Similarity=0.138 Sum_probs=104.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCCCC-------------------------------------C
Q 013952 162 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPRL-------------------------------------F 202 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~~~~~~~-------------------------------------~ 202 (433)
...|+|||+|+.|+.+|..|++. |.+|+++++.+...... .
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 44899999999999999999998 99999999854332000 1
Q ss_pred CHHHHHHHHHHHHh-cCcEEEcCCeEEEEEecC--C-C--cEEEEEeC--------------CCcEEEC-----------
Q 013952 203 TADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNA--D-G--EVKEVKLK--------------DGRTLEA----------- 251 (433)
Q Consensus 203 ~~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~--~-g--~~~~v~~~--------------~g~~i~~----------- 251 (433)
..++...+.+.+.+ .||+++.++++.++..++ + + ++.+|.+. ++..+.|
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 23445566666666 499999999999998743 3 4 77777652 3357999
Q ss_pred ----CEEEEcccCccCh-hhhhccc---ccC---CCc----------EEeCCCCC-CCCCCeEEcCccccccccccCccc
Q 013952 252 ----DIVVVGVGGRPLI-SLFKGQV---AEN---KGG----------IETDDFFK-TSADDVYAVGDVATFPMKLYREMR 309 (433)
Q Consensus 252 ----d~vi~a~G~~p~~-~~~~~~~---~~~---~g~----------i~vd~~~~-t~~~~vfa~Gd~~~~~~~~~~~~~ 309 (433)
+.||.|+|..... .++...+ ... .|- .+|+..-. +-+|++|++|-.+..-. |.++
T Consensus 225 ~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~r 301 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELD---GLNR 301 (326)
T ss_dssp STTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHH---TCCB
T ss_pred cccCCEEEECcCCCchHHHHHHhhccccccccccCceeccccccchhheeecCCCccccCCEEECChHHHHhc---CCCC
Confidence 9999999966433 2332111 110 010 11111112 15899999998774321 1111
Q ss_pred ccccHHHHHHHHHHHHHHHhcc
Q 013952 310 RVEHVDHARKSAEQAVKTIMAT 331 (433)
Q Consensus 310 ~~~~~~~A~~~g~~aa~~i~~~ 331 (433)
--+....-...|+.||+.|+..
T Consensus 302 ~g~~fg~m~~sg~~~a~~~~~~ 323 (326)
T 2gjc_A 302 MGPTFGAMALSGVHAAEQILKH 323 (326)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHH
T ss_pred CChhhhhhhhhhHHHHHHHHHH
Confidence 1123333446788898888754
No 227
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.32 E-value=1.3e-06 Score=84.32 Aligned_cols=100 Identities=20% Similarity=0.355 Sum_probs=71.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCC------CC-----CCHHHHHHHHHHH-HhcCcEEEcCCeE
Q 013952 162 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMP------RL-----FTADIAAFYEGYY-ANKGIKIIKGTVA 227 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~~~~~------~~-----~~~~~~~~l~~~l-~~~GV~v~~~~~v 227 (433)
.++++|||+|+.|+.+|..|++. +.+|+++++.+.+.. .. ...++.....+.+ ++.||++++++++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v 82 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAEV 82 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCEEETTCEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCEE
Confidence 46899999999999999999998 789999998764311 00 0112222222333 6889999999999
Q ss_pred EEEEecCCCcEEEEEeCCC-cEEECCEEEEcccCccChh
Q 013952 228 VGFTTNADGEVKEVKLKDG-RTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 228 ~~i~~~~~g~~~~v~~~~g-~~i~~d~vi~a~G~~p~~~ 265 (433)
..++. +. ..+.+.++ .++.+|.+|+|||.+|...
T Consensus 83 ~~i~~--~~--~~v~~~~g~~~~~~d~lviAtG~~p~~p 117 (449)
T 3kd9_A 83 IEVDT--GY--VRVRENGGEKSYEWDYLVFANGASPQVP 117 (449)
T ss_dssp EEECS--SE--EEEECSSSEEEEECSEEEECCCEEECCC
T ss_pred EEEec--CC--CEEEECCceEEEEcCEEEECCCCCCCCC
Confidence 99864 33 45667777 4799999999999887643
No 228
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.31 E-value=7.1e-07 Score=90.13 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=31.8
Q ss_pred CcCeEEEECCCHHHHHHHHHHHH-cCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAK-QGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~~~~V~lie~~ 40 (433)
..+||+|||||++||++|..|++ .|.+ |+|||+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~---V~viEr~ 65 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIR---TCIVEQK 65 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSC---EEEECSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCC---EEEEeCC
Confidence 35799999999999999999999 8987 9999998
No 229
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.31 E-value=1.5e-06 Score=84.06 Aligned_cols=101 Identities=12% Similarity=0.232 Sum_probs=74.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccC--CC----CCC------HHHHHHHHHHHHhcCcEEEcCCeEE
Q 013952 163 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM--PR----LFT------ADIAAFYEGYYANKGIKIIKGTVAV 228 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~~~~--~~----~~~------~~~~~~l~~~l~~~GV~v~~~~~v~ 228 (433)
++++|||+|+.|+.+|..|++. |.+|+++++.+.+. +. ... .++.....+.+++.|++++.+++|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~ 82 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLLLNREVV 82 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEECSCEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEEECCEEE
Confidence 5899999999999999999998 89999999876532 11 001 1111124566788999999999999
Q ss_pred EEEecCCCcEEEEE-eCCCcEEECCEEEEcccCccChh
Q 013952 229 GFTTNADGEVKEVK-LKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 229 ~i~~~~~g~~~~v~-~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
+++. +.+...+. ..++.++.+|.+|+|||.+|...
T Consensus 83 ~id~--~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 83 AMDV--ENQLIAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp EEET--TTTEEEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred EEEC--CCCEEEEEecCceEEEEcCEEEECCCcccCCC
Confidence 9986 44444443 23456799999999999988653
No 230
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.30 E-value=1.2e-06 Score=86.96 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=31.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+||+|||||++|+++|..|++.|.+ |+|+|+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~---V~vlEr~ 58 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVG---HLVVEQT 58 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCC
Confidence 57999999999999999999999987 9999998
No 231
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.30 E-value=3.9e-06 Score=79.70 Aligned_cols=101 Identities=20% Similarity=0.333 Sum_probs=74.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC-----CCCHHHHH----------------------------
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-----LFTADIAA---------------------------- 208 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~-----~~~~~~~~---------------------------- 208 (433)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... .+.+...+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 468999999999999999999999999999987553111 01222111
Q ss_pred ---------------HHHHHHHh--cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 209 ---------------FYEGYYAN--KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 209 ---------------~l~~~l~~--~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
.+.+.|.+ .|++++++++|+++..++++ ..+++.+|+++.+|.||.|.|.....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 85 RVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSET--VQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSC--EEEEETTSCEEEESEEEECCCTTCHH
T ss_pred ccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCE--EEEEECCCCEEECCEEEECCCcchhH
Confidence 12222222 38999999999999874333 56888899899999999999987654
No 232
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.30 E-value=7.4e-07 Score=86.31 Aligned_cols=99 Identities=16% Similarity=0.229 Sum_probs=72.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++..... +.+. ......+.+.+++.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l------------------~~~~----~~~~~~l~~~l~~~ 224 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTK---VTILEGAGEIL------------------SGFE----KQMAAIIKKRLKKK 224 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSS------------------TTSC----HHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCCccc------------------cccC----HHHHHHHHHHHHHC
Confidence 46899999999999999999999876 99999871111 0000 00012345667889
Q ss_pred CcEEEeCceEEEEECCCCE--EEeC---CCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASKT--LLSA---TGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~--v~~~---~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++.++.. +.+. +++++++|.+++|+|.+|...
T Consensus 225 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 225 GVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp TCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred CCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 9999999999999865543 3433 446799999999999988653
No 233
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.28 E-value=6.2e-06 Score=81.82 Aligned_cols=99 Identities=15% Similarity=0.065 Sum_probs=77.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-cC-----------------------CC------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR------------------ 200 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~-~~-----------------------~~------------------ 200 (433)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~~ 108 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNA 108 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhhc
Confidence 3799999999999999999999999999987531 10 00
Q ss_pred -----------CCC-HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 201 -----------LFT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 201 -----------~~~-~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
..+ ..+.+.+.+.+++ .|++++ +..|..+.. +++++..|.+.+|..+.||.||+|+|..++
T Consensus 109 ~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 109 SKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred ccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 001 2355667777877 699995 678999976 466777899989988999999999997653
No 234
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.28 E-value=6.4e-06 Score=81.44 Aligned_cols=100 Identities=19% Similarity=0.136 Sum_probs=77.6
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-cC-----------------------CCC-----------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PRL----------------- 201 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~-~~-----------------------~~~----------------- 201 (433)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ...
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~~ 107 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNT 107 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEEST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeeccc
Confidence 4799999999999999999999999999987531 10 000
Q ss_pred ------------CC-HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 202 ------------FT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 202 ------------~~-~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
.+ ..+.+.+.+.+++ .||+++ +..|+++.. +++++..|.+.+|..+.||.||+|+|..++.
T Consensus 108 ~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~ 182 (637)
T 2zxi_A 108 RKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFLNG 182 (637)
T ss_dssp TSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCBTC
T ss_pred ccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCccC
Confidence 00 2345666777777 599995 678999876 4677778999999999999999999976543
No 235
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.28 E-value=3.2e-06 Score=76.99 Aligned_cols=33 Identities=33% Similarity=0.384 Sum_probs=30.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~ 40 (433)
.+||+|||||++|+++|..|++. |++ |+|+|+.
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~---V~v~e~~ 99 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLK---VCIIESS 99 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSC---EEEECSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCe---EEEEecC
Confidence 46999999999999999999998 776 9999998
No 236
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.27 E-value=3e-06 Score=77.47 Aligned_cols=101 Identities=15% Similarity=0.054 Sum_probs=74.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEE-EccCCc---c--------CCC----CCCHHHHHHHHHHHHhcCcEEEcCC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSM-VYPEPW---C--------MPR----LFTADIAAFYEGYYANKGIKIIKGT 225 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l-i~~~~~---~--------~~~----~~~~~~~~~l~~~l~~~GV~v~~~~ 225 (433)
..+|+|||+|+.|+.+|..|++.|.+|++ +++... + .+. ....++...+.+.+++.|++++.+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~- 82 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEMV- 82 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEECC-
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEEE-
Confidence 45899999999999999999999999999 886310 0 111 012578888899999999999998
Q ss_pred eEEEEEecCCCcEEEE-EeCCCcEEECCEEEEcccCccChh
Q 013952 226 VAVGFTTNADGEVKEV-KLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 226 ~v~~i~~~~~g~~~~v-~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
++.++ .+++.....+ ...++ ++.+|.+|+|+|.+|+..
T Consensus 83 ~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 83 GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECCC
T ss_pred EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCCC
Confidence 88888 5221122443 22334 899999999999877643
No 237
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.27 E-value=9.8e-06 Score=74.88 Aligned_cols=97 Identities=10% Similarity=0.055 Sum_probs=70.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC----------------CC---CCHHHHHHHHH-----------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP----------------RL---FTADIAAFYEG----------- 212 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~----------------~~---~~~~~~~~l~~----------- 212 (433)
..|+|||+|++|+.+|..|++.|.+|+++++.+.... .. ..+.+.+.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 4799999999999999999999999999998753210 00 12333222222
Q ss_pred --------------------------------HHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEE-CCEEEEccc
Q 013952 213 --------------------------------YYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLE-ADIVVVGVG 259 (433)
Q Consensus 213 --------------------------------~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~-~d~vi~a~G 259 (433)
.+. .|++++++++|++++.++++ ..|++.+|+.+. +|.||+|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~--~~v~~~~g~~~~~a~~vV~a~g 159 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEH--WNLLDAEGQNHGPFSHVIIATP 159 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSC--EEEEETTSCEEEEESEEEECSC
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCE--EEEEeCCCcCccccCEEEEcCC
Confidence 222 28999999999999884444 568888887664 999999999
Q ss_pred Ccc
Q 013952 260 GRP 262 (433)
Q Consensus 260 ~~p 262 (433)
...
T Consensus 160 ~~~ 162 (336)
T 1yvv_A 160 APQ 162 (336)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 238
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.25 E-value=2.5e-06 Score=85.41 Aligned_cols=103 Identities=17% Similarity=0.199 Sum_probs=76.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccC-----------CCCCC--HHHHHHHHHHHHhcCcEEEcCC
Q 013952 161 KNGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM-----------PRLFT--ADIAAFYEGYYANKGIKIIKGT 225 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~~~~-----------~~~~~--~~~~~~l~~~l~~~GV~v~~~~ 225 (433)
..++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. ....+ ..+...+....++.|+++++++
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~~~ 114 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLS 114 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEECSE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEECC
Confidence 457999999999999999999998 89999999887631 00001 1123345566678899999999
Q ss_pred eEEEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccCccChh
Q 013952 226 VAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 226 ~v~~i~~~~~g~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~~ 265 (433)
+|.+++. +++...+.. .+|+ .+.+|.+|+|||.+|...
T Consensus 115 ~V~~id~--~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~p 155 (588)
T 3ics_A 115 EVVKINK--EEKTITIKNVTTNETYNEAYDVLILSPGAKPIVP 155 (588)
T ss_dssp EEEEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEEEC--CCCEEEEeecCCCCEEEEeCCEEEECCCCCCCCC
Confidence 9999986 444444443 4565 789999999999877643
No 239
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=2.2e-06 Score=84.02 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=74.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-.|..|++.|.+ |+++++...... .+. . .....+.+.+++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~--~~d---------~-----------~~~~~l~~~l~~~ 230 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGID---SYIFARGNRILR--KFD---------E-----------SVINVLENDMKKN 230 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCE---EEEECSSSSSCT--TSC---------H-----------HHHHHHHHHHHHT
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCe---EEEEecCCccCc--ccc---------h-----------hhHHHHHHHHHhC
Confidence 35899999999999999999998876 999998711110 000 0 0012346677889
Q ss_pred CcEEEeCceEEEEECCC---CEEEeCCCcE-EecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIAS---KTLLSATGLI-FKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~---~~v~~~~~~~-~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++.++ ..+.+.+|++ +.+|.+++|+|.+|..
T Consensus 231 gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 231 NINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp TCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred CCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 99999999999998643 2577778887 9999999999998875
No 240
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.24 E-value=5.7e-06 Score=78.43 Aligned_cols=101 Identities=16% Similarity=0.153 Sum_probs=76.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc------CCCC-----------------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC------MPRL----------------------------------- 201 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~------~~~~----------------------------------- 201 (433)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.. ....
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 37999999999999999999999999999976531 0000
Q ss_pred ------------------CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccC
Q 013952 202 ------------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGG 260 (433)
Q Consensus 202 ------------------~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~-~~g~--~i~~d~vi~a~G~ 260 (433)
....+.+.+.+.+.+.|++++++++|+++..++++. ..|++ .+|+ ++.+|.||.|.|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~-~~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGER-PYVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSS-CEEEEEETTEEEEEECSEEEECCCT
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCc-eEEEEecCCcEEEEEeCEEEECCCC
Confidence 013455567777777899999999999998632222 35666 6776 7999999999998
Q ss_pred ccCh
Q 013952 261 RPLI 264 (433)
Q Consensus 261 ~p~~ 264 (433)
....
T Consensus 162 ~S~v 165 (394)
T 1k0i_A 162 HGIS 165 (394)
T ss_dssp TCST
T ss_pred CcHH
Confidence 7654
No 241
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.24 E-value=8.5e-07 Score=83.17 Aligned_cols=37 Identities=27% Similarity=0.448 Sum_probs=34.6
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
||+.++||+|||||++|+++|++|+++|.+ |+|+|+.
T Consensus 2 ~m~~~~dVvVIG~Gi~Gls~A~~La~~G~~---V~vle~~ 38 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIGLSSALILARKGYS---VHILARD 38 (363)
T ss_dssp CCCCSCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHhCCCE---EEEEecc
Confidence 777789999999999999999999999987 9999998
No 242
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.24 E-value=1.6e-06 Score=84.45 Aligned_cols=98 Identities=15% Similarity=0.170 Sum_probs=74.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-.|..|++.|.+ |+++++...... .+. . .....+.+.+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~--~~d---------~-----------~~~~~l~~~l~~~ 239 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSE---THLVIRGETVLR--KFD---------E-----------CIQNTITDHYVKE 239 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCE---EEEECSSSSSCT--TSC---------H-----------HHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---eEEEEeCCcccc--ccC---------H-----------HHHHHHHHHHHhC
Confidence 36899999999999999999999876 999998811110 000 0 0012345667788
Q ss_pred CcEEEeCceEEEEECCC----CEEEeCCC-cEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIAS----KTLLSATG-LIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~----~~v~~~~~-~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..+..++ ..+.+.+| +++.+|.+|+|+|.+|..
T Consensus 240 Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 240 GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 99999999999997642 25777888 789999999999988865
No 243
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.23 E-value=1e-05 Score=80.11 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=76.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC--------CC------------CCC----------------HHH
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------PR------------LFT----------------ADI 206 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~--------~~------------~~~----------------~~~ 206 (433)
.+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. .+. +++
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~i 96 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPEI 96 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHHH
Confidence 379999999999999999999999999998764320 00 011 345
Q ss_pred HHHHHHHHHhcC--cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 207 AAFYEGYYANKG--IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 207 ~~~l~~~l~~~G--V~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
.+.+....++.+ +.++++++|.++..++++....|++.+|+++.+|.||+|+|.
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 566666666665 679999999999875554556788889989999999999994
No 244
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.22 E-value=2.1e-06 Score=83.95 Aligned_cols=98 Identities=14% Similarity=0.222 Sum_probs=74.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHH
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 81 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~---g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (433)
..+++|||||+.|+-.|..|++. |.+ |+++++...... .+. . .....+.+.+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~~l~--~~d---------~-----------~~~~~l~~~l 245 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGK---VTLCYRNNLILR--GFD---------E-----------TIREEVTKQL 245 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCE---EEEEESSSSSCT--TSC---------H-----------HHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEEcCCcccc--ccC---------H-----------HHHHHHHHHH
Confidence 36899999999999999999998 876 999998821110 000 0 0012346677
Q ss_pred HhCCcEEEeCceEEEEECCC---CEEEeCCCcEEecceEEEccCCCccc
Q 013952 82 KEKGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 82 ~~~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
++.|++++.++.+..++.++ ..|.+.+|+++++|.+|+|+|.+|..
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred HhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 88999999999999998653 25777888899999999999998865
No 245
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.21 E-value=2.3e-06 Score=83.63 Aligned_cols=98 Identities=15% Similarity=0.210 Sum_probs=74.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc---CCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHH
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ---GVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY 81 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~---g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (433)
..+++|||||+.|+-+|..|++. |.+ |+++++...... .+ . ......+.+.+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~~l~--~~----------------d----~~~~~~l~~~l 241 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQ---VDLAYRGDMILR--GF----------------D----SELRKQLTEQL 241 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCE---EEEEESSSSSST--TS----------------C----HHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCe---EEEEEcCCCccc--cc----------------C----HHHHHHHHHHH
Confidence 36899999999999999999998 776 999998821110 00 0 00013355677
Q ss_pred HhCCcEEEeCceEEEEECCC---CEEEeCCCcEEecceEEEccCCCccc
Q 013952 82 KEKGIELILSTEIVRADIAS---KTLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 82 ~~~~v~~~~~~~v~~i~~~~---~~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
++.|++++.++.+..+..++ ..|.+.+|+++.+|.+|+|+|.+|..
T Consensus 242 ~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 242 RANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp HHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred HhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 88999999999999998653 25777888889999999999998865
No 246
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.21 E-value=1.7e-06 Score=84.34 Aligned_cols=99 Identities=15% Similarity=0.301 Sum_probs=73.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++...... .+. . .....+.+.+++.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~--~~~---------~-----------~~~~~l~~~l~~~ 237 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSK---VTVVEFQPQIGA--SMD---------G-----------EVAKATQKFLKKQ 237 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSS--SSC---------H-----------HHHHHHHHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCE---EEEEEeCCcccc--ccC---------H-----------HHHHHHHHHHHHC
Confidence 36899999999999999999999876 999998821110 000 0 0013345677889
Q ss_pred CcEEEeCceEEEEEC--CCC--EEEeC-----CCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADI--ASK--TLLSA-----TGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~--~~~--~v~~~-----~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++. +++ .+.+. +++++.+|.+|+|+|.+|...
T Consensus 238 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 238 GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 999999999999986 444 34444 346799999999999988654
No 247
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.20 E-value=3.8e-06 Score=81.68 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=64.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccC------CCCCC------HHH-------HHHHHHHHHhcCcE
Q 013952 162 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCM------PRLFT------ADI-------AAFYEGYYANKGIK 220 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~~~~------~~~~~------~~~-------~~~l~~~l~~~GV~ 220 (433)
.++|+|||+|+.|+.+|..|++. |.+|+++++.+.+. +.... .++ ........++.|++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 36899999999999999999998 89999999887631 11111 111 22223333458999
Q ss_pred EEcCCeEEEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccCccChh
Q 013952 221 IIKGTVAVGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 221 v~~~~~v~~i~~~~~g~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~~ 265 (433)
++.+++|.+++. +++...+.. .+|+ .+.+|.+|+|+|.+|...
T Consensus 83 ~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 128 (472)
T 3iwa_A 83 ALVETRAHAIDR--AAHTVEIENLRTGERRTLKYDKLVLALGSKANRP 128 (472)
T ss_dssp EECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEECCEEEEEEC--CCCEEEEeecCCCCEEEEECCEEEEeCCCCcCCC
Confidence 999999999986 444444443 3354 799999999999877643
No 248
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.20 E-value=3e-06 Score=82.27 Aligned_cols=102 Identities=17% Similarity=0.188 Sum_probs=76.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCC-----CeEEEEccCCccC-------CC-------------------------------
Q 013952 164 KAVVVGGGYIGLELSAALKINN-----IDVSMVYPEPWCM-------PR------------------------------- 200 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g-----~~V~li~~~~~~~-------~~------------------------------- 200 (433)
.|+|||+|+.|+.+|..|++.| .+|+++++.+.+. +.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~~~ 111 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHKHD 111 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHHTT
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhhcC
Confidence 7999999999999999999999 8999998776321 00
Q ss_pred ----------C--CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC-CcE--EEEEeCCCc----EEECCEEEEcccCc
Q 013952 201 ----------L--FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD-GEV--KEVKLKDGR----TLEADIVVVGVGGR 261 (433)
Q Consensus 201 ----------~--~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~-g~~--~~v~~~~g~----~i~~d~vi~a~G~~ 261 (433)
. ...++.+.+....++.+++++++++|.+++..++ +.. ..|.+.+|+ ++.+|.||+|+|..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 112 RLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGT 191 (463)
T ss_dssp CHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCE
T ss_pred ceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCC
Confidence 0 0134455666666777999999999999987321 333 256666665 89999999999987
Q ss_pred cChh
Q 013952 262 PLIS 265 (433)
Q Consensus 262 p~~~ 265 (433)
|...
T Consensus 192 p~~p 195 (463)
T 3s5w_A 192 PRIP 195 (463)
T ss_dssp ECCC
T ss_pred CCCc
Confidence 7643
No 249
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.20 E-value=1.3e-05 Score=79.70 Aligned_cols=101 Identities=18% Similarity=0.234 Sum_probs=79.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC------------------------------------------
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------------------------------------------ 199 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~------------------------------------------ 199 (433)
...|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 46899999999999999999999999999987621000
Q ss_pred ---------------------CCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC-CC--cEEECCEEE
Q 013952 200 ---------------------RLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK-DG--RTLEADIVV 255 (433)
Q Consensus 200 ---------------------~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~-~g--~~i~~d~vi 255 (433)
......+.+.+.+.+++.||+++++++|+++..+ ++....|.+. +| .++.+|.||
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEE
Confidence 0001356677788888899999999999999863 4556778776 66 579999999
Q ss_pred EcccCccC
Q 013952 256 VGVGGRPL 263 (433)
Q Consensus 256 ~a~G~~p~ 263 (433)
.|+|....
T Consensus 182 ~AdG~~S~ 189 (591)
T 3i3l_A 182 DAGGSGGP 189 (591)
T ss_dssp ECCGGGCH
T ss_pred ECCCCcch
Confidence 99998653
No 250
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.20 E-value=8.6e-06 Score=78.72 Aligned_cols=101 Identities=22% Similarity=0.261 Sum_probs=78.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC----C--------------------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP----R-------------------------------------- 200 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~----~-------------------------------------- 200 (433)
..|+|||+|+.|+.+|..|++.|.+|+++++.+.... .
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQT 86 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCce
Confidence 4799999999999999999999999999987653210 0
Q ss_pred ----------CCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC---CCc--EEECCEEEEcccCccCh
Q 013952 201 ----------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK---DGR--TLEADIVVVGVGGRPLI 264 (433)
Q Consensus 201 ----------~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~---~g~--~i~~d~vi~a~G~~p~~ 264 (433)
.....+.+.+.+.+++.|++++++++|+++.. +++.+..|.+. +|+ ++.+|.||.|+|..+..
T Consensus 87 ~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 87 VWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp EEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred EEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 00124667777788889999999999999987 35555545553 665 79999999999976654
No 251
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.19 E-value=2.4e-06 Score=84.16 Aligned_cols=97 Identities=14% Similarity=0.204 Sum_probs=73.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEKG 85 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (433)
.+++|||||..|+.+|..|++.|.+ |+++++....... +. . .....+.+.+++.|
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~---Vtlv~~~~~~l~~--~~---------~-----------~~~~~l~~~l~~~G 269 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRR---TVMLVRTEPLKLI--KD---------N-----------ETRAYVLDRMKEQG 269 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCTTTTC--CS---------H-----------HHHHHHHHHHHHTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCe---EEEEEecCccccc--cc---------H-----------HHHHHHHHHHHhCC
Confidence 6899999999999999999999876 9999988211100 00 0 00123466778899
Q ss_pred cEEEeCceEEEEECC--C----CEEEeCCCc-EEecceEEEccCCCccc
Q 013952 86 IELILSTEIVRADIA--S----KTLLSATGL-IFKYQILVIATGSTVLR 127 (433)
Q Consensus 86 v~~~~~~~v~~i~~~--~----~~v~~~~~~-~~~~d~lvlAtG~~~~~ 127 (433)
++++.++.|..+..+ . ..|.+.+|+ ++.+|.+|+|+|.+|..
T Consensus 270 V~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 270 MEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp CEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred cEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 999999999999863 3 236677776 89999999999998865
No 252
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.19 E-value=2.7e-06 Score=83.16 Aligned_cols=99 Identities=15% Similarity=0.239 Sum_probs=73.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++......+ . +. ......+.+.+++.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~~------~--------~~-------~~~~~~l~~~l~~~ 249 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKE---VVLIDVVDTCLAG------Y--------YD-------RDLTDLMAKNMEEH 249 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSTTTT------T--------SC-------HHHHHHHHHHHHTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCe---EEEEEcccchhhh------H--------HH-------HHHHHHHHHHHHhC
Confidence 46899999999999999999999876 9999988211100 0 00 00012345667789
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++.+++ .+.+ +++++++|.+|+|+|.+|...
T Consensus 250 GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 250 GIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp TCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred CeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChH
Confidence 999999999999986443 3555 667899999999999888643
No 253
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.19 E-value=1.5e-06 Score=84.87 Aligned_cols=98 Identities=13% Similarity=0.170 Sum_probs=73.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-+|..|++.|.+ |+++++...... .+. ......+.+.+++.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~---Vtlv~~~~~~l~------------------~~~----~~~~~~l~~~l~~~ 239 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSR---LDVVEMMDGLMQ------------------GAD----RDLVKVWQKQNEYR 239 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCE---EEEECSSSSSST------------------TSC----HHHHHHHHHHHGGG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECCcccc------------------ccC----HHHHHHHHHHHHhc
Confidence 46899999999999999999999876 999998811110 000 00012345667788
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCC----CcEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSAT----GLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~----~~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++.+++ .+.+.+ ++++.+|.+++|+|.+|..
T Consensus 240 gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 240 FDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp EEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred CCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 999999999999976543 456655 6779999999999998865
No 254
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.18 E-value=1.1e-05 Score=73.83 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=73.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc---cC--------CC---CCCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW---CM--------PR---LFTADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~---~~--------~~---~~~~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
.|+|||+|+.|+.+|..+++.|.+|+++++... .+ +. ...+++.........+.++.+..+..+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSV 87 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccceeeeee
Confidence 589999999999999999999999999986421 00 11 12357777777888888888888877666
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCccChh
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
... .. ..+...+++++.+|.+|+|||.+|...
T Consensus 88 ~~~--~~--~~~~~~~~~~~~~d~liiAtGs~~~~~ 119 (312)
T 4gcm_A 88 EDK--GE--YKVINFGNKELTAKAVIIATGAEYKKI 119 (312)
T ss_dssp EEC--SS--CEEEECSSCEEEEEEEEECCCEEECCC
T ss_pred eee--ec--ceeeccCCeEEEeceeEEcccCccCcC
Confidence 554 22 234556778999999999999887643
No 255
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.18 E-value=2.4e-06 Score=83.22 Aligned_cols=100 Identities=13% Similarity=0.173 Sum_probs=72.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++......+ .++ ......+.+.+++.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~--------------~~~-------~~~~~~l~~~l~~~ 233 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGAD---VTAVEFLGHVGGV--------------GID-------MEISKNFQRILQKQ 233 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSSCS--------------SCC-------HHHHHHHHHHHHHT
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCE---EEEEeccCccCCc--------------ccC-------HHHHHHHHHHHHHC
Confidence 36899999999999999999999876 9999988211100 000 00012345677889
Q ss_pred CcEEEeCceEEEEECCCC---EEEe-----CCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASK---TLLS-----ATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~---~v~~-----~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..++.++. .+.+ .+++++++|.+|+|+|.+|...
T Consensus 234 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 234 GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 999999999999986553 2332 3556899999999999988653
No 256
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.17 E-value=2.5e-06 Score=82.81 Aligned_cols=98 Identities=15% Similarity=0.175 Sum_probs=72.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-+|..|++.|.+ |+++++..... +.+. ......+.+.+++.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l------------------~~~~----~~~~~~l~~~l~~~ 225 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVD---VTIVEFLPRAL------------------PNED----ADVSKEIEKQFKKL 225 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSS------------------TTSC----HHHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCe---EEEEEcCCccc------------------cccC----HHHHHHHHHHHHHc
Confidence 36899999999999999999999876 99999881111 0000 00012345667788
Q ss_pred CcEEEeCceEEEEECCCC--EEEeC-CC--cEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSA-TG--LIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~-~~--~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++.++. .+.+. ++ +++.+|.+++|+|.+|..
T Consensus 226 gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 226 GVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp TCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECC
T ss_pred CCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccC
Confidence 999999999999986553 34443 55 579999999999988864
No 257
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.16 E-value=3.6e-06 Score=82.44 Aligned_cols=98 Identities=14% Similarity=0.236 Sum_probs=74.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+..|..+++.|.+ |+++++....... +. . .....+.+.+++.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~~--~d---------~-----------~~~~~l~~~l~~~ 236 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVP---VTVVASQDHVLPY--ED---------A-----------DAALVLEESFAER 236 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCC---EEEECSSSSSSCC--SS---------H-----------HHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcCCccccc--cC---------H-----------HHHHHHHHHHHHC
Confidence 36899999999999999999999876 9999988111100 00 0 0013456677889
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.|..+..++. .+.+.+++++.+|.+|+|+|.+|..
T Consensus 237 GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 237 GVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp TCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 999999999999987653 3556677889999999999998865
No 258
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.15 E-value=2.7e-05 Score=77.64 Aligned_cols=102 Identities=22% Similarity=0.335 Sum_probs=80.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhC------CCeEEEEccCCccCCC------------------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKIN------NIDVSMVYPEPWCMPR------------------------------------ 200 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~------g~~V~li~~~~~~~~~------------------------------------ 200 (433)
-.|+|||+|+.|+-+|..|++. |.+|+++++.+.+...
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 4799999999999999999998 9999999875322100
Q ss_pred --------CC---C--------------HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC------C---
Q 013952 201 --------LF---T--------------ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD------G--- 246 (433)
Q Consensus 201 --------~~---~--------------~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~------g--- 246 (433)
.+ + ..+.+.+.+.+++.||++++++.+.++..++++.+..|.+.+ |
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~ 195 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPK 195 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEE
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcc
Confidence 00 1 155677888888899999999999999875557777787753 3
Q ss_pred ------cEEECCEEEEcccCccCh
Q 013952 247 ------RTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 247 ------~~i~~d~vi~a~G~~p~~ 264 (433)
.++.+|.||.|.|.+...
T Consensus 196 ~~~~~g~~i~Ad~VV~AdG~~S~v 219 (584)
T 2gmh_A 196 TTFERGLELHAKVTIFAEGCHGHL 219 (584)
T ss_dssp EEEECCCEEECSEEEECCCTTCHH
T ss_pred cccCCceEEECCEEEEeeCCCchH
Confidence 589999999999987653
No 259
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.14 E-value=5.7e-06 Score=81.28 Aligned_cols=97 Identities=11% Similarity=0.030 Sum_probs=74.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
..+++|||||+.|+-.|..+++.|.+ |+|+++. ..+. +.. +....+...+++
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~---VTii~~~~~L~~--------------------~D~----ei~~~l~~~l~~ 275 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYD---VTVAVRSIVLRG--------------------FDQ----QCAVKVKLYMEE 275 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCC---EEEEESSCSSTT--------------------SCH----HHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCe---EEEecccccccc--------------------cch----hHHHHHHHHHHh
Confidence 46899999999999999999999987 9999776 2111 000 001345677888
Q ss_pred CCcEEEeCceEEEEECCCCE--EEeCCCcEEecceEEEccCCCcccc
Q 013952 84 KGIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
.+++++.+..+..+...+.. +.+.++.++.+|.+++|+|-+|+..
T Consensus 276 ~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 276 QGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp TTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred hcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 99999999999888766654 5567788899999999999988753
No 260
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.14 E-value=3.6e-06 Score=81.42 Aligned_cols=100 Identities=15% Similarity=0.237 Sum_probs=72.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+..|..|++.|.+ |+++++......+ .+. ......+.+.+++.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~~--------------~~~-------~~~~~~l~~~l~~~ 204 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYN---VNLIDGHERVLYK--------------YFD-------KEFTDILAKDYEAH 204 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSSTTTT--------------TSC-------HHHHHHHHHHHHHT
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCE---EEEEEcCCchhhh--------------hhh-------hhHHHHHHHHHHHC
Confidence 46899999999999999999998876 9999988211100 000 00012345677889
Q ss_pred CcEEEeCceEEEEECCCCEE--EeCCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASKTL--LSATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v--~~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+.+++.++..+ ...+++++.+|.+|+|+|.+|...
T Consensus 205 Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 205 GVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp TCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCG
T ss_pred CCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHH
Confidence 99999999999998633322 234678899999999999988643
No 261
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.13 E-value=2.2e-05 Score=74.65 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=73.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCC------CCHHHH-----------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL------FTADIA----------------------------- 207 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~------~~~~~~----------------------------- 207 (433)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.... +.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 379999999999999999999999999998765432110 111100
Q ss_pred ------------------------------HHHHHHHH-hcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEE
Q 013952 208 ------------------------------AFYEGYYA-NKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVV 256 (433)
Q Consensus 208 ------------------------------~~l~~~l~-~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~ 256 (433)
..+.+.|. ..+..+++++++++++..+++. ..+++.||+++++|+||-
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~-v~v~~~dG~~~~adlvVg 160 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGG-IKIFFADGSHENVDVLVG 160 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCe-EEEEECCCCEEEeeEEEE
Confidence 11223332 2355788999999998755554 478999999999999999
Q ss_pred cccCccCh
Q 013952 257 GVGGRPLI 264 (433)
Q Consensus 257 a~G~~p~~ 264 (433)
|-|.+...
T Consensus 161 ADG~~S~v 168 (412)
T 4hb9_A 161 ADGSNSKV 168 (412)
T ss_dssp CCCTTCHH
T ss_pred CCCCCcch
Confidence 99976544
No 262
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.13 E-value=3.5e-06 Score=81.84 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=71.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHH-Hh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWY-KE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 83 (433)
..+++|||||+.|+-+|..|++.|.+ |+++++...... .+ . ......+.+.+ ++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~--~~----------------d----~~~~~~l~~~l~~~ 228 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAE---VTVVEFAPRCAP--TL----------------D----EDVTNALVGALAKN 228 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSST--TS----------------C----HHHHHHHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCE---EEEEecCCcccc--cC----------------C----HHHHHHHHHHHhhc
Confidence 36899999999999999999999876 999998811110 00 0 00013345667 88
Q ss_pred CCcEEEeCceEEEEECCCC--EEEeC--CC--cEEecceEEEccCCCccc
Q 013952 84 KGIELILSTEIVRADIASK--TLLSA--TG--LIFKYQILVIATGSTVLR 127 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~--~v~~~--~~--~~~~~d~lvlAtG~~~~~ 127 (433)
.|++++.++.+..++.++. .+.+. ++ +++.+|.+|+|+|.+|..
T Consensus 229 ~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 229 EKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp TCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECC
T ss_pred CCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 9999999999999986553 34444 55 579999999999988864
No 263
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.12 E-value=4.3e-06 Score=83.35 Aligned_cols=101 Identities=15% Similarity=0.185 Sum_probs=72.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCCC----------C-CC-H-HHHHHHHHHHHhcCcEEEcCCeE
Q 013952 163 GKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPR----------L-FT-A-DIAAFYEGYYANKGIKIIKGTVA 227 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~~~~~~----------~-~~-~-~~~~~l~~~l~~~GV~v~~~~~v 227 (433)
++|+|||+|+.|+.+|..|++. +.+|+++++.+.+.-. . .+ . .+.+......++.|++++++++|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~V 81 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKHEV 81 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECCEE
Confidence 5799999999999999999988 7899999987653210 0 00 0 11122334445689999999999
Q ss_pred EEEEecCCCcEEEEEe-CCCc--EEECCEEEEcccCccChh
Q 013952 228 VGFTTNADGEVKEVKL-KDGR--TLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 228 ~~i~~~~~g~~~~v~~-~~g~--~i~~d~vi~a~G~~p~~~ 265 (433)
.+++. +++...+.. .+|+ ++.+|.+|+|||.+|...
T Consensus 82 ~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 82 VAIDR--AAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp EEEET--TTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred EEEEC--CCCEEEEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 99986 444444443 3343 799999999999877653
No 264
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.12 E-value=4.3e-06 Score=81.45 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=71.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++...... . +. ......+.+.+++.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~--~-------------~~-------~~~~~~l~~~l~~~ 240 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKK---VRMIERNDHIGT--I-------------YD-------GDMAEYIYKEADKH 240 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCE---EEEECCGGGTTS--S-------------SC-------HHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCe---EEEEEeCCchhh--c-------------CC-------HHHHHHHHHHHHHc
Confidence 47899999999999999999999876 999998711100 0 00 00012345667889
Q ss_pred CcEEEeCceEEEEECCCCE--EEeCCCcEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++.+++. +.+ ++.++++|.+|+|+|..|..
T Consensus 241 Gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~D~vi~a~G~~p~~ 284 (480)
T 3cgb_A 241 HIEILTNENVKAFKGNERVEAVET-DKGTYKADLVLVSVGVKPNT 284 (480)
T ss_dssp TCEEECSCCEEEEEESSBEEEEEE-TTEEEECSEEEECSCEEESC
T ss_pred CcEEEcCCEEEEEEcCCcEEEEEE-CCCEEEcCEEEECcCCCcCh
Confidence 9999999999999876543 444 44589999999999988764
No 265
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.11 E-value=2.2e-05 Score=77.93 Aligned_cols=99 Identities=15% Similarity=0.297 Sum_probs=75.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc-cC-----------------------CC------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW-CM-----------------------PR------------------ 200 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~-~~-----------------------~~------------------ 200 (433)
-.|+|||+|..|+++|..+++.|.+|.++++.+. +. ..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~~ 101 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLNR 101 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhccc
Confidence 4799999999999999999999999999987531 10 00
Q ss_pred -----------CCC-HHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 201 -----------LFT-ADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 201 -----------~~~-~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
..+ ..+...+.+.+++ .||+++. ..|..+.. +++.+.+|.+.+|..+.||.||+|+|..++
T Consensus 102 ~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 102 SKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp SSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred ccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 001 1455666777777 4999965 48888876 456677788889989999999999997654
No 266
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.11 E-value=2.5e-06 Score=82.93 Aligned_cols=98 Identities=16% Similarity=0.307 Sum_probs=72.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++...... ... . .....+.+.+++.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~---Vtli~~~~~~l~--~~~---------~-----------~~~~~l~~~l~~~ 231 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSE---VTVVEFASEIVP--TMD---------A-----------EIRKQFQRSLEKQ 231 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCE---EEEECSSSSSST--TSC---------H-----------HHHHHHHHHHHHS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEEcCCcccc--ccc---------H-----------HHHHHHHHHHHHc
Confidence 46899999999999999999999876 999998811110 000 0 0012345677889
Q ss_pred CcEEEeCceEEEEECCCC--EEEeC---CC--cEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSA---TG--LIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~---~~--~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++.++. .+.+. ++ +++.+|.+++|+|.+|..
T Consensus 232 gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 232 GMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp SCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 999999999999987653 34443 44 679999999999998864
No 267
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.10 E-value=2.5e-05 Score=76.75 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=76.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC--------C--------------------------------C--
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM--------P--------------------------------R-- 200 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~--------~--------------------------------~-- 200 (433)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... + .
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~ 87 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKEP 87 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCCc
Confidence 479999999999999999999999999998764100 0 0
Q ss_pred --------------------CCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE--eCCCc--EEECCEEEE
Q 013952 201 --------------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK--LKDGR--TLEADIVVV 256 (433)
Q Consensus 201 --------------------~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~--~~~g~--~i~~d~vi~ 256 (433)
.....+.+.+.+.+++.||+++++++|+++.. +++.+..|. ..+|+ ++.+|.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~ 166 (512)
T 3e1t_A 88 EPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVD 166 (512)
T ss_dssp SCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred cccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEE
Confidence 00124566777788889999999999999987 455554444 45574 799999999
Q ss_pred cccCccC
Q 013952 257 GVGGRPL 263 (433)
Q Consensus 257 a~G~~p~ 263 (433)
|+|....
T Consensus 167 AdG~~S~ 173 (512)
T 3e1t_A 167 ASGNRTR 173 (512)
T ss_dssp CCCTTCS
T ss_pred CCCcchH
Confidence 9997654
No 268
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.10 E-value=5.1e-06 Score=81.06 Aligned_cols=99 Identities=21% Similarity=0.269 Sum_probs=74.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||+|+.|+..|..+++.|.+ |+++++...... .+.. .....+.+.+++.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtli~~~~~~l~------------------~~~~----~~~~~l~~~l~~~ 245 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVK---TTLLHRGDLILR------------------NFDY----DLRQLLNDAMVAK 245 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSST------------------TSCH----HHHHHHHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCe---EEEEECCCcccc------------------ccCH----HHHHHHHHHHHHC
Confidence 46899999999999999999998876 999988711110 0000 0012345667788
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.|..+..++. .+.+.+++++.+|.+|+|+|..|...
T Consensus 246 Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 246 GISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp TCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred CCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 999999999999987544 56778888999999999999887643
No 269
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.08 E-value=1.6e-05 Score=73.78 Aligned_cols=94 Identities=15% Similarity=0.193 Sum_probs=68.6
Q ss_pred cEEEECCCHHHHHHHHHHHh---CCCeEEEEccCCccCC-------------------CCC---CH---HH---------
Q 013952 164 KAVVVGGGYIGLELSAALKI---NNIDVSMVYPEPWCMP-------------------RLF---TA---DI--------- 206 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~---~g~~V~li~~~~~~~~-------------------~~~---~~---~~--------- 206 (433)
+|+|||+|..|+-+|..|++ .|.+|+++++.+.... .++ +. .+
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLA 82 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHH
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHh
Confidence 69999999999999999999 8999999987632110 000 00 11
Q ss_pred -----------------------------HHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEc
Q 013952 207 -----------------------------AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVG 257 (433)
Q Consensus 207 -----------------------------~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a 257 (433)
...+....++.|++++++++|+++..++++ ..|.+.+|+.+.+|.||+|
T Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~--~~v~~~~g~~~~ad~vV~A 160 (342)
T 3qj4_A 83 YGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK--WEVSKQTGSPEQFDLIVLT 160 (342)
T ss_dssp TTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS--EEEEESSSCCEEESEEEEC
T ss_pred CCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE--EEEEECCCCEEEcCEEEEC
Confidence 111222334448999999999999884333 5688888877899999999
Q ss_pred cc
Q 013952 258 VG 259 (433)
Q Consensus 258 ~G 259 (433)
++
T Consensus 161 ~p 162 (342)
T 3qj4_A 161 MP 162 (342)
T ss_dssp SC
T ss_pred CC
Confidence 98
No 270
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.07 E-value=3e-06 Score=81.73 Aligned_cols=90 Identities=16% Similarity=0.146 Sum_probs=70.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc-------CCCC-CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEe
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC-------MPRL-FTADIAAFYEGYYANKGIKIIKGTVAVGFTT 232 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~-------~~~~-~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~ 232 (433)
..++|+|||+|+.|+.+|..|++.|.+|+++++.+.+ .+.+ ++.++.+...+.+++.||++++++.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~~--- 197 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADAGVIYHPNFEVGR--- 197 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHTTCEEETTCCBTT---
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCcEEEeCCEecc---
Confidence 3578999999999999999999999999999987654 2221 4677888888899999999999987521
Q ss_pred cCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 233 NADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 233 ~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
.+.+.++ .+.+|.||+|+|..
T Consensus 198 -------~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 198 -------DASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp -------TBCHHHH-HSSCSEEEECCCCC
T ss_pred -------EEEhhHh-HhhCCEEEEecCCC
Confidence 1222222 35699999999985
No 271
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.06 E-value=1.9e-05 Score=75.19 Aligned_cols=101 Identities=24% Similarity=0.317 Sum_probs=76.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC----------------------------------------
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------------------- 200 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~---------------------------------------- 200 (433)
+..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+...
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3568999999999999999999999999999986532100
Q ss_pred -C----C-----------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcc
Q 013952 201 -L----F-----------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGV 258 (433)
Q Consensus 201 -~----~-----------------~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~ 258 (433)
. + ...+.+.+.+.+++ ++++++++|++++.+++ ...+++.+|+++.+|.||.|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~--~v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD--GVTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT--EEEEEETTSCEEEESEEEECC
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC--cEEEEEcCCCEEeeCEEEECC
Confidence 0 0 01334455555554 89999999999987333 356888999999999999999
Q ss_pred cCccChh
Q 013952 259 GGRPLIS 265 (433)
Q Consensus 259 G~~p~~~ 265 (433)
|......
T Consensus 178 G~~S~vr 184 (407)
T 3rp8_A 178 GSHSALR 184 (407)
T ss_dssp CTTCSSH
T ss_pred CcChHHH
Confidence 9776553
No 272
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.06 E-value=1.1e-05 Score=81.36 Aligned_cols=33 Identities=39% Similarity=0.558 Sum_probs=30.6
Q ss_pred cCeEEEECCCHHHHHHHHHHH---H-cCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFA---K-QGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~---~-~g~~~~~V~lie~~ 40 (433)
.+||||||||+||++||.+|+ + .|.+ |+||||.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~---V~vlEK~ 58 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLK---VTLVEKA 58 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCC---EEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCe---EEEEeCc
Confidence 479999999999999999999 5 7887 9999998
No 273
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.04 E-value=6.8e-06 Score=80.27 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=70.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+.+|..|++.|.+ |+++++...... ... . .....+.+.+++.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~~l~--~~d---------~-----------~~~~~l~~~l~~~ 228 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVI---VKVFGRSGSVAN--LQD---------E-----------EMKRYAEKTFNEE 228 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCE---EEEECCTTCCTT--CCC---------H-----------HHHHHHHHHHHTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEECCcccc--cCC---------H-----------HHHHHHHHHHhhC
Confidence 36899999999999999999999876 999998811110 000 0 0012334555556
Q ss_pred CcEEEeCceEEEEECCCCE--EEeC--CC--cEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASKT--LLSA--TG--LIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~--v~~~--~~--~~~~~d~lvlAtG~~~~~~ 128 (433)
++++.++.+..+..++.. +.+. +| .++.+|.+++|+|..|...
T Consensus 229 -V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~ 277 (492)
T 3ic9_A 229 -FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVD 277 (492)
T ss_dssp -SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCS
T ss_pred -cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCC
Confidence 999999999998765543 4443 56 6799999999999988654
No 274
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.04 E-value=2.6e-05 Score=73.09 Aligned_cols=55 Identities=15% Similarity=0.163 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 205 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 205 ~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
.+.+.+.+.+++.|++++.+++|+++..++++ ..+.+.+| ++.+|.||+|+|...
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDG--VTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSS--EEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCE--EEEEECCC-eEEcCEEEEcCCccH
Confidence 34556667778889999999999999873333 46777777 599999999999643
No 275
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.04 E-value=2.7e-05 Score=73.85 Aligned_cols=102 Identities=20% Similarity=0.292 Sum_probs=71.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCC-------CC---HHH------------------------
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-------FT---ADI------------------------ 206 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~-------~~---~~~------------------------ 206 (433)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+....+. .+ ..+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 35689999999999999999999999999999865422100 00 000
Q ss_pred ----------------------HHHHHHHHHh--cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 207 ----------------------AAFYEGYYAN--KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 207 ----------------------~~~l~~~l~~--~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
...+.+.|.+ .+++++++++|++++.++++ ..|++.+|+++.+|.||.|.|...
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~--v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKK--WTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSS--EEEEETTSCCEEESEEEECSCTTC
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCE--EEEEECCCcEEecCEEEECCCcch
Confidence 0012222221 13678999999999874333 468888998899999999999765
Q ss_pred Ch
Q 013952 263 LI 264 (433)
Q Consensus 263 ~~ 264 (433)
..
T Consensus 183 ~v 184 (398)
T 2xdo_A 183 KV 184 (398)
T ss_dssp SC
T ss_pred hH
Confidence 43
No 276
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.04 E-value=2.7e-05 Score=76.93 Aligned_cols=100 Identities=24% Similarity=0.252 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC--------------------------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------------------------- 198 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~-------------------------------------------- 198 (433)
..|+|||+|+.|+-+|..|++.|.+|+++++.+...
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 85 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLAE 85 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEEe
Confidence 479999999999999999999999999998764210
Q ss_pred -------------------------CC----CCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCc--EEEEEeCCC-
Q 013952 199 -------------------------PR----LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGE--VKEVKLKDG- 246 (433)
Q Consensus 199 -------------------------~~----~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~--~~~v~~~~g- 246 (433)
+. .-...+.+.+.+.+++.|+++++++++++++.+++++ ...+.+.++
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~ 165 (535)
T 3ihg_A 86 SVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPD 165 (535)
T ss_dssp SSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETT
T ss_pred ccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCC
Confidence 00 0012456677888888899999999999998744411 345666555
Q ss_pred --cEEECCEEEEcccCcc
Q 013952 247 --RTLEADIVVVGVGGRP 262 (433)
Q Consensus 247 --~~i~~d~vi~a~G~~p 262 (433)
.++.||.||.|.|...
T Consensus 166 ~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 166 GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEEEEEEEEECCCTTC
T ss_pred CeEEEEeCEEEECCCCcc
Confidence 6899999999999754
No 277
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.03 E-value=5.2e-06 Score=81.14 Aligned_cols=100 Identities=13% Similarity=0.269 Sum_probs=69.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC---------CCCC-HHHHHHHHHHH--HhcCcEEEcCCeEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP---------RLFT-ADIAAFYEGYY--ANKGIKIIKGTVAVGF 230 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~---------~~~~-~~~~~~l~~~l--~~~GV~v~~~~~v~~i 230 (433)
++|+|||+|+.|+.+|..|.+.+.+|++|++.+.+.- ..++ .++...+.+.+ ++.+++++.+ ++++|
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~-~v~~I 121 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA-EATSI 121 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE-EEEEE
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE-EEEEE
Confidence 4899999999999999999999999999998865321 0011 12222233333 3457888765 68888
Q ss_pred EecCCCcEEEEEe------------------CCCcEEECCEEEEcccCccChh
Q 013952 231 TTNADGEVKEVKL------------------KDGRTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 231 ~~~~~g~~~~v~~------------------~~g~~i~~d~vi~a~G~~p~~~ 265 (433)
+. +.+...+.. .++.++++|.+|+|+|.+|+..
T Consensus 122 D~--~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~ 172 (502)
T 4g6h_A 122 NP--DRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTF 172 (502)
T ss_dssp EG--GGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCT
T ss_pred Eh--hhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccC
Confidence 76 333333322 3456899999999999988764
No 278
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.02 E-value=1.5e-05 Score=77.87 Aligned_cols=99 Identities=16% Similarity=0.182 Sum_probs=71.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc----CCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhH
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ----GVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEW 80 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~----g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (433)
..+++|||||+.|+-+|..|++. |.+ |+++++...+..+. ++. .....+.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~---V~~v~~~~~~~~~~--------------l~~-------~~~~~~~~~ 235 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTE---VIQLFPEKGNMGKI--------------LPE-------YLSNWTMEK 235 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCE---EEEECSSSSTTTTT--------------SCH-------HHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCE---EEEEecCccccccc--------------CCH-------HHHHHHHHH
Confidence 36899999999999999998873 444 99998761111100 000 001234566
Q ss_pred HHhCCcEEEeCceEEEEECCCC--EEEeCCCcEEecceEEEccCCCccc
Q 013952 81 YKEKGIELILSTEIVRADIASK--TLLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 81 ~~~~~v~~~~~~~v~~i~~~~~--~v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
+++.|++++.++.+..++.++. .|.+.+|+++.+|.+|+|+|..|..
T Consensus 236 l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 236 VRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNV 284 (493)
T ss_dssp HHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccH
Confidence 7789999999999999875443 4677888899999999999998764
No 279
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.02 E-value=1.3e-05 Score=77.72 Aligned_cols=96 Identities=19% Similarity=0.268 Sum_probs=72.1
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-+|..|++.|.+ |+++++...... .. . .....+.+.+++.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~---~~---------~-----------~~~~~l~~~l~~~ 229 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSK---VTVLARNTLFFR---ED---------P-----------AIGEAVTAAFRAE 229 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCTTTT---SC---------H-----------HHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEEECCccCC---CC---------H-----------HHHHHHHHHHHhC
Confidence 36899999999999999999999876 999998811110 00 0 0013456677889
Q ss_pred CcEEEeCceEEEEECCCCE--EEeCCCcEEecceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADIASKT--LLSATGLIFKYQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~--v~~~~~~~~~~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..++.++.. +.+. +.++++|.+|+|+|..|..
T Consensus 230 Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 230 GIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp TCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 9999999999999765543 4454 5579999999999998764
No 280
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.02 E-value=2.3e-05 Score=77.79 Aligned_cols=99 Identities=23% Similarity=0.272 Sum_probs=76.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-------------------------------------CC----C
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------------------------------PR----L 201 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~-------------------------------------~~----~ 201 (433)
..|+|||+|+.|+-+|..|++.|.+|+++++.+... .. .
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 129 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQG 129 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTTC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccccc
Confidence 479999999999999999999999999998753210 00 0
Q ss_pred ----------------CCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe--CCC-cEEECCEEEEcccCcc
Q 013952 202 ----------------FTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL--KDG-RTLEADIVVVGVGGRP 262 (433)
Q Consensus 202 ----------------~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~--~~g-~~i~~d~vi~a~G~~p 262 (433)
....+.+.+.+.+++.|++++++++|++++.++++ ..|++ .+| +++.+|.||.|.|.+.
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~--v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 130 LDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEA--VEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp CBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSC--EEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred ccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCe--EEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 01356677788888889999999999999874444 34555 677 6899999999999765
Q ss_pred C
Q 013952 263 L 263 (433)
Q Consensus 263 ~ 263 (433)
.
T Consensus 208 ~ 208 (570)
T 3fmw_A 208 T 208 (570)
T ss_dssp H
T ss_pred h
Confidence 3
No 281
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.01 E-value=9.6e-06 Score=78.63 Aligned_cols=98 Identities=21% Similarity=0.176 Sum_probs=73.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||+|+.|+..|..+++.|.+ |+++++...... ... . .....+.+.+++.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vt~v~~~~~~l~--~~~---------~-----------~~~~~l~~~l~~~ 224 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVK---TTLIYRGKEILS--RFD---------Q-----------DMRRGLHAAMEEK 224 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSST--TSC---------H-----------HHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCe---EEEEEcCCcccc--ccC---------H-----------HHHHHHHHHHHHC
Confidence 46899999999999999999998876 999988721110 000 0 0013345667889
Q ss_pred CcEEEeCceEEEEECCC-C--EEE-eCCCcEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIAS-K--TLL-SATGLIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~-~--~v~-~~~~~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..+..++ . .|. +.+++ +.+|.+|+|+|..|...
T Consensus 225 Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 225 GIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp TCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred CCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 99999999999998753 2 566 77777 99999999999887644
No 282
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.01 E-value=1.3e-05 Score=78.02 Aligned_cols=99 Identities=13% Similarity=0.224 Sum_probs=72.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||+|+.|+-.|..|++.|.+ |+++++...... .+. ......+.+.+++.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~~~l~------------------~~~----~~~~~~l~~~l~~~ 234 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAE---VTVLEAMDKFLP------------------AVD----EQVAKEAQKILTKQ 234 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSSSST------------------TSC----HHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---EEEEecCCCcCc------------------ccC----HHHHHHHHHHHHhC
Confidence 46899999999999999999999876 999998811110 000 00013345667889
Q ss_pred CcEEEeCceEEEEECCCC--EEEeCCC---cEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASK--TLLSATG---LIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~--~v~~~~~---~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..+..+++ .+.+.++ +++.+|.+++|+|..|...
T Consensus 235 Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 235 GLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp TEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCT
T ss_pred CCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCC
Confidence 999999999999986554 3555544 5799999999999888653
No 283
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.00 E-value=6.8e-06 Score=83.14 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=31.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHH-----cCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAK-----QGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~-----~g~~~~~V~lie~~ 40 (433)
.+||+||||||+||++|..|++ .|++ |+|||+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~---v~viE~~ 45 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLK---VRIIDKR 45 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCC---EEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCC---EEEEeCC
Confidence 5799999999999999999999 9988 9999987
No 284
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.99 E-value=9.5e-05 Score=73.05 Aligned_cols=57 Identities=30% Similarity=0.480 Sum_probs=46.2
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccCh
Q 013952 207 AAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 207 ~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~~ 264 (433)
.+.+.+.+++.||+++.+ +|+++..++++.+..|.+.+|+++.+|.||.|+|.....
T Consensus 168 ~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 168 ADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 345566677789999999 899998755666678888888889999999999976544
No 285
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.98 E-value=4e-06 Score=81.09 Aligned_cols=37 Identities=27% Similarity=0.353 Sum_probs=33.6
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|++.++||+|||||++||+||.+|++.|++ |+|+|++
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~ 37 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLS---VAVIEAR 37 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCc---EEEEECC
Confidence 666678999999999999999999999987 9999998
No 286
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.95 E-value=1.4e-05 Score=78.12 Aligned_cols=99 Identities=18% Similarity=0.279 Sum_probs=72.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-.|..|++.|.+ |+++++...... .+. ......+.+.+++.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~------------------~~d----~~~~~~l~~~l~~~ 252 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAK---VTVVEFLDTILG------------------GMD----GEVAKQLQRMLTKQ 252 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCE---EEEECSSSSSSS------------------SSC----HHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCE---EEEEeccccccc------------------cCC----HHHHHHHHHHHHhC
Confidence 46899999999999999999999876 999988711110 000 00012345667788
Q ss_pred CcEEEeCceEEEEECCCCE--EEeCC---C--cEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIASKT--LLSAT---G--LIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~--v~~~~---~--~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..+..++.. +.+.+ + .++.+|.+|+|+|..|...
T Consensus 253 gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~ 303 (491)
T 3urh_A 253 GIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTD 303 (491)
T ss_dssp TCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCT
T ss_pred CCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCC
Confidence 9999999999988765543 44432 4 5799999999999887653
No 287
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.95 E-value=3.1e-05 Score=75.06 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=70.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC------------------------------CCCH-HH------
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR------------------------------LFTA-DI------ 206 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~------------------------------~~~~-~~------ 206 (433)
.++|||+|+.|+.+|..|++.|.+|+++++.+.+... .++. .+
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRKDY 85 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHHHh
Confidence 6999999999999999999999999999966543100 0111 11
Q ss_pred ----H--HHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcE--EECCEEEEcccCccChh
Q 013952 207 ----A--AFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRT--LEADIVVVGVGGRPLIS 265 (433)
Q Consensus 207 ----~--~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~--i~~d~vi~a~G~~p~~~ 265 (433)
. ..+.+.+++.||+++.+ .+..+.. ....|.+.+|++ +.+|.+|+|+|.+|...
T Consensus 86 ~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~----~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p 147 (466)
T 3l8k_A 86 VQELRFKQHKRNMSQYETLTFYKG-YVKIKDP----THVIVKTDEGKEIEAETRYMIIASGAETAKL 147 (466)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEESE-EEEEEET----TEEEEEETTSCEEEEEEEEEEECCCEEECCC
T ss_pred heeccccchHHHHHHhCCCEEEEe-EEEEecC----CeEEEEcCCCcEEEEecCEEEECCCCCccCC
Confidence 1 33444556789999887 5666643 235677888888 99999999999877643
No 288
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.94 E-value=1.3e-05 Score=78.19 Aligned_cols=97 Identities=16% Similarity=0.120 Sum_probs=71.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
..+++|||||+.|+-.|..|++.|.+ |+++++. ..+. +.. .....+.+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~l~~--------------------~d~----~~~~~l~~~l~~ 239 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYE---PTVMVRSIVLRG--------------------FDQ----QMAELVAASMEE 239 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSCSSTT--------------------SCH----HHHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCE---EEEEeCCCCCcc--------------------cCH----HHHHHHHHHHHh
Confidence 35899999999999999999999876 9999876 1110 000 001234567788
Q ss_pred CCcEEEeCceEEEEECCCC---EEEeCCCc-----EEecceEEEccCCCcccc
Q 013952 84 KGIELILSTEIVRADIASK---TLLSATGL-----IFKYQILVIATGSTVLRL 128 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~---~v~~~~~~-----~~~~d~lvlAtG~~~~~~ 128 (433)
.|++++.++.+..+...+. .|.+.++. ++.+|.+++|+|..|...
T Consensus 240 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 240 RGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp TTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 9999999999998876332 35555543 789999999999887643
No 289
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.93 E-value=1.2e-05 Score=78.22 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=71.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-+|..|++.|.+ |+++++...... ... . .....+.+.+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~l~--~~d---------~-----------~~~~~~~~~l~~~ 241 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSK---TSLMIRHDKVLR--SFD---------S-----------MISTNCTEELENA 241 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSSSCT--TSC---------H-----------HHHHHHHHHHHHT
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCe---EEEEEeCCcccc--ccC---------H-----------HHHHHHHHHHHHC
Confidence 36899999999999999999999876 999988711110 000 0 0012345677889
Q ss_pred CcEEEeCceEEEEECCC-C---EEEeCC---C----cEEecceEEEccCCCcccc
Q 013952 85 GIELILSTEIVRADIAS-K---TLLSAT---G----LIFKYQILVIATGSTVLRL 128 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~-~---~v~~~~---~----~~~~~d~lvlAtG~~~~~~ 128 (433)
|++++.++.+..+.... . .+.+.+ + .++.+|.+++|+|..|...
T Consensus 242 gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 242 GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 99999999999987543 2 345544 2 5789999999999887653
No 290
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.93 E-value=7.9e-06 Score=77.53 Aligned_cols=34 Identities=18% Similarity=0.350 Sum_probs=31.8
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~-g~~~~~V~lie~~ 40 (433)
.++||+|||||++|++||..|++. |++ |+|+|++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~---v~v~E~~ 40 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKR---VLVLERR 40 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCC---EEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCC---EEEEeCC
Confidence 368999999999999999999998 887 9999998
No 291
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.92 E-value=9.1e-05 Score=72.33 Aligned_cols=102 Identities=23% Similarity=0.387 Sum_probs=78.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC----------------------------------------
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR---------------------------------------- 200 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~---------------------------------------- 200 (433)
....|+|||+|+.|+-+|..|++.|.+|+++++.+.....
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 3468999999999999999999999999999875321100
Q ss_pred ------CC-------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc---EEECCEEEEcccCccCh
Q 013952 201 ------LF-------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR---TLEADIVVVGVGGRPLI 264 (433)
Q Consensus 201 ------~~-------~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~---~i~~d~vi~a~G~~p~~ 264 (433)
.. ...+.+.+.+.+++.|+++++++++.+++.++++ ..+++.++. ++.+|.||.|.|.+...
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~~g~~~~~a~~vVgADG~~S~V 168 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDH--VVVEVEGPDGPRSLTTRYVVGCDGGRSTV 168 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSC--EEEEEECSSCEEEEEEEEEEECCCTTCHH
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCE--EEEEEEcCCCcEEEEeCEEEEccCcccHH
Confidence 00 1356667777888889999999999999874444 356776664 79999999999976543
No 292
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.91 E-value=0.0001 Score=67.47 Aligned_cols=168 Identities=15% Similarity=0.077 Sum_probs=104.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCccCCC---------------------------------C----C
Q 013952 162 NGKAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWCMPR---------------------------------L----F 202 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~~~~~~---------------------------------~----~ 202 (433)
...|+|||+|+.|+.+|..|++. |.+|+++++.+.+... + .
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 45899999999999999999997 9999999876432100 0 0
Q ss_pred CHHHHHHHHHHHHh-cCcEEEcCCeEEEEEecCC----------------C--cEEEEEeC--------------CCcEE
Q 013952 203 TADIAAFYEGYYAN-KGIKIIKGTVAVGFTTNAD----------------G--EVKEVKLK--------------DGRTL 249 (433)
Q Consensus 203 ~~~~~~~l~~~l~~-~GV~v~~~~~v~~i~~~~~----------------g--~~~~v~~~--------------~g~~i 249 (433)
..++.+.+.+.+++ .|++++.++.+.++..+++ + ++..|... +..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 13445666666776 5999999999999876332 2 56666542 22479
Q ss_pred ECCEEEEcccCccCh-hhh-----hccccc-CCCcEEeCCCC-------CC--CCCCeEEcCccccccccccCccccccc
Q 013952 250 EADIVVVGVGGRPLI-SLF-----KGQVAE-NKGGIETDDFF-------KT--SADDVYAVGDVATFPMKLYREMRRVEH 313 (433)
Q Consensus 250 ~~d~vi~a~G~~p~~-~~~-----~~~~~~-~~g~i~vd~~~-------~t--~~~~vfa~Gd~~~~~~~~~~~~~~~~~ 313 (433)
.++.||.|+|..... .++ ..++.. -.|.-..+... .| -+|++|++|=.+.... |.++--+.
T Consensus 239 ~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v~~gl~~~gm~~~~~~---g~~rmgp~ 315 (344)
T 3jsk_A 239 NAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREIVPGLIVGGMELSEID---GANRMGPT 315 (344)
T ss_dssp ECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEEETTEEECGGGHHHHH---TCEECCSC
T ss_pred EcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceEcCCEEEechhhHhhc---CCCCCCcc
Confidence 999999999976542 111 112211 11222222110 12 3699999997664321 22221133
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 013952 314 VDHARKSAEQAVKTIMATE 332 (433)
Q Consensus 314 ~~~A~~~g~~aa~~i~~~~ 332 (433)
...=...|+.||+.|+..+
T Consensus 316 fg~m~~sg~~~a~~~~~~~ 334 (344)
T 3jsk_A 316 FGAMALSGVKAAHEAIRVF 334 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred cceeeecCHHHHHHHHHHH
Confidence 3333467888888877543
No 293
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.90 E-value=1e-05 Score=78.18 Aligned_cols=60 Identities=17% Similarity=0.086 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecC-CCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNA-DGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~-~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
...+.+.+.+.+++.|++++++++|++|.... ++++..|.+ +|+++.||.||+++|..|.
T Consensus 241 ~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 241 LGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp TTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 35788899999999999999999999998732 566667777 4778999999999997653
No 294
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.87 E-value=8.3e-06 Score=80.25 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=33.8
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 219 IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 219 V~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
.+++++++|++|..+ ++..+.|.+.+|+.+.||.||++++.
T Consensus 215 ~~i~~~~~V~~I~~~-~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 215 NWLKLSCEVKSITRE-PSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp GGEETTCCEEEEEEC-TTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred CEEEECCEEEEEEEc-CCCeEEEEECCCcEEECCEEEECCCH
Confidence 579999999999873 23346788899988999999999873
No 295
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.85 E-value=7.1e-05 Score=71.23 Aligned_cols=101 Identities=19% Similarity=0.213 Sum_probs=74.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCe-EEEEccCCccCCCC---------------------------------------
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNID-VSMVYPEPWCMPRL--------------------------------------- 201 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~-V~li~~~~~~~~~~--------------------------------------- 201 (433)
..+|+|||+|+.|+.+|..|++.|.+ |+++++.+.+.+..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 35899999999999999999999999 99998765421100
Q ss_pred ---------------------CCHHHHHHHHHHHHh-cC-cEEEcCCeEEEEEecCCCcEEEEEeCC---C--cEEECCE
Q 013952 202 ---------------------FTADIAAFYEGYYAN-KG-IKIIKGTVAVGFTTNADGEVKEVKLKD---G--RTLEADI 253 (433)
Q Consensus 202 ---------------------~~~~~~~~l~~~l~~-~G-V~v~~~~~v~~i~~~~~g~~~~v~~~~---g--~~i~~d~ 253 (433)
....+.+.+.+.+++ .| ++++++++|+++.. +++ ..+.+.+ | .++.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~--v~v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG--RVLIGARDGHGKPQALGADV 160 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT--EEEEEEEETTSCEEEEEESE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc--cEEEEecCCCCCceEEecCE
Confidence 001445566666665 36 68999999999987 455 3455544 6 5799999
Q ss_pred EEEcccCccChh
Q 013952 254 VVVGVGGRPLIS 265 (433)
Q Consensus 254 vi~a~G~~p~~~ 265 (433)
||.|.|......
T Consensus 161 vV~AdG~~S~vR 172 (410)
T 3c96_A 161 LVGADGIHSAVR 172 (410)
T ss_dssp EEECCCTTCHHH
T ss_pred EEECCCccchhH
Confidence 999999876553
No 296
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.84 E-value=3.4e-05 Score=75.28 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=69.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
..+++|||||+.|+-.|..|++.|.+ |+++++. ..+. +. ......+.+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~l~~--------------------~d----~~~~~~l~~~l~~ 237 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLD---TTVMMRSIPLRG--------------------FD----QQMSSLVTEHMES 237 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT--------------------SC----HHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCc---eEEEEcCccccc--------------------CC----HHHHHHHHHHHHH
Confidence 35799999999999999999999877 9999876 1100 00 0001334567788
Q ss_pred CCcEEEeCceEEEEECC-CC--EEEeCC---Cc--EEecceEEEccCCCcccc
Q 013952 84 KGIELILSTEIVRADIA-SK--TLLSAT---GL--IFKYQILVIATGSTVLRL 128 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~-~~--~v~~~~---~~--~~~~d~lvlAtG~~~~~~ 128 (433)
.|++++.++.+..+... +. .+.+.+ ++ ++.+|.+++|+|..|...
T Consensus 238 ~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 238 HGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp TTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred CCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 99999999888888652 22 344433 44 478999999999887643
No 297
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.83 E-value=0.00014 Score=70.94 Aligned_cols=102 Identities=23% Similarity=0.365 Sum_probs=77.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC----------------------CC-----------------
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP----------------------RL----------------- 201 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~----------------------~~----------------- 201 (433)
....|+|||+|+.|+-+|..|++.|.+|+++++.+.... ..
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 356899999999999999999999999999987532110 00
Q ss_pred ---C-----------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCc---EEECCEEEEcccCccCh
Q 013952 202 ---F-----------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGR---TLEADIVVVGVGGRPLI 264 (433)
Q Consensus 202 ---~-----------~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~---~i~~d~vi~a~G~~p~~ 264 (433)
. ...+.+.+.+.+++.|+++++++++++++.++++ ..+++.++. ++.+|.||.|.|.+...
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~--v~v~~~~~~g~~~~~a~~vVgADG~~S~V 167 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAG--VTVEVRGPEGKHTLRAAYLVGCDGGRSSV 167 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTE--EEEEEEETTEEEEEEESEEEECCCTTCHH
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCe--EEEEEEcCCCCEEEEeCEEEECCCcchHH
Confidence 0 0245667777788889999999999999874443 346666654 79999999999976543
No 298
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.82 E-value=2.6e-05 Score=76.17 Aligned_cols=99 Identities=19% Similarity=0.273 Sum_probs=70.2
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC-------C--C---CHHHHHHHHHHHHhcCcEEEcCCeEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-------L--F---TADIAAFYEGYYANKGIKIIKGTVAVGF 230 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~-------~--~---~~~~~~~l~~~l~~~GV~v~~~~~v~~i 230 (433)
.+|+|||+|+.|+.+|..|++. .+|+++++.+.+... . + ..++...+.+.+ +.|++++.++.+.++
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~~i 186 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSALGV 186 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEECCC
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEEEE
Confidence 5799999999999999999999 999999987654110 0 1 223334444444 669999999999888
Q ss_pred EecCCCcEEEEEeCCCc--EEECCEEEEcccCccCh
Q 013952 231 TTNADGEVKEVKLKDGR--TLEADIVVVGVGGRPLI 264 (433)
Q Consensus 231 ~~~~~g~~~~v~~~~g~--~i~~d~vi~a~G~~p~~ 264 (433)
... +.........+++ .+.+|.+|+|+|..|..
T Consensus 187 ~~~-~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~ 221 (493)
T 1y56_A 187 FDK-GEYFLVPVVRGDKLIEILAKRVVLATGAIDST 221 (493)
T ss_dssp EEC-SSSEEEEEEETTEEEEEEESCEEECCCEEECC
T ss_pred EcC-CcEEEEEEecCCeEEEEECCEEEECCCCCccC
Confidence 762 2222222224453 68999999999987754
No 299
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.82 E-value=1.5e-05 Score=74.28 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=33.4
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCC
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAP 43 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~ 43 (433)
...+||+|||||++||+||+.|++.|++ |+|+|++ ...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~---V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHD---VTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCE---EEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCc---EEEEecccccc
Confidence 3468999999999999999999999986 9999987 443
No 300
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.80 E-value=0.00038 Score=61.88 Aligned_cols=34 Identities=21% Similarity=0.282 Sum_probs=31.3
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 6999999999999999999999999999987643
No 301
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.80 E-value=2e-05 Score=74.20 Aligned_cols=34 Identities=29% Similarity=0.657 Sum_probs=31.8
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+||+|||||++|+++|.+|++.|.+ |+|+|+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~---v~v~E~~ 61 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQR---VLIVDRR 61 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCc---eEEEecc
Confidence 468999999999999999999999987 9999998
No 302
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.80 E-value=1.7e-05 Score=77.47 Aligned_cols=36 Identities=31% Similarity=0.486 Sum_probs=32.8
Q ss_pred CCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 2 m~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+++.+||+|||||++||+||+.|++.|++ |+|+|+.
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~---v~v~E~~ 43 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYK---VTVLEAR 43 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCC---EEEEecc
Confidence 34568999999999999999999999986 9999998
No 303
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.78 E-value=7.6e-06 Score=79.05 Aligned_cols=91 Identities=13% Similarity=0.120 Sum_probs=69.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCccC--------CCC-CCHHHHHHHHHHHHhcCcEEEcCCeEEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCM--------PRL-FTADIAAFYEGYYANKGIKIIKGTVAVG 229 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g--~~V~li~~~~~~~--------~~~-~~~~~~~~l~~~l~~~GV~v~~~~~v~~ 229 (433)
.+++++|||+|+.|+.+|..|.+.| .+|+++++.+.+. +.. ...++...+.+.+++.||+++.++.+.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~- 83 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVG- 83 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBT-
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEe-
Confidence 3679999999999999999999988 9999999876553 211 234567777888889999999987652
Q ss_pred EEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 230 FTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 230 i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
. .|.+.+. .+.+|.||+|||..|
T Consensus 84 ------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 84 ------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp ------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred ------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 1 1223332 468999999999875
No 304
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.77 E-value=4.6e-05 Score=72.45 Aligned_cols=54 Identities=17% Similarity=0.217 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhcCcEEEcCCeEE---------EEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 206 IAAFYEGYYANKGIKIIKGTVAV---------GFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 206 ~~~~l~~~l~~~GV~v~~~~~v~---------~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
+...+.+.+++.|++++++++|+ ++.. +++.+ .|.+.+| ++.||.||+|+|...
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~-~~~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTV-TNTHQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEe-eCCeE-EEEECCc-EEECCEEEECCCccH
Confidence 55667778888999999999999 8765 23333 6766666 799999999999764
No 305
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.77 E-value=6e-05 Score=79.53 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=72.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC-------CC----CHHHHHHHHHHHHhc-CcEEEcCCeEEE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR-------LF----TADIAAFYEGYYANK-GIKIIKGTVAVG 229 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~-------~~----~~~~~~~l~~~l~~~-GV~v~~~~~v~~ 229 (433)
..+++|||+|+.|+.+|..+++.|.+|+++++.+.+... .+ ..++...+.+.+.+. +|+++.++.|.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~ 207 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTTVFG 207 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCEEEe
Confidence 358999999999999999999999999999986543210 01 234555555666664 999999999988
Q ss_pred EEecCCCcEEEEEe---------------CCCcEEECCEEEEcccCccCh
Q 013952 230 FTTNADGEVKEVKL---------------KDGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 230 i~~~~~g~~~~v~~---------------~~g~~i~~d~vi~a~G~~p~~ 264 (433)
+.. ++....+.. .++.++.+|.+|+|||.+|..
T Consensus 208 i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~ 255 (965)
T 2gag_A 208 SYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERP 255 (965)
T ss_dssp EET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECC
T ss_pred eec--CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCC
Confidence 864 333222221 112368999999999987754
No 306
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.75 E-value=1.5e-05 Score=76.45 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=30.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++||+|||||++|+++|..|++.|++ |+|+|+.
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~---V~viE~~ 54 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVD---VTVYTDR 54 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCe---EEEEcCC
Confidence 37999999999999999999999987 9999998
No 307
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.75 E-value=0.00022 Score=69.69 Aligned_cols=57 Identities=16% Similarity=0.131 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEECCEEEEcccCccC
Q 013952 205 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGRPL 263 (433)
Q Consensus 205 ~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~g~--~i~~d~vi~a~G~~p~ 263 (433)
.+...+.+.+++.|++++++++|+++.. ++.+..|.+ .+|+ ++.+|.||.|+|....
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~--~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARR--ENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEE--ETTEEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEE--eCCEEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 3555677777889999999999999987 335667777 3565 7999999999997643
No 308
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.72 E-value=8.3e-05 Score=73.06 Aligned_cols=97 Identities=16% Similarity=0.207 Sum_probs=66.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
..+++|||||+.|+-.|..|++.|.+ |+++++. ..+. +. ......+.+.+++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~---Vtlv~~~~~l~~--------------------~d----~~~~~~~~~~l~~ 262 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLD---VTVMVRSILLRG--------------------FD----QDMANKIGEHMEE 262 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCSSTT--------------------SC----HHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCe---EEEEeccccccc--------------------CC----HHHHHHHHHHHHH
Confidence 35799999999999999999999876 9999876 1110 00 0001234566788
Q ss_pred CCcEEEeCceEEEEECCC----C--EEE--eCCC-c--EEecceEEEccCCCcccc
Q 013952 84 KGIELILSTEIVRADIAS----K--TLL--SATG-L--IFKYQILVIATGSTVLRL 128 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~----~--~v~--~~~~-~--~~~~d~lvlAtG~~~~~~ 128 (433)
.|++++.++.+..+.... . .+. ..++ + ++.+|.+++|+|..|...
T Consensus 263 ~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~ 318 (519)
T 3qfa_A 263 HGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTR 318 (519)
T ss_dssp TTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCS
T ss_pred CCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCC
Confidence 999999997766664321 2 232 2344 2 568999999999988653
No 309
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.72 E-value=2.8e-05 Score=75.70 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=31.3
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g-~~~~~V~lie~~ 40 (433)
+.+||+|||||++||++|.+|++.| .+ |+|+|++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~---v~v~E~~ 42 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKN---WHLYECN 42 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCS---EEEEESS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCC---EEEEeCC
Confidence 4589999999999999999999998 55 9999998
No 310
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.71 E-value=1.7e-05 Score=84.24 Aligned_cols=94 Identities=19% Similarity=0.312 Sum_probs=71.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCccC-------CC-CCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEe
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPWCM-------PR-LFTADIAAFYEGYYANKGIKIIKGTVAVGFTT 232 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~-~V~li~~~~~~~-------~~-~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~ 232 (433)
.++|+|||+|+.|+.+|..|++.|. +|+++++.+.+. +. ..+.++.++..+.+++.||+++.++.+..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~--- 263 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDLGVKIICGKSLSE--- 263 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTTTCEEEESCCBST---
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHCCcEEEcccEecc---
Confidence 4689999999999999999999998 799999875432 11 13567777777889999999999987631
Q ss_pred cCCCcEEEEEeCCCcEEECCEEEEcccC-ccCh
Q 013952 233 NADGEVKEVKLKDGRTLEADIVVVGVGG-RPLI 264 (433)
Q Consensus 233 ~~~g~~~~v~~~~g~~i~~d~vi~a~G~-~p~~ 264 (433)
. .+.+.++.++.+|.||+|||. +|..
T Consensus 264 ---~---~v~~~~~~~~~~d~vvlAtGa~~p~~ 290 (1025)
T 1gte_A 264 ---N---EITLNTLKEEGYKAAFIGIGLPEPKT 290 (1025)
T ss_dssp ---T---SBCHHHHHHTTCCEEEECCCCCEECC
T ss_pred ---c---eEEhhhcCccCCCEEEEecCCCCCCC
Confidence 1 133344445789999999997 5754
No 311
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.69 E-value=2.7e-05 Score=75.76 Aligned_cols=39 Identities=18% Similarity=0.159 Sum_probs=32.8
Q ss_pred cEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 219 IKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 219 V~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
++++++++|++|+.++++ ..|++.+| ++.+|.||+|++.
T Consensus 249 ~~i~~~~~V~~i~~~~~~--~~v~~~~g-~~~ad~vV~a~p~ 287 (475)
T 3lov_A 249 SEIRLETPLLAISREDGR--YRLKTDHG-PEYADYVLLTIPH 287 (475)
T ss_dssp CEEESSCCCCEEEEETTE--EEEECTTC-CEEESEEEECSCH
T ss_pred CEEEcCCeeeEEEEeCCE--EEEEECCC-eEECCEEEECCCH
Confidence 799999999999873333 56888888 7999999999985
No 312
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.68 E-value=2.2e-05 Score=73.13 Aligned_cols=46 Identities=15% Similarity=0.233 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCcc
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p 262 (433)
+..+...+.+.+++.|++++. ++|++++. ++ .+.+|.||+|+|...
T Consensus 141 p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~--~~-----------~~~a~~VV~A~G~~s 186 (351)
T 3g3e_A 141 GKNYLQWLTERLTERGVKFFQ-RKVESFEE--VA-----------REGADVIVNCTGVWA 186 (351)
T ss_dssp HHHHHHHHHHHHHHTTCEEEE-CCCCCHHH--HH-----------HTTCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEE-EEeCCHHH--hh-----------cCCCCEEEECCCcCh
Confidence 567888899999999999998 78877643 11 257999999999654
No 313
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.68 E-value=7.4e-05 Score=76.11 Aligned_cols=97 Identities=13% Similarity=0.091 Sum_probs=70.9
Q ss_pred CeEEEEC--CCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 6 FKYVILG--GGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 6 ~dvvIIG--gG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
.+|+||| +|..|+.+|..|++.|.+ |+++++..... ..... . .....+.+.+++
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~---Vtlv~~~~~l~------~~~~~----~-----------~~~~~l~~~l~~ 579 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYE---VSIVTPGAQVS------SWTNN----T-----------FEVNRIQRRLIE 579 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCE---EEEEESSSSTT------GGGGG----G-----------TCHHHHHHHHHH
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCe---eEEEecccccc------ccccc----c-----------hhHHHHHHHHHH
Confidence 5799999 999999999999999876 99998871110 00000 0 001234667788
Q ss_pred CCcEEEeCceEEEEECCCCEEEe---CCCcEEecceEEEccCCCcc
Q 013952 84 KGIELILSTEIVRADIASKTLLS---ATGLIFKYQILVIATGSTVL 126 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~---~~~~~~~~d~lvlAtG~~~~ 126 (433)
.|++++.++.|..++.++..+.. .+++++.+|.+|+|+|..|.
T Consensus 580 ~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 580 NGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp TTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred CCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 99999999999999876545543 24457999999999998775
No 314
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=97.67 E-value=0.00026 Score=68.52 Aligned_cols=99 Identities=22% Similarity=0.320 Sum_probs=71.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC-------------CCC-----------------------------
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM-------------PRL----------------------------- 201 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~-------------~~~----------------------------- 201 (433)
.|+|||+|..|+.+|..|++.|.+|+++++...-. ...
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 37999999999999999999999999998751000 000
Q ss_pred --------------C----------------------CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeC-
Q 013952 202 --------------F----------------------TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLK- 244 (433)
Q Consensus 202 --------------~----------------------~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~- 244 (433)
+ ...+.+.+.+.+++.||+++.++.+ ++.. +++++..+...
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRV-KDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEE-ETTEEEEEEETT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEE-eCCEEEEEEEEe
Confidence 0 0134455666667789999999999 9876 35666666553
Q ss_pred CCcEEECCEEEEcccCccCh
Q 013952 245 DGRTLEADIVVVGVGGRPLI 264 (433)
Q Consensus 245 ~g~~i~~d~vi~a~G~~p~~ 264 (433)
++.++.+|.||+|+|..+..
T Consensus 159 ~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp TEEECCCSEEEECCCCCGGG
T ss_pred CCCeEEeeeEEECCCCCccc
Confidence 22357899999999976643
No 315
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.64 E-value=3.1e-05 Score=75.90 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=31.4
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+.+||+|||||++||+||..|++.|++ |+|+|++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~---v~v~E~~ 45 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLN---VTVFEAE 45 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCE---EEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEeC
Confidence 358999999999999999999999987 9999999
No 316
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.63 E-value=1e-05 Score=78.12 Aligned_cols=90 Identities=19% Similarity=0.196 Sum_probs=68.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHHh-C------CCeEEEEccCCccC--------CC-CCCHHHHHHHHHHHHhcCcEEEcC
Q 013952 161 KNGKAVVVGGGYIGLELSAALKI-N------NIDVSMVYPEPWCM--------PR-LFTADIAAFYEGYYANKGIKIIKG 224 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~-~------g~~V~li~~~~~~~--------~~-~~~~~~~~~l~~~l~~~GV~v~~~ 224 (433)
++++|+|||+|+.|+.+|..|.+ . +.+|+++++.+.+. +. ....++...+.+.+++.||+++.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~ 81 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGN 81 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEES
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEee
Confidence 35689999999999999999999 7 89999999876543 11 123456777888888899999988
Q ss_pred CeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 225 TVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 225 ~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
..+ +. .|.+.++ .+.+|.||+|||..
T Consensus 82 v~v-------~~---~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 82 VVV-------GE---HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp CCB-------TT---TBCHHHH-HHHSSEEEECCCCC
T ss_pred EEE-------CC---EEEECCC-eEeCCEEEEeeCCC
Confidence 543 11 1334444 47899999999986
No 317
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.62 E-value=8.2e-05 Score=75.53 Aligned_cols=87 Identities=16% Similarity=0.197 Sum_probs=66.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccC---------CCC-CCHHHHHHHHHHHHhcCcEEEcCCeEEEEE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCM---------PRL-FTADIAAFYEGYYANKGIKIIKGTVAVGFT 231 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~---------~~~-~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~ 231 (433)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+. +.. ...++...+.+.+++.||+++.++.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~-- 450 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA-- 450 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS--
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEecH--
Confidence 4689999999999999999999999999999876431 110 0124455677778889999998876531
Q ss_pred ecCCCcEEEEEeCCCcEE-ECCEEEEcccCccChh
Q 013952 232 TNADGEVKEVKLKDGRTL-EADIVVVGVGGRPLIS 265 (433)
Q Consensus 232 ~~~~g~~~~v~~~~g~~i-~~d~vi~a~G~~p~~~ 265 (433)
..+ .+|.+|+|||.+|+..
T Consensus 451 ---------------~~~~~~d~lviAtG~~p~~~ 470 (671)
T 1ps9_A 451 ---------------DQLQAFDETILASGIVPRTP 470 (671)
T ss_dssp ---------------SSSCCSSEEEECCCEEECCC
T ss_pred ---------------HHhhcCCEEEEccCCCcCCC
Confidence 013 7999999999887653
No 318
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.61 E-value=0.00014 Score=72.85 Aligned_cols=97 Identities=13% Similarity=0.184 Sum_probs=66.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
..+++|||||+.|+-+|..|++.|.+ |+++++. ... . .+.. .....+.+.+++.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~-~~l-----~-------------~~d~----~~~~~~~~~l~~~ 339 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGD---VTVMVRS-ILL-----R-------------GFDQ----QMAEKVGDYMENH 339 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESS-CSS-----T-------------TSCH----HHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEECC-cCc-----C-------------cCCH----HHHHHHHHHHHhC
Confidence 35799999999999999999999976 9999876 110 0 0000 0012345567788
Q ss_pred CcEEEeCceEEEEEC------CC---CE--EE--eCCCcEEe--cceEEEccCCCccc
Q 013952 85 GIELILSTEIVRADI------AS---KT--LL--SATGLIFK--YQILVIATGSTVLR 127 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~------~~---~~--v~--~~~~~~~~--~d~lvlAtG~~~~~ 127 (433)
|++++.++.+..+.. +. .. +. ..+++++. +|.+++|+|.+|..
T Consensus 340 gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 340 GVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp TCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECG
T ss_pred CCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcccc
Confidence 999999877766632 11 22 22 34666555 99999999988864
No 319
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.58 E-value=4.4e-05 Score=71.90 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHc--CCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQ--GVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~--g~~~~~V~lie~~ 40 (433)
+||+|||||++|+++|..|++. |.+ |+|+|+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~---V~v~E~~ 34 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWA---IDIVEKN 34 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSE---EEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCC---EEEEECC
Confidence 3899999999999999999999 887 9999998
No 320
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.56 E-value=6.8e-05 Score=71.89 Aligned_cols=59 Identities=14% Similarity=0.124 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
...+.+.+.+.+++.|++++++++|++|.. .++++..+.. +|+++.||.||+++|..+.
T Consensus 233 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~~-~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 233 LGELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKS-EGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp TTHHHHHHHHHHHHHTCCCBCSCCCCEEEE-ETTEEEEEEE-TTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEE-eCCEEEEEEE-CCeEEECCEEEECCCCCcc
Confidence 457888899999999999999999999987 4566655664 6778999999999998763
No 321
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.55 E-value=5.4e-05 Score=73.64 Aligned_cols=53 Identities=13% Similarity=0.124 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCcEEECCEEEEcccCc
Q 013952 204 ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 204 ~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~g~~i~~d~vi~a~G~~ 261 (433)
..+.+.+.+.+ |++++++++|++|..++++ ..|.+ .+|+++.||.||+|++..
T Consensus 238 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~~~~--~~v~~~~~~~g~~~~ad~vV~a~~~~ 293 (478)
T 2ivd_A 238 QVLIDALAASL---GDAAHVGARVEGLAREDGG--WRLIIEEHGRRAELSVAQVVLAAPAH 293 (478)
T ss_dssp HHHHHHHHHHH---GGGEESSEEEEEEECC--C--CEEEEEETTEEEEEECSEEEECSCHH
T ss_pred HHHHHHHHHHh---hhhEEcCCEEEEEEecCCe--EEEEEeecCCCceEEcCEEEECCCHH
Confidence 45555555544 6799999999999874333 56777 677789999999999853
No 322
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.53 E-value=5e-05 Score=76.43 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=31.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc------CCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ------GVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~------g~~~~~V~lie~~ 40 (433)
++||||||||+|||+||++|++. |.+ |+|||+.
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~---V~vleK~ 60 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAK---ILLVDKA 60 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCC---EEEECSS
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCc---EEEEEec
Confidence 58999999999999999999997 887 9999997
No 323
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.53 E-value=6.6e-05 Score=73.42 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=31.8
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+||+|||||++||+||..|++.|.+ |+|+|++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~---v~vlE~~ 65 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQ---VTVLEAS 65 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCE---EEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 468999999999999999999999987 9999998
No 324
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.52 E-value=8.3e-05 Score=68.71 Aligned_cols=32 Identities=19% Similarity=0.353 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+||+|||||+||+.||..|++.|.+ |+|+|+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~---V~liE~~ 33 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVP---VRLFEMR 33 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECCT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCc---EEEEecc
Confidence 5999999999999999999999988 9999987
No 325
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.50 E-value=6.7e-05 Score=70.20 Aligned_cols=32 Identities=31% Similarity=0.607 Sum_probs=30.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+||+|||||++|+++|.+|++.|.+ |+|+|++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKK---VLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCC---EEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc---EEEEecC
Confidence 6999999999999999999999987 9999998
No 326
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.48 E-value=7.6e-05 Score=70.30 Aligned_cols=33 Identities=33% Similarity=0.562 Sum_probs=31.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++||+|||||++|+++|..|++.|++ |+|+|++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~---v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQ---VHIIDQR 35 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCc---EEEEEec
Confidence 58999999999999999999998876 9999998
No 327
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.40 E-value=0.001 Score=66.36 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=71.3
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCccCC------------------------------C-CC-------
Q 013952 163 GKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWCMP------------------------------R-LF------- 202 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g--~~V~li~~~~~~~~------------------------------~-~~------- 202 (433)
-.|+|||+|..|+-+|..|++.| .+|+++++.+.... . ..
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~~ 85 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDY 85 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHHH
Confidence 37999999999999999999999 99999987532100 0 00
Q ss_pred -----------------------------------------------CHHHHHHHHHHHHhcC-cEEEcCCeEEEEEecC
Q 013952 203 -----------------------------------------------TADIAAFYEGYYANKG-IKIIKGTVAVGFTTNA 234 (433)
Q Consensus 203 -----------------------------------------------~~~~~~~l~~~l~~~G-V~v~~~~~v~~i~~~~ 234 (433)
...+...+.+.+++.| |++++++.+.++.. +
T Consensus 86 ~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~-~ 164 (602)
T 1kf6_A 86 FVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV-D 164 (602)
T ss_dssp HHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE-E
T ss_pred HHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE-e
Confidence 0133444555566678 99999999999986 3
Q ss_pred CCcEEEEEe---CCCc--EEECCEEEEcccC
Q 013952 235 DGEVKEVKL---KDGR--TLEADIVVVGVGG 260 (433)
Q Consensus 235 ~g~~~~v~~---~~g~--~i~~d~vi~a~G~ 260 (433)
++++.++.. .+|+ .+.++.||+|+|.
T Consensus 165 ~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 165 DGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp TTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred CCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 566655543 5675 6899999999995
No 328
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.35 E-value=0.0011 Score=66.84 Aligned_cols=100 Identities=23% Similarity=0.227 Sum_probs=73.8
Q ss_pred CcEEEECCCHHHHHHHHHHHh-CCCeEEEEccCCccCC------------------------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKI-NNIDVSMVYPEPWCMP------------------------------------------ 199 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~-~g~~V~li~~~~~~~~------------------------------------------ 199 (433)
..|+|||+|+.|+.+|..|++ .|.+|+++++.+....
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 112 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDPG 112 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECTT
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCCC
Confidence 379999999999999999999 9999999986532100
Q ss_pred --C----------------C-----CC-HHHHHHHHHHHHhcCc--EEEcCCeEEEEEecCC--CcEEEEEeC------C
Q 013952 200 --R----------------L-----FT-ADIAAFYEGYYANKGI--KIIKGTVAVGFTTNAD--GEVKEVKLK------D 245 (433)
Q Consensus 200 --~----------------~-----~~-~~~~~~l~~~l~~~GV--~v~~~~~v~~i~~~~~--g~~~~v~~~------~ 245 (433)
. . .+ ..+.+.+.+.+++.|+ ++++++++++++.+++ +....+++. +
T Consensus 113 ~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~ 192 (639)
T 2dkh_A 113 QPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHA 192 (639)
T ss_dssp STTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGT
T ss_pred CCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCC
Confidence 0 0 01 2566677788888877 9999999999987442 222445543 4
Q ss_pred C--cEEECCEEEEcccCcc
Q 013952 246 G--RTLEADIVVVGVGGRP 262 (433)
Q Consensus 246 g--~~i~~d~vi~a~G~~p 262 (433)
| +++.+|.||.|.|.+.
T Consensus 193 G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 193 GQIETVQARYVVGCDGARS 211 (639)
T ss_dssp TCEEEEEEEEEEECCCTTC
T ss_pred CCeEEEEeCEEEECCCcch
Confidence 5 5799999999999643
No 329
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.30 E-value=0.00034 Score=71.61 Aligned_cols=98 Identities=17% Similarity=0.100 Sum_probs=68.6
Q ss_pred cCeEEEEC--CCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 5 SFKYVILG--GGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 5 ~~dvvIIG--gG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
..+|+||| ||..|+-+|..|++.|.+ |+++++.. .. ....+.. ......+.++
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~---Vtlv~~~~-l~-----~~~~~~~----------------~~~~~~~~l~ 582 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHE---VTIVSGVH-LA-----NYMHFTL----------------EYPNMMRRLH 582 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCE---EEEEESSC-TT-----HHHHHTT----------------CHHHHHHHHH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCE---EEEEeccc-cc-----ccccccc----------------cHHHHHHHHH
Confidence 35899999 999999999999999876 99999882 10 0000000 0123456677
Q ss_pred hCCcEEEeCceEEEEECCCCEEEe--CCC-cE------------------EecceEEEccCCCccc
Q 013952 83 EKGIELILSTEIVRADIASKTLLS--ATG-LI------------------FKYQILVIATGSTVLR 127 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~--~~~-~~------------------~~~d~lvlAtG~~~~~ 127 (433)
+.||+++.++.+..++.+...+.. .++ ++ +.+|.||+|+|..|..
T Consensus 583 ~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 583 ELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp HTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred hCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 899999999999999865433332 222 22 8999999999987753
No 330
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.28 E-value=0.00014 Score=68.48 Aligned_cols=87 Identities=18% Similarity=0.162 Sum_probs=67.8
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCeEEEEccCCcc----------------------C-CC------------------
Q 013952 164 KAVVVGGGYIGLELSAALKIN--NIDVSMVYPEPWC----------------------M-PR------------------ 200 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~--g~~V~li~~~~~~----------------------~-~~------------------ 200 (433)
+|+|||+|+.|+.+|..|++. |.+|+++++.+.+ . ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 689999999999999999999 9999999876433 0 00
Q ss_pred -------------CCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 201 -------------LFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 201 -------------~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
....++.+.+.+.+++.|++++++++|++++. . ..+.+|.||.|.|....
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~-----------~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L-----------PLADYDLVVLANGVNHK 144 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C-----------CGGGCSEEEECCGGGGG
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c-----------ccccCCEEEECCCCCch
Confidence 00146677888888888999999999988753 1 12579999999997653
No 331
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.22 E-value=0.00026 Score=68.67 Aligned_cols=54 Identities=20% Similarity=0.289 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhc--------CcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 205 DIAAFYEGYYANK--------GIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 205 ~~~~~l~~~l~~~--------GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
.+.+.+.+.+.+. |++++++++|++|...+++ ..|.+.+|+++.+|.||+|++.
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~--v~v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGG--VTVKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSC--EEEEETTSCEEEESEEEECSCH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCc--EEEEECCCCEEEcCEEEEecCH
Confidence 4555565555543 7899999999999874333 4588899989999999999884
No 332
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.21 E-value=0.0016 Score=64.37 Aligned_cols=96 Identities=17% Similarity=0.263 Sum_probs=68.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCC-------------------------------------------
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMP------------------------------------------- 199 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~------------------------------------------- 199 (433)
..|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~~ 106 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTRV 106 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESSB
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEeccC
Confidence 3799999999999999999999999999987532100
Q ss_pred -C-----C--------------------CC-HHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---C--c
Q 013952 200 -R-----L--------------------FT-ADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---G--R 247 (433)
Q Consensus 200 -~-----~--------------------~~-~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---g--~ 247 (433)
. . ++ ..+.+.+.+.+++. +++++++++++.++++ ..+++.+ | .
T Consensus 107 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~--v~v~~~~~~~G~~~ 181 (549)
T 2r0c_A 107 GGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDH--VRATITDLRTGATR 181 (549)
T ss_dssp TSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSC--EEEEEEETTTCCEE
T ss_pred CCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCE--EEEEEEECCCCCEE
Confidence 0 0 00 13445555666555 8899999999874444 3355543 5 4
Q ss_pred EEECCEEEEcccCccC
Q 013952 248 TLEADIVVVGVGGRPL 263 (433)
Q Consensus 248 ~i~~d~vi~a~G~~p~ 263 (433)
++.+|.||.|.|.+..
T Consensus 182 ~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 182 AVHARYLVACDGASSP 197 (549)
T ss_dssp EEEEEEEEECCCTTCH
T ss_pred EEEeCEEEECCCCCcH
Confidence 7999999999997543
No 333
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.20 E-value=0.0011 Score=65.14 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
-.|+|||+|..|+-+|..+++ |.+|+++++.+.
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 479999999999999999999 999999987643
No 334
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.18 E-value=0.00017 Score=71.10 Aligned_cols=55 Identities=11% Similarity=0.061 Sum_probs=39.7
Q ss_pred HHHhcCcEEEcCCeEEEEEecCC--CcEEEEEeC--CCc--EE---ECCEEEEcccCccChhhh
Q 013952 213 YYANKGIKIIKGTVAVGFTTNAD--GEVKEVKLK--DGR--TL---EADIVVVGVGGRPLISLF 267 (433)
Q Consensus 213 ~l~~~GV~v~~~~~v~~i~~~~~--g~~~~v~~~--~g~--~i---~~d~vi~a~G~~p~~~~~ 267 (433)
..++.|+++++++.|+++..+++ +++.+|+.. +|+ ++ .++.||+|+|...+..++
T Consensus 203 ~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL 266 (536)
T 1ju2_A 203 KGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLL 266 (536)
T ss_dssp GSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHH
T ss_pred hhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHH
Confidence 34678999999999999987432 378888774 454 34 568999999965444443
No 335
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.16 E-value=0.00033 Score=69.29 Aligned_cols=58 Identities=10% Similarity=0.200 Sum_probs=43.1
Q ss_pred HHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EE---ECCEEEEcccCccChhhh
Q 013952 209 FYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TL---EADIVVVGVGGRPLISLF 267 (433)
Q Consensus 209 ~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---g~--~i---~~d~vi~a~G~~p~~~~~ 267 (433)
.+....++.++++++++.|++|.. +++++.+|++.+ |+ ++ .++.||+|+|......++
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~-~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL 266 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVR-NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRIL 266 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEE-ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEE-eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHH
Confidence 444444456999999999999987 456788888865 53 34 789999999976555544
No 336
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.10 E-value=0.00034 Score=71.64 Aligned_cols=42 Identities=24% Similarity=0.234 Sum_probs=35.3
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 217 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 217 ~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
.|++++++++|++|..++++ ..|.+.+|+++.+|.||+|++.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~--v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDE--VQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSS--EEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCE--EEEEECCCcEEEcCEEEECCCH
Confidence 37899999999999974444 5688889989999999999963
No 337
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.02 E-value=0.0004 Score=68.37 Aligned_cols=52 Identities=17% Similarity=0.287 Sum_probs=38.1
Q ss_pred HhcCcEEEcCCeEEEEEecCCCcEEEEEeCCC---cEEECCEEEEcccCccChhhh
Q 013952 215 ANKGIKIIKGTVAVGFTTNADGEVKEVKLKDG---RTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 215 ~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g---~~i~~d~vi~a~G~~p~~~~~ 267 (433)
.+.++.+..++.+.++.. +++++..|...+. ..+.++.||+|.|.--...++
T Consensus 222 ~r~nl~v~~~~~v~~i~~-~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 222 GRKNLTILTGSRVRRLKL-EGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp TCTTEEEECSCEEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred CCCCeEEEeCCEEEEEEe-cCCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 456899999999999987 4666767665432 357889999999965444444
No 338
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.99 E-value=0.00054 Score=69.31 Aligned_cols=33 Identities=30% Similarity=0.494 Sum_probs=31.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+||+|||||++|+++|..|++.|++ |+|+|+.
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~---v~~~e~~ 139 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMD---VTLLEAR 139 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEecC
Confidence 57999999999999999999999987 9999998
No 339
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.97 E-value=0.0056 Score=61.13 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=38.6
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEECCEEEEcccCcc
Q 013952 210 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGRP 262 (433)
Q Consensus 210 l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~g~--~i~~d~vi~a~G~~p 262 (433)
+.+.+++.||+++.++.+.++.. +++++.++.. .+|+ .+.++.||+|+|...
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHhCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 33344567899999999999986 4677777665 4564 689999999999543
No 340
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.95 E-value=0.00064 Score=70.20 Aligned_cols=33 Identities=30% Similarity=0.494 Sum_probs=31.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+||+|||||++||+||..|++.|++ |+|+|+.
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~---v~v~E~~ 310 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMD---VTLLEAR 310 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCc---EEEEEec
Confidence 57999999999999999999999987 9999998
No 341
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.94 E-value=0.0005 Score=68.05 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=38.4
Q ss_pred HhcCcEEEcCCeEEEEEecC-CCcEEEEEeC--CCc--EEEC-CEEEEcccCccChhhh
Q 013952 215 ANKGIKIIKGTVAVGFTTNA-DGEVKEVKLK--DGR--TLEA-DIVVVGVGGRPLISLF 267 (433)
Q Consensus 215 ~~~GV~v~~~~~v~~i~~~~-~g~~~~v~~~--~g~--~i~~-d~vi~a~G~~p~~~~~ 267 (433)
++.++++++++.|+++..++ ++++++|++. +|+ ++.| .-||+|+|.-....++
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL 275 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLL 275 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHH
Confidence 45789999999999998743 5678888774 354 4667 4699999965444443
No 342
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.92 E-value=0.007 Score=62.01 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~ 370 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDR 370 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEecccc
Confidence 5899999999999999999999999999987543
No 343
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.92 E-value=0.0094 Score=59.96 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=38.6
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEe---CCCc--EEECCEEEEcccCc
Q 013952 210 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKL---KDGR--TLEADIVVVGVGGR 261 (433)
Q Consensus 210 l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~---~~g~--~i~~d~vi~a~G~~ 261 (433)
+.+.+++.||+++.++.+.++.. +++++.++.. .+|+ .+.++.||+|+|-.
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHhCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 34445567899999999999976 4677666654 4565 48999999999953
No 344
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.86 E-value=0.0069 Score=61.18 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=29.2
Q ss_pred cEEEECCCHHHHHHHHHHHh-----CCCeEEEEccC
Q 013952 164 KAVVVGGGYIGLELSAALKI-----NNIDVSMVYPE 194 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~-----~g~~V~li~~~ 194 (433)
.|+|||+|+.|+-+|..|++ .|.+|+++++.
T Consensus 10 dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~ 45 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKR 45 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCC
Confidence 69999999999999999999 99999999865
No 345
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.85 E-value=0.00051 Score=69.11 Aligned_cols=33 Identities=21% Similarity=0.467 Sum_probs=30.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcC--------CCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQG--------VKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g--------~~~~~V~lie~~ 40 (433)
.++|+|||||++||+||+.|++.| ++ |+|+|++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~---V~v~E~~ 96 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGID---VQIYEAD 96 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEE---EEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCce---EEEEecc
Confidence 479999999999999999999987 55 9999998
No 346
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.83 E-value=0.00078 Score=66.45 Aligned_cols=58 Identities=22% Similarity=0.295 Sum_probs=41.6
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEEeCC---Cc--EEECC-EEEEcccCccChhhh
Q 013952 210 YEGYYANKGIKIIKGTVAVGFTTNADGEVKEVKLKD---GR--TLEAD-IVVVGVGGRPLISLF 267 (433)
Q Consensus 210 l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~---g~--~i~~d-~vi~a~G~~p~~~~~ 267 (433)
+....++.|+++++++.|++|..++++++.+|++.+ |+ ++.|+ .||+|+|..-...++
T Consensus 215 l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL 278 (546)
T 2jbv_A 215 IHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLL 278 (546)
T ss_dssp TGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhh
Confidence 333444689999999999999873337788888743 53 68898 999999964333333
No 347
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.82 E-value=0.001 Score=65.00 Aligned_cols=58 Identities=14% Similarity=0.097 Sum_probs=41.1
Q ss_pred HHHHHHhcCcEEEcCCeEEEEEecCCC-cEEEEEeC--CC-----cEEECCEEEEcccCccChhhh
Q 013952 210 YEGYYANKGIKIIKGTVAVGFTTNADG-EVKEVKLK--DG-----RTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 210 l~~~l~~~GV~v~~~~~v~~i~~~~~g-~~~~v~~~--~g-----~~i~~d~vi~a~G~~p~~~~~ 267 (433)
+....+..++++++++.|++|..++++ ++.+|+.. +| .++.|+.||+|+|..-...++
T Consensus 233 l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 233 LAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp HHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 333334446999999999999884434 67888774 45 368899999999965444433
No 348
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.76 E-value=0.0011 Score=64.71 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.8
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|++|||+|++|+.+|.+|++.|.+ |+|||+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~---v~~~e~~ 37 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQ---TLMLEMG 37 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCc---EEEEeCC
Confidence 368999999999999999999998887 9999998
No 349
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.75 E-value=0.0011 Score=65.86 Aligned_cols=56 Identities=13% Similarity=0.160 Sum_probs=41.1
Q ss_pred HHHHhcCcEEEcCCeEEEEEecCC---CcEEEEEeC--CCc--EEEC-CEEEEcccCccChhhh
Q 013952 212 GYYANKGIKIIKGTVAVGFTTNAD---GEVKEVKLK--DGR--TLEA-DIVVVGVGGRPLISLF 267 (433)
Q Consensus 212 ~~l~~~GV~v~~~~~v~~i~~~~~---g~~~~v~~~--~g~--~i~~-d~vi~a~G~~p~~~~~ 267 (433)
...++.++++++++.|+++..+++ +++.+|+.. +|+ .+.| +.||+|+|.-.+..++
T Consensus 239 ~~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL 302 (587)
T 1gpe_A 239 PNYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLIL 302 (587)
T ss_dssp TTTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHH
T ss_pred HhhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHH
Confidence 344577999999999999976332 477788764 564 5778 8899999976555544
No 350
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.74 E-value=0.00095 Score=66.06 Aligned_cols=60 Identities=12% Similarity=0.213 Sum_probs=43.3
Q ss_pred HHHHHHHHhcCcEEEcCCeEEEEEecC---CCcEEEEEeC--CCc--EEECC-EEEEcccCccChhhh
Q 013952 208 AFYEGYYANKGIKIIKGTVAVGFTTNA---DGEVKEVKLK--DGR--TLEAD-IVVVGVGGRPLISLF 267 (433)
Q Consensus 208 ~~l~~~l~~~GV~v~~~~~v~~i~~~~---~g~~~~v~~~--~g~--~i~~d-~vi~a~G~~p~~~~~ 267 (433)
..+...+++.++++++++.|++|..+. ++++++|++. +|+ ++.|. -||+|+|.--...++
T Consensus 231 ayL~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL 298 (583)
T 3qvp_A 231 EWLLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTIL 298 (583)
T ss_dssp HHTTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHH
T ss_pred HHHHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHH
Confidence 344445567899999999999998742 5678888874 454 46776 599999965444444
No 351
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=96.72 E-value=0.0017 Score=63.48 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=34.9
Q ss_pred HHhcCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccC
Q 013952 214 YANKGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGG 260 (433)
Q Consensus 214 l~~~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~ 260 (433)
+++.|++++++++|++|.. ++. .+.+.+|+++.||.||+++..
T Consensus 232 l~~~g~~i~~~~~V~~I~~--~~~--~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 232 LPKEKTRFGEKGKVTKVNA--NNK--TVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp SCGGGEEESGGGCEEEEET--TTT--EEEETTSCEEEEEEEEECSCH
T ss_pred HHhcCeeeecceEEEEEEc--cCC--EEEEcCCCEEECCEEEECCCH
Confidence 3445889999999999987 342 467889999999999998874
No 352
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.71 E-value=0.0081 Score=58.52 Aligned_cols=61 Identities=11% Similarity=0.172 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhcCcEEEcCCeEEEEEecCCC------cEEEEEeCCC-----cEEECCEEEEcccCccChh
Q 013952 205 DIAAFYEGYYANKGIKIIKGTVAVGFTTNADG------EVKEVKLKDG-----RTLEADIVVVGVGGRPLIS 265 (433)
Q Consensus 205 ~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g------~~~~v~~~~g-----~~i~~d~vi~a~G~~p~~~ 265 (433)
++.++++...++.+..++++++|+++...+.+ ....|++.++ +++.|+.||+|+|..|+..
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEECCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCCCCC
Confidence 56777777778888889999999999864332 2456666543 3689999999999887654
No 353
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.65 E-value=0.015 Score=58.58 Aligned_cols=48 Identities=15% Similarity=0.239 Sum_probs=36.4
Q ss_pred HHHHhc-Cc-EEEcCCeEEEEEecCCC---cEEEEEe---CCCc--EEECCEEEEcccC
Q 013952 212 GYYANK-GI-KIIKGTVAVGFTTNADG---EVKEVKL---KDGR--TLEADIVVVGVGG 260 (433)
Q Consensus 212 ~~l~~~-GV-~v~~~~~v~~i~~~~~g---~~~~v~~---~~g~--~i~~d~vi~a~G~ 260 (433)
+.+++. || +++.++.+.++..+ ++ ++.+|.. .+|+ .+.++.||+|+|.
T Consensus 159 ~~~~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG 216 (643)
T 1jnr_A 159 EAAKMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSVREPKFYVFKAKAVILATGG 216 (643)
T ss_dssp HHHHHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEecCCcEEEEEcCEEEECCCc
Confidence 344455 89 99999999999873 44 7777653 4564 6899999999994
No 354
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.48 E-value=0.0039 Score=59.83 Aligned_cols=130 Identities=15% Similarity=0.119 Sum_probs=79.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHhC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKEK 84 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (433)
.++|.|||.|.+|+++|..|+++|++ |++.|.... . .....+.+++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~---V~~~D~~~~------------------~------------~~~~~~~L~~~ 55 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAI---VTVNDGKPF------------------D------------ENPTAQSLLEE 55 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCE---EEEEESSCG------------------G------------GCHHHHHHHHT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCE---EEEEeCCcc------------------c------------CChHHHHHHhC
Confidence 47899999999999999999999988 999988710 0 01123567778
Q ss_pred CcEEEeCceEEEEECCCCEEEeCCCcEEe-cceEEEccCCCccccCCCCCCCCCC--CCEEEecCHHHHHHHHHHHHhcC
Q 013952 85 GIELILSTEIVRADIASKTLLSATGLIFK-YQILVIATGSTVLRLTDFGVEGADA--KNIFYLREIDDADKLVEAIKAKK 161 (433)
Q Consensus 85 ~v~~~~~~~v~~i~~~~~~v~~~~~~~~~-~d~lvlAtG~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~~ 161 (433)
|+++..+... +. . .-. +|.+|+++|..+..|.. ..... -.++ ...+- +.. +. +
T Consensus 56 gi~~~~g~~~-----~~----~----~~~~~d~vv~spgi~~~~p~~---~~a~~~gi~v~--~~~e~---~~~-~~--~ 111 (451)
T 3lk7_A 56 GIKVVCGSHP-----LE----L----LDEDFCYMIKNPGIPYNNPMV---KKALEKQIPVL--TEVEL---AYL-VS--E 111 (451)
T ss_dssp TCEEEESCCC-----GG----G----GGSCEEEEEECTTSCTTSHHH---HHHHHTTCCEE--CHHHH---HHH-HC--C
T ss_pred CCEEEECCCh-----HH----h----hcCCCCEEEECCcCCCCChhH---HHHHHCCCcEE--eHHHH---HHH-hc--C
Confidence 9988876421 10 0 012 78999999987655541 11111 1233 22221 111 11 3
Q ss_pred CCcEEEECCC---HHHHHHHHHHHhCCCeEEEE
Q 013952 162 NGKAVVVGGG---YIGLELSAALKINNIDVSMV 191 (433)
Q Consensus 162 ~~~v~ViG~G---~~g~e~a~~l~~~g~~V~li 191 (433)
.+.+.|-|+. -+...++..|...|.++.+.
T Consensus 112 ~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~~~ 144 (451)
T 3lk7_A 112 SQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLA 144 (451)
T ss_dssp SEEEEEECSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 4556666653 34456677788888876543
No 355
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.47 E-value=0.0012 Score=65.21 Aligned_cols=61 Identities=15% Similarity=0.212 Sum_probs=42.0
Q ss_pred HHHHHHHHHhcCcEEEcCCeEEEEEec---CC-CcEEEEEeCC--C---cEEEC-CEEEEcccCccChhhh
Q 013952 207 AAFYEGYYANKGIKIIKGTVAVGFTTN---AD-GEVKEVKLKD--G---RTLEA-DIVVVGVGGRPLISLF 267 (433)
Q Consensus 207 ~~~l~~~l~~~GV~v~~~~~v~~i~~~---~~-g~~~~v~~~~--g---~~i~~-d~vi~a~G~~p~~~~~ 267 (433)
...+...+++.++++++++.|++|..+ ++ +++++|++.+ | .++.| .-||+|.|.--...++
T Consensus 211 ~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL 281 (566)
T 3fim_B 211 TAYLRPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILL 281 (566)
T ss_dssp HHTHHHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHH
T ss_pred HHHhhhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHH
Confidence 344555556789999999999999873 12 5677887743 3 25677 6799999954334433
No 356
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.38 E-value=0.0098 Score=57.08 Aligned_cols=100 Identities=16% Similarity=0.301 Sum_probs=61.3
Q ss_pred CCEEEecCHHHHHHHHHHHH--hcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHh
Q 013952 139 KNIFYLREIDDADKLVEAIK--AKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYAN 216 (433)
Q Consensus 139 ~~v~~~~~~~~~~~~~~~~~--~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~ 216 (433)
..++...+..+..++.+.+. +.+.++++|+|||.+|..+|..|.+ ..+|++++. +++-++.+.+.|.
T Consensus 210 D~v~~i~~~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~-~~~v~iIE~---------d~~r~~~la~~l~- 278 (461)
T 4g65_A 210 DEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQ-TYSVKLIER---------NLQRAEKLSEELE- 278 (461)
T ss_dssp CEEEEEEETTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTT-TSEEEEEES---------CHHHHHHHHHHCT-
T ss_pred CEEEEEeccchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhh-cCceEEEec---------CHHHHHHHHHHCC-
Confidence 45555555566666665553 2256899999999999999999865 578999874 4555555555442
Q ss_pred cCcEEEcCCeEEEEEecCCCcEEEEEeCCCcEEECCEEEEcccCc
Q 013952 217 KGIKIIKGTVAVGFTTNADGEVKEVKLKDGRTLEADIVVVGVGGR 261 (433)
Q Consensus 217 ~GV~v~~~~~v~~i~~~~~g~~~~v~~~~g~~i~~d~vi~a~G~~ 261 (433)
+..++.+ |+.-..+....| .-++|.++.+|+..
T Consensus 279 -~~~Vi~G----------D~td~~~L~ee~-i~~~D~~ia~T~~D 311 (461)
T 4g65_A 279 -NTIVFCG----------DAADQELLTEEN-IDQVDVFIALTNED 311 (461)
T ss_dssp -TSEEEES----------CTTCHHHHHHTT-GGGCSEEEECCSCH
T ss_pred -CceEEec----------cccchhhHhhcC-chhhcEEEEcccCc
Confidence 2333222 221111111122 34699999999964
No 357
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=95.94 E-value=0.03 Score=56.25 Aligned_cols=51 Identities=18% Similarity=0.234 Sum_probs=36.4
Q ss_pred HHHHHHhc--CcEEEcCCeEEEEEecCC--CcEEEEEe---CCCc--EEECCEEEEcccC
Q 013952 210 YEGYYANK--GIKIIKGTVAVGFTTNAD--GEVKEVKL---KDGR--TLEADIVVVGVGG 260 (433)
Q Consensus 210 l~~~l~~~--GV~v~~~~~v~~i~~~~~--g~~~~v~~---~~g~--~i~~d~vi~a~G~ 260 (433)
+.+.+++. ||+++.++.+.++..+++ |++.++.. .+|+ .+.|+.||+|||-
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG 231 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGG 231 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCC
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCc
Confidence 34444555 899999998888876333 37777754 3453 5899999999994
No 358
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.90 E-value=0.01 Score=56.97 Aligned_cols=82 Identities=18% Similarity=0.171 Sum_probs=59.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 240 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 240 (433)
.++++.|+|.|.+|+-+|..|.+.|.+|+..+..+... ++ ..+.|++.||+++.+....++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~----~~-----~~~~L~~~gi~~~~g~~~~~~---------- 68 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE----NP-----TAQSLLEEGIKVVCGSHPLEL---------- 68 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG----CH-----HHHHHHHTTCEEEESCCCGGG----------
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC----Ch-----HHHHHHhCCCEEEECCChHHh----------
Confidence 57899999999999999999999999999998764211 11 234577889998876431100
Q ss_pred EEeCCCcEEECCEEEEcccCccChhhh
Q 013952 241 VKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 241 v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
+ ++ .+|.||+++|..|+...+
T Consensus 69 --~-~~---~~d~vv~spgi~~~~p~~ 89 (451)
T 3lk7_A 69 --L-DE---DFCYMIKNPGIPYNNPMV 89 (451)
T ss_dssp --G-GS---CEEEEEECTTSCTTSHHH
T ss_pred --h-cC---CCCEEEECCcCCCCChhH
Confidence 0 00 178999999988776654
No 359
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=95.87 E-value=0.0053 Score=59.60 Aligned_cols=126 Identities=13% Similarity=0.125 Sum_probs=74.7
Q ss_pred CcCeEEEECCCHHHHH-HHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHH
Q 013952 4 KSFKYVILGGGVSAGY-AAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYK 82 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~-aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (433)
+.++|.|||.|-+|++ +|..|.++|++ |++.|... ....+.++
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~---V~~~D~~~---------------------------------~~~~~~l~ 64 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQ---ISGSDLAP---------------------------------NSVTQHLT 64 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCE---EEEECSSC---------------------------------CHHHHHHH
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCe---EEEEECCC---------------------------------CHHHHHHH
Confidence 3478999999999997 69999999987 88887661 01134567
Q ss_pred hCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCC--CCEEEecCHHHHHHHHHHHHhc
Q 013952 83 EKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADA--KNIFYLREIDDADKLVEAIKAK 160 (433)
Q Consensus 83 ~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~--~~v~~~~~~~~~~~~~~~~~~~ 160 (433)
+.|+.+..+... +. + -.+|.+|+++|..+..|. +..... -.++. .. +.+...++
T Consensus 65 ~~gi~~~~g~~~-----~~----~-----~~~d~vV~Spgi~~~~p~---~~~a~~~gi~v~~--~~---e~l~~~~~-- 120 (494)
T 4hv4_A 65 ALGAQIYFHHRP-----EN----V-----LDASVVVVSTAISADNPE---IVAAREARIPVIR--RA---EMLAELMR-- 120 (494)
T ss_dssp HTTCEEESSCCG-----GG----G-----TTCSEEEECTTSCTTCHH---HHHHHHTTCCEEE--HH---HHHHHHHT--
T ss_pred HCCCEEECCCCH-----HH----c-----CCCCEEEECCCCCCCCHH---HHHHHHCCCCEEc--HH---HHHHHHhc--
Confidence 789988876311 10 1 137999999997665443 111111 12332 22 22222222
Q ss_pred CCCcEEEECCC---HHHHHHHHHHHhCCCeEE
Q 013952 161 KNGKAVVVGGG---YIGLELSAALKINNIDVS 189 (433)
Q Consensus 161 ~~~~v~ViG~G---~~g~e~a~~l~~~g~~V~ 189 (433)
..+.+.|-|+. -+...++..|...|.+.+
T Consensus 121 ~~~~IaVTGTnGKTTTt~ml~~iL~~~g~~~~ 152 (494)
T 4hv4_A 121 YRHGIAVAGTHGKTTTTAMLSSIYAEAGLDPT 152 (494)
T ss_dssp TSEEEEEECSSSHHHHHHHHHHHHHHTTCCCE
T ss_pred CCCEEEEecCCChHHHHHHHHHHHHhcCCCCE
Confidence 12346666643 344566777777786533
No 360
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.63 E-value=0.021 Score=52.11 Aligned_cols=80 Identities=19% Similarity=0.228 Sum_probs=58.0
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013952 161 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 239 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e-~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 239 (433)
..+++.|||.|-+|+. +|..|.+.|.+|+..+..+. ++ ..+.|++.||+++.+.....+
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~------~~-----~~~~L~~~gi~v~~g~~~~~l--------- 62 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY------PP-----MSTQLEALGIDVYEGFDAAQL--------- 62 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC------TT-----HHHHHHHTTCEEEESCCGGGG---------
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC------cH-----HHHHHHhCCCEEECCCCHHHc---------
Confidence 4679999999999996 89999999999999987642 11 234577789998765321100
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhh
Q 013952 240 EVKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 240 ~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
.. ..+|.||+++|..|..+.+
T Consensus 63 ----~~---~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 63 ----DE---FKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp ----GS---CCCSEEEECTTCCTTCHHH
T ss_pred ----CC---CCCCEEEECCCcCCCCHHH
Confidence 00 1389999999988876654
No 361
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=95.54 E-value=0.014 Score=58.02 Aligned_cols=61 Identities=8% Similarity=-0.003 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCC-CcEEEEEeCCCcEEECCEEEEcccCccC
Q 013952 203 TADIAAFYEGYYANKGIKIIKGTVAVGFTTNAD-GEVKEVKLKDGRTLEADIVVVGVGGRPL 263 (433)
Q Consensus 203 ~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~-g~~~~v~~~~g~~i~~d~vi~a~G~~p~ 263 (433)
...+.+.+.+.++..|.+++++++|.+|..+.+ |++..|...+|+++.||.||.....-|.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~ 438 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSE 438 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCT
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCH
Confidence 468889999999999999999999999987333 7888888888999999999997766553
No 362
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.47 E-value=0.014 Score=53.29 Aligned_cols=78 Identities=15% Similarity=0.060 Sum_probs=53.4
Q ss_pred cCeEEEECCCHHHHH-HHHHHHHcCCCCCcEEEEcCCCCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGY-AAREFAKQGVKPGELAIISKEVAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~-aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
.++|.|||.|.+|++ +|..|+++|++ |++.|.... ....+.+++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~---V~~~D~~~~--------------------------------~~~~~~L~~ 48 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFE---VSGCDAKMY--------------------------------PPMSTQLEA 48 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCE---EEEEESSCC--------------------------------TTHHHHHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCE---EEEEcCCCC--------------------------------cHHHHHHHh
Confidence 458999999999997 78889999987 999988710 012345667
Q ss_pred CCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccC
Q 013952 84 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLT 129 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~ 129 (433)
.|+++..+... +. +.. ..+|.+|+++|-.+..|.
T Consensus 49 ~gi~v~~g~~~-----~~----l~~---~~~d~vV~Spgi~~~~p~ 82 (326)
T 3eag_A 49 LGIDVYEGFDA-----AQ----LDE---FKADVYVIGNVAKRGMDV 82 (326)
T ss_dssp TTCEEEESCCG-----GG----GGS---CCCSEEEECTTCCTTCHH
T ss_pred CCCEEECCCCH-----HH----cCC---CCCCEEEECCCcCCCCHH
Confidence 78888766321 10 000 147999999997665443
No 363
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.45 E-value=0.011 Score=57.64 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
|+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 68999999999999999999999999999987654
No 364
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.27 E-value=0.024 Score=44.52 Aligned_cols=33 Identities=21% Similarity=0.482 Sum_probs=30.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+.+++|+|+|..|...|..|.+.|++ |+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~---V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKK---VLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCe---EEEEECC
Confidence 35899999999999999999999987 9999987
No 365
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.20 E-value=0.028 Score=44.89 Aligned_cols=33 Identities=15% Similarity=0.291 Sum_probs=30.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+++|+|+|..|...|..|.+.|++ |++++++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~---V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQN---VTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC---EEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 56899999999999999999999887 9999886
No 366
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.13 E-value=0.019 Score=52.40 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=48.8
Q ss_pred HHHHhcCCCcEEEECCCHHHHHHHHHHHh--CCCeEEEEccCCccCCCC------CC-HHHHHHHHHHHHhcCcEEEcCC
Q 013952 155 EAIKAKKNGKAVVVGGGYIGLELSAALKI--NNIDVSMVYPEPWCMPRL------FT-ADIAAFYEGYYANKGIKIIKGT 225 (433)
Q Consensus 155 ~~~~~~~~~~v~ViG~G~~g~e~a~~l~~--~g~~V~li~~~~~~~~~~------~~-~~~~~~l~~~l~~~GV~v~~~~ 225 (433)
+.+.+.....|+|||+|+.|+-+|..|++ .|.+|+++++.+.+.... ++ ..+.+.+.+.+++.|+++..+.
T Consensus 58 ~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~ 137 (326)
T 3fpz_A 58 KDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEG 137 (326)
T ss_dssp HHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECS
T ss_pred hhhhhccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECC
Confidence 33444456789999999999999999974 599999999865432110 11 1112234456678888887665
Q ss_pred eE
Q 013952 226 VA 227 (433)
Q Consensus 226 ~v 227 (433)
..
T Consensus 138 ~~ 139 (326)
T 3fpz_A 138 DY 139 (326)
T ss_dssp SE
T ss_pred cc
Confidence 43
No 367
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.80 E-value=0.032 Score=43.47 Aligned_cols=33 Identities=18% Similarity=0.317 Sum_probs=29.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.++|+|||+|..|...|..|.+.|.+ |++++++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~---v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHD---IVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 35899999999999999999998876 9999877
No 368
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.78 E-value=0.041 Score=43.16 Aligned_cols=32 Identities=13% Similarity=0.258 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+++|||.|..|...|..|.+.|++ |+++|++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~---v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIP---LVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCC---EEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 5799999999999999999999987 9999988
No 369
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.77 E-value=0.028 Score=52.44 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
.|+|||+|+.|+-+|..|++.|.+|+++++.+.+
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4899999999999999999999999999987654
No 370
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.76 E-value=0.031 Score=42.10 Aligned_cols=33 Identities=9% Similarity=0.263 Sum_probs=28.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcC-CCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQG-VKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g-~~~~~V~lie~~ 40 (433)
.++|+|+|+|..|...+..|.+.| ++ |++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~---v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYS---VTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEE---EEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCce---EEEEeCC
Confidence 358999999999999999999988 54 8888877
No 371
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.74 E-value=0.038 Score=44.22 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=30.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|..|...|..|++.|.+ |++++++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~---V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHS---VVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 36899999999999999999998876 9999887
No 372
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.37 E-value=0.045 Score=49.45 Aligned_cols=38 Identities=18% Similarity=0.331 Sum_probs=33.1
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|||+..+|.|||+|..|.+.|..|++.|+ .+|+++|..
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~--~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKEL--ADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCC--CeEEEEecc
Confidence 66667899999999999999999999887 359998876
No 373
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=94.27 E-value=0.054 Score=52.54 Aligned_cols=61 Identities=16% Similarity=0.205 Sum_probs=45.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCC---------C--------HHHHHHHHHHHHhcCcEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLF---------T--------ADIAAFYEGYYANKGIKI 221 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~---------~--------~~~~~~l~~~l~~~GV~v 221 (433)
.+++|+|||+|.+|+.+|..|.+.|.+|+++++.+++..+.. . ......+.+.+++.|+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~ 109 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRL 109 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCc
Confidence 357899999999999999999999999999998765543210 0 011345667777888765
No 374
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.13 E-value=0.062 Score=45.75 Aligned_cols=107 Identities=16% Similarity=0.243 Sum_probs=67.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 240 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 240 (433)
.+++++|||+|.+|...+..|.+.|.+|+++.+. ..++ +.+..++.+++++...- ..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~-------~~~~----l~~l~~~~~i~~i~~~~----~~-------- 86 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT-------VSAE----INEWEAKGQLRVKRKKV----GE-------- 86 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS-------CCHH----HHHHHHTTSCEEECSCC----CG--------
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC-------CCHH----HHHHHHcCCcEEEECCC----CH--------
Confidence 5799999999999999999999999999999763 2444 33444556676653311 00
Q ss_pred EEeCCCcEEECCEEEEcccCccChhhhhcccccCCCcEEeC----CC-CCCCCCCeEEcCccc
Q 013952 241 VKLKDGRTLEADIVVVGVGGRPLISLFKGQVAENKGGIETD----DF-FKTSADDVYAVGDVA 298 (433)
Q Consensus 241 v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~~~g~i~vd----~~-~~t~~~~vfa~Gd~~ 298 (433)
+..-.+|+||.||+.......+.... . .++.|| +. +.--.|.++--|+..
T Consensus 87 -----~dL~~adLVIaAT~d~~~N~~I~~~a--k-~gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 87 -----EDLLNVFFIVVATNDQAVNKFVKQHI--K-NDQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp -----GGSSSCSEEEECCCCTHHHHHHHHHS--C-TTCEEEC-----CCSEECCEEEEETTEE
T ss_pred -----hHhCCCCEEEECCCCHHHHHHHHHHH--h-CCCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 01123899999999764433332111 2 345544 12 233568887777754
No 375
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.07 E-value=0.053 Score=51.33 Aligned_cols=35 Identities=31% Similarity=0.323 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
++|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 36899999999999999999999999999987653
No 376
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=94.06 E-value=0.087 Score=50.44 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=32.3
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+||||||||++||+||..|++.|++ |+|+|++
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~---V~vlE~~ 43 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKK---VLHIDKQ 43 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCe---EEEEeCC
Confidence 468999999999999999999999988 9999999
No 377
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.01 E-value=0.059 Score=42.14 Aligned_cols=33 Identities=15% Similarity=0.364 Sum_probs=29.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+++|+|+|..|...|..|.+.|.+ |++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~---v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHE---VLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---CEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 35799999999999999999998876 8888877
No 378
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=93.89 E-value=0.06 Score=51.26 Aligned_cols=36 Identities=14% Similarity=0.388 Sum_probs=33.1
Q ss_pred CCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 2 m~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|+..+||+|||+|++|+++|..|++.|++ |+++|++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~---v~~~e~~ 38 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKK---VLHMDRN 38 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCc---EEEEecC
Confidence 44578999999999999999999999987 9999998
No 379
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.86 E-value=0.072 Score=51.59 Aligned_cols=77 Identities=18% Similarity=0.148 Sum_probs=56.0
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013952 161 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 239 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e-~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 239 (433)
..+++.|||-|-+|+- +|..|.+.|.+|+..+... .+ ..+.|++.||+++.+.....
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~-------~~-----~~~~l~~~gi~~~~g~~~~~---------- 78 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP-------NS-----VTQHLTALGAQIYFHHRPEN---------- 78 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC-------CH-----HHHHHHHTTCEEESSCCGGG----------
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC-------CH-----HHHHHHHCCCEEECCCCHHH----------
Confidence 3689999999999996 7999999999999987542 11 23457888999887632110
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhh
Q 013952 240 EVKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 240 ~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
+ ..+|.||+++|..+....+
T Consensus 79 ---~-----~~~d~vV~Spgi~~~~p~~ 98 (494)
T 4hv4_A 79 ---V-----LDASVVVVSTAISADNPEI 98 (494)
T ss_dssp ---G-----TTCSEEEECTTSCTTCHHH
T ss_pred ---c-----CCCCEEEECCCCCCCCHHH
Confidence 0 1389999999987765543
No 380
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.86 E-value=0.19 Score=45.64 Aligned_cols=82 Identities=21% Similarity=0.124 Sum_probs=52.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEc--CCeEEEEEecCCCcEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIK--GTVAVGFTTNADGEVKE 240 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~--~~~v~~i~~~~~g~~~~ 240 (433)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.. .... .+.. ..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~----------~-----~~i~~~Gl~~~~~~~g~~-~~~~------~~ 60 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD----------Y-----ETVKAKGIRIRSATLGDY-TFRP------AA 60 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT----------H-----HHHHHHCEEEEETTTCCE-EECC------SC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh----------H-----HHHHhCCcEEeecCCCcE-EEee------ee
Confidence 489999999999999999999999999997642 0 345666776542 1111 0100 01
Q ss_pred EEeCCC-cEE-ECCEEEEcccCccChhhh
Q 013952 241 VKLKDG-RTL-EADIVVVGVGGRPLISLF 267 (433)
Q Consensus 241 v~~~~g-~~i-~~d~vi~a~G~~p~~~~~ 267 (433)
+. .+- +.. .+|.||+|+-.....+.+
T Consensus 61 ~~-~~~~~~~~~~DlVilavK~~~~~~~l 88 (320)
T 3i83_A 61 VV-RSAAELETKPDCTLLCIKVVEGADRV 88 (320)
T ss_dssp EE-SCGGGCSSCCSEEEECCCCCTTCCHH
T ss_pred eE-CCHHHcCCCCCEEEEecCCCChHHHH
Confidence 11 111 122 589999999876655444
No 381
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.81 E-value=0.069 Score=45.46 Aligned_cols=33 Identities=18% Similarity=0.468 Sum_probs=30.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+.|+|||||..|...+..|.+.|.+ |+|++++
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCC---EEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEECCC
Confidence 57899999999999999999999877 9999887
No 382
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.79 E-value=0.21 Score=49.62 Aligned_cols=33 Identities=15% Similarity=0.449 Sum_probs=31.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+|||+|||+|..|-..|..|++.|.+ |++||++
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~---vl~id~~ 40 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQR---VLHVDSR 40 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCE---EEEEcCC
Confidence 69999999999999999999999988 9999999
No 383
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.78 E-value=0.062 Score=50.85 Aligned_cols=34 Identities=32% Similarity=0.377 Sum_probs=31.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCC
Confidence 6899999999999999999999999999987654
No 384
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.67 E-value=0.053 Score=51.57 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3589999999999999999999999999998765
No 385
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.60 E-value=0.081 Score=47.12 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=31.9
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
||. ..+|.|||+|.-|...|..+++.|++ |+++|++
T Consensus 1 Mm~-~~kV~VIGaG~mG~~iA~~la~~G~~---V~l~d~~ 36 (283)
T 4e12_A 1 MTG-ITNVTVLGTGVLGSQIAFQTAFHGFA---VTAYDIN 36 (283)
T ss_dssp CCS-CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCC-CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEeCC
Confidence 553 56899999999999999999999986 9999887
No 386
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=93.45 E-value=0.087 Score=48.89 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC-Cc
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE-PW 196 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~-~~ 196 (433)
...+|+|||+|.+|+-+|..|.+.|.+|+++++. ++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~ 79 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANR 79 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccc
Confidence 3578999999999999999999999999999987 44
No 387
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.45 E-value=0.088 Score=49.80 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=44.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCC-CeEEEEccCCccCCC----------------CCCHHHHHHHHHHHHhcCcEEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWCMPR----------------LFTADIAAFYEGYYANKGIKII 222 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g-~~V~li~~~~~~~~~----------------~~~~~~~~~l~~~l~~~GV~v~ 222 (433)
...+|+|||+|..|+-+|..|++.| .+|+++++.+++... .+.. ....+.+.+++.|+++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~-~~~~~~~l~~~~g~~~~ 82 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP-SYDTIQEIMDRTGDKVD 82 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT-TCHHHHHHHHHHCCCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC-CcHHHHHHHHHhCCccc
Confidence 3568999999999999999999999 899999987654211 0111 12346677788888653
No 388
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.40 E-value=0.078 Score=48.90 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
..|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 389
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.39 E-value=0.11 Score=47.27 Aligned_cols=39 Identities=26% Similarity=0.406 Sum_probs=32.5
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|++...+|.|||+|..|.+.|..|+..++ ..+++++|..
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~-~~~l~l~D~~ 39 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGI-TDELVVIDVN 39 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCC-CceEEEEecc
Confidence 66666799999999999999999999886 2459999876
No 390
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.36 E-value=0.093 Score=48.69 Aligned_cols=33 Identities=27% Similarity=0.333 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
+.|+|||+|..|+++|..+++.|.+|++++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999998754
No 391
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.20 E-value=0.081 Score=50.16 Aligned_cols=34 Identities=29% Similarity=0.430 Sum_probs=31.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
.|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 6899999999999999999999999999986543
No 392
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.19 E-value=0.08 Score=50.98 Aligned_cols=35 Identities=31% Similarity=0.349 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCC--eEEEEccCCcc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNI--DVSMVYPEPWC 197 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~--~V~li~~~~~~ 197 (433)
++|+|||+|.+|+-+|..|++.|. +|++++..+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERL 39 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 589999999999999999999999 99999986543
No 393
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.18 E-value=0.037 Score=52.80 Aligned_cols=78 Identities=13% Similarity=0.143 Sum_probs=55.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKE 240 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~ 240 (433)
.+++++|||.|.+|+..|..|.+.|.+|+..+....... . ..++ .|+++..+... . + .
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~---~--------~~l~-~G~~~~~g~~~----~--~----~ 61 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG---L--------DKLP-EAVERHTGSLN----D--E----W 61 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT---G--------GGSC-TTSCEEESSCC----H--H----H
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch---h--------HHhh-CCCEEEECCCc----H--H----H
Confidence 578999999999999999999999999999987653211 1 2345 78888755421 0 0 0
Q ss_pred EEeCCCcEEECCEEEEcccCccChhhh
Q 013952 241 VKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 241 v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
+ . .+|.||+++|..|+...+
T Consensus 62 ~------~-~~d~vV~s~gi~~~~p~~ 81 (439)
T 2x5o_A 62 L------M-AADLIVASPGIALAHPSL 81 (439)
T ss_dssp H------H-TCSEEEECTTSCTTCHHH
T ss_pred h------c-cCCEEEeCCCCCCCCHHH
Confidence 0 1 378999999987655433
No 394
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.13 E-value=0.085 Score=49.04 Aligned_cols=33 Identities=30% Similarity=0.444 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
..|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 489999999999999999999999999999864
No 395
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.09 E-value=0.12 Score=41.16 Aligned_cols=36 Identities=19% Similarity=0.263 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
..++++|+|+|.+|..++..|.+.|.+|+++++.+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 568999999999999999999999999999987643
No 396
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.08 E-value=0.11 Score=47.04 Aligned_cols=36 Identities=28% Similarity=0.298 Sum_probs=30.7
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++.+|+|||+|..|.+.|..|+..++ ..+|+++|.+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~-~~ev~L~Di~ 41 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT-ANELVLIDVF 41 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC-SSEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 45799999999999999999999876 3569999877
No 397
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.08 E-value=0.091 Score=49.07 Aligned_cols=35 Identities=23% Similarity=0.212 Sum_probs=31.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
..|+|||+|+.|+-+|..|++.|.+|+++++.+..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~ 39 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 36999999999999999999999999999987643
No 398
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.07 E-value=0.12 Score=42.50 Aligned_cols=32 Identities=25% Similarity=0.134 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHc-CCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQ-GVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~-g~~~~~V~lie~~ 40 (433)
.+|+|||+|..|...|..|.+. |++ |+++|++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~---V~vid~~ 72 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKI---SLGIEIR 72 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSC---EEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCe---EEEEECC
Confidence 4799999999999999999998 987 9999888
No 399
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.07 E-value=0.086 Score=49.36 Aligned_cols=34 Identities=26% Similarity=0.347 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
..|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 3799999999999999999999999999998654
No 400
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=93.04 E-value=0.059 Score=52.75 Aligned_cols=34 Identities=18% Similarity=0.395 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHh------------CCCeEEEEccCC
Q 013952 162 NGKAVVVGGGYIGLELSAALKI------------NNIDVSMVYPEP 195 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~------------~g~~V~li~~~~ 195 (433)
..+|+|||+|+.|+-+|..|++ .|.+|+++++.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4689999999999999999999 899999999754
No 401
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.95 E-value=0.11 Score=50.21 Aligned_cols=36 Identities=25% Similarity=0.312 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
..+|+|||+|..|+-+|..|.+.|.+|++++..+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 568999999999999999999999999999877653
No 402
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=92.94 E-value=0.089 Score=49.66 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
..|+|||+|+.|+-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 403
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.94 E-value=0.096 Score=48.80 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
..|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3799999999999999999999999999997653
No 404
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.88 E-value=0.1 Score=48.48 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
...|+|||+|.+|+.+|..|++.|.+|+++++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3589999999999999999999999999999863
No 405
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.86 E-value=0.24 Score=48.91 Aligned_cols=169 Identities=12% Similarity=0.085 Sum_probs=0.0
Q ss_pred CCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-C----------------------------------------
Q 013952 3 EKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-V---------------------------------------- 41 (433)
Q Consensus 3 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~---------------------------------------- 41 (433)
..+.+++|+|.|..|...|..|.+.+.+ |+++|++ .
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~~~~~~---vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~~ 201 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLESRNHL---FVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLS 201 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTTTTTCC---EEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECSC
T ss_pred ccCCeEEEECCChHHHHHHHHHHHCCCC---EEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeCC
Q ss_pred ----------------------------------------------------CCCCCCCccccccCCCCCCCCCCccccc
Q 013952 42 ----------------------------------------------------APYERPALSKAYLFPEGTARLPGFHVCV 69 (433)
Q Consensus 42 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (433)
.....+......+.......+..+...
T Consensus 202 D~~n~~~~~~ar~~~~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~p~~~~~~~~~~~~~~l~e~~v~- 280 (565)
T 4gx0_A 202 DPDNANLCLTVRSLCQTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATTCGALAHILDSFGNLQIAELPVH- 280 (565)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC-----------------------
T ss_pred cHHHHHHHHHHHHhcCceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcccccccchhcccCCceEEEEEEC-
Q ss_pred CCCCCCCCHhHHHhCCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHH
Q 013952 70 GSGGERLLPEWYKEKGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDD 149 (433)
Q Consensus 70 ~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~ 149 (433)
+ .......+.+....-..+..+..+.++++.+.-.....++..-.++-.|...........-+...+
T Consensus 281 ~---s~l~G~~l~el~~~~~~~~~vi~i~r~g~~~~p~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~~---------- 347 (565)
T 4gx0_A 281 G---TPFAGKTIGESGIRQRTGLSIIGVWERGSLTTPQRETVLTEQSLLVLAGTKSQLAALEYLIGEAPE---------- 347 (565)
T ss_dssp ---------------------------------------------------------------------C----------
T ss_pred C---CccCCCCHHHcCcchhcCCEEEEEEECCEEeCCCCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCCC----------
Q ss_pred HHHHHHHHHhcCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCC
Q 013952 150 ADKLVEAIKAKKNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPR 200 (433)
Q Consensus 150 ~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~ 200 (433)
. ++++|+|.|..|..+|..|.+.|.+|++++..+.....
T Consensus 348 -----------~-~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~ 386 (565)
T 4gx0_A 348 -----------D-ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN 386 (565)
T ss_dssp -----------C-CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC
T ss_pred -----------C-CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh
No 406
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.79 E-value=0.11 Score=44.27 Aligned_cols=31 Identities=35% Similarity=0.577 Sum_probs=29.1
Q ss_pred eEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 7 KYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 7 dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+|+|||+|..|...|..|.+.|++ |+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~---v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYG---VVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCC---EEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 699999999999999999999887 9999988
No 407
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.64 E-value=0.12 Score=50.51 Aligned_cols=61 Identities=20% Similarity=0.228 Sum_probs=45.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCC-----------------CCHHHHHHHHHHHHhcCcEEEc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRL-----------------FTADIAAFYEGYYANKGIKIIK 223 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~-----------------~~~~~~~~l~~~l~~~GV~v~~ 223 (433)
..+|+|||+|..|+-+|..|++.|.+|++++..+++..+. +... ...+.+.+++.|++...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~-~~~~~~l~~~lgl~~~~ 81 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPT-QNRILRLAKELGLETYK 81 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTT-CHHHHHHHHHTTCCEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCC-cHHHHHHHHHcCCccee
Confidence 3589999999999999999999999999999876542210 0111 34566778888987643
No 408
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.61 E-value=0.12 Score=47.84 Aligned_cols=33 Identities=27% Similarity=0.452 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 194 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~ 194 (433)
...|+|||+|.+|+-+|..|++.|.+|+++++.
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 357999999999999999999999999999864
No 409
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=92.56 E-value=0.12 Score=47.75 Aligned_cols=36 Identities=28% Similarity=0.278 Sum_probs=29.4
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
||+ +++|.|||+|..|...|..|++.|++ |++++++
T Consensus 1 mm~-~mki~iiG~G~~G~~~a~~L~~~g~~---V~~~~r~ 36 (359)
T 1bg6_A 1 MIE-SKTYAVLGLGNGGHAFAAYLALKGQS---VLAWDID 36 (359)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCC-cCeEEEECCCHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 664 46899999999999999999998876 8888776
No 410
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=92.47 E-value=0.11 Score=50.59 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=32.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEccCCcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWC 197 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g-~~V~li~~~~~~ 197 (433)
..+|+|||+|..|+-+|..|.+.| .+|++++..+++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 358999999999999999999999 999999987654
No 411
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.46 E-value=0.12 Score=47.92 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
.+.|+|||+|.+|+-+|..|+ .|.+|+++++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 579999999999999999999 59999999987543
No 412
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.45 E-value=0.24 Score=44.75 Aligned_cols=83 Identities=19% Similarity=0.197 Sum_probs=51.9
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEVK 242 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v~ 242 (433)
.++.|||+|.+|.-+|..|.+.|.+|+++.|.+ . +.+++.|+.+.....-..+.. ..+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~----------~-----~~i~~~g~~~~~~~g~~~~~~------~~~~ 61 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD----------Y-----EAIAGNGLKVFSINGDFTLPH------VKGY 61 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT----------H-----HHHHHTCEEEEETTCCEEESC------CCEE
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc----------H-----HHHHhCCCEEEcCCCeEEEee------ceee
Confidence 479999999999999999999999999997642 0 335677877643211001100 0111
Q ss_pred eCCCc-EEECCEEEEcccCccChhhh
Q 013952 243 LKDGR-TLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 243 ~~~g~-~i~~d~vi~a~G~~p~~~~~ 267 (433)
.+-+ .-.+|.||+|+-.....+.+
T Consensus 62 -~~~~~~~~~D~vilavk~~~~~~~l 86 (312)
T 3hn2_A 62 -RAPEEIGPMDLVLVGLKTFANSRYE 86 (312)
T ss_dssp -SCHHHHCCCSEEEECCCGGGGGGHH
T ss_pred -cCHHHcCCCCEEEEecCCCCcHHHH
Confidence 1111 12589999998866554444
No 413
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.40 E-value=0.2 Score=39.73 Aligned_cols=34 Identities=12% Similarity=0.234 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 194 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~ 194 (433)
..++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 3578999999999999999999999999999864
No 414
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.36 E-value=0.067 Score=47.10 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=30.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+.|+|||||..|...+..|.+.|.+ |+|++++
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~---VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCK---LTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCE---EEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCE---EEEEcCC
Confidence 47899999999999999999999977 9999988
No 415
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.33 E-value=0.09 Score=50.10 Aligned_cols=129 Identities=13% Similarity=0.171 Sum_probs=76.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC-CCCCCCCCccccccCCCCCCCCCCcccccCCCCCCCCHhHHHh
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE-VAPYERPALSKAYLFPEGTARLPGFHVCVGSGGERLLPEWYKE 83 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (433)
.++|.|||.|.+|+++|+.|+++|++ |++.|.. ..+ ....++
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~---v~~~D~~~~~~---------------------------------~~~~l~- 47 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVT---PRVMDTRMTPP---------------------------------GLDKLP- 47 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCC---CEEEESSSSCT---------------------------------TGGGSC-
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCE---EEEEECCCCcc---------------------------------hhHHhh-
Confidence 46899999999999999999999987 8998887 110 012233
Q ss_pred CCcEEEeCceEEEEECCCCEEEeCCCcEEecceEEEccCCCccccCCCCCCCCCCCCEEEecCHHHHHHHHHHHHhcCCC
Q 013952 84 KGIELILSTEIVRADIASKTLLSATGLIFKYQILVIATGSTVLRLTDFGVEGADAKNIFYLREIDDADKLVEAIKAKKNG 163 (433)
Q Consensus 84 ~~v~~~~~~~v~~i~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 163 (433)
.|+++..+... ... + . .+|.+|+++|..+..|. +......++-.+...+ .+... .+.+
T Consensus 48 ~G~~~~~g~~~------~~~--~----~-~~d~vV~s~gi~~~~p~---~~~a~~~~~~v~~~~~---~~~~~---~~~~ 105 (439)
T 2x5o_A 48 EAVERHTGSLN------DEW--L----M-AADLIVASPGIALAHPS---LSAAADAGIEIVGDIE---LFCRE---AQAP 105 (439)
T ss_dssp TTSCEEESSCC------HHH--H----H-TCSEEEECTTSCTTCHH---HHHHHHTTCEEECHHH---HHHHH---CCSC
T ss_pred CCCEEEECCCc------HHH--h----c-cCCEEEeCCCCCCCCHH---HHHHHHCCCcEEEHHH---HHHHh---cCCC
Confidence 56666655311 000 0 1 47899999997654443 2221112222222222 22222 2455
Q ss_pred cEEEECCC---HHHHHHHHHHHhCCCeEEEEc
Q 013952 164 KAVVVGGG---YIGLELSAALKINNIDVSMVY 192 (433)
Q Consensus 164 ~v~ViG~G---~~g~e~a~~l~~~g~~V~li~ 192 (433)
.+.|-|+. -+...++..|...|.++.+..
T Consensus 106 vI~VTGTnGKTTT~~ml~~iL~~~g~~~~~~g 137 (439)
T 2x5o_A 106 IVAITGSNGKSTVTTLVGEMAKAAGVNVGVGG 137 (439)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 67777753 455667778888888876543
No 416
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.32 E-value=0.13 Score=49.47 Aligned_cols=37 Identities=24% Similarity=0.384 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
...+|+|||+|..|+-+|..|++.|.+|+++++.+++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 3568999999999999999999999999999987754
No 417
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.10 E-value=0.17 Score=46.68 Aligned_cols=37 Identities=30% Similarity=0.306 Sum_probs=30.9
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|.+..++|.|||+|.-|.+.|..|++.|++ |++++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~---V~l~~r~ 61 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQK---VRLWSYE 61 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCC---EEEECSC
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCe---EEEEeCC
Confidence 333456899999999999999999999987 9998876
No 418
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.07 E-value=0.071 Score=51.14 Aligned_cols=35 Identities=23% Similarity=0.501 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC------CeEEEEccCCcc
Q 013952 163 GKAVVVGGGYIGLELSAALKINN------IDVSMVYPEPWC 197 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g------~~V~li~~~~~~ 197 (433)
++|+|||+|.+|+-+|..|++.| .+|+++++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCC
Confidence 58999999999999999999999 999999987654
No 419
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.87 E-value=0.48 Score=42.82 Aligned_cols=31 Identities=19% Similarity=0.356 Sum_probs=28.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEE
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMV 191 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li 191 (433)
...++.|||+|..|.-+|..|++.|.+|+++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 4679999999999999999999999999998
No 420
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.85 E-value=0.17 Score=49.14 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
..+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 468999999999999999999999999999987664
No 421
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=91.84 E-value=0.17 Score=48.28 Aligned_cols=34 Identities=21% Similarity=0.247 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
..|+|||+|..|+.+|..|++.|.+|+++++.+.
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4799999999999999999999999999998754
No 422
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.81 E-value=0.19 Score=45.11 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=29.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|.|||+|.-|...|..|++.|++ |+++|++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~---V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHT---VVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe---EEEEECC
Confidence 45799999999999999999999986 9999887
No 423
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.78 E-value=0.16 Score=48.16 Aligned_cols=35 Identities=23% Similarity=0.388 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccCCc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPEPW 196 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~-~V~li~~~~~ 196 (433)
...|+|||+|..|+-+|..|++.|. +|+++++.+.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 3579999999999999999999999 9999988654
No 424
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.77 E-value=0.16 Score=47.34 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
.+++|||+|.+|+.+|..|.+.|.+|+++++.+.+
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 48999999999999999999999999999886543
No 425
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=91.68 E-value=0.18 Score=46.40 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=30.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|+|+|.+|..+|..|...|.+ +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~--~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVK--NVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCC--eEEEEECC
Confidence 46899999999999999999999963 49999998
No 426
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.65 E-value=0.19 Score=45.51 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=30.9
Q ss_pred CCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 2 m~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|.+..+|.|||+|.-|.+.|..|++.|+. +|+++|.+
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~--~V~l~D~~ 37 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLA--DVVLFDIA 37 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCC--EEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCc--eEEEEeCC
Confidence 33456899999999999999999998871 29999887
No 427
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.60 E-value=0.18 Score=48.18 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
.+|+|||+|..|+-+|..|.+.|.+|+++++.+++
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 47999999999999999999999999999886543
No 428
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.54 E-value=0.18 Score=46.44 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=30.7
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|||+|+|.||+.+|..|...|.+ +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~--~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGAT--KVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCC--EEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCC--eEEEEECC
Confidence 46899999999999999999999973 49999998
No 429
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=91.54 E-value=0.19 Score=46.99 Aligned_cols=35 Identities=26% Similarity=0.368 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
..+++|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~ 63 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPH 63 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCC
Confidence 34799999999999999999999999999997654
No 430
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=91.54 E-value=0.14 Score=47.95 Aligned_cols=33 Identities=27% Similarity=0.320 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHh-CC-CeEEEEccCC
Q 013952 163 GKAVVVGGGYIGLELSAALKI-NN-IDVSMVYPEP 195 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~-~g-~~V~li~~~~ 195 (433)
..|+|||+|..|+.+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 89 9999999865
No 431
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=91.53 E-value=0.33 Score=47.27 Aligned_cols=79 Identities=14% Similarity=0.125 Sum_probs=56.6
Q ss_pred CCCcEEEECCCHHHHH-HHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEE
Q 013952 161 KNGKAVVVGGGYIGLE-LSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVK 239 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e-~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~ 239 (433)
+.+++.+||-|-+|+- +|..|.+.|.+|+..+.... ++ ..+.|++.||+++.+.....+
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~------~~-----~~~~L~~~gi~~~~G~~~~~~--------- 77 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIY------PP-----MSTQLEQAGVTIEEGYLIAHL--------- 77 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------TT-----HHHHHHHTTCEEEESCCGGGG---------
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCC------cH-----HHHHHHHCCCEEECCCCHHHc---------
Confidence 5789999999999997 68889999999999886532 11 234577889998765321111
Q ss_pred EEEeCCCcEEECCEEEEcccCccChhhh
Q 013952 240 EVKLKDGRTLEADIVVVGVGGRPLISLF 267 (433)
Q Consensus 240 ~v~~~~g~~i~~d~vi~a~G~~p~~~~~ 267 (433)
.-.+|.||+++|..|....+
T Consensus 78 --------~~~~d~vV~Spgi~~~~p~l 97 (524)
T 3hn7_A 78 --------QPAPDLVVVGNAMKRGMDVI 97 (524)
T ss_dssp --------CSCCSEEEECTTCCTTSHHH
T ss_pred --------CCCCCEEEECCCcCCCCHHH
Confidence 01378999999987766544
No 432
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.48 E-value=0.18 Score=46.94 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=30.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|.+|+.+|..|+..|.+ |+++|..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~---V~v~D~~ 222 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAV---VSATDVR 222 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCE---EEEEcCC
Confidence 46899999999999999999999976 9999887
No 433
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.47 E-value=0.2 Score=49.34 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCC
Q 013952 162 NGKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEP 195 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~---~g~~V~li~~~~ 195 (433)
..+|+|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 999999999864
No 434
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.44 E-value=0.27 Score=44.42 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=31.1
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
||+...+|.|||+|.-|...|..|.+.|++ |++++++
T Consensus 26 ~~~~~~~I~iIG~G~mG~~~a~~l~~~g~~---V~~~~~~ 62 (316)
T 2uyy_A 26 ITPTDKKIGFLGLGLMGSGIVSNLLKMGHT---VTVWNRT 62 (316)
T ss_dssp CCCCSSCEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 344457899999999999999999998876 8888776
No 435
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.38 E-value=0.2 Score=50.81 Aligned_cols=33 Identities=18% Similarity=0.357 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
..|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 265 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 265 DDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp SSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 589999999999999999999999999999864
No 436
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.34 E-value=0.22 Score=45.10 Aligned_cols=35 Identities=17% Similarity=0.343 Sum_probs=29.9
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
...+|.|||+|..|...|..|+..|+- +|+++|.+
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~--~v~L~Di~ 37 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLG--DVVLFDIV 37 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCC--EEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC--eEEEEeCC
Confidence 346899999999999999999998871 29999877
No 437
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.32 E-value=0.18 Score=48.71 Aligned_cols=36 Identities=22% Similarity=0.442 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWC 197 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~ 197 (433)
..+|+|||+|..|+-+|..|.+.|.+|++++..+++
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 74 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRI 74 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 358999999999999999999999999999987654
No 438
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.29 E-value=0.15 Score=43.45 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=28.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEE-EcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAI-ISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~l-ie~~ 40 (433)
+++|.|||+|.-|.+.|..|.+.|++ |++ .+++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~---V~~v~~r~ 56 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIP---AIIANSRG 56 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCC---EEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCE---EEEEECCC
Confidence 46899999999999999999998876 777 6555
No 439
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.28 E-value=0.2 Score=50.65 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 163 GKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
..|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 589999999999999999999999999999854
No 440
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.25 E-value=0.23 Score=47.72 Aligned_cols=37 Identities=16% Similarity=0.208 Sum_probs=31.2
Q ss_pred CCCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|+|+..+|.|||+|.-|...|..|++.|++ |+++|.+
T Consensus 1 Msm~~~kVgVIGaG~MG~~IA~~la~aG~~---V~l~D~~ 37 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGAGIAEVAASHGHQ---VLLYDIS 37 (483)
T ss_dssp ---CCCCEEEECCSHHHHHHHHHHHHTTCC---EEEECSC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHHCCCe---EEEEECC
Confidence 554567899999999999999999999987 9999887
No 441
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.25 E-value=0.22 Score=38.82 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=30.3
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 194 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~ 194 (433)
.++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 468999999999999999999999999999753
No 442
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.20 E-value=0.14 Score=47.06 Aligned_cols=32 Identities=25% Similarity=0.456 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHhCC------CeEEEEccCC
Q 013952 164 KAVVVGGGYIGLELSAALKINN------IDVSMVYPEP 195 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g------~~V~li~~~~ 195 (433)
.|+|||+|.+|+-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999998764
No 443
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.14 E-value=0.22 Score=38.82 Aligned_cols=77 Identities=17% Similarity=0.234 Sum_probs=50.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 241 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v 241 (433)
.++++|+|.|..|..++..|.+.|.+|+++++. ++..+ .+++.|+.++.+..- +.. .+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~---------~~~~~----~~~~~g~~~i~gd~~-------~~~--~l 64 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETS---------RTRVD----ELRERGVRAVLGNAA-------NEE--IM 64 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESC---------HHHHH----HHHHTTCEEEESCTT-------SHH--HH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC---------HHHHH----HHHHcCCCEEECCCC-------CHH--HH
Confidence 468999999999999999999999999999864 33222 244567776543210 000 00
Q ss_pred EeCCCcEEECCEEEEcccCcc
Q 013952 242 KLKDGRTLEADIVVVGVGGRP 262 (433)
Q Consensus 242 ~~~~g~~i~~d~vi~a~G~~p 262 (433)
. .-+ .-.+|.+|++++...
T Consensus 65 ~-~a~-i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 65 Q-LAH-LECAKWLILTIPNGY 83 (140)
T ss_dssp H-HTT-GGGCSEEEECCSCHH
T ss_pred H-hcC-cccCCEEEEECCChH
Confidence 0 011 125899999998654
No 444
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.05 E-value=0.25 Score=44.96 Aligned_cols=32 Identities=16% Similarity=0.225 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~-~~~~V~lie~~ 40 (433)
.+|.|||+|..|.+.|..|++.|+ + |+++|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~---V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELAD---VVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCE---EEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCe---EEEEECC
Confidence 589999999999999999999886 4 9999887
No 445
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.03 E-value=0.22 Score=45.89 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=30.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|..|+.+|..|+..|.+ |+++|++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~---V~v~D~~ 216 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAK---TTGYDVR 216 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCE---EEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 46899999999999999999999975 9999887
No 446
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=91.02 E-value=0.22 Score=46.75 Aligned_cols=36 Identities=22% Similarity=0.402 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhC-CCeEEEEccCCcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKIN-NIDVSMVYPEPWC 197 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~-g~~V~li~~~~~~ 197 (433)
..+++|||+|..|+-+|..|++. |.+|++++..+++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 35899999999999999999998 9999999877543
No 447
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.00 E-value=0.26 Score=42.83 Aligned_cols=34 Identities=26% Similarity=0.401 Sum_probs=30.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|..|..+|..|++.|. ++++++|.+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv--~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGV--GNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCC--CeEEEEcCC
Confidence 3689999999999999999999995 349999998
No 448
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.99 E-value=0.22 Score=45.13 Aligned_cols=32 Identities=19% Similarity=0.467 Sum_probs=28.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHC---VSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCE---EEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCe---EEEEeCC
Confidence 4899999999999999999998876 9998776
No 449
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=90.78 E-value=0.23 Score=49.02 Aligned_cols=34 Identities=15% Similarity=0.347 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
...|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999998764
No 450
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.75 E-value=0.31 Score=45.02 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=29.9
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++|+|||||..|..+++.+++.|++ ++++|.+
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~---vv~vd~~ 33 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMK---VVLVDKN 33 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 5899999999999999999999998 8999887
No 451
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.75 E-value=0.18 Score=44.41 Aligned_cols=34 Identities=26% Similarity=0.539 Sum_probs=31.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 194 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~ 194 (433)
.+++|+|||+|.+|...+..|.+.|.+|+++.+.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 5789999999999999999999999999999864
No 452
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.74 E-value=0.25 Score=45.53 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=30.2
Q ss_pred CCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 2 m~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|++.++|.|||.|.-|...|..|++.|++ |++++++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~---V~v~dr~ 54 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHE---CVVYDLN 54 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 44567999999999999999999999986 8888877
No 453
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=90.69 E-value=0.22 Score=44.89 Aligned_cols=32 Identities=16% Similarity=0.377 Sum_probs=28.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~---V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGED---VHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCC---EEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCe---EEEEEcC
Confidence 4799999999999999999999876 9988776
No 454
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=90.53 E-value=0.23 Score=45.98 Aligned_cols=33 Identities=24% Similarity=0.315 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
+++|||+|..|+-+|..|++.|.+|++++..+.
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 35 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRNH 35 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 689999999999999999999999999987653
No 455
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.52 E-value=0.34 Score=37.41 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=28.9
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYP 193 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~ 193 (433)
..+++|+|+|.+|..++..|.+.|.+|+++++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 35899999999999999999999999999875
No 456
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.49 E-value=0.28 Score=49.39 Aligned_cols=36 Identities=28% Similarity=0.526 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
..++|+|||+|..|+.+|..|.+.|.+|+++++.++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 367999999999999999999999999999987643
No 457
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.48 E-value=0.21 Score=47.94 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=32.1
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CeEEEEccCCcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINN--IDVSMVYPEPWC 197 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g--~~V~li~~~~~~ 197 (433)
..+|+|||+|.+|+-+|..|.+.| .+|+++++.+.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 358999999999999999999999 999999986553
No 458
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=90.48 E-value=0.31 Score=44.50 Aligned_cols=33 Identities=21% Similarity=0.487 Sum_probs=29.2
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.++|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~---V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEA---INVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCC---EEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCE---EEEEECh
Confidence 45899999999999999999999876 8888765
No 459
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.34 E-value=0.2 Score=45.15 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
.++|.|||+|..|.-+|..++..|.+|++++..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 57899999999999999999999999999987654
No 460
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=90.34 E-value=0.3 Score=50.46 Aligned_cols=35 Identities=26% Similarity=0.510 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
.++|+|||+|..|+.+|..|.+.|.+|++++..++
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~ 312 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 312 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCc
Confidence 46899999999999999999999999999987643
No 461
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.32 E-value=0.17 Score=49.30 Aligned_cols=33 Identities=36% Similarity=0.541 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHh---CCCeEEEEccCC
Q 013952 163 GKAVVVGGGYIGLELSAALKI---NNIDVSMVYPEP 195 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~---~g~~V~li~~~~ 195 (433)
.+|+|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 479999999999999999999 999999998764
No 462
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.30 E-value=0.32 Score=37.78 Aligned_cols=34 Identities=26% Similarity=0.236 Sum_probs=29.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEccC
Q 013952 161 KNGKAVVVGGGYIGLELSAALKINNIDVSMVYPE 194 (433)
Q Consensus 161 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~ 194 (433)
..++++|+|+|.+|..++..|.+.|.+|+++++.
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578999999999999999999999999988753
No 463
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.28 E-value=0.28 Score=44.16 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=28.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++|.|||+|.-|...|..|++.|++ |++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~---V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGND---VTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCc---EEEEECC
Confidence 4799999999999999999998876 8988776
No 464
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.26 E-value=0.21 Score=44.66 Aligned_cols=33 Identities=12% Similarity=0.078 Sum_probs=30.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+.+|.|||.|.-|...|..|++.|++ |++++++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~---V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGG---VTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTC---EEEECSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCe---EEEEeCC
Confidence 46899999999999999999999987 9998877
No 465
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.22 E-value=0.71 Score=41.45 Aligned_cols=74 Identities=24% Similarity=0.298 Sum_probs=0.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcCCeEEEEEecCCCcEEEE
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKGTVAVGFTTNADGEVKEV 241 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~~~v~~i~~~~~g~~~~v 241 (433)
..+++|||+|.+|.-+|..|. .|.+|+++.|.+ .-.+.+++.|+.+...... .. ..+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~-------------~~~~~l~~~G~~~~~~~~~---~~------~~~ 58 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ-------------EQAAAIQSEGIRLYKGGEE---FR------ADC 58 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH-------------HHHHHHHHHCEEEEETTEE---EE------ECC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH-------------HHHHHHHhCCceEecCCCe---ec------ccc
Q ss_pred EeCCCcEEECCEEEEcc
Q 013952 242 KLKDGRTLEADIVVVGV 258 (433)
Q Consensus 242 ~~~~g~~i~~d~vi~a~ 258 (433)
.......-.+|.||+|+
T Consensus 59 ~~~~~~~~~~D~vilav 75 (307)
T 3ego_A 59 SADTSINSDFDLLVVTV 75 (307)
T ss_dssp EEESSCCSCCSEEEECC
T ss_pred cccccccCCCCEEEEEe
No 466
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.18 E-value=0.3 Score=36.42 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=29.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEccC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPE 194 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g-~~V~li~~~ 194 (433)
.++++|+|+|.+|..++..|.+.| .+|+++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999999 888888764
No 467
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.16 E-value=0.26 Score=44.08 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=28.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++|.|||+|.-|.+.|..|++.|.+ |++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~---V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPH---TTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTT---CEEEESS
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCe---EEEEEec
Confidence 4799999999999999999999876 8998877
No 468
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.15 E-value=0.46 Score=42.94 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=0.0
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEccCCccCCCCCCHHHHHHHHHHHHhcCcEEEcC-CeEEEEEecCCCcEEE
Q 013952 163 GKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWCMPRLFTADIAAFYEGYYANKGIKIIKG-TVAVGFTTNADGEVKE 240 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g-~~V~li~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~~-~~v~~i~~~~~g~~~~ 240 (433)
.++.|||.|..|.-+|..|.+.| .+|+++++.+..... .+...+.+.+.|+ .. +....+..
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~------~~~~~~~~~~~g~---~~~s~~e~~~~-------- 87 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAA------SGALRARAAELGV---EPLDDVAGIAC-------- 87 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTT------HHHHHHHHHHTTC---EEESSGGGGGG--------
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccc------hHHHHHHHHHCCC---CCCCHHHHHhc--------
Q ss_pred EEeCCCcEEECCEEEEcccCccChhhhhccccc-CCCcEEeC
Q 013952 241 VKLKDGRTLEADIVVVGVGGRPLISLFKGQVAE-NKGGIETD 281 (433)
Q Consensus 241 v~~~~g~~i~~d~vi~a~G~~p~~~~~~~~~~~-~~g~i~vd 281 (433)
+|.||+|++.....+.+..-... ..+.+.+|
T Consensus 88 ----------aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 88 ----------ADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp ----------CSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred ----------CCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
No 469
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=89.75 E-value=0.43 Score=43.13 Aligned_cols=36 Identities=31% Similarity=0.415 Sum_probs=30.3
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+..+|+|||+|..|.+.|..|+..++ ..++.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~-~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSI-VDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCS-CSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 34699999999999999999998875 3468898866
No 470
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.70 E-value=0.39 Score=42.65 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=30.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|-.|-.+|.+|++.|. ++++|+|.+
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGV--G~i~lvD~D 69 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGI--GKLLLFDYD 69 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTC--SEEEEECCC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCC--CEEEEECCC
Confidence 4689999999999999999999994 569999998
No 471
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.69 E-value=0.45 Score=43.00 Aligned_cols=38 Identities=26% Similarity=0.373 Sum_probs=31.8
Q ss_pred CCCcCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 2 AEKSFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 2 m~~~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
|++..+|.|||+|..|.+.|..|...++ ..++.++|..
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~-~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGI-AEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCC-CCEEEEEeCC
Confidence 4455799999999999999999998876 4568898876
No 472
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=89.57 E-value=0.3 Score=48.08 Aligned_cols=34 Identities=21% Similarity=0.394 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEccCC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNIDVSMVYPEP 195 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~ 195 (433)
.-.|+|||+|..|+-+|..|++.|.+|.++++.+
T Consensus 18 ~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d 51 (561)
T 3da1_A 18 QLDLLVIGGGITGAGIALDAQVRGIQTGLVEMND 51 (561)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3579999999999999999999999999999863
No 473
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.50 E-value=0.34 Score=45.39 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=29.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|.+|+.+|..|+..|.+ |+++|.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~v~D~~ 204 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAI---VRAFDTR 204 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEcCC
Confidence 36899999999999999999998865 9998877
No 474
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=89.48 E-value=0.4 Score=46.21 Aligned_cols=36 Identities=19% Similarity=0.147 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCC-CeEEEEccCCcc
Q 013952 162 NGKAVVVGGGYIGLELSAALKINN-IDVSMVYPEPWC 197 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g-~~V~li~~~~~~ 197 (433)
..+++|||+|..|+-+|..|.+.| .+|+++++.+.+
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 468999999999999999999998 799999887543
No 475
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.46 E-value=0.37 Score=43.57 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=29.4
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++|+|||+|..|...|..|++.|+ ..+|++++.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~-~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGI-AREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEeCC
Confidence 589999999999999999999886 2249999887
No 476
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=89.34 E-value=0.43 Score=44.36 Aligned_cols=33 Identities=24% Similarity=0.366 Sum_probs=30.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.++|.|||+|.-|...+..+++.|++ |+++++.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~---viv~d~~ 44 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYK---VVVLDPS 44 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEECC
Confidence 46899999999999999999999997 8999877
No 477
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.24 E-value=0.42 Score=44.95 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=30.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||.|..|...|..|.+.|.+ |++||.+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~---vvvId~d 36 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVK---MVVLDHD 36 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCC---EEEEECC
Confidence 45799999999999999999999987 9999998
No 478
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=89.22 E-value=0.26 Score=47.13 Aligned_cols=40 Identities=25% Similarity=0.351 Sum_probs=27.1
Q ss_pred CCCCcCeEEEECCCHH-HHHHHHHHHHc--CCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGGGVS-AGYAAREFAKQ--GVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGgG~a-Gl~aA~~l~~~--g~~~~~V~lie~~ 40 (433)
|||++.+|.|||||.. |.+.|..|.+. +++..+|+|+|.+
T Consensus 24 m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~ 66 (472)
T 1u8x_X 24 MKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDND 66 (472)
T ss_dssp --CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSC
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCC
Confidence 5555679999999986 33345567776 5544569999887
No 479
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=89.20 E-value=0.38 Score=46.72 Aligned_cols=33 Identities=24% Similarity=0.216 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEccCCc
Q 013952 164 KAVVVGGGYIGLELSAALKINNIDVSMVYPEPW 196 (433)
Q Consensus 164 ~v~ViG~G~~g~e~a~~l~~~g~~V~li~~~~~ 196 (433)
.|+|||+|..|+-+|..+++.|.+|+++++.+.
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~ 75 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGADVLVLERTSG 75 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 689999999999999999999999999998754
No 480
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.07 E-value=0.5 Score=42.85 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=30.9
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|-.|-.+|..|++.|. ++++++|..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGV--g~ItlvD~D 67 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGV--RKITFVDNG 67 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC--CEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC--CEEEEecCC
Confidence 4689999999999999999999995 459999998
No 481
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.06 E-value=0.59 Score=43.56 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=30.3
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.++|.|||+|..|...+..+++.|++ |.+++..
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~---vi~~d~~ 46 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYK---IAVLDPT 46 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCE---EEEEeCC
Confidence 46899999999999999999999998 8999877
No 482
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.00 E-value=0.33 Score=41.16 Aligned_cols=33 Identities=18% Similarity=0.342 Sum_probs=29.3
Q ss_pred cCeEEEECC-CHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGg-G~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+++|+|.|| |..|...+..|.+.|.+ |+++++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~---V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFE---VTAVVRH 37 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCE---EEEECSC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCE---EEEEEcC
Confidence 468999996 99999999999998876 9999887
No 483
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=88.98 E-value=0.5 Score=45.34 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=30.5
Q ss_pred CcCeEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEcCC
Q 013952 4 KSFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKE 40 (433)
Q Consensus 4 ~~~dvvIIGgG~aGl~aA~~l~~~g~-~~~~V~lie~~ 40 (433)
+.+||+|||||++|+++|..|++.|+ + |+|+|++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~---v~~~e~~ 37 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITD---LLILEAT 37 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCC---EEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCc---eEEEeCC
Confidence 46899999999999999999999987 6 9999998
No 484
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.96 E-value=0.5 Score=41.75 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=29.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
+++|+|.|+|..|...+..|.+.|++ |++++++
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~---V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHE---VTGLRRS 35 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCC---EEEEECT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 35799999999999999999999987 9998877
No 485
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.95 E-value=0.35 Score=42.74 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=28.8
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++|+|.|+|..|...+..|.+.|++ |+++.++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~---V~~~~r~ 37 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWR---IIGTSRN 37 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCE---EEEEESC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCE---EEEEEcC
Confidence 4799999999999999999999876 8888776
No 486
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.91 E-value=0.6 Score=42.05 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=29.5
Q ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEccC
Q 013952 162 NGKAVVVGGGYIGLELSAALKINNI-DVSMVYPE 194 (433)
Q Consensus 162 ~~~v~ViG~G~~g~e~a~~l~~~g~-~V~li~~~ 194 (433)
..+|.|||.|..|.-+|..|.+.|. +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3689999999999999999999999 99998764
No 487
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.85 E-value=0.38 Score=45.97 Aligned_cols=33 Identities=27% Similarity=0.400 Sum_probs=30.5
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.++|+|||+|..|...+..|.+.|.+ |+|++++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~---V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGAR---LTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBE---EEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCE---EEEEcCC
Confidence 46899999999999999999999876 9999987
No 488
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=88.84 E-value=0.22 Score=47.43 Aligned_cols=31 Identities=35% Similarity=0.351 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHhCC-CeEEEEcc
Q 013952 163 GKAVVVGGGYIGLELSAALKINN-IDVSMVYP 193 (433)
Q Consensus 163 ~~v~ViG~G~~g~e~a~~l~~~g-~~V~li~~ 193 (433)
..|+|||+|..|+-+|..|++.| .+|+++++
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 47999999999999999999999 99999998
No 489
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.81 E-value=0.41 Score=44.18 Aligned_cols=32 Identities=38% Similarity=0.438 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+|+|+|+|.+|+.++..|+..|.+ |++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~---V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQ---VQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCE---EEEEeCC
Confidence 6899999999999999999999874 9998877
No 490
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.69 E-value=0.42 Score=44.52 Aligned_cols=33 Identities=15% Similarity=0.190 Sum_probs=29.4
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|.+|+.++..++..|.+ |+++|..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~---V~~~d~~ 204 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAV---VMATDVR 204 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 46899999999999999999998875 8998877
No 491
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=88.56 E-value=0.32 Score=43.85 Aligned_cols=33 Identities=24% Similarity=0.463 Sum_probs=27.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHc-----C-CCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQ-----G-VKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~-----g-~~~~~V~lie~~ 40 (433)
+++|.|||+|.-|...|..|++. | ++ |+++++.
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~---V~~~~r~ 46 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLE---VSWIARG 46 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEE---EEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCC---EEEEEcH
Confidence 35899999999999999999998 7 65 8887653
No 492
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=88.56 E-value=0.5 Score=42.91 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=31.0
Q ss_pred CCCCcCeEEEECC-CHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 1 MAEKSFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 1 Mm~~~~dvvIIGg-G~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
||+..+.|+|.|| |..|...+..|.+.|++ |+++++.
T Consensus 1 ~M~~~~~vlVTGatG~iG~~l~~~L~~~G~~---V~~~~r~ 38 (341)
T 3enk_A 1 SMSTKGTILVTGGAGYIGSHTAVELLAHGYD---VVIADNL 38 (341)
T ss_dssp -CCSSCEEEEETTTSHHHHHHHHHHHHTTCE---EEEECCC
T ss_pred CCCCCcEEEEecCCcHHHHHHHHHHHHCCCc---EEEEecC
Confidence 5666678999995 99999999999999986 8888776
No 493
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.53 E-value=0.42 Score=43.09 Aligned_cols=33 Identities=21% Similarity=0.289 Sum_probs=28.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCC-CCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGV-KPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~-~~~~V~lie~~ 40 (433)
.++|.|||.|.-|...|..|++.|+ + |++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~---V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAID---MAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCE---EEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCe---EEEEcCC
Confidence 4689999999999999999999997 5 8888775
No 494
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.51 E-value=0.67 Score=42.25 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=30.0
Q ss_pred cCeEEEECC-CHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGG-GVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGg-G~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+ |..|.++|..+...|. ..+|+++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~-~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRL-TPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTC-CSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCC-CCEEEEEeCC
Confidence 468999997 9999999999999885 3459999876
No 495
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.42 E-value=0.56 Score=42.34 Aligned_cols=33 Identities=24% Similarity=0.331 Sum_probs=30.0
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|.|||+|.-|.+.|..+++.|++ |+++|.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~---V~l~d~~ 38 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIE 38 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSC
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCE---EEEEeCC
Confidence 36899999999999999999999987 9999888
No 496
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.40 E-value=0.5 Score=42.52 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=28.5
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+|.|||+|..|...|..|+..|+- +|+++|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~--~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELG--DIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCS--EEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCC--eEEEEeCC
Confidence 4799999999999999999998851 29999876
No 497
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.35 E-value=0.46 Score=45.23 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
++|.|||.|.-|+..|..|++.|++ |+++|.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~---V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGAN---VRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCE---EEEEECC
Confidence 4899999999999999999999987 9999887
No 498
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=88.21 E-value=0.58 Score=42.13 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 6 FKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 6 ~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.+|.|||+|.-|..-|..++..|++ |+++|.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~---V~l~D~~ 38 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFR---VKLYDIE 38 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC---EEEECSC
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCe---EEEEECC
Confidence 5899999999999999999999998 9999987
No 499
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=88.19 E-value=0.51 Score=42.28 Aligned_cols=33 Identities=24% Similarity=0.171 Sum_probs=29.8
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
.++|.|||.|.-|...|..|++.|++ |++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~---V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLS---TWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCe---EEEEECC
Confidence 46899999999999999999999986 8888877
No 500
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=88.17 E-value=0.53 Score=40.88 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=30.6
Q ss_pred cCeEEEECCCHHHHHHHHHHHHcCCCCCcEEEEcCC
Q 013952 5 SFKYVILGGGVSAGYAAREFAKQGVKPGELAIISKE 40 (433)
Q Consensus 5 ~~dvvIIGgG~aGl~aA~~l~~~g~~~~~V~lie~~ 40 (433)
..+|+|||+|..|..+|..|++.|.. +++|+|.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg--~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVG--TLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCS--EEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCC--eEEEEeCC
Confidence 46899999999999999999999954 59999998
Done!