Citrus Sinensis ID: 013953

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430---
MAASFPLLQLTSSVNFCSSTFKSSKLNGSVKFSSITCASTNGRESESADNGVKGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSVAC
cccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccHHHHHccccHHHHHHHHHHcccEEEEccccccEEEEccHHHHHHHHHHccccccccHHHHHHHHHcccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccHHHHccc
cccccccEEcccccEcccccccccccccEEEEEEEEEEccccccccccccccccHccHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccHHHccccHHHHHHHHHHHHccccEEEEEccccEEEEEcHHHHHHHHHccccccccccHHHHHHHHHccccEcccccHHHHHHEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHcHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccHHHHHHccccEEEcc
maasfpllqltssvnfcsstfkssklngsvkFSSITcastngresesadngvkgveqLPEKKRRAELSARIAsgeltversgfpsrlrnglsklgiPHDILEALFNwtganegypkipeakgAVNAIRSEAFFLPLYELYLTYggifrltfgpksflivsdpsmakhilkdnskgysKGILAEILEFVmgkglipadgeIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGkavfnydfdsltndtgIVEAVYTVLREaedrsvapipvweipiwkdisPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEeymneqdpSILHFLLAsgddvsskQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSVAC
MAASFPLLQLTSSVNFCSSTfkssklngsvkFSSITCAstngresesadngvkgveqlpekkrraelsariasgeltversgfpsRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTaasegedaeMESLFSRLTLDVIGKAVFNydfdsltndtGIVEAVYTVLreaedrsvapipvweipiwkdispRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSVAC
MAASFPLLQLTSSVNFCSSTFKSSKLNGSVKFSSITCASTNGRESESADNGVKGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSVAC
*************VNFC***********************************************************************NGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDT***********SLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSV**
****F***QLTSSVNFCS***************************************************************GFPSRLRNGLSKLGIPHDILEALFNWTG**EGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAI**********************SILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSVAC
MAASFPLLQLTSSVNFCSSTFKSSKLNGSVKFSSITCA**************KGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSVAC
****FPLLQLTSSVNFCSSTFKSSKLNGSVKFSSITCAST***************EQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSVAC
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAASFPLLQLTSSVNFCSSTFKSSKLNGSVKFSSITCASTNGRESESADNGVKGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFIILHRYKSHFHFITSVAC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query433 2.2.26 [Sep-21-2011]
Q93VK5 595 Protein LUTEIN DEFICIENT yes no 0.819 0.596 0.816 1e-169
Q6TBX7 539 Carotene epsilon-monooxyg no no 0.618 0.497 0.523 1e-77
O23365 580 Cytochrome P450 97B3, chl no no 0.651 0.486 0.477 6e-73
Q43078 552 Cytochrome P450 97B1, chl N/A no 0.667 0.523 0.475 1e-71
O48921 576 Cytochrome P450 97B2, chl no no 0.651 0.489 0.476 3e-71
Q9VXY0 495 Probable cytochrome P450 yes no 0.591 0.517 0.262 9e-16
O81117 514 Cytochrome P450 94A1 OS=V N/A no 0.540 0.455 0.247 7e-15
Q9FMY1 559 Cytochrome P450 86B1 OS=A no no 0.545 0.422 0.272 8e-15
P29981 511 Cytochrome P450 4C1 OS=Bl N/A no 0.572 0.485 0.238 2e-14
Q50EK3 518 Cytochrome P450 704C1 OS= N/A no 0.558 0.467 0.263 2e-14
>sp|Q93VK5|LUT5_ARATH Protein LUTEIN DEFICIENT 5, chloroplastic OS=Arabidopsis thaliana GN=CYP97A3 PE=1 SV=1 Back     alignment and function desciption
 Score =  596 bits (1536), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 290/355 (81%), Positives = 330/355 (92%)

Query: 44  ESESADNGVKGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEA 103
           E  S  NGVK +E+L E+KRRAELSARIASG  TV +S FPS ++NGLSK+GIP ++L+ 
Sbjct: 40  EENSVPNGVKSLEKLQEEKRRAELSARIASGAFTVRKSSFPSTVKNGLSKIGIPSNVLDF 99

Query: 104 LFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPS 163
           +F+WTG+++ YPK+PEAKG++ A+R+EAFF+PLYEL+LTYGGIFRLTFGPKSFLIVSDPS
Sbjct: 100 MFDWTGSDQDYPKVPEAKGSIQAVRNEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPS 159

Query: 164 MAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDL 223
           +AKHILKDN+K YSKGILAEIL+FVMGKGLIPADGEIWR RRRAIVPALHQKYVAAMI L
Sbjct: 160 IAKHILKDNAKAYSKGILAEILDFVMGKGLIPADGEIWRRRRRAIVPALHQKYVAAMISL 219

Query: 224 FGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYT 283
           FG+A+DRLC+KLD AA +GE+ EMESLFSRLTLD+IGKAVFNYDFDSLTNDTG++EAVYT
Sbjct: 220 FGEASDRLCQKLDAAALKGEEVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGVIEAVYT 279

Query: 284 VLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQF 343
           VLREAEDRSV+PIPVW+IPIWKDISPR +KV  +LKLINDTLDDLIA CKRMV+EEELQF
Sbjct: 280 VLREAEDRSVSPIPVWDIPIWKDISPRQRKVATSLKLINDTLDDLIATCKRMVEEEELQF 339

Query: 344 HEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS 398
           HEEYMNE+DPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL+
Sbjct: 340 HEEYMNERDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLT 394
Heme-containing cytochrome P450 involved in the biosynthesis of xanthophylls. Specific for beta-ring hydroxylation of alpha- and beta-carotene. Has also a low activity toward the epsilon-rings of alpha-carotene. The beta-ring of alpha-carotene is the preferred substrate in planta.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|Q6TBX7|LUT1_ARATH Carotene epsilon-monooxygenase, chloroplastic OS=Arabidopsis thaliana GN=CYP97C1 PE=1 SV=1 Back     alignment and function description
>sp|O23365|C97B3_ARATH Cytochrome P450 97B3, chloroplastic OS=Arabidopsis thaliana GN=CYP97B3 PE=1 SV=2 Back     alignment and function description
>sp|Q43078|C97B1_PEA Cytochrome P450 97B1, chloroplastic OS=Pisum sativum GN=CYP97B1 PE=2 SV=1 Back     alignment and function description
>sp|O48921|C97B2_SOYBN Cytochrome P450 97B2, chloroplastic OS=Glycine max GN=CYP97B2 PE=2 SV=1 Back     alignment and function description
>sp|Q9VXY0|CP4S3_DROME Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=3 SV=1 Back     alignment and function description
>sp|O81117|C94A1_VICSA Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2 Back     alignment and function description
>sp|Q9FMY1|C86B1_ARATH Cytochrome P450 86B1 OS=Arabidopsis thaliana GN=CYP86B1 PE=2 SV=1 Back     alignment and function description
>sp|P29981|CP4C1_BLADI Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP4C1 PE=2 SV=1 Back     alignment and function description
>sp|Q50EK3|C04C1_PINTA Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query433
255543092 632 cytochrome P450, putative [Ricinus commu 0.921 0.631 0.789 0.0
350537695 605 cytochrome P450-type monooxygenase 97A29 0.914 0.654 0.812 0.0
224128836464 cytochrome P450 [Populus trichocarpa] gi 0.875 0.816 0.842 0.0
449431930 624 PREDICTED: protein LUTEIN DEFICIENT 5, c 0.893 0.620 0.802 0.0
449526543 624 PREDICTED: LOW QUALITY PROTEIN: protein 0.893 0.620 0.799 1e-180
356568463 641 PREDICTED: protein LUTEIN DEFICIENT 5, c 0.845 0.570 0.826 1e-176
356531926 633 PREDICTED: protein LUTEIN DEFICIENT 5, c 0.896 0.612 0.784 1e-173
357507659 636 Cytochrome P450 [Medicago truncatula] gi 0.891 0.606 0.765 1e-173
359476796 638 PREDICTED: protein LUTEIN DEFICIENT 5, c 0.842 0.572 0.832 1e-172
18398119 595 cytochrome P450, family 97, subfamily A, 0.819 0.596 0.816 1e-168
>gi|255543092|ref|XP_002512609.1| cytochrome P450, putative [Ricinus communis] gi|223548570|gb|EEF50061.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  669 bits (1725), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/418 (78%), Positives = 363/418 (86%), Gaps = 19/418 (4%)

Query: 1   MAASFPLLQLTSSV-------------------NFCSSTFKSSKLNGSVKFSSITCASTN 41
           MAA+F LLQ+ SS+                   N  S     + + G  KF+ I+CAS+ 
Sbjct: 1   MAANFALLQVPSSISAKHHCLQTKFQVRRVKPINLSSFPPTQNGVLGKRKFAVISCASSK 60

Query: 42  GRESESADNGVKGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDIL 101
           GRE ES ++ VK VE++ E+KRRAELSA+IASGE TV++SGFPS LRNGLSKLG+P++ L
Sbjct: 61  GREPESEEDPVKSVERILEEKRRAELSAKIASGEFTVQQSGFPSILRNGLSKLGVPNETL 120

Query: 102 EALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSD 161
           E LF W  A EGYPKIPEAKGA++AIRSEAFF+PLYELYLTYGGIFRLTFGPKSFLIVSD
Sbjct: 121 EFLFKWVDAGEGYPKIPEAKGAISAIRSEAFFIPLYELYLTYGGIFRLTFGPKSFLIVSD 180

Query: 162 PSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMI 221
           PS+AKHIL+DNSK YSKGILAEIL+FVMGKGLIPADGEIWRVRRRAIVPA HQKYVAAMI
Sbjct: 181 PSIAKHILRDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPAFHQKYVAAMI 240

Query: 222 DLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAV 281
            LFG+ATDRLCKKLD AAS+GED EMESLFSRLTLD+IGKAVFNY+FDSL NDTGIVEAV
Sbjct: 241 GLFGQATDRLCKKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYEFDSLANDTGIVEAV 300

Query: 282 YTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEEL 341
           YTVLREAEDRSVAPIPVWEIPIWKDISPR +KV+AALKLIND LDDLIA+CKRMVDEEEL
Sbjct: 301 YTVLREAEDRSVAPIPVWEIPIWKDISPRQRKVSAALKLINDILDDLIALCKRMVDEEEL 360

Query: 342 QFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK 399
           QFH+EYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK
Sbjct: 361 QFHDEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK 418

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|350537695|ref|NP_001234049.1| cytochrome P450-type monooxygenase 97A29 [Solanum lycopersicum] gi|212421921|gb|ACJ25969.1| cytochrome P450-type monooxygenase 97A29 [Solanum lycopersicum] gi|215398067|gb|ACJ65304.1| cytochrome P450-type monooxygenase 97A29 [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|224128836|ref|XP_002328979.1| cytochrome P450 [Populus trichocarpa] gi|222839213|gb|EEE77564.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449431930|ref|XP_004133753.1| PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449526543|ref|XP_004170273.1| PREDICTED: LOW QUALITY PROTEIN: protein LUTEIN DEFICIENT 5, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356568463|ref|XP_003552430.1| PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356531926|ref|XP_003534527.1| PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|357507659|ref|XP_003624118.1| Cytochrome P450 [Medicago truncatula] gi|87162770|gb|ABD28565.1| E-class P450, group I [Medicago truncatula] gi|355499133|gb|AES80336.1| Cytochrome P450 [Medicago truncatula] Back     alignment and taxonomy information
>gi|359476796|ref|XP_002279984.2| PREDICTED: protein LUTEIN DEFICIENT 5, chloroplastic-like [Vitis vinifera] gi|297735311|emb|CBI17673.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18398119|ref|NP_564384.1| cytochrome P450, family 97, subfamily A, polypeptide 3 [Arabidopsis thaliana] gi|75305716|sp|Q93VK5.1|LUT5_ARATH RecName: Full=Protein LUTEIN DEFICIENT 5, chloroplastic; AltName: Full=Cytochrome P450 97A3; Flags: Precursor gi|15912337|gb|AAL08302.1| At1g31800/68069_m00159 [Arabidopsis thaliana] gi|16648793|gb|AAL25587.1| At1g31800/68069_m00159 [Arabidopsis thaliana] gi|22655378|gb|AAM98281.1| At1g31800/68069_m00159 [Arabidopsis thaliana] gi|332193273|gb|AEE31394.1| cytochrome P450, family 97, subfamily A, polypeptide 3 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query433
TAIR|locus:2034476 595 CYP97A3 ""cytochrome P450, fam 0.903 0.657 0.763 2.5e-161
TAIR|locus:2102023 539 LUT1 "LUTEIN DEFICIENT 1" [Ara 0.669 0.538 0.505 7.5e-73
TAIR|locus:2129695 580 CYP97B3 ""cytochrome P450, fam 0.651 0.486 0.481 2.1e-68
TAIR|locus:2167371 510 CYP94B1 ""cytochrome P450, fam 0.547 0.464 0.260 1.7e-16
ASPGD|ASPL0000047899 549 CYP547C1 [Emericella nidulans 0.542 0.428 0.303 1.7e-15
TAIR|locus:2052526 510 CYP96A5 ""cytochrome P450, fam 0.558 0.474 0.284 2.4e-15
FB|FBgn0030615 495 Cyp4s3 "Cyp4s3" [Drosophila me 0.591 0.517 0.262 2.8e-15
TAIR|locus:2166786 559 CYP86B1 ""cytochrome P450, fam 0.561 0.434 0.268 3.7e-15
UNIPROTKB|E1BYW5 530 CYP4V2 "Uncharacterized protei 0.556 0.454 0.269 7.3e-15
TAIR|locus:2058558 516 CYP96A1 ""cytochrome P450, fam 0.549 0.461 0.285 9.2e-14
TAIR|locus:2034476 CYP97A3 ""cytochrome P450, family 97, subfamily A, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1571 (558.1 bits), Expect = 2.5e-161, P = 2.5e-161
 Identities = 306/401 (76%), Positives = 353/401 (88%)

Query:     1 MAASFPLLQLTSSVNFCSSTFKSSKLNGSVKFSSITCASTNGR---ESESADNGVKGVEQ 57
             MA +FPL   T ++     T+  S+ +  V FSS    S+NGR   E  S  NGVK +E+
Sbjct:     1 MAMAFPL-SYTPTITVKPVTY--SRRSNFVVFSS----SSNGRDPLEENSVPNGVKSLEK 53

Query:    58 LPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKI 117
             L E+KRRAELSARIASG  TV +S FPS ++NGLSK+GIP ++L+ +F+WTG+++ YPK+
Sbjct:    54 LQEEKRRAELSARIASGAFTVRKSSFPSTVKNGLSKIGIPSNVLDFMFDWTGSDQDYPKV 113

Query:   118 PEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS 177
             PEAKG++ A+R+EAFF+PLYEL+LTYGGIFRLTFGPKSFLIVSDPS+AKHILKDN+K YS
Sbjct:   114 PEAKGSIQAVRNEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILKDNAKAYS 173

Query:   178 KGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDT 237
             KGILAEIL+FVMGKGLIPADGEIWR RRRAIVPALHQKYVAAMI LFG+A+DRLC+KLD 
Sbjct:   174 KGILAEILDFVMGKGLIPADGEIWRRRRRAIVPALHQKYVAAMISLFGEASDRLCQKLDA 233

Query:   238 AASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIP 297
             AA +GE+ EMESLFSRLTLD+IGKAVFNYDFDSLTNDTG++EAVYTVLREAEDRSV+PIP
Sbjct:   234 AALKGEEVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGVIEAVYTVLREAEDRSVSPIP 293

Query:   298 VWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILH 357
             VW+IPIWKDISPR +KV  +LKLINDTLDDLIA CKRMV+EEELQFHEEYMNE+DPSILH
Sbjct:   294 VWDIPIWKDISPRQRKVATSLKLINDTLDDLIATCKRMVEEEELQFHEEYMNERDPSILH 353

Query:   358 FLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS 398
             FLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLL+
Sbjct:   354 FLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLT 394
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010291 "carotene beta-ring hydroxylase activity" evidence=IMP
GO:0016117 "carotenoid biosynthetic process" evidence=RCA;IMP
GO:0016123 "xanthophyll biosynthetic process" evidence=IGI
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0000023 "maltose metabolic process" evidence=RCA
GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA
GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA
GO:0015995 "chlorophyll biosynthetic process" evidence=RCA
GO:0019252 "starch biosynthetic process" evidence=RCA
GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA
GO:0043085 "positive regulation of catalytic activity" evidence=RCA
TAIR|locus:2102023 LUT1 "LUTEIN DEFICIENT 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129695 CYP97B3 ""cytochrome P450, family 97, subfamily B, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2167371 CYP94B1 ""cytochrome P450, family 94, subfamily B, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000047899 CYP547C1 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
TAIR|locus:2052526 CYP96A5 ""cytochrome P450, family 96, subfamily A, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
FB|FBgn0030615 Cyp4s3 "Cyp4s3" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
TAIR|locus:2166786 CYP86B1 ""cytochrome P450, family 86, subfamily B, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|E1BYW5 CYP4V2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
TAIR|locus:2058558 CYP96A1 ""cytochrome P450, family 96, subfamily A, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93VK5LUT5_ARATH1, ., 1, 4, ., -, ., -0.81690.81980.5966yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query433
PLN02738 633 PLN02738, PLN02738, carotene beta-ring hydroxylase 0.0
PLN02936 489 PLN02936, PLN02936, epsilon-ring hydroxylase 1e-113
pfam00067 461 pfam00067, p450, Cytochrome P450 6e-35
COG2124 411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 1e-21
PLN03195 516 PLN03195, PLN03195, fatty acid omega-hydroxylase; 1e-15
PLN02169 500 PLN02169, PLN02169, fatty acid (omega-1)-hydroxyla 6e-14
PLN02426 502 PLN02426, PLN02426, cytochrome P450, family 94, su 2e-11
PLN02290 516 PLN02290, PLN02290, cytokinin trans-hydroxylase 1e-08
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 6e-07
PLN02987 472 PLN02987, PLN02987, Cytochrome P450, family 90, su 5e-04
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information 
 Score =  722 bits (1865), Expect = 0.0
 Identities = 318/420 (75%), Positives = 351/420 (83%), Gaps = 21/420 (5%)

Query: 1   MAASFPLLQLTSSVNF---CSSTFKSSKLNGSVKFSS----------------ITCASTN 41
           MA +FPL     S       SS    +     +                    + CAS+N
Sbjct: 1   MAMNFPLSATPISAFAMAATSSAAAQAPRPCRLHLRLLPPAKPAAASRRRRLVLRCASSN 60

Query: 42  GRE--SESADNGVKGVEQLPEKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHD 99
           GR    ES ++GVK VE+L E+KRRAELSARIASGE TV++ GFP+ LRNGL+KLG P +
Sbjct: 61  GRGPGGESVEDGVKSVERLREEKRRAELSARIASGEFTVQKPGFPATLRNGLAKLGPPGE 120

Query: 100 ILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIV 159
           +L  LF W  A EGYPKIPEAKG+++A+R EAFF+PLYEL+LTYGGIFRLTFGPKSFLIV
Sbjct: 121 LLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIV 180

Query: 160 SDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAA 219
           SDPS+AKHIL+DNSK YSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAA
Sbjct: 181 SDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAA 240

Query: 220 MIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVE 279
           MI LFG+A+DRLC+KLD AAS+GED EMESLFSRLTLD+IGKAVFNYDFDSL+NDTGIVE
Sbjct: 241 MISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVE 300

Query: 280 AVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEE 339
           AVYTVLREAEDRSV+PIPVWEIPIWKDISPR +KV  ALKLINDTLDDLIAICKRMV+EE
Sbjct: 301 AVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEE 360

Query: 340 ELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK 399
           ELQFHEEYMNE+DPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK
Sbjct: 361 ELQFHEEYMNERDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK 420

Length = 633
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 433
PLN02738 633 carotene beta-ring hydroxylase 100.0
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
PLN02290 516 cytokinin trans-hydroxylase 100.0
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
PTZ00404 482 cytochrome P450; Provisional 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PLN02936 489 epsilon-ring hydroxylase 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
PLN02655 466 ent-kaurene oxidase 100.0
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 100.0
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN02183 516 ferulate 5-hydroxylase 100.0
PLN02966 502 cytochrome P450 83A1 100.0
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 100.0
PLN03112 514 cytochrome P450 family protein; Provisional 100.0
PLN03195 516 fatty acid omega-hydroxylase; Provisional 100.0
PLN02394 503 trans-cinnamate 4-monooxygenase 100.0
PLN02500 490 cytochrome P450 90B1 100.0
PLN02196 463 abscisic acid 8'-hydroxylase 100.0
PLN00168 519 Cytochrome P450; Provisional 100.0
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 100.0
PLN03018 534 homomethionine N-hydroxylase 100.0
PLN02774 463 brassinosteroid-6-oxidase 100.0
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN02302 490 ent-kaurenoic acid oxidase 100.0
PLN02987 472 Cytochrome P450, family 90, subfamily A 100.0
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.98
PLN02648 480 allene oxide synthase 99.94
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.94
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.92
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information 
Probab=100.00  E-value=1.1e-62  Score=502.01  Aligned_cols=416  Identities=76%  Similarity=1.169  Sum_probs=347.4

Q ss_pred             CCCCCCccccCCccccccccccccc-------------------ccCccceeEEEeeccCCCCC--CcccCCccccccch
Q 013953            1 MAASFPLLQLTSSVNFCSSTFKSSK-------------------LNGSVKFSSITCASTNGRES--ESADNGVKGVEQLP   59 (433)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~   59 (433)
                      ||+|+++.+.|+..+.+..|.....                   .....++.|++|++|+||+|  .+.++++|++++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (633)
T PLN02738          1 MAMNFPLSATPISAFAMAATSSAAAQAPRPCRLHLRLLPPAKPAAASRRRRLVLRCASSNGRGPGGESVEDGVKSVERLR   80 (633)
T ss_pred             CCcccccccCchHHHHHhhhhhcccccccccccccccCCCCCccchhhcccEEEEeeccCCCCCCccccccchhHHHHHH
Confidence            8999999999977664444332221                   11245668999999999999  48999999999999


Q ss_pred             HHHHhHhHhhhhhccccccccCCccHHHHHhhhhCCCCCCchhhhhhhcCCCCCCCCccccccchhhhccccccHHHHHH
Q 013953           60 EKKRRAELSARIASGELTVERSGFPSRLRNGLSKLGIPHDILEALFNWTGANEGYPKIPEAKGAVNAIRSEAFFLPLYEL  139 (433)
Q Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iPgP~~~~~~g~~~~~~~~p~~~p~lG~l~~~~~~~~~~~~~~~  139 (433)
                      ++++|++|+++||||||++++++++..+++.|+++|||||+++++++|+++|..+|.+|..+||+..+..+.++..+.+|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~l  160 (633)
T PLN02738         81 EEKRRAELSARIASGEFTVQKPGFPATLRNGLAKLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYEL  160 (633)
T ss_pred             HHHHHHHHhhhhhccceeecCCCchHHHHhhhhhCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999888899999999


Q ss_pred             HHHhCCcEEEEeCCceEEEEcCHHHHHHHHhhCCCCCCchhHHHHHHHhhcCcccccCCchHHHhHhhhcccCcHHHHHH
Q 013953          140 YLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAA  219 (433)
Q Consensus       140 ~~~yG~i~~i~~g~~~~vvv~dpe~ik~il~~~~~~~~~~~~~~~~~~~~g~~l~~~~g~~w~~~Rr~l~~~f~~~~l~~  219 (433)
                      |++|||||++++|++++|+|+||+.+++||.++...|.++..+.......+.++++.+|+.|+.+|+++++.|+..+++.
T Consensus       161 h~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g~~l~~~dge~wr~rRr~l~p~Fs~~~v~~  240 (633)
T PLN02738        161 FLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAA  240 (633)
T ss_pred             HHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccCCceecCCcHHHHHHHHhccHhhhHHHHHH
Confidence            99999999999999999999999999999987777788876655555556788888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHhHHhcccccCCCCCChhHHHHHHHHHHHHHhcccCCcccc
Q 013953          220 MIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVW  299 (433)
Q Consensus       220 ~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (433)
                      +++.+.+.++.++++|.+....++++|+.+.++.+++|||+.++||.+++.+.+++++.+.+...+..........++.|
T Consensus       241 l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  320 (633)
T PLN02738        241 MISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVSPIPVW  320 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHHHHHHHHHHHHHHhhcchhhh
Confidence            99999999999999998765567899999999999999999999999988655555666666666554433333344445


Q ss_pred             ccchhcccChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhhhhcccCCCcHHHHHHhCCCCCCHHHHHHHHHHHh
Q 013953          300 EIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTML  379 (433)
Q Consensus       300 ~~p~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~dll~~ll~~~~~lt~~ei~~~~~~ll  379 (433)
                      .+|+++.+++..++..+..+.+.+++..+++.+++...+..........+..+.|+++.|++.+++++++++.+++++++
T Consensus       321 ~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~~~ls~~~L~~e~~~ll  400 (633)
T PLN02738        321 EIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASGDDVSSKQLRDDLMTML  400 (633)
T ss_pred             hhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence            66666666555555666667777777777776655433221111111112335689999998877799999999999999


Q ss_pred             hccchhHHHHHHHHHHHHhhChHHHHHHHHHHHhhcc
Q 013953          380 IAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFI  416 (433)
Q Consensus       380 ~AG~dTTa~tL~~~l~~La~~Pevq~kLr~EI~~~~~  416 (433)
                      +||+|||+++|+|++|+|++||++|+|||+||+++++
T Consensus       401 ~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~  437 (633)
T PLN02738        401 IAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG  437 (633)
T ss_pred             hcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999875

>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query433
3qi8_B 472 Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) 5e-11
2uwh_A 458 Cytochrome P450 Bm3 Mutant In Complex With Palmitic 6e-11
1zo4_A 473 Crystal Structure Of A328s Mutant Of The Heme Domai 7e-11
2hpd_A 471 Crystal Structure Of Hemoprotein Domain Of P450bm-3 7e-11
2nnb_A 471 The Q403k Mutnat Heme Domain Of Flavocytochrome P45 7e-11
2ij2_A 470 Atomic Structure Of The Heme Domain Of Flavocytochr 7e-11
1bvy_A 458 Complex Of The Heme And Fmn-Binding Domains Of The 7e-11
3kx4_A 470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 8e-11
3ben_A 470 Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine 8e-11
1jpz_A 473 Crystal Structure Of A Complex Of The Heme Domain O 8e-11
3m4v_A 482 Crystal Structure Of The A330p Mutant Of Cytochrome 8e-11
1zoa_A 473 Crystal Structure Of A328v Mutant Of The Heme Domai 8e-11
3hf2_A 482 Crystal Structure Of The I401p Mutant Of Cytochrome 9e-11
3psx_A 487 Crystal Structure Of The Kt2 Mutant Of Cytochrome P 9e-11
1jme_A 455 Crystal Structure Of Phe393his Cytochrome P450 Bm3 9e-11
2bmh_A 455 Modeling Protein-Substrate Interactions In The Heme 9e-11
3kx3_A 470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 1e-10
1p0v_A 455 F393a Mutant Heme Domain Of Flavocytochrome P450 Bm 1e-10
1p0x_A 455 F393y Mutant Heme Domain Of Flavocytochrome P450 Bm 1e-10
1p0w_A 455 F393w Mutant Heme Domain Of Flavocytochrome P450 Bm 1e-10
4dud_A 471 Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Le 1e-10
4duf_A 471 Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Seroto 1e-10
2x7y_A 455 P450 Bm3 F87a In Complex With Dmso Length = 455 1e-10
4duc_A 472 Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Leng 1e-10
3kx5_A 470 Crystal Structure Of Bacillus Megaterium Bm3 Heme D 1e-10
3dbg_A 467 Crystal Structure Of Cytochrome P450 170a1 (Cyp170a 2e-10
3ekf_A 470 Crystal Structure Of The A264q Heme Domain Of Cytoc 3e-10
2ij4_A 470 Structure Of The A264k Mutant Of Cytochrome P450 Bm 3e-10
3ekb_A 470 Crystal Structure Of The A264c Mutant Heme Domain O 3e-10
1fah_A 471 Structure Of Cytochrome P450 Length = 471 3e-10
3npl_A 470 Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme D 3e-10
1smi_A 471 A Single Mutation Of P450 Bm3 Induces The Conformat 3e-10
1yqp_A 455 T268n Mutant Cytochrome Domain Of Flavocytochrome P 3e-10
3ekd_A 470 Crystal Structure Of The A264m Heme Domain Of Cytoc 3e-10
2ij3_A 470 Structure Of The A264h Mutant Of Cytochrome P450 Bm 3e-10
1yqo_A 455 T268a Mutant Heme Domain Of Flavocytochrome P450 Bm 4e-10
3dgi_A 461 Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Le 5e-10
4dua_A 471 Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Leng 1e-09
4dub_A 472 Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopami 1e-09
4dtw_B 469 Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Seroto 3e-09
4du2_B 470 Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamin 3e-09
3cbd_A 455 Directed Evolution Of Cytochrome P450 Bm3, To Octan 4e-09
2q9f_A 456 Crystal Structure Of Human Cytochrome P450 46a1 In 2e-08
1w0e_A 485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 2e-06
1tqn_A 486 Crystal Structure Of Human Microsomal P450 3a4 Leng 2e-06
3ua1_A 487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 2e-06
3ibd_A 476 Crystal Structure Of A Cytochrome P450 2b6 Genetic 3e-06
3eqm_A 503 Crystal Structure Of Human Placental Aromatase Cyto 4e-05
3ruk_A 494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 8e-05
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1) Length = 472 Back     alignment and structure 
Iteration: 1

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 32/209 (15%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
           W+  R  ++P L Q+    Y A M+D+      +L +K +   S+ E  E+    +RLTL
Sbjct: 97  WKKARNILLPRLSQQAMKGYHAMMVDI----AVQLVQKWERLNSD-EHIEVPEDMTRLTL 151
Query: 257 DVIGKAVFNYDFDSLTND------TGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPR 310
           D IG   FNY  +S   D      T +V A+  V+ + + R+    P ++          
Sbjct: 152 DTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQ-RANPDDPAYD--------EN 202
Query: 311 LKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQ 370
            ++    +K++ND +D +IA  ++   E+        ++ +DP        +G+ +  + 
Sbjct: 203 KRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLHGKDPE-------TGEPLDDEN 254
Query: 371 LRDDLMTMLIAGHETSAAVLTWTFYLLSK 399
           +R  ++T LIAGHET++ +LT+  Y L K
Sbjct: 255 IRYQIITFLIAGHETTSGLLTFALYFLVK 283
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid Length = 458 Back     alignment and structure
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of P450bm-3 Length = 473 Back     alignment and structure
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A Prototype For Microsomal P450's Length = 471 Back     alignment and structure
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3 Length = 471 Back     alignment and structure
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome P450- Bm3 Length = 470 Back     alignment and structure
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The Cytochrome P450(Bm-3) Length = 458 Back     alignment and structure
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine Inhibitor Bound To The Heme Domain Of Cytochrome P450-Bm3 Length = 470 Back     alignment and structure
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of P450bm- 3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of P450bm-3 With N-Palmitoylglycine Length = 473 Back     alignment and structure
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450 Bm3 Length = 482 Back     alignment and structure
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3 Length = 487 Back     alignment and structure
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain Of Cytochrome P450bm-3 Length = 455 Back     alignment and structure
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin Length = 471 Back     alignment and structure
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso Length = 455 Back     alignment and structure
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand Length = 472 Back     alignment and structure
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain Mut Length = 470 Back     alignment and structure
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From Streptomyces Coelicolor Length = 467 Back     alignment and structure
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450 Length = 471 Back     alignment and structure
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain, A Ruthenium Modified P450 Bm3 Mutant Length = 470 Back     alignment and structure
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational Rearrangement Seen Upon Substrate-Binding In Wild-Type Enzyme Length = 471 Back     alignment and structure
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3 Length = 470 Back     alignment and structure
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3 Length = 455 Back     alignment and structure
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3 Length = 461 Back     alignment and structure
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand Length = 471 Back     alignment and structure
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine Length = 472 Back     alignment and structure
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin Length = 469 Back     alignment and structure
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine Length = 470 Back     alignment and structure
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane Monoxygenase 139-3 Length = 455 Back     alignment and structure
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex With Cholesterol-3-Sulphate Length = 456 Back     alignment and structure
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant In Complex With The Inhibitor 4-(4-Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome P450 In Complex With Androstenedione Length = 503 Back     alignment and structure
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query433
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 5e-76
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 4e-65
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 1e-61
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 1e-54
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 2e-50
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 1e-44
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 1e-44
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 8e-42
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 6e-40
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 3e-37
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 2e-33
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 6e-32
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 9e-30
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 1e-24
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 1e-24
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 5e-20
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 1e-15
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 2e-14
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 1e-09
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 4e-09
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 4e-09
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 1e-08
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 1e-08
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 2e-08
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 2e-08
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 5e-08
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 5e-08
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 7e-07
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
 Score =  243 bits (623), Expect = 5e-76
 Identities = 59/293 (20%), Positives = 121/293 (41%), Gaps = 23/293 (7%)

Query: 116 KIPEAK-----GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILK 170
           ++P+ K       +  + ++     L ++    G IF+     +    +S   + K    
Sbjct: 4   EMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACD 63

Query: 171 DNSKGYSKGILAEILEFVMGKGLIPA--DGEIWRVRRRAIVPALHQKYVAAMIDLFGKAT 228
           ++    +     + +    G GL  +    + W+     ++P+  Q+ +     +     
Sbjct: 64  ESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIA 123

Query: 229 DRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLR 286
            +L +K +   ++    E+    +RLTLD IG   FNY F+S   D     + ++   L 
Sbjct: 124 VQLVQKWERLNADEH-IEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALD 182

Query: 287 EAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEE 346
           EA ++     P              ++    +K++ND +D +IA  K    E+       
Sbjct: 183 EAMNKLQRANPDDPAY-----DENKRQFQEDIKVMNDLVDKIIADRKAS-GEQSDDLLTH 236

Query: 347 YMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSK 399
            +N +DP        +G+ +  + +R  ++T LIAGHET++ +L++  Y L K
Sbjct: 237 MLNGKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVK 282
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query433
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 100.0
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 100.0
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.97
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.97
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.97
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.97
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.97
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.97
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.97
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.97
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.97
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.97
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.97
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.97
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.97
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.96
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.96
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.96
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.96
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.96
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.96
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.96
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.96
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.96
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.96
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.96
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.96
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.96
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.96
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.96
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.96
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.96
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.96
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.96
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.96
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.96
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.95
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.95
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.95
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.95
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.95
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.95
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.95
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.95
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.95
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.94
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.94
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.94
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.94
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.94
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.93
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.93
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.89
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.87
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 99.51
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=100.00  E-value=7.6e-39  Score=321.72  Aligned_cols=297  Identities=19%  Similarity=0.261  Sum_probs=229.3

Q ss_pred             CCCccccccchhhhcc-ccccHHHHHHHHHhCCcEEEEeCCceEEEEcCHHHHHHHHhhCCCCCCchhHHHHHHHhh--c
Q 013953          114 YPKIPEAKGAVNAIRS-EAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVM--G  190 (433)
Q Consensus       114 ~p~~~p~lG~l~~~~~-~~~~~~~~~~~~~yG~i~~i~~g~~~~vvv~dpe~ik~il~~~~~~~~~~~~~~~~~~~~--g  190 (433)
                      +|+..|++||+.++.. +.++..+.+|+++|||||++++|+.++|+|+||+++++|+.+++..|.+++.........  +
T Consensus        12 gP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~~~~~~~   91 (494)
T 3swz_A           12 SLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNR   91 (494)
T ss_dssp             CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHHHHTTTT
T ss_pred             CCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHHhccCC
Confidence            7778899999998854 357888999999999999999999999999999999999998888888876544444332  4


Q ss_pred             CcccccC-CchHHHhHhhhcccCcH--HHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHhHHhcccc
Q 013953          191 KGLIPAD-GEIWRVRRRAIVPALHQ--KYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYD  267 (433)
Q Consensus       191 ~~l~~~~-g~~w~~~Rr~l~~~f~~--~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~  267 (433)
                      .|+++.+ |+.|+.+||++.+.|+.  ..+..+.+.+.++++.+++.|.+.  .++++|+.+.+..+++|+|+.++||.+
T Consensus        92 ~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~vd~~~~~~~~t~dvi~~~~fG~~  169 (494)
T 3swz_A           92 KGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATH--NGQSIDISFPVFVAVTNVISLICFNTS  169 (494)
T ss_dssp             CSSSSSCSSHHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT--TTEEECCHHHHHHHHHHHHHHHHHSCC
T ss_pred             CCeEeCCCCHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHc--CCCcccHHHHHHHHHHHHHHHHHcCCc
Confidence            5777665 99999999999999974  346678999999999999999763  467899999999999999999999998


Q ss_pred             cCCCCCChhHHHHHHHHHHHHHhcccCCccccccchhcccChh-HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhhh
Q 013953          268 FDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPR-LKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEE  346 (433)
Q Consensus       268 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  346 (433)
                      ++.   +++....+......+............+|++++++.. .++..+..+.+.++++.+++++++...         
T Consensus       170 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------  237 (494)
T 3swz_A          170 YKN---GDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFR---------  237 (494)
T ss_dssp             CCT---TCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCC---------
T ss_pred             CCC---CCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------
Confidence            864   2233333433333333322233344567777776643 455566667777777777776654322         


Q ss_pred             hcccCCCcHHHHHHhC--------------CCCCCHHHHHHHHHHHhhccchhHHHHHHHHHHHHhhChHHHHHHHHHHH
Q 013953          347 YMNEQDPSILHFLLAS--------------GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFC  412 (433)
Q Consensus       347 ~~~~~~~dll~~ll~~--------------~~~lt~~ei~~~~~~ll~AG~dTTa~tL~~~l~~La~~Pevq~kLr~EI~  412 (433)
                        .....|+++.|++.              ++.++++++..++.++++||+|||+++|+|++++|++||++|+||++||+
T Consensus       238 --~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~  315 (494)
T 3swz_A          238 --SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEID  315 (494)
T ss_dssp             --TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             --ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence              22356899999863              11378999999999999999999999999999999999999999999999


Q ss_pred             hhccc------cCCCCCcce
Q 013953          413 SHFII------LHRYKSHFH  426 (433)
Q Consensus       413 ~~~~~------~d~~~~p~~  426 (433)
                      ++++.      .|..++||.
T Consensus       316 ~v~~~~~~~~~~~~~~lpyl  335 (494)
T 3swz_A          316 QNVGFSRTPTISDRNRLLLL  335 (494)
T ss_dssp             HHTCSSSCCCGGGGGTCHHH
T ss_pred             HhcCCCCCCCHHHHhcCHHH
Confidence            99753      334555553
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 433
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 1e-29
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 1e-26
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 7e-24
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 2e-21
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 3e-21
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 3e-16
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 8e-13
d1n97a_385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 5e-12
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 2e-11
d1ueda_ 403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 1e-07
d1gwia_403 a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyce 4e-04
d1z8oa1402 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharo 0.004
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  118 bits (295), Expect = 1e-29
 Identities = 45/278 (16%), Positives = 99/278 (35%), Gaps = 4/278 (1%)

Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSK-GI 180
           G +  +  +        L   YG +F +  G +  +++      +  L D ++ +S  G 
Sbjct: 14  GNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGK 73

Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAAS 240
           +A +     G G+I A+GE WR  RR  +  +    +           +  C   +   S
Sbjct: 74  IAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKS 133

Query: 241 EGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWE 300
           +G   +   LF  +T ++I   VF   FD        +  ++           + +    
Sbjct: 134 KGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELF 193

Query: 301 IPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLL 360
               K      +++   L+ IN  +   +   +  +D    +   +    +   +     
Sbjct: 194 SGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLR---MEKDKS 250

Query: 361 ASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLS 398
               +   + L   ++++  AG ET++  L + F L+ 
Sbjct: 251 DPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLML 288
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 403 Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Length = 402 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query433
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.97
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.97
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.97
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.97
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.93
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.92
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.91
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.9
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.89
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.88
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.85
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.85
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.82
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.81
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.77
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.75
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.64
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=2.1e-37  Score=305.30  Aligned_cols=281  Identities=21%  Similarity=0.324  Sum_probs=225.5

Q ss_pred             ccccccchhhhccccccHHHHHHHHHhCCcEEEEeCCceEEEEcCHHHHHHHHhhCCCCCCchhHHHHHHHhhcCccccc
Q 013953          117 IPEAKGAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPA  196 (433)
Q Consensus       117 ~~p~lG~l~~~~~~~~~~~~~~~~~~yG~i~~i~~g~~~~vvv~dpe~ik~il~~~~~~~~~~~~~~~~~~~~g~~l~~~  196 (433)
                      ++|++||+.++..+.++..+.+|+++|||||++++|+.++|+|+||+++++++.++...+..+.....+..+.|+|+++.
T Consensus         8 ~~p~lG~l~~l~~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~   87 (453)
T d2ij2a1           8 TFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLFTS   87 (453)
T ss_dssp             CCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHHTTSGGGS
T ss_pred             CcchhhCHHHhCCCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHHhcCCcEEec
Confidence            67899999999878889999999999999999999999999999999999999776555556666666677788888764


Q ss_pred             --CCchHHHhHhhhcccCcHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHhHHhcccccCCCCCC
Q 013953          197 --DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTND  274 (433)
Q Consensus       197 --~g~~w~~~Rr~l~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~l~~~  274 (433)
                        +|+.|+++|+++.+.|++++++.+.+.+.++++++++.|.+. .+++++|+.+++..+++|+++.++||.+++.+..+
T Consensus        88 ~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~i~~~~~~li~~l~~~-~~~~~idl~~~~~~~~~~~i~~~~fG~~~~~~~~~  166 (453)
T d2ij2a1          88 WTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD  166 (453)
T ss_dssp             CTTSHHHHHHHHHHGGGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCS
T ss_pred             CCChHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHhhhc-CCCCccchHHHHHHHhhhcchhcccccccchhhhc
Confidence              799999999999999999999999999999999999999753 35778999999999999999999999998754332


Q ss_pred             --hhHHHHHHHHHHHHHhcccCCccccccchhcccChhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhhhhcccCC
Q 013953          275 --TGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQD  352 (433)
Q Consensus       275 --~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  352 (433)
                        .+.+..+...+.........     ..|++..+....++..+..+.+.++++++++++++.             .+..
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------------~~~~  228 (453)
T d2ij2a1         167 QPHPFITSMVRALDEAMNKLQR-----ANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS-------------GEQS  228 (453)
T ss_dssp             SCCHHHHHHHHHHHHHHHTC--------CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------CCCC
T ss_pred             cchHHHHhhhhccchhhhhhhh-----cccccccchhhHHHHHHHHHHHHHHHHHHHhhhccc-------------cccc
Confidence              33444444444433322211     112221122334556667777888888888766543             3456


Q ss_pred             CcHHHHHHhC-----CCCCCHHHHHHHHHHHhhccchhHHHHHHHHHHHHhhChHHHHHHHHHHHhhcc
Q 013953          353 PSILHFLLAS-----GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKVFGIILTFIPWFCSHFI  416 (433)
Q Consensus       353 ~dll~~ll~~-----~~~lt~~ei~~~~~~ll~AG~dTTa~tL~~~l~~La~~Pevq~kLr~EI~~~~~  416 (433)
                      .|+++.+++.     ++.++++++..+++++++||+|||+++++|++++|++||++|+++++|++++..
T Consensus       229 ~d~l~~ll~~~~~~~~~~ls~~ei~~~~~~~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~~~~  297 (453)
T d2ij2a1         229 DDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLV  297 (453)
T ss_dssp             SSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_pred             cchhhhhhhhcccccCcchhhhHHHhhhccccccccccchhhhhcchhhhhcccccchhhhhhhhhhhc
Confidence            7999999865     245899999999999999999999999999999999999999999999998764
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure