Query 013955
Match_columns 433
No_of_seqs 380 out of 2927
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 20:13:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013955.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013955hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 2.1E-66 7.2E-71 523.9 42.6 376 38-413 20-422 (426)
2 2qfp_A Purple acid phosphatase 100.0 3.3E-64 1.1E-68 507.6 41.7 381 38-418 14-421 (424)
3 3tgh_A Glideosome-associated p 100.0 4.9E-37 1.7E-41 298.1 23.2 252 135-416 2-310 (342)
4 2yeq_A Apased, PHOD, alkaline 100.0 2.5E-35 8.7E-40 302.6 32.9 354 48-412 13-479 (527)
5 1ute_A Protein (II purple acid 100.0 2.6E-32 8.9E-37 262.7 20.9 260 130-414 1-304 (313)
6 3ib7_A ICC protein; metallopho 99.9 2.6E-24 9E-29 208.7 19.9 237 134-400 23-281 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 8E-23 2.7E-27 192.8 20.2 230 137-398 1-255 (274)
8 2nxf_A Putative dimetal phosph 99.9 5.7E-23 1.9E-27 198.0 17.3 225 134-395 3-311 (322)
9 2xmo_A LMO2642 protein; phosph 99.8 1.8E-19 6.3E-24 182.0 22.2 196 134-331 37-288 (443)
10 1uf3_A Hypothetical protein TT 99.6 2.9E-16 9.9E-21 143.4 10.0 170 136-326 5-190 (228)
11 2yvt_A Hypothetical protein AQ 99.6 2.4E-15 8.1E-20 140.5 11.4 181 136-326 5-222 (260)
12 2q8u_A Exonuclease, putative; 99.6 5.3E-15 1.8E-19 143.8 10.9 244 134-410 16-289 (336)
13 1z2w_A Vacuolar protein sortin 99.5 3.7E-12 1.3E-16 113.5 20.0 179 135-412 9-191 (192)
14 2a22_A Vacuolar protein sortin 99.5 1.3E-12 4.5E-17 118.6 17.2 186 136-411 25-214 (215)
15 3rl5_A Metallophosphoesterase 99.4 5.3E-13 1.8E-17 125.8 11.8 204 134-355 57-278 (296)
16 3av0_A DNA double-strand break 99.4 2.6E-12 8.9E-17 127.1 17.4 229 134-397 18-264 (386)
17 3qfm_A SAPH, putative uncharac 99.4 2.2E-12 7.6E-17 121.2 13.2 220 134-397 9-229 (270)
18 3ck2_A Conserved uncharacteriz 99.4 2.3E-11 7.8E-16 106.7 17.9 165 136-409 6-171 (176)
19 1nnw_A Hypothetical protein; s 99.4 9.6E-13 3.3E-17 122.3 9.3 188 137-355 2-198 (252)
20 3tho_B Exonuclease, putative; 99.4 3.9E-12 1.3E-16 125.4 13.5 230 137-396 1-260 (379)
21 2kkn_A Uncharacterized protein 99.2 2.5E-10 8.7E-15 100.2 16.5 64 134-208 20-86 (178)
22 1xm7_A Hypothetical protein AQ 99.2 3.9E-11 1.3E-15 107.1 9.3 153 137-351 2-171 (195)
23 3rqz_A Metallophosphoesterase; 99.2 4.4E-11 1.5E-15 110.7 9.0 179 135-355 2-194 (246)
24 4fbw_A DNA repair protein RAD3 99.2 1.5E-09 5.2E-14 107.1 19.8 246 133-413 10-318 (417)
25 1s3l_A Hypothetical protein MJ 99.2 1.5E-10 5.3E-15 102.7 10.8 141 136-354 25-167 (190)
26 4fbk_A DNA repair and telomere 99.1 2.8E-09 9.4E-14 106.1 20.7 244 134-412 74-380 (472)
27 3t1i_A Double-strand break rep 99.1 8.8E-09 3E-13 102.1 22.6 240 133-411 29-335 (431)
28 1ii7_A MRE11 nuclease; RAD50, 99.1 2.9E-10 9.9E-15 110.1 11.4 72 137-208 1-88 (333)
29 1su1_A Hypothetical protein YF 98.9 1.5E-08 5.1E-13 91.2 12.0 72 135-208 24-101 (208)
30 2z1a_A 5'-nucleotidase; metal- 98.8 1.5E-08 5E-13 104.7 9.2 173 134-330 27-244 (552)
31 1hp1_A 5'-nucleotidase; metall 98.8 2.8E-08 9.7E-13 101.8 11.2 185 134-329 6-232 (516)
32 3qfk_A Uncharacterized protein 98.7 2E-07 6.9E-12 95.7 14.5 204 134-355 17-270 (527)
33 3ive_A Nucleotidase; structura 98.5 7.6E-07 2.6E-11 90.9 14.2 186 135-328 5-237 (509)
34 4h2g_A 5'-nucleotidase; dimer, 98.5 2.3E-07 8E-12 95.5 9.7 176 134-329 23-245 (546)
35 2wdc_A SOXB, sulfur oxidation 98.5 1E-06 3.5E-11 90.9 14.1 149 155-329 111-291 (562)
36 3ztv_A NAD nucleotidase, NADN; 98.5 8.9E-07 3E-11 91.8 12.8 174 135-329 11-231 (579)
37 1g5b_A Serine/threonine protei 98.4 1.2E-07 4E-12 86.0 4.5 68 134-208 10-79 (221)
38 3c9f_A 5'-nucleotidase; 2',3'- 98.4 1E-05 3.6E-10 83.1 17.4 181 134-329 13-243 (557)
39 1t70_A Phosphatase; crystal, X 98.3 1.1E-05 3.8E-10 74.1 14.4 186 137-354 1-199 (255)
40 1t71_A Phosphatase, conserved 98.3 1.4E-05 4.9E-10 74.4 14.1 188 135-348 3-202 (281)
41 2z06_A Putative uncharacterize 98.2 1.2E-05 4.1E-10 73.6 12.6 187 137-354 1-196 (252)
42 3gve_A YFKN protein; alpha-bet 98.1 3.2E-05 1.1E-09 74.6 14.0 60 266-329 195-254 (341)
43 3jyf_A 2',3'-cyclic nucleotide 97.8 0.00022 7.6E-09 68.5 14.1 74 135-209 7-106 (339)
44 4h1s_A 5'-nucleotidase; hydrol 97.7 0.00053 1.8E-08 70.2 15.4 170 136-329 3-223 (530)
45 2edd_A Netrin receptor DCC; tu 97.6 0.00091 3.1E-08 54.2 11.7 91 32-133 11-117 (123)
46 2ede_A Netrin receptor DCC; tu 97.5 0.0011 3.7E-08 52.4 11.0 87 37-133 6-108 (114)
47 1x4y_A Biregional cell adhesio 97.4 0.00099 3.4E-08 52.8 10.3 90 36-133 5-108 (114)
48 2haz_A N-CAM 1, neural cell ad 97.3 0.0017 5.8E-08 50.7 10.0 86 38-132 6-104 (105)
49 1x5j_A Neogenin; RGM binding, 97.3 0.00064 2.2E-08 54.2 7.6 84 38-132 7-106 (113)
50 1x5f_A Neogenin; RGM binding, 97.3 0.0047 1.6E-07 49.1 12.8 84 40-133 18-114 (120)
51 2qjc_A Diadenosine tetraphosph 97.3 9.9E-05 3.4E-09 68.4 2.8 65 137-208 19-85 (262)
52 2edy_A Receptor-type tyrosine- 97.2 0.00053 1.8E-08 53.0 6.2 82 38-132 7-102 (103)
53 3n1f_C Cell adhesion molecule- 97.1 0.0035 1.2E-07 48.7 10.0 74 38-121 3-84 (102)
54 2dfj_A Diadenosinetetraphospha 97.1 0.00025 8.7E-09 66.3 3.7 67 137-208 1-69 (280)
55 1x4x_A Fibronectin type-III do 97.1 0.0016 5.3E-08 51.0 7.6 81 40-133 8-100 (106)
56 2djs_A Ephrin type-B receptor 97.1 0.0019 6.6E-08 50.4 8.2 81 42-133 10-102 (108)
57 2ee2_A Contactin-1; neural cel 97.0 0.0028 9.5E-08 50.5 8.8 88 36-132 15-112 (119)
58 2dkm_A Collagen alpha-1(XX) ch 97.0 0.003 1E-07 49.2 8.6 73 39-121 8-80 (104)
59 2ed7_A Netrin receptor DCC; tu 97.0 0.0063 2.2E-07 48.1 10.8 84 39-132 17-112 (119)
60 2rb8_A Tenascin; beta sheet,lo 97.0 0.0076 2.6E-07 46.9 10.9 82 41-132 4-93 (104)
61 3b83_A Ten-D3; beta sheet, com 97.0 0.0077 2.6E-07 46.4 10.9 71 41-121 3-74 (100)
62 2dm4_A Sortilin-related recept 97.0 0.0086 2.9E-07 46.6 11.3 78 42-132 10-101 (108)
63 2ed8_A Netrin receptor DCC; tu 96.9 0.0066 2.3E-07 47.1 10.1 78 42-132 10-99 (106)
64 1va9_A DOWN syndrome cell adhe 96.9 0.0071 2.4E-07 48.0 10.3 91 36-132 12-116 (122)
65 1x5l_A Ephrin type-A receptor 96.9 0.0032 1.1E-07 49.3 8.0 82 41-133 12-105 (111)
66 2dju_A Receptor-type tyrosine- 96.9 0.0044 1.5E-07 47.9 8.7 81 41-132 9-99 (106)
67 1x5g_A Neogenin; RGM binding, 96.9 0.004 1.4E-07 49.1 8.4 80 40-132 18-109 (116)
68 1x5x_A Fibronectin type-III do 96.9 0.0047 1.6E-07 48.3 8.7 81 41-132 9-102 (109)
69 1wis_A KIAA1514 protein; FNIII 96.8 0.011 3.6E-07 47.6 10.6 81 34-121 12-98 (124)
70 2ed9_A Netrin receptor DCC; tu 96.8 0.0047 1.6E-07 49.4 8.2 84 37-132 26-123 (124)
71 2dle_A Receptor-type tyrosine- 96.8 0.0072 2.5E-07 47.3 9.0 78 41-133 9-97 (104)
72 2z72_A Protein-tyrosine-phosph 96.8 0.0014 4.6E-08 63.2 5.6 72 134-208 68-153 (342)
73 2edx_A Protein tyrosine phosph 96.8 0.0098 3.3E-07 48.1 10.2 88 37-132 16-117 (134)
74 2e7h_A Ephrin type-B receptor 96.7 0.0045 1.5E-07 48.5 7.6 80 42-133 10-103 (109)
75 1wfo_A Sidekick 2; FN3, cell a 96.7 0.0054 1.9E-07 49.5 8.1 84 41-133 29-124 (130)
76 1x5a_A Ephrin type-A receptor 96.6 0.0049 1.7E-07 48.3 7.2 78 41-133 11-101 (107)
77 2ie4_C PP2A-alpha;, serine/thr 96.6 0.0015 5.1E-08 61.8 4.8 69 137-208 50-121 (309)
78 2dlh_A Receptor-type tyrosine- 96.6 0.0056 1.9E-07 48.6 7.4 88 36-132 15-114 (121)
79 3e0j_A DNA polymerase subunit 96.6 0.01 3.5E-07 58.9 10.6 138 134-273 198-378 (476)
80 1x5h_A Neogenin; RGM binding, 96.6 0.011 3.7E-07 47.8 9.2 90 37-132 16-115 (132)
81 1k85_A Chitinase A1; fibronect 96.6 0.024 8.4E-07 42.2 10.5 67 40-121 4-70 (88)
82 1x5z_A Receptor-type tyrosine- 96.6 0.013 4.4E-07 46.0 9.3 81 41-133 19-109 (115)
83 2dbj_A Proto-oncogene tyrosine 96.6 0.017 5.8E-07 46.2 10.1 89 36-133 15-118 (124)
84 2cum_A Tenascin-X; hexabrachio 96.5 0.016 5.6E-07 45.0 9.6 82 39-132 7-96 (105)
85 3tes_A Tencon; fibronectin typ 96.5 0.011 3.9E-07 45.3 8.6 70 42-121 4-74 (98)
86 1x4z_A Biregional cell adhesio 96.5 0.016 5.6E-07 46.1 9.8 76 38-121 16-95 (121)
87 3teu_A Fibcon; FN3 domain, fib 96.5 0.016 5.6E-07 44.2 9.4 71 41-121 3-74 (98)
88 1uen_A KIAA0343 protein; immun 96.5 0.0059 2E-07 48.8 7.0 91 36-132 11-118 (125)
89 2kbg_A N-CAM 2, neural cell ad 96.5 0.0064 2.2E-07 48.5 7.0 73 51-133 19-102 (114)
90 2ic2_A CG9211-PA, GH03927P; IH 96.5 0.024 8.4E-07 44.9 10.3 80 39-121 5-90 (115)
91 3k2m_C Monobody HA4; engineere 96.5 0.011 3.7E-07 45.7 8.0 71 41-121 6-79 (101)
92 2cuh_A Tenascin-X; fibronectin 96.4 0.015 5.1E-07 46.0 8.8 81 40-132 8-96 (115)
93 1fjm_A Protein serine/threonin 96.4 0.0025 8.5E-08 60.7 4.7 69 137-208 57-128 (330)
94 2ee3_A Collagen alpha-1(XX) ch 96.4 0.016 5.5E-07 45.5 8.7 84 38-132 6-97 (108)
95 2e3v_A Neural cell adhesion mo 96.4 0.019 6.4E-07 46.0 9.3 82 43-132 11-105 (122)
96 1x3d_A Fibronectin type-III do 96.4 0.016 5.5E-07 45.8 8.8 82 40-132 18-111 (118)
97 3t04_D Monobody 7C12; engineer 96.3 0.0071 2.4E-07 47.0 6.4 72 40-121 8-83 (103)
98 2ocf_D Fibronectin; estrogen r 96.3 0.021 7.2E-07 45.8 9.4 74 38-121 27-101 (121)
99 2dmk_A Midline 2 isoform 2; mi 96.3 0.018 6.2E-07 46.5 9.0 84 38-132 14-117 (127)
100 3p4l_A Neogenin; iron homeosta 96.3 0.022 7.5E-07 49.9 10.1 84 38-132 3-102 (211)
101 2yuw_A Myosin binding protein 96.3 0.015 5.2E-07 45.3 8.2 73 39-121 7-84 (110)
102 1bpv_A Titin, A71, connectin; 96.3 0.0065 2.2E-07 48.1 5.9 75 37-121 8-87 (112)
103 3qwq_B Adnectin; cell surface 96.2 0.024 8.1E-07 45.0 9.0 72 40-121 4-76 (114)
104 1x5y_A Myosin binding protein 96.2 0.011 3.7E-07 46.4 6.9 74 38-121 7-85 (111)
105 2crm_A Fibronectin type-III do 96.2 0.02 6.7E-07 45.5 8.5 81 41-132 19-113 (120)
106 2crz_A Fibronectin type-III do 96.1 0.016 5.6E-07 45.2 7.4 81 40-132 9-103 (110)
107 1wk0_A KIAA0970 protein; fibro 96.1 0.013 4.5E-07 48.3 6.9 76 47-133 25-121 (137)
108 2cui_A Tenascin-X; fibronectin 96.1 0.016 5.6E-07 45.8 7.2 78 40-121 9-89 (112)
109 1qr4_A Protein (tenascin); fib 96.0 0.039 1.3E-06 47.1 10.2 82 40-132 95-184 (186)
110 3qht_C Monobody YSMB-1; fibron 96.0 0.016 5.4E-07 44.3 6.7 72 40-121 5-77 (97)
111 1v5j_A KIAA1355 protein, RSGI 96.0 0.037 1.3E-06 43.5 9.0 83 39-132 7-101 (108)
112 3icf_A PPT, serine/threonine-p 96.0 0.0094 3.2E-07 56.7 6.5 72 134-208 61-136 (335)
113 3e7a_A PP-1A, serine/threonine 96.0 0.0062 2.1E-07 57.0 5.0 68 138-208 57-127 (299)
114 3h63_A Serine/threonine-protei 95.9 0.0074 2.5E-07 57.0 5.3 71 135-208 58-132 (315)
115 1wao_1 Serine/threonine protei 95.9 0.0082 2.8E-07 60.4 5.6 71 135-208 211-285 (477)
116 2ibg_A CG9211-PA, GH03927P; IH 95.8 0.027 9.3E-07 49.3 8.4 85 39-132 115-212 (214)
117 2dn7_A Receptor-type tyrosine- 95.8 0.061 2.1E-06 41.3 9.4 68 42-121 10-81 (107)
118 1uey_A KIAA0343 protein; immun 95.8 0.11 3.8E-06 41.4 11.2 84 39-132 16-113 (127)
119 3ll8_A Serine/threonine-protei 95.8 0.0084 2.9E-07 57.4 5.0 69 137-208 70-141 (357)
120 3mpc_A FN3-like protein; fibro 95.8 0.043 1.5E-06 42.7 8.3 71 40-121 5-76 (103)
121 1wfu_A Unnamed protein product 95.7 0.016 5.4E-07 46.6 5.8 81 41-132 17-113 (120)
122 3f7q_A Integrin beta-4, GP150; 95.7 0.069 2.4E-06 47.6 10.8 84 38-132 4-96 (234)
123 2yux_A Myosin-binding protein 95.7 0.041 1.4E-06 43.6 8.3 72 39-121 17-93 (120)
124 1tdq_A Tenascin-R; extracellul 95.7 0.097 3.3E-06 47.8 12.0 86 38-133 13-106 (283)
125 1j8k_A Fibronectin; EDA, TYPEI 95.7 0.015 5.2E-07 43.9 5.3 71 41-121 3-74 (94)
126 1uem_A KIAA1568 protein; immun 95.6 0.024 8.4E-07 44.5 6.6 72 40-121 16-91 (117)
127 1uc6_A CNTF receptor, ciliary 95.5 0.07 2.4E-06 41.6 8.9 76 34-121 2-86 (109)
128 2yrz_A Integrin beta-4; GP150, 95.5 0.038 1.3E-06 43.5 7.4 71 41-121 19-92 (118)
129 1ujt_A KIAA1568 protein; fibro 95.5 0.061 2.1E-06 43.0 8.6 79 45-132 18-113 (120)
130 1aui_A Calcineurin, serine/thr 95.5 0.01 3.5E-07 59.4 4.5 69 137-208 83-154 (521)
131 2db8_A Tripartite motif protei 95.4 0.013 4.6E-07 45.9 4.1 70 52-133 23-104 (110)
132 1qr4_A Protein (tenascin); fib 95.3 0.06 2.1E-06 46.0 8.6 82 40-133 7-96 (186)
133 1cfb_A Drosophila neuroglian; 95.3 0.084 2.9E-06 45.8 9.5 76 37-121 102-183 (205)
134 3l5i_A Interleukin-6 receptor 95.2 0.068 2.3E-06 49.1 9.2 82 38-132 196-290 (290)
135 1tdq_A Tenascin-R; extracellul 95.2 0.3 1E-05 44.5 13.6 75 39-121 104-179 (283)
136 2b5i_B Interleukin-2 receptor 95.2 0.098 3.4E-06 46.4 9.9 91 34-133 100-208 (214)
137 2qbw_A PDZ-fibronectin fusion 95.2 0.044 1.5E-06 47.8 7.3 73 39-121 103-176 (195)
138 2vkw_A Neural cell adhesion mo 95.2 0.084 2.9E-06 46.0 9.3 86 39-132 8-106 (209)
139 1wf5_A Sidekick 2 protein; FNI 95.1 0.043 1.5E-06 43.3 6.5 72 40-121 18-95 (121)
140 2gee_A Hypothetical protein; f 95.1 0.24 8.3E-06 42.9 12.0 70 42-121 25-96 (203)
141 2w1n_A O-GLCNACASE NAGJ; hexos 95.1 0.14 4.8E-06 45.1 9.9 68 41-121 152-219 (238)
142 2ha1_A Fibronectin; beta sandw 95.1 0.054 1.8E-06 47.0 7.5 70 42-121 2-75 (201)
143 3lpw_A A77-A78 domain from tit 95.0 0.14 4.9E-06 43.6 9.9 72 39-121 5-81 (197)
144 3p4l_A Neogenin; iron homeosta 94.9 0.1 3.5E-06 45.5 9.0 88 37-132 103-204 (211)
145 1wfn_A Sidekick 2; FN3, cell a 94.9 0.047 1.6E-06 43.1 6.1 71 41-121 19-93 (119)
146 2ekj_A Collagen alpha-1(XX) ch 94.8 0.015 5.2E-07 45.1 2.9 72 40-121 8-80 (105)
147 1oww_A FN, fibronectin first t 94.8 0.12 4E-06 38.7 7.3 80 41-130 6-96 (98)
148 2gee_A Hypothetical protein; f 94.7 0.12 4.2E-06 44.9 9.0 70 42-121 116-187 (203)
149 2edb_A Netrin receptor DCC; tu 94.7 0.099 3.4E-06 41.2 7.5 68 41-121 19-90 (116)
150 3r8q_A Fibronectin; heparin, F 94.6 0.31 1.1E-05 44.6 12.0 71 40-121 113-184 (290)
151 1bqu_A Protein (GP130); cytoki 94.6 0.079 2.7E-06 46.3 7.5 75 39-121 103-183 (215)
152 3r8q_A Fibronectin; heparin, F 94.6 0.14 4.7E-06 47.1 9.5 74 38-121 19-93 (290)
153 3lpw_A A77-A78 domain from tit 94.6 0.14 4.8E-06 43.6 9.0 71 39-121 102-177 (197)
154 3n06_B PRL-R, prolactin recept 94.4 0.31 1.1E-05 42.4 10.9 83 38-132 101-204 (210)
155 1cfb_A Drosophila neuroglian; 94.3 0.15 5.2E-06 44.1 8.7 72 40-121 6-81 (205)
156 1x5i_A Neogenin; RGM binding, 94.3 0.094 3.2E-06 42.0 6.6 69 40-121 28-100 (126)
157 2vkw_A Neural cell adhesion mo 94.2 0.16 5.3E-06 44.2 8.3 72 39-121 109-184 (209)
158 2ibg_A CG9211-PA, GH03927P; IH 94.1 0.11 3.6E-06 45.4 7.2 80 42-121 4-89 (214)
159 3t1w_A Four-domain fibronectin 94.1 0.15 5.2E-06 48.6 8.9 74 39-121 2-78 (375)
160 1cd9_B G-CSF-R, protein (G-CSF 94.1 0.19 6.4E-06 43.9 8.8 85 38-132 107-213 (215)
161 1i1r_A GP130, interleukin-6 re 94.1 0.13 4.3E-06 47.8 8.0 87 38-132 198-301 (303)
162 3fl7_A Ephrin receptor; ATP-bi 93.7 0.31 1.1E-05 49.5 10.6 82 40-133 441-534 (536)
163 2h41_A Fibronectin; beta sandw 93.5 0.041 1.4E-06 42.1 2.8 64 48-121 14-78 (95)
164 3up1_A Interleukin-7 receptor 93.1 0.59 2E-05 41.7 10.2 87 37-133 110-215 (223)
165 1fnf_A Fibronectin; RGD, extra 93.1 0.29 1E-05 46.4 8.8 73 40-121 2-77 (368)
166 1eer_B Epobp, erythropoietin r 93.1 0.72 2.5E-05 40.8 10.9 73 39-121 121-199 (227)
167 3csg_A MBP, maltose-binding pr 92.6 0.12 4.2E-06 51.3 5.6 71 41-121 371-443 (461)
168 2d9q_B Granulocyte colony-stim 92.2 0.5 1.7E-05 43.9 9.0 84 39-132 202-307 (313)
169 1wj3_A KIAA1496 protein; beta 92.1 0.31 1.1E-05 38.4 6.4 83 36-133 15-111 (117)
170 2jll_A NCAM2, neural cell adhe 92.1 0.53 1.8E-05 44.8 9.2 84 39-133 293-387 (389)
171 3t1w_A Four-domain fibronectin 91.9 0.56 1.9E-05 44.6 9.2 73 39-121 277-350 (375)
172 1fnf_A Fibronectin; RGD, extra 91.8 1.4 4.8E-05 41.6 11.8 73 39-121 185-258 (368)
173 3f7q_A Integrin beta-4, GP150; 91.4 0.25 8.7E-06 43.8 5.7 76 41-121 100-179 (234)
174 3v6o_A Leptin receptor; recept 90.7 0.49 1.7E-05 41.3 6.8 78 35-121 105-186 (206)
175 3mtr_A N-CAM-1, NCAM-1, neural 90.7 0.85 2.9E-05 39.4 8.3 87 39-133 113-212 (215)
176 1q38_A Fibronectin; amyloid fi 89.5 0.14 4.9E-06 37.0 1.8 64 58-131 2-74 (89)
177 3uto_A Twitchin; kinase, muscl 89.4 1.3 4.4E-05 45.3 9.6 71 39-121 9-84 (573)
178 2ha1_A Fibronectin; beta sandw 89.2 0.32 1.1E-05 41.9 4.2 67 45-121 117-184 (201)
179 2q7n_A Leukemia inhibitory fac 89.2 0.64 2.2E-05 46.6 7.0 88 38-132 385-486 (488)
180 3e0g_A Leukemia inhibitory fac 88.9 0.35 1.2E-05 48.5 4.8 88 38-132 380-481 (483)
181 1zlg_A Anosmin 1; insulin-like 88.9 1.9 6.5E-05 45.0 10.7 79 38-121 265-353 (680)
182 3l5i_A Interleukin-6 receptor 88.8 1.6 5.5E-05 39.6 9.0 75 39-121 101-176 (290)
183 3flo_A DNA polymerase alpha su 87.8 0.73 2.5E-05 45.5 6.1 74 135-208 146-247 (460)
184 2v5y_A Receptor-type tyrosine- 87.7 2.5 8.5E-05 44.4 10.7 90 37-132 357-459 (731)
185 1iar_B Protein (interleukin-4 87.5 2.1 7.1E-05 37.2 8.5 90 35-132 93-200 (207)
186 3tgx_A Interleukin-21 receptor 87.0 2.3 7.9E-05 37.4 8.6 90 36-133 97-209 (219)
187 1axi_B HGHBP, growth hormone r 86.4 1 3.5E-05 40.2 5.9 72 38-121 129-214 (236)
188 1bqu_A Protein (GP130); cytoki 85.9 1.2 4E-05 38.6 5.9 73 38-121 6-82 (215)
189 3l5h_A Interleukin-6 receptor 85.1 0.4 1.4E-05 48.8 2.8 75 39-121 198-278 (589)
190 2jll_A NCAM2, neural cell adhe 84.7 6.5 0.00022 36.9 11.2 83 39-132 195-290 (389)
191 1n26_A IL-6 receptor alpha cha 84.4 2.8 9.5E-05 39.1 8.2 72 39-121 196-275 (325)
192 3bpo_C Interleukin-13 receptor 84.3 3.6 0.00012 38.0 8.9 81 39-121 199-286 (314)
193 2gys_A Cytokine receptor commo 83.7 10 0.00034 36.6 12.2 89 35-133 104-216 (419)
194 2b5i_C Cytokine receptor commo 83.7 3.3 0.00011 35.6 7.8 72 38-121 97-170 (199)
195 1zlg_A Anosmin 1; insulin-like 82.6 2.7 9.1E-05 43.9 7.9 78 40-121 160-242 (680)
196 2erj_C Cytokine receptor commo 80.5 6.7 0.00023 35.1 8.8 72 38-121 135-208 (247)
197 2uvf_A Exopolygalacturonase; G 80.0 3.3 0.00011 42.6 7.3 93 41-135 36-155 (608)
198 3fl7_A Ephrin receptor; ATP-bi 78.9 3 0.0001 42.2 6.5 82 38-121 332-419 (536)
199 3b4n_A Endo-pectate lyase; pec 78.1 3.8 0.00013 38.2 6.2 66 42-121 20-90 (344)
200 4doh_R Interleukin-20 receptor 76.4 12 0.0004 32.8 9.0 78 41-133 110-214 (221)
201 3lqm_A Interleukin-10 receptor 75.8 12 0.00041 32.0 8.8 19 103-121 156-174 (201)
202 3s98_A Interferon alpha/beta r 75.6 13 0.00046 34.1 9.6 66 40-121 102-178 (306)
203 4go6_B HCF C-terminal chain 1; 75.2 10 0.00035 33.2 8.4 16 106-121 167-182 (232)
204 1i1r_A GP130, interleukin-6 re 75.2 4.2 0.00014 37.2 5.9 73 38-121 102-178 (303)
205 4doh_B Interleukin-20 receptor 75.1 4.6 0.00016 35.1 5.9 65 46-121 115-179 (206)
206 2nzi_A Titin; IG-domain, FNIII 73.9 12 0.0004 33.7 8.7 70 40-121 199-273 (305)
207 3se4_A Interferon alpha/beta r 73.3 13 0.00045 35.7 9.3 64 42-121 108-182 (414)
208 3l5h_A Interleukin-6 receptor 71.4 11 0.00036 38.0 8.4 74 40-121 401-475 (589)
209 2dtg_E Insulin receptor; IR ec 70.8 2.3 7.8E-05 46.0 3.3 20 102-121 549-568 (897)
210 3n06_B PRL-R, prolactin recept 64.0 16 0.00055 31.0 7.0 77 38-121 2-81 (210)
211 2dtg_E Insulin receptor; IR ec 63.9 0.89 3E-05 49.3 -1.6 89 40-133 793-889 (897)
212 4go6_B HCF C-terminal chain 1; 61.9 7.7 0.00026 34.1 4.5 30 103-132 47-84 (232)
213 1cd9_B G-CSF-R, protein (G-CSF 61.6 34 0.0012 28.9 8.7 79 39-121 4-87 (215)
214 3lb6_C IL-13, interleukin-13 r 61.3 2.7 9.1E-05 40.5 1.4 89 39-142 237-346 (380)
215 2v5y_A Receptor-type tyrosine- 61.1 43 0.0015 34.7 10.8 72 48-132 270-356 (731)
216 2gys_A Cytokine receptor commo 55.1 12 0.00042 36.0 5.0 66 45-121 326-396 (419)
217 3w01_A Heptaprenylglyceryl pho 39.2 60 0.0021 28.7 6.4 66 136-207 11-76 (235)
218 3s98_A Interferon alpha/beta r 36.6 81 0.0028 28.6 7.3 36 38-74 201-236 (306)
219 2d9q_B Granulocyte colony-stim 35.9 1.5E+02 0.0051 26.5 9.1 81 38-121 97-181 (313)
220 3g9v_A Interleukin 22 receptor 35.5 10 0.00035 32.9 0.8 65 41-119 109-189 (211)
221 3se4_A Interferon alpha/beta r 33.9 85 0.0029 29.8 7.2 86 38-132 205-306 (414)
222 3vzx_A Heptaprenylglyceryl pho 31.9 66 0.0023 28.3 5.4 65 136-207 6-71 (228)
223 2fyw_A Conserved hypothetical 29.5 90 0.0031 28.0 6.1 43 283-327 62-104 (267)
224 2yyb_A Hypothetical protein TT 29.3 82 0.0028 27.9 5.7 41 283-327 60-100 (242)
225 2f6u_A GGGPS, (S)-3-O-geranylg 24.0 1.3E+02 0.0044 26.5 5.9 64 135-205 7-71 (234)
226 3d85_D IL-12B, interleukin-12 22.0 1.4E+02 0.0047 27.2 6.0 39 39-77 212-259 (306)
227 2nyd_A UPF0135 protein SA1388; 21.4 1.1E+02 0.0039 28.9 5.3 42 283-327 64-105 (370)
228 1viz_A PCRB protein homolog; s 20.9 1.4E+02 0.0049 26.3 5.6 64 135-205 7-71 (240)
229 3q48_A Chaperone CUPB2; IG fol 20.7 1.7E+02 0.0059 26.0 6.2 28 47-75 36-64 (257)
230 3o81_A Beta-2-microglobulin; I 20.6 2.8E+02 0.0096 21.1 6.7 13 53-65 52-64 (119)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=2.1e-66 Score=523.90 Aligned_cols=376 Identities=45% Similarity=0.776 Sum_probs=320.9
Q ss_pred CCCCCCceEEEEecC--CCcEEEEEEcC-CCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 38 KPSSHPQQVHISLAG--DSHMRVTWITD-DESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~--~~~~~i~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
.+...|+||||++++ .++|+|+|+|. ..++.+.|+|++.++.+...+.++.++|.+....++++|+|+|+||+|||+
T Consensus 20 ~~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 99 (426)
T 1xzw_A 20 SGYNAPQQVHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTK 99 (426)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCE
T ss_pred CCCCCCceEEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCE
Confidence 456789999999988 59999999999 777888999999987777778777666665445788999999999999999
Q ss_pred EEEEecc--cCCeeEEECCCC---CCCeEEEEEecCCCCCChHHHHHHhhcC--CCceEEccccccccccc----hhhHH
Q 013955 115 YFYRCGR--QGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYADYM----QHRWD 183 (433)
Q Consensus 115 Y~Y~v~~--~s~~~~F~T~p~---~~~~~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~~~~~~----~~~w~ 183 (433)
|+|||+. .|+.++|+|+|. ..++||+++||+|.......+++++.+. +|||||++||++|.++. ...|+
T Consensus 100 Y~Yrv~~g~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~ 179 (426)
T 1xzw_A 100 YYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWD 179 (426)
T ss_dssp EEEEECCGGGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHH
T ss_pred EEEEECCCCccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHH
Confidence 9999985 578999999885 5789999999998765456678888755 99999999999997654 45788
Q ss_pred HhhhhhhhhhhCCCceeccCCCcCCCCCc--ccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCCh
Q 013955 184 TFGELVQPLASARPWMVTQGNHEKESIPL--IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYS 261 (433)
Q Consensus 184 ~~~~~~~~l~~~iP~~~v~GNHD~~~~~~--~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~ 261 (433)
.|.+.++++...+|+++++||||+...+. ....+..|..+|.+|.+..+..++.||+|++|+++||+||++..+..+.
T Consensus 180 ~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~ 259 (426)
T 1xzw_A 180 TWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYS 259 (426)
T ss_dssp HHHHHHHHHHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTS
T ss_pred HHHHHHHHHHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCH
Confidence 88888888887899999999999975321 1134566788888887554455678999999999999999988777789
Q ss_pred HHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCc---
Q 013955 262 DQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK--- 338 (433)
Q Consensus 262 ~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~--- 338 (433)
+|++||+++|+++++++++|+||++|+|+++....+.++...+++.|+++|++++|+++|+||+|.|+|..|+++++
T Consensus 260 ~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~ 339 (426)
T 1xzw_A 260 PQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNI 339 (426)
T ss_dssp HHHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCS
T ss_pred HHHHHHHHHHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccc
Confidence 99999999999986557889999999999987654445556689999999999999999999999999999987765
Q ss_pred --------cCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEE
Q 013955 339 --------PDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWI 410 (433)
Q Consensus 339 --------~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i 410 (433)
.+++|++||++|+||+.+++...+..++|+|++|+...+||++|++.+++++.|+|++++||++.|.|+|||
T Consensus 340 ~~g~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i 419 (426)
T 1xzw_A 340 VNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWL 419 (426)
T ss_dssp TTCCCCCEECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEE
T ss_pred cCCccccccCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEE
Confidence 246899999999999987764467678899999999999999999999999999999999999889999999
Q ss_pred EeC
Q 013955 411 TSL 413 (433)
Q Consensus 411 ~~~ 413 (433)
.|+
T Consensus 420 ~~~ 422 (426)
T 1xzw_A 420 LNR 422 (426)
T ss_dssp ECS
T ss_pred Eec
Confidence 997
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=3.3e-64 Score=507.64 Aligned_cols=381 Identities=44% Similarity=0.735 Sum_probs=316.1
Q ss_pred CCCCCCceEEEEecC--CCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 38 KPSSHPQQVHISLAG--DSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~--~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.+...|+||||++++ +++|+|+|.|...++.+.|+|++.++.+...+.|+.++|.+....++++|+|+|+||+|||+|
T Consensus 14 ~~~~~P~~v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 93 (424)
T 2qfp_A 14 PGYNAPQQVHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKY 93 (424)
T ss_dssp CSTTCCEEEEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEE
T ss_pred CCCCCCceEEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEE
Confidence 344689999999987 589999999987677889999999877777777776655543356789999999999999999
Q ss_pred EEEecc--cCCeeEEECCCC---CCCeEEEEEecCCCCCChHHHHHHhhcC--CCceEEccccccccccc----hhhHHH
Q 013955 116 FYRCGR--QGPEFEFKTPPA---QFPITFAVAGDLGQTGWTKSTLDHIGQC--KYDVHLLPGDLSYADYM----QHRWDT 184 (433)
Q Consensus 116 ~Y~v~~--~s~~~~F~T~p~---~~~~~f~~~gD~~~~~~~~~~l~~i~~~--~pd~vl~~GD~~~~~~~----~~~w~~ 184 (433)
+|||+. .|+.++|+|+|. ..++||+++||+|.......+++.+.+. +|||||++||++|.++. ...|+.
T Consensus 94 ~Yrv~~~~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~ 173 (424)
T 2qfp_A 94 YYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDT 173 (424)
T ss_dssp EEEECCSSSCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHH
T ss_pred EEEECCCCccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHH
Confidence 999986 478999999885 4689999999998764444567777654 89999999999997653 357888
Q ss_pred hhhhhhhhhhCCCceeccCCCcCCCCCcc--cccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChH
Q 013955 185 FGELVQPLASARPWMVTQGNHEKESIPLI--MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSD 262 (433)
Q Consensus 185 ~~~~~~~l~~~iP~~~v~GNHD~~~~~~~--~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~ 262 (433)
|.+.++++...+|+++++||||+...+.. ...+..|..+|.+|........+.||+|++|+++||+||+...++...+
T Consensus 174 ~~~~l~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~ 253 (424)
T 2qfp_A 174 WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTP 253 (424)
T ss_dssp HHHHHHHHHTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSH
T ss_pred HHHHHHHHHhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHH
Confidence 88888888878999999999999643211 1245667788888865444456789999999999999999877666689
Q ss_pred HHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCc----
Q 013955 263 QYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGK---- 338 (433)
Q Consensus 263 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~---- 338 (433)
|++||+++|+++++++++|+||++|+|+++....+..+...+++.|+++|++++|+++|+||+|.|+|..|+++..
T Consensus 254 Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~ 333 (424)
T 2qfp_A 254 QYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKIT 333 (424)
T ss_dssp HHHHHHHHHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSS
T ss_pred HHHHHHHHHhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceecc
Confidence 9999999999986656789999999999987544434455678999999999999999999999999999876532
Q ss_pred -------cCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEE
Q 013955 339 -------PDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWIT 411 (433)
Q Consensus 339 -------~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~ 411 (433)
.+++|++||++|+||+.+++...+..++|+|++|+...|||++|++.+++++.|+|+++.||+..+.|+|||.
T Consensus 334 ~g~~~~~~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~ 413 (424)
T 2qfp_A 334 NGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFF 413 (424)
T ss_dssp SCCCSCEECTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEE
T ss_pred CCccccccCCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEE
Confidence 2467999999999999887654576788999999999999999999999999999999889986668999999
Q ss_pred eCCC-CCC
Q 013955 412 SLVS-SGC 418 (433)
Q Consensus 412 ~~~~-~~~ 418 (433)
|+.. +.|
T Consensus 414 ~~~~~~~~ 421 (424)
T 2qfp_A 414 NRHWYPVD 421 (424)
T ss_dssp CTTTCCCC
T ss_pred eccccccc
Confidence 9964 544
No 3
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.9e-37 Score=298.06 Aligned_cols=252 Identities=17% Similarity=0.215 Sum_probs=187.3
Q ss_pred CCeEEEEEecCCCCCChHHHH-----HHhhcCCCceEEccccccccccc---hhhHHH-hhhhhhhh--hhCCCceeccC
Q 013955 135 FPITFAVAGDLGQTGWTKSTL-----DHIGQCKYDVHLLPGDLSYADYM---QHRWDT-FGELVQPL--ASARPWMVTQG 203 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~~l-----~~i~~~~pd~vl~~GD~~~~~~~---~~~w~~-~~~~~~~l--~~~iP~~~v~G 203 (433)
.++||+++||+|.+...+..+ +.+++.+|||||++||++|.+.. ...|.. |.+....+ ...+||++++|
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~~~pd~vl~~GD~~y~G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~vlG 81 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFIDGVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTVLG 81 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHHTTCCEEEECSCSBTTCCCSTTCTHHHHHTTTTSCCGGGTTCSEEEECCC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhhcCCCEEEECCCcccCCCCcCccHHHHHHHHHHhhhhhhhhCCCEEEeCC
Confidence 579999999999765444322 22347899999999999998431 345653 33444433 34599999999
Q ss_pred CCcCCCCCcccccc-------------------cccccccccCCCCCCCCCCceEEE----Ee---------C----eEE
Q 013955 204 NHEKESIPLIMDAF-------------------QSYNARWKMPFEESGSNSNLYYSF----DV---------A----GAH 247 (433)
Q Consensus 204 NHD~~~~~~~~~~~-------------------~~y~~~~~~p~~~~~~~~~~~ys~----~~---------g----~v~ 247 (433)
|||+.+...++..+ .....+|.||. .||++ .. | .++
T Consensus 82 NHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~~~v~ 153 (342)
T 3tgh_A 82 TRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKDLAAA 153 (342)
T ss_dssp HHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEEEEEE
T ss_pred CCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCCceEE
Confidence 99998754432222 12456788884 67765 32 3 499
Q ss_pred EEEEcccCCCC----------CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCC
Q 013955 248 LIMLGSYADYD----------EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASV 317 (433)
Q Consensus 248 fi~lds~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~V 317 (433)
||+|||..... ...+|++||+++|+. ++|+||++|||+++... .+....+++.|+++|++++|
T Consensus 154 fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~--~~~~~~l~~~l~~ll~~~~V 226 (342)
T 3tgh_A 154 FIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGY--SRGSSYLAYYLLPLLKDAEV 226 (342)
T ss_dssp EEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSST--TCCCHHHHHHTHHHHHHTTC
T ss_pred EEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCC--CCCcHHHHHHHHHHHHHcCC
Confidence 99999964321 125899999999943 47999999999998764 23344678999999999999
Q ss_pred cEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEe
Q 013955 318 DLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRN 397 (433)
Q Consensus 318 dlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~ 397 (433)
+++|+||+|.|+|..+ +|+.||++|+||...+. .. ..++|+.|+...+||.++++. ++.++++|+++
T Consensus 227 dlvlsGH~H~~~~~~~--------~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l~v~-~~~l~~~~~~~ 293 (342)
T 3tgh_A 227 DLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVHELS-NNGIVTKFVSS 293 (342)
T ss_dssp CEEEECSSSSEEEEEE--------TTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEEEEE-TTEEEEEEEET
T ss_pred CEEEECCCcceeEEee--------CCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEEEEE-CCEEEEEEEEC
Confidence 9999999999999974 47999999998875431 11 235688898889999999995 56899999985
Q ss_pred CCCCCeeeeEEEEEeCCCC
Q 013955 398 DDDEPVRSDQLWITSLVSS 416 (433)
Q Consensus 398 ~~g~~~v~d~f~i~~~~~~ 416 (433)
.+|+ |+|+|+|.|....
T Consensus 294 ~~G~--vld~~~i~k~~~~ 310 (342)
T 3tgh_A 294 KKGE--VIYTHKLNIKKKK 310 (342)
T ss_dssp TTTE--EEEEEEEECCCCS
T ss_pred CCCc--EEEEEEEECCCCc
Confidence 5775 9999999998544
No 4
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=2.5e-35 Score=302.57 Aligned_cols=354 Identities=19% Similarity=0.225 Sum_probs=231.0
Q ss_pred EEecC--CCcEEEEEEcCCCC---------CCcEEEEeccCCC--CCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 48 ISLAG--DSHMRVTWITDDES---------SPSVVEYGTSPGG--YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 48 l~~~~--~~~~~i~W~t~~~~---------~~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
++.+. ++++ |.|...... ....|+|....+. ......|.... ....+++|+|.|+||+|||.
T Consensus 13 vasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a----~~~~~~t~~v~v~gL~P~t~ 87 (527)
T 2yeq_A 13 VASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMA----KPSLAHSVHVEADGLEPNKV 87 (527)
T ss_dssp EEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEE----CGGGTTEEEEEECSCCTTCE
T ss_pred ccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEe----cCCCceEEEeecCCcCCCCE
Confidence 34444 5666 678876321 2346666655433 23445554322 13578999999999999999
Q ss_pred EEEEecc---cCCeeEEECCCC----CCCeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchh-------
Q 013955 115 YFYRCGR---QGPEFEFKTPPA----QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQH------- 180 (433)
Q Consensus 115 Y~Y~v~~---~s~~~~F~T~p~----~~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~------- 180 (433)
|+||++. .|.+++|+|+|. ..+++|+++||.+.......+++.+.+.+|||+|++||++|.++...
T Consensus 88 Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~~~D~vlhlGD~iY~d~~~~~~~~~~~ 167 (527)
T 2yeq_A 88 YYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKEKLDLVFHLGDYIYEYGPNEYVSKTGN 167 (527)
T ss_dssp EEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTSCCSEEEECSCSSCCCCTTSSCCTTCC
T ss_pred EEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhcCCCEEEecCCcccCCCCCcccccccc
Confidence 9999975 378999999986 26899999999876433346788888889999999999999875321
Q ss_pred ----------hHHHhh---------hhhhhhhhCCCceeccCCCcCCCCCccc--c------cc-----ccccccc-ccC
Q 013955 181 ----------RWDTFG---------ELVQPLASARPWMVTQGNHEKESIPLIM--D------AF-----QSYNARW-KMP 227 (433)
Q Consensus 181 ----------~w~~~~---------~~~~~l~~~iP~~~v~GNHD~~~~~~~~--~------~~-----~~y~~~~-~~p 227 (433)
.++.|. ..++.+.+.+|++.++||||+.++.... . .| ..+..+| .+|
T Consensus 168 ~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P 247 (527)
T 2yeq_A 168 VRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMP 247 (527)
T ss_dssp CSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSC
T ss_pred cccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHhCC
Confidence 111211 1245566779999999999997542110 0 00 1222233 344
Q ss_pred CCC----CCCCCCceEEEEeCe-EEEEEEcccCCCC----------------------CChHHHHHHHHHhhccccCCCC
Q 013955 228 FEE----SGSNSNLYYSFDVAG-AHLIMLGSYADYD----------------------EYSDQYRWLKDDLSKVDRKKTP 280 (433)
Q Consensus 228 ~~~----~~~~~~~~ys~~~g~-v~fi~lds~~~~~----------------------~~~~Q~~WL~~~L~~~~~~~~~ 280 (433)
... .+.....||+|++|+ ++|++||+..... .+.+|++||+++|+++ +++
T Consensus 248 ~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~s---~a~ 324 (527)
T 2yeq_A 248 LRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGSS---TAH 324 (527)
T ss_dssp CCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHHC---CSS
T ss_pred CCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhcC---CCC
Confidence 321 122347899999999 9999999964211 3589999999999986 578
Q ss_pred eEEEEecccccCCCCCC--------C--CCChhHHHHHHHHHHHcCCc--EEEecCcccceeeeeccCCccCCC----cc
Q 013955 281 WLLVLLHVPWYNSNEAH--------Q--GEGDGMMAIMEPLLYAASVD--LVLAGHVHAYERSIRVNNGKPDPC----GA 344 (433)
Q Consensus 281 ~~iv~~H~P~~~~~~~~--------~--~~~~~~~~~l~~l~~~~~Vd--lvlsGH~H~y~r~~~~~~~~~~~~----g~ 344 (433)
|+||+.|+|++...... . ..-...|+.|+++|.+++|+ ++|+||+|.+++....... .+++ ++
T Consensus 325 W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~-~~p~~~~~~~ 403 (527)
T 2yeq_A 325 WNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDF-EKTSSKIFGA 403 (527)
T ss_dssp EEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESST-TCTTSCEEEE
T ss_pred eEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccc-cCCCCCceEE
Confidence 99999999998754211 0 01125789999999999985 9999999999998643221 1222 44
Q ss_pred EEEEECC--CCCCCccc---ccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCC-----CCCeeeeEEEEEe
Q 013955 345 VYITIGD--GGNKEGLA---RKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDD-----DEPVRSDQLWITS 412 (433)
Q Consensus 345 ~yi~~G~--gG~~~~~~---~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~-----g~~~v~d~f~i~~ 412 (433)
-+++++- ||...... ..+...+|. ..|.+...||.+|+|. .+.++.+|+..++ +.....-+|++..
T Consensus 404 ef~~ssi~s~~~g~~~~~~~~~~~~~np~-~~~~~~~~Gy~~v~vt-~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~ 479 (527)
T 2yeq_A 404 EFVGTSITSGGNGADKRADTDQILKENPH-IQFFNDYRGYVRCTVT-PHQWKADYRVMPFVTEPGAAISTRASFVYQK 479 (527)
T ss_dssp EEECCCSSTTCSCBSBCTTHHHHHHHCTT-EEEEEBCEEEEEEEEE-TTEEEEEEEEESCSSSSCCCCEEEEEEEECS
T ss_pred EEEcCCeeCCCCcccchhhhhhhhhcCCc-ceeeeCCCCEEEEEEe-ccEEEEEEEEeCCccCCCCcceeeeEEEEeC
Confidence 4554332 11111000 001112344 3455578999999995 4679999987753 2223355666644
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=100.00 E-value=2.6e-32 Score=262.69 Aligned_cols=260 Identities=19% Similarity=0.292 Sum_probs=175.8
Q ss_pred CCCCCCCeEEEEEecCCCCCC-------h---HHHHHH-hhcCCCceEEccccccccccch----hhHHHh-hhhhhhh-
Q 013955 130 TPPAQFPITFAVAGDLGQTGW-------T---KSTLDH-IGQCKYDVHLLPGDLSYADYMQ----HRWDTF-GELVQPL- 192 (433)
Q Consensus 130 T~p~~~~~~f~~~gD~~~~~~-------~---~~~l~~-i~~~~pd~vl~~GD~~~~~~~~----~~w~~~-~~~~~~l- 192 (433)
|+| ..++||+++||+|.... . .+.+.. ++..+|||||++||++|..+.. .+|... .+.+...
T Consensus 1 t~~-~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~ 79 (313)
T 1ute_A 1 TAP-TPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPS 79 (313)
T ss_dssp --C-CCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHHHCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGG
T ss_pred CCC-CCceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHhcCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchh
Confidence 344 57899999999997642 1 122332 4467999999999998865431 233322 2222211
Q ss_pred hhCCCceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEe------CeEEEEEEcccCC----------
Q 013955 193 ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDV------AGAHLIMLGSYAD---------- 256 (433)
Q Consensus 193 ~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~------g~v~fi~lds~~~---------- 256 (433)
...+|+++++||||..........+.....+|.+| ..||++.+ ++++||+||+...
T Consensus 80 l~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ 151 (313)
T 1ute_A 80 LRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQ 151 (313)
T ss_dssp GTTCCEEECCCHHHHHSCHHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTC
T ss_pred hcCCCEEEECCCCccCCCccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCcccccc
Confidence 12589999999999854321111122222344444 46888887 5899999998531
Q ss_pred -------CCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 257 -------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 257 -------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
.....+|++||++.|++.. .+|+||++|+|++..... +.....++.|.++|++++|+++|+||+|.++
T Consensus 152 ~~~~~~~~~~~~~q~~wL~~~L~~~~---~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~~ 226 (313)
T 1ute_A 152 QPERPRNLALARTQLAWIKKQLAAAK---EDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQ 226 (313)
T ss_dssp SCCSCSCHHHHHHHHHHHHHHHHHCC---CSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEE
T ss_pred ccCCccccchHHHHHHHHHHHHHhCC---CCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhhh
Confidence 0124799999999999873 479999999999876531 2233467889999999999999999999998
Q ss_pred eeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEec----cccEEEEEEEcCceEEEEEEEeCCCCCeee
Q 013955 330 RSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREA----SFGHGELKIVNSTHAFWSWHRNDDDEPVRS 405 (433)
Q Consensus 330 r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~----~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~ 405 (433)
+..+ .+|+.||++|++|.............+.+..|... ..||.+|++. ++.++++|++. +|+ ++
T Consensus 227 ~~~~-------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~-~~~~~~~~~~~-~g~--~~ 295 (313)
T 1ute_A 227 YLQD-------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSVTYIEA-SGK--SL 295 (313)
T ss_dssp EEEC-------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEEEEEET-TSC--EE
T ss_pred hccC-------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEE-cCEEEEEEEcC-CCc--EE
Confidence 8863 35899999999886432111000011233445433 3799999995 56799999985 665 99
Q ss_pred eEEEEEeCC
Q 013955 406 DQLWITSLV 414 (433)
Q Consensus 406 d~f~i~~~~ 414 (433)
|+|+|.|..
T Consensus 296 ~~~~l~~~~ 304 (313)
T 1ute_A 296 FKTKLPRRA 304 (313)
T ss_dssp EEEEECCCC
T ss_pred EEEEecccc
Confidence 999998874
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.92 E-value=2.6e-24 Score=208.66 Aligned_cols=237 Identities=17% Similarity=0.152 Sum_probs=161.9
Q ss_pred CCCeEEEEEecCCCCCC-------------hHHHHHHhhc--CCCceEEccccccccccchhhHHHhhhhhhhhhh--CC
Q 013955 134 QFPITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--AR 196 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~i 196 (433)
..++||++++|+|.... .+++++.+.+ .++|+||++||+++.+.. ..|+.+.+.++.+.. .+
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~l~~l~~~~~~ 101 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEP-AAYRKLRGLVEPFAAQLGA 101 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCCH-HHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHHHhhcCC
Confidence 67899999999996421 1335555655 799999999999986653 566666667776633 58
Q ss_pred CceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC----CCChHHHHHHHHHhh
Q 013955 197 PWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLS 272 (433)
Q Consensus 197 P~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~Q~~WL~~~L~ 272 (433)
|++.++||||+.. .+. ..+... .......+|++++++++|++||+.... ....+|++||++.|+
T Consensus 102 pv~~v~GNHD~~~------~~~---~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~ 169 (330)
T 3ib7_A 102 ELVWVMGNHDDRA------ELR---KFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELA 169 (330)
T ss_dssp EEEECCCTTSCHH------HHH---HHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHHHHHHTT
T ss_pred CEEEeCCCCCCHH------HHH---HHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHHHHHHHH
Confidence 9999999999831 111 111100 011235789999999999999996532 246899999999999
Q ss_pred ccccCCCCeEEEEecccccCCCCCCC-CCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECC
Q 013955 273 KVDRKKTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGD 351 (433)
Q Consensus 273 ~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~ 351 (433)
.... ..+|+++|||++....... ......++.+.+++++++++++|+||+|...... -+|+.++++|+
T Consensus 170 ~~~~---~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~--------~~g~~~~~~gs 238 (330)
T 3ib7_A 170 TPAP---DGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT--------FVGIPVSVASA 238 (330)
T ss_dssp SCCT---TCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------ETTEEEEECCC
T ss_pred hccc---CCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce--------ECCEEEEecCc
Confidence 8753 2378899998876532211 1111245789999999999999999999987543 24788888887
Q ss_pred CCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCC
Q 013955 352 GGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDD 400 (433)
Q Consensus 352 gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g 400 (433)
.+... ....+.. .........||.++++.+ ..+.++++..+.+
T Consensus 239 ~~~~~----~~~~~~g-~~~~~~~~~gy~iv~i~~-~~~~~~~v~~~~~ 281 (330)
T 3ib7_A 239 TCYTQ----DLTVAAG-GTRGRDGAQGCNLVHVYP-DTVVHSVIPLGGG 281 (330)
T ss_dssp SSCEE----CTTSCTT-CCCEESCSCEEEEEEECS-SCEEEEEEECSCC
T ss_pred ceecc----CCCCCCc-ceeccCCCCceEEEEEEC-CCeEEEEeccCCC
Confidence 66431 1111111 112234457899999965 4588999986543
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.90 E-value=8e-23 Score=192.81 Aligned_cols=230 Identities=14% Similarity=0.135 Sum_probs=151.3
Q ss_pred eEEEEEecCCCCCC-------------hHHHHHHhhc--CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceec
Q 013955 137 ITFAVAGDLGQTGW-------------TKSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVT 201 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-------------~~~~l~~i~~--~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v 201 (433)
+||++++|+|.... .+++++.+.+ .++|+||++||+++.+.. ..|+.+.+.++.+ .+|++.+
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~~~l~~l--~~p~~~v 77 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGRP-EEYQVARQILGSL--NYPLYLI 77 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCCH-HHHHHHHHHHTTC--SSCEEEE
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHhc--CCCEEEE
Confidence 58999999997641 1334455554 368999999999986543 4555555555554 4899999
Q ss_pred cCCCcCCCCCccccccc-cccccc-ccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC----CCChHHHHHHHHHhhccc
Q 013955 202 QGNHEKESIPLIMDAFQ-SYNARW-KMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY----DEYSDQYRWLKDDLSKVD 275 (433)
Q Consensus 202 ~GNHD~~~~~~~~~~~~-~y~~~~-~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~----~~~~~Q~~WL~~~L~~~~ 275 (433)
+||||... .+. .+...| ..+. . .+..+|+++.++++|++||+.... ....+|++||++.|++.+
T Consensus 78 ~GNHD~~~------~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~~~ 147 (274)
T 3d03_A 78 PGNHDDKA------LFLEYLQPLCPQLGS--D--ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFEGG 147 (274)
T ss_dssp CCTTSCHH------HHHHHHGGGSGGGCS--C--GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCHH------HHHHHhhhhhcCccc--C--CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHHHHhCC
Confidence 99999842 111 111111 1111 0 023578899999999999996432 235899999999999862
Q ss_pred cCCCCeEEEEecccccCCCCCCCC-CChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEEC-CC
Q 013955 276 RKKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIG-DG 352 (433)
Q Consensus 276 ~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G-~g 352 (433)
.+++|+++|+|++........ ......+.+.++++++ +|+++|+||+|..+.... +|+.+++++ ++
T Consensus 148 ---~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~~--------~g~~~~~~pg~~ 216 (274)
T 3d03_A 148 ---DKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQY--------RQALISTLPGTV 216 (274)
T ss_dssp ---TSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEEE--------TTEEEEECCCSS
T ss_pred ---CCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhheE--------CCEEEEEcCCcc
Confidence 347999999999875432110 1112346888999999 899999999999876541 355555544 33
Q ss_pred CCCCcccccCCCCCCCc-ceeEeccccEEEEEEEcCceEEEEEEEeC
Q 013955 353 GNKEGLARKYKNPQPDW-SVFREASFGHGELKIVNSTHAFWSWHRND 398 (433)
Q Consensus 353 G~~~~~~~~~~~~~p~~-~~~~~~~~G~~~l~v~~~~~l~~~~~~~~ 398 (433)
+... .. .+.+ ..+.....||..+++.++ .+++++++..
T Consensus 217 ~~~~-----~~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~~ 255 (274)
T 3d03_A 217 HQVP-----YC--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSLA 255 (274)
T ss_dssp CBCC-----CC--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEECS
T ss_pred eeec-----cC--CCccccccccCCCceEEEEEeCC-cEEEEEEecC
Confidence 3321 11 1111 234445689999999665 6889998864
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.90 E-value=5.7e-23 Score=197.97 Aligned_cols=225 Identities=17% Similarity=0.143 Sum_probs=148.1
Q ss_pred CCCeEEEEEecCCCCCC--------------------hHHHHHHhhcCCCceEEccccccccccchh--hHHHhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW--------------------TKSTLDHIGQCKYDVHLLPGDLSYADYMQH--RWDTFGELVQP 191 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------------~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~--~w~~~~~~~~~ 191 (433)
...+||++++|+|.... .+++++.+.+.+||+||++||+++...... .++.+....+.
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~ 82 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAE 82 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHH
Confidence 45799999999987642 123344455689999999999998654211 13333333333
Q ss_pred hhh-CCCceeccCCCcCCCCCcccccccccccccc-------------cCCCCCCCCCCceEEEEe-CeEEEEEEcccCC
Q 013955 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWK-------------MPFEESGSNSNLYYSFDV-AGAHLIMLGSYAD 256 (433)
Q Consensus 192 l~~-~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~-------------~p~~~~~~~~~~~ys~~~-g~v~fi~lds~~~ 256 (433)
+.. .+|+++++||||...... ..+...+. +|. .+..||+|+. ++++||+||+...
T Consensus 83 l~~~~~p~~~v~GNHD~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ld~~~~ 152 (322)
T 2nxf_A 83 LDACSVDVHHVWGNHEFYNFSR-----PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVLLDAYDL 152 (322)
T ss_dssp HHTTCSEEEECCCHHHHHHCCH-----HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEECCTTSB
T ss_pred HHhcCCcEEEecCCCCcccCCH-----HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEEEcCcee
Confidence 332 489999999999842111 11112221 121 1357899998 8999999998541
Q ss_pred ----------------------------------------------CCCChHHHHHHHHHhhccccCCCCeEEEEecccc
Q 013955 257 ----------------------------------------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (433)
Q Consensus 257 ----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (433)
.....+|++||++.|++++++ ..++||++|+|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p~ 231 (322)
T 2nxf_A 153 SVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPV 231 (322)
T ss_dssp CSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCC
T ss_pred cccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccCC
Confidence 012378999999999987532 246899999999
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCc
Q 013955 291 YNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDW 369 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~ 369 (433)
+........ .....+.+.++++++ +|+++|+||+|.+++... .+|+.|+++|+.- .. +
T Consensus 232 ~~~~~~~~~-~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-------~~g~~~i~~~~~~-------~~--~---- 290 (322)
T 2nxf_A 232 HPCAADPIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-------SSGAQHITLEGVI-------ET--P---- 290 (322)
T ss_dssp CTTSSCGGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC-------TTSCEEEECCCGG-------GC--C----
T ss_pred CCCCCCccc-cccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec-------cCCceEEEecchh-------hC--C----
Confidence 876532100 111357899999999 799999999999987652 2478888766541 00 1
Q ss_pred ceeEeccccEEEEEEEcCceEEEEEE
Q 013955 370 SVFREASFGHGELKIVNSTHAFWSWH 395 (433)
Q Consensus 370 ~~~~~~~~G~~~l~v~~~~~l~~~~~ 395 (433)
....||..+++.+ ..++++.+
T Consensus 291 ----~~~~~y~~v~~~~-~~~~~~~~ 311 (322)
T 2nxf_A 291 ----PHSHAFATAYLYE-DRMVMKGR 311 (322)
T ss_dssp ----TTSCEEEEEEECS-SEEEEEEE
T ss_pred ----CCCCcEEEEEEEC-CeEEEEec
Confidence 1246889999854 45666654
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.84 E-value=1.8e-19 Score=181.98 Aligned_cols=196 Identities=16% Similarity=0.181 Sum_probs=127.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------------h----HHHHHHhhcCCCceEEccccccccccchhhHHHhh
Q 013955 134 QFPITFAVAGDLGQTGW-----------------------T----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFG 186 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------------~----~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~ 186 (433)
..++||++++|+|.... . +.+++.+.+.+||+||++||+++.+.. ..++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~-~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEK-TSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSSCCH-HHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH-HHHHHHH
Confidence 57899999999997532 1 223444557789999999999986653 3455666
Q ss_pred hhhhhhhh-CCCceeccCCCcCCCCCccc-c----------cccccccccccCCC-CC---CCCCCceEEEEeCeEEEEE
Q 013955 187 ELVQPLAS-ARPWMVTQGNHEKESIPLIM-D----------AFQSYNARWKMPFE-ES---GSNSNLYYSFDVAGAHLIM 250 (433)
Q Consensus 187 ~~~~~l~~-~iP~~~v~GNHD~~~~~~~~-~----------~~~~y~~~~~~p~~-~~---~~~~~~~ys~~~g~v~fi~ 250 (433)
+.++.+.. .+|++.++||||........ . ....|...|..... .. ......|+.+..++++|++
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~ 195 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLM 195 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEEE
Confidence 66666643 58999999999995421100 0 01112222211000 00 0011234444578999999
Q ss_pred EcccCC------------CCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCC-CChhHHHHHHHHHHHcCC
Q 013955 251 LGSYAD------------YDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG-EGDGMMAIMEPLLYAASV 317 (433)
Q Consensus 251 lds~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~~V 317 (433)
||+... .....+|++||++.|++.+.. ...+|+++|+|++........ ......+.+.+++++++|
T Consensus 196 Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~~-~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~~~v 274 (443)
T 2xmo_A 196 LDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKN-GAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAM 274 (443)
T ss_dssp CCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHHT-TCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHHTTC
T ss_pred eeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHHc-CCeEEEEECCCCcccccccccccccccHHHHHHHHHHcCC
Confidence 999642 123589999999999987542 245899999999865432111 111246789999999999
Q ss_pred cEEEecCcccceee
Q 013955 318 DLVLAGHVHAYERS 331 (433)
Q Consensus 318 dlvlsGH~H~y~r~ 331 (433)
+++|+||+|.....
T Consensus 275 ~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 275 DFSLSGHIHTQNIR 288 (443)
T ss_dssp CEEEECSSCSCEEE
T ss_pred eEEEECCcccCchh
Confidence 99999999997654
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.65 E-value=2.9e-16 Score=143.43 Aligned_cols=170 Identities=10% Similarity=-0.035 Sum_probs=99.7
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
++||+++||+|.+.. .+++++.+.+.+||+||++||+++.+.....+..+.+.++.+ .+|+++++||||....
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~~---- 78 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAYVPGPQDAPIW---- 78 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEEECCTTSCSHH----
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEEECCCCCchhH----
Confidence 589999999997532 133444455569999999999997653333333343333332 4799999999998421
Q ss_pred cccccccccc----ccCCCCCCCCCCceEEEEeC-eEEEEEEcccC--CCCCChHH--------HHHHHHHhhccccCCC
Q 013955 215 DAFQSYNARW----KMPFEESGSNSNLYYSFDVA-GAHLIMLGSYA--DYDEYSDQ--------YRWLKDDLSKVDRKKT 279 (433)
Q Consensus 215 ~~~~~y~~~~----~~p~~~~~~~~~~~ys~~~g-~v~fi~lds~~--~~~~~~~Q--------~~WL~~~L~~~~~~~~ 279 (433)
......+ ..|... ..... .+.++ +++|+.++... .+....+| .+|+++.|++...
T Consensus 79 ---~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 148 (228)
T 1uf3_A 79 ---EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKD--- 148 (228)
T ss_dssp ---HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGSCS---
T ss_pred ---HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHHhCCC---
Confidence 1011110 001000 00011 24456 78999887421 11112222 2444555555432
Q ss_pred CeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcc
Q 013955 280 PWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (433)
Q Consensus 280 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 326 (433)
.+.|+++|+|++...... . ....+.+++++++++++++||+|
T Consensus 149 ~~~il~~H~p~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 149 YPKIFLFHTMPYHKGLNE--Q---GSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp CCEEEEESSCBCBTTTBT--T---SBHHHHHHHHHHCCSEEEECCSS
T ss_pred CCeEEEEccCcccCCccc--c---CHHHHHHHHHHhCCCEEEEcccc
Confidence 358999999987642111 1 12467778888999999999999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.61 E-value=2.4e-15 Score=140.49 Aligned_cols=181 Identities=10% Similarity=0.093 Sum_probs=102.2
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhh-----------------------HHHhhhhhhh
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHR-----------------------WDTFGELVQP 191 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~-----------------------w~~~~~~~~~ 191 (433)
++||+++||+|.+.. ..++++.+...++|+||++||+++....... .+.+.+.++.
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~ 84 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEKQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFFRE 84 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHHCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhcCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHHHH
Confidence 589999999997643 3455666667799999999999976532110 0223344455
Q ss_pred hhh-CCCceeccCCCcCCCCCcccccccccccccc-cCCCCCCCCCCceEEEEeCeEEEEEEcccCCC-CCChHHHH---
Q 013955 192 LAS-ARPWMVTQGNHEKESIPLIMDAFQSYNARWK-MPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-DEYSDQYR--- 265 (433)
Q Consensus 192 l~~-~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~-~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-~~~~~Q~~--- 265 (433)
+.. .+|++.++||||..... .+........ .|. ...-.....+.+++++|++++..... ....+++.
T Consensus 85 l~~~~~pv~~v~GNHD~~~~~----~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 157 (260)
T 2yvt_A 85 IGELGVKTFVVPGKNDAPLKI----FLRAAYEAETAYPN---IRVLHEGFAGWRGEFEVIGFGGLLTEHEFEEDFVLKYP 157 (260)
T ss_dssp HHTTCSEEEEECCTTSCCHHH----HHHHHHHTTTTCTT---EEECSSEEEEETTTEEEEEECSEEESSCCBSSSSCEEE
T ss_pred HHhcCCcEEEEcCCCCchhhh----hHHHHhhhccCCcc---eEEecCcceEEECCEEEEecCCCcCCCCcCHHHHhhcc
Confidence 543 48999999999984211 0000100000 000 00001112367889999999753210 11122222
Q ss_pred -HHH----HHhhccccCCCCeEEEEecccccCCCCCCC--CCChhHHHHHHHHHHHcCCcEEEecCcc
Q 013955 266 -WLK----DDLSKVDRKKTPWLLVLLHVPWYNSNEAHQ--GEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (433)
Q Consensus 266 -WL~----~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~~~~~~l~~l~~~~~VdlvlsGH~H 326 (433)
|+. +.|++.. + ...|+++|+|++....... .........+.+++++++++++++||+|
T Consensus 158 ~~~~~~~l~~l~~~~--~-~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 158 RWYVEYILKFVNELK--P-RRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp HHHHHHHGGGGGGSC--C-CEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred hhhHHHHHHHHHhcC--C-CCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 443 3333332 2 2469999999875311110 0001122567788888999999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.58 E-value=5.3e-15 Score=143.80 Aligned_cols=244 Identities=12% Similarity=0.103 Sum_probs=127.9
Q ss_pred CCCeEEEEEecCCCC----CC-------------hHHHHHHhhcCCCceEEcccc-ccccccch-hhHHHhhhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQT----GW-------------TKSTLDHIGQCKYDVHLLPGD-LSYADYMQ-HRWDTFGELVQPLAS 194 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~----~~-------------~~~~l~~i~~~~pd~vl~~GD-~~~~~~~~-~~w~~~~~~~~~l~~ 194 (433)
...+||++++|+|.+ .. .+.+++.+.+.+||+||++|| +++..... .....+.+.++.+..
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 467999999999966 21 123444455789999999999 77654432 223445566666643
Q ss_pred CCCceeccCCCcCCCCCcccccccccccc----cccCCCCCCCCCCceEEEEeCeEEEEEEcccCCC-------CCChHH
Q 013955 195 ARPWMVTQGNHEKESIPLIMDAFQSYNAR----WKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADY-------DEYSDQ 263 (433)
Q Consensus 195 ~iP~~~v~GNHD~~~~~~~~~~~~~y~~~----~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~-------~~~~~Q 263 (433)
.+|++.++||||... .. ....+... +.+..+. . ....+.++.+++.|++++..... ....+|
T Consensus 96 ~~pv~~i~GNHD~~~-~~---~~~~~l~~~g~nv~v~~~~--~-~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~~~~ 168 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-LK---LFGNFVTSISSDITFVMSF--E-PVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFF 168 (336)
T ss_dssp HSCEEECCC-------CH---HHHHHHHHHCSSEEECCSS--S-CEEEECTTSCEEEEEEECCC-------CCSSHHHHH
T ss_pred cCCEEEECCCCCccc-cc---cHHHHHHhcCCEEEEEecc--c-ccCceEEeCCCEEEEECCCCCHHHHHHHhhHHHHHH
Confidence 389999999999854 11 11111111 1111000 0 00011122367889888643221 112567
Q ss_pred HHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCc
Q 013955 264 YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCG 343 (433)
Q Consensus 264 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g 343 (433)
++|+.+.|...-.....++|+++|.|+....... +........+...+.+.++|++++||+|..+.... +
T Consensus 169 ~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~~-~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~~~---------~ 238 (336)
T 2q8u_A 169 LESRLNKLYEEALKKEDFAIFMGHFTVEGLAGYA-GIEQGREIIINRALIPSVVDYAALGHIHSFREIQK---------Q 238 (336)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEEESEETTCC---------CCCEECGGGSCTTSSEEEEESCSSCEEEEE---------T
T ss_pred HHHHHHHHHHhccCCCCCEEEEECccccCCCCCC-CccchhhcccCHHHccccCCEEEEccccCceEeCC---------C
Confidence 8999888865310123479999999987532110 00000000011123346899999999999876531 2
Q ss_pred cEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEE
Q 013955 344 AVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWI 410 (433)
Q Consensus 344 ~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i 410 (433)
+..+.+|+... ..+... ....||..+++.++...+++++.... . -+-.+.+
T Consensus 239 ~~i~y~GS~~~-----~s~~e~--------~~~~~~~lv~i~~~~~~~v~~i~~~~-r--~~~~~~~ 289 (336)
T 2q8u_A 239 PLTIYPGSLIR-----IDFGEE--------ADEKGAVFVELKRGEPPRYERIDASP-L--PLKTLYY 289 (336)
T ss_dssp TEEEECCCSSC-----CSGGGT--------TCCCEEEEEEEETTSCCEEEEEECCC-C--CEEEEEE
T ss_pred ccEEECCCCcC-----CCcccc--------CCCCEEEEEEEeCCCccEEEEEECCC-E--EEEEeec
Confidence 22233444311 111110 11468999999765557889998643 3 3444444
No 13
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.48 E-value=3.7e-12 Score=113.47 Aligned_cols=179 Identities=17% Similarity=0.154 Sum_probs=111.0
Q ss_pred CCeEEEEEecCCCCCC---hHHHHHH-hhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 135 FPITFAVAGDLGQTGW---TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~---~~~~l~~-i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
..+|++++||+|.... ..+.+.. +...++|+|+++||++.. .. .+.++.+ ..|++.++||||...
T Consensus 9 ~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~~~~d~ii~~GDl~~~----~~----~~~l~~~--~~~~~~v~GNhD~~~- 77 (192)
T 1z2w_A 9 DRMLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTK----ES----YDYLKTL--AGDVHIVRGDFDENL- 77 (192)
T ss_dssp --CEEEEECCCCBTTTCSSCCHHHHTTCCTTSCSEEEECSCCBSH----HH----HHHHHHH--CSEEEECCCTTCCCT-
T ss_pred cceEEEEEecCCCCccchhHHHHHHHHhccCCCCEEEEcCCCCCH----HH----HHHHHhc--CCCEEEEcCCcCccc-
Confidence 3489999999996532 2233333 345689999999999851 11 2223333 258999999999842
Q ss_pred CcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccc
Q 013955 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPW 290 (433)
Q Consensus 211 ~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~ 290 (433)
.+|. ...++. ..++|++.|.++
T Consensus 78 --------------~lp~---------~~~~~~-----------------------------------~~~~i~l~Hg~~ 99 (192)
T 1z2w_A 78 --------------NYPE---------QKVVTV-----------------------------------GQFKIGLIHGHQ 99 (192)
T ss_dssp --------------TSCS---------EEEEEE-----------------------------------TTEEEEEECSCC
T ss_pred --------------cCCc---------ceEEEE-----------------------------------CCEEEEEECCCc
Confidence 1221 111111 125788888554
Q ss_pred cCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcc
Q 013955 291 YNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWS 370 (433)
Q Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~ 370 (433)
+.... ..+.+..++++.+++++++||+|...... .+++.++..|+.+.+.. +. +.
T Consensus 100 ~~~~~--------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGS~~~~~~---~~-~~----- 154 (192)
T 1z2w_A 100 VIPWG--------DMASLALLQRQFDVDILISGHTHKFEAFE--------HENKFYINPGSATGAYN---AL-ET----- 154 (192)
T ss_dssp CCBTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE--------ETTEEEEECCCTTCCCC---SS-CS-----
T ss_pred CCCCC--------CHHHHHHHHHhcCCCEEEECCcCcCccEe--------ECCEEEEECCcccccCC---CC-Cc-----
Confidence 43211 12456677778899999999999865332 24788888888754321 00 00
Q ss_pred eeEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEEe
Q 013955 371 VFREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWITS 412 (433)
Q Consensus 371 ~~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~~ 412 (433)
....+|..+++.+ ..+++++++.+.++ ..+.++++.|
T Consensus 155 ---~~~~~y~il~~~~-~~~~~~~~~~~~~~-~~v~~~~~~~ 191 (192)
T 1z2w_A 155 ---NIIPSFVLMDIQA-STVVTYVYQLIGDD-VKVERIEYKK 191 (192)
T ss_dssp ---CCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEEC
T ss_pred ---CCCCcEEEEEEEC-CEEEEEEEEccCCE-EEEEEEEEcc
Confidence 1246889999865 46889999876664 4566766655
No 14
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.47 E-value=1.3e-12 Score=118.57 Aligned_cols=186 Identities=13% Similarity=0.141 Sum_probs=110.5
Q ss_pred CeEEEEEecCCCCCC---hHHHHHH-hhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCC
Q 013955 136 PITFAVAGDLGQTGW---TKSTLDH-IGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIP 211 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~---~~~~l~~-i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~ 211 (433)
.+|++++||+|.+.. ..+.+.+ +...++|+|+++||+++. ...+.++.+ ..|++.++||||.....
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~~~~D~vi~~GDl~~~--------~~l~~l~~~--~~~v~~V~GNHD~~~~~ 94 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLATDKINYVLCTGNVCSQ--------EYVEMLKNI--TKNVYIVSGDLDSAIFN 94 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHCTTCCEEEECSCCCCH--------HHHHHHHHH--CSCEEECCCTTCCSCCB
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhcCCCCEEEECCCCCCH--------HHHHHHHHc--CCCEEEecCCCcCcccc
Confidence 589999999997532 2233443 456789999999999851 122233333 26899999999985311
Q ss_pred cccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEeccccc
Q 013955 212 LIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWY 291 (433)
Q Consensus 212 ~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 291 (433)
. ...+.. .+| ....+ +. ..++|++.|.+++
T Consensus 95 ~----~~~~~~--~lp---------~~~~~-------------------------------~~----~~~~i~l~Hg~~~ 124 (215)
T 2a22_A 95 P----DPESNG--VFP---------EYVVV-------------------------------QI----GEFKIGLMHGNQV 124 (215)
T ss_dssp C----CGGGTB--CCC---------SEEEE-------------------------------EE----TTEEEEEECSTTS
T ss_pred c----ChhhHh--hCC---------ceEEE-------------------------------ec----CCeEEEEEcCCcc
Confidence 0 000000 000 00000 00 1247889996554
Q ss_pred CCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcce
Q 013955 292 NSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSV 371 (433)
Q Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~ 371 (433)
.... ..+.+..++++.+++++++||+|...... .+++.++..|+.+.+.. +. +.
T Consensus 125 ~~~~--------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~inpGS~~~~~~---~~-~~------ 178 (215)
T 2a22_A 125 LPWD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE--------KNGKLFLNPGTATGAFS---AL-TP------ 178 (215)
T ss_dssp SSTT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE--------ETTEEEEECCCSSCCCC---TT-ST------
T ss_pred CCCC--------CHHHHHHHHhhcCCCEEEECCcCCCccEe--------eCCEEEEECCcccccCC---CC-CC------
Confidence 3211 12456677778899999999999865432 24788888888754311 00 00
Q ss_pred eEeccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEEEE
Q 013955 372 FREASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLWIT 411 (433)
Q Consensus 372 ~~~~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~i~ 411 (433)
....+|..+++.+ ..+++++++.++++ ..+.+..+.
T Consensus 179 --~~~~~y~il~i~~-~~i~~~~~~~~~~~-~~v~~~~~~ 214 (215)
T 2a22_A 179 --DAPPSFMLMALQG-NKVVLYVYDLRDGK-TNVAMSEFS 214 (215)
T ss_dssp --TCCCEEEEEEEET-TEEEEEEEEEETTE-EEEEEEEEE
T ss_pred --CCCCcEEEEEEeC-CcEEEEEEEecCCe-EEEEEEEee
Confidence 1246889999865 46889998876664 335554443
No 15
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.43 E-value=5.3e-13 Score=125.84 Aligned_cols=204 Identities=15% Similarity=0.045 Sum_probs=112.1
Q ss_pred CCCeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 134 QFPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
...+||+++||+|..... + .-.++|+||++||+++.+.. .+.+.+.+.++.+. ..|+++++||||....+..
T Consensus 57 ~~~mri~~iSD~H~~~~~---l---~i~~~D~vi~aGDl~~~g~~-~e~~~~~~~L~~l~-~~~v~~V~GNHD~~~d~~~ 128 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG---I---QMPYGDILLHTGDFTELGLP-SEVKKFNDWLGNLP-YEYKIVIAGNHELTFDKEF 128 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT---C---CCCSCSEEEECSCCSSSCCH-HHHHHHHHHHHTSC-CSEEEECCCTTCGGGCHHH
T ss_pred CCCeEEEEEeeCCCCcch---h---ccCCCCEEEECCcccCCCCH-HHHHHHHHHHHhCC-CCeEEEEcCCcccccchhh
Confidence 567999999999976432 1 23589999999999986553 34444445554442 2468999999999533210
Q ss_pred cccc--ccccc--cc-ccCCC---CCCC-CCCce----EEEEeCeEEEEEEcccCCCCC---ChHHHHHHHHHhhccccC
Q 013955 214 MDAF--QSYNA--RW-KMPFE---ESGS-NSNLY----YSFDVAGAHLIMLGSYADYDE---YSDQYRWLKDDLSKVDRK 277 (433)
Q Consensus 214 ~~~~--~~y~~--~~-~~p~~---~~~~-~~~~~----ys~~~g~v~fi~lds~~~~~~---~~~Q~~WL~~~L~~~~~~ 277 (433)
.... ..+.. .+ ..+.. .... ..+.. -+..+++++|++..-...+.. ..++.+++.+.......
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~~~~~~~ip~- 207 (296)
T 3rl5_A 129 MADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQDSEVTVKGFRIYGAPWTPWFNGWGFNLPRGQSLLDKWNLIPE- 207 (296)
T ss_dssp HHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSSEEEEETTEEEEEECCBCC--CCTTBCCTTHHHHHHHTTSCT-
T ss_pred hhhhhcccccccccccccccchhhhHhhhcCCeEEecCCcEEECCEEEEEecCCCCCCCcCCCcchHHHHHHHHhhCCC-
Confidence 0000 00000 00 00000 0000 00111 135678899988543222211 12222344444443322
Q ss_pred CCCeEEEEecccccCCCCCCC-CCChhHHHHHHHHH-HHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQ-GEGDGMMAIMEPLL-YAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~-~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
...|+++|.|++...+... .......+.|.+.+ ++.+++++++||+|....... .+++.+|..|+-|..
T Consensus 208 --~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~-------~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 208 --GTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT-------DGYTTYINASTCTVS 278 (296)
T ss_dssp --TCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE-------CSSCEEEECBCSCTT
T ss_pred --CCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE-------ECCEEEEECCcCCcC
Confidence 2369999999987643210 00011235666666 689999999999998543221 247888988887654
No 16
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.43 E-value=2.6e-12 Score=127.08 Aligned_cols=229 Identities=13% Similarity=-0.048 Sum_probs=120.6
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHhhcCCCceEEccccccccccc-hhhHHHhhhhhhhhhh-CCC
Q 013955 134 QFPITFAVAGDLGQTGW--------------TKSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARP 197 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~l~~i~~~~pd~vl~~GD~~~~~~~-~~~w~~~~~~~~~l~~-~iP 197 (433)
..++||++++|+|.+.. ...+++.+...+||+||++||+++.... ...+..+.+.++.+.. .+|
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~~~p 97 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIK 97 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 67899999999997642 1234445567899999999999876533 2234455666666654 489
Q ss_pred ceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccC
Q 013955 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRK 277 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~ 277 (433)
++.++||||.............+...+..-. ...++..+-+++.+++++...... .....+||+..-.+..
T Consensus 98 v~~v~GNHD~~~~~~~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~~l~~~~~-- 168 (386)
T 3av0_A 98 VYIVAGNHEMPRRLGEESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKSK-REEMLDKLKNFESEAK-- 168 (386)
T ss_dssp EEECCCGGGSCSSTTSCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCSTT-HHHHHHHHHHHHHHHH--
T ss_pred EEEEcCCCCCCccccccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHHHhhhhcc--
Confidence 9999999998542110000000100010000 011111112568899998653321 1223334332111111
Q ss_pred CCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCc
Q 013955 278 KTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEG 357 (433)
Q Consensus 278 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~ 357 (433)
...++|+++|.|+........... +.. +. ++|++++||+|..+.. + ..++..+.+|+-...
T Consensus 169 ~~~~~Ill~H~~~~~~~~~~~~~~------~~~-l~--~~d~v~~GH~H~~~~~-~-------~~~~~i~ypGS~~~~-- 229 (386)
T 3av0_A 169 NYKKKILMLHQGINPYIPLDYELE------HFD-LP--KFSYYALGHIHKRILE-R-------FNDGILAYSGSTEII-- 229 (386)
T ss_dssp TCSSEEEEECCCCTTTSSSSCSSC------GGG-SC--CCSEEEECSCCSCEEE-E-------CSSSEEEECCCSSCC--
T ss_pred cCCCEEEEECcCccccCCCCcccC------HHH-hh--hCCeEEccCCCCCccc-c-------CCCceEEECCccccc--
Confidence 123589999998754211111000 111 11 3999999999987432 2 124555555543211
Q ss_pred ccccCCCCCCCcceeEeccccEEEEEEEcC--ceEEEEEEEe
Q 013955 358 LARKYKNPQPDWSVFREASFGHGELKIVNS--THAFWSWHRN 397 (433)
Q Consensus 358 ~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~--~~l~~~~~~~ 397 (433)
.+... ..+.....||..+++.++ ...+++++..
T Consensus 230 ---~~~e~----~~~~~~~kg~~lv~i~~~~~~~~~v~~i~l 264 (386)
T 3av0_A 230 ---YRNEY----EDYKKEGKGFYLVDFSGNDLDISDIEKIDI 264 (386)
T ss_dssp ---SGGGT----HHHHHHCSEEEEEECCSSSCCGGGEEEEEC
T ss_pred ---Ccchh----ccccCCCCEEEEEEEecCcCCCceEEEEEC
Confidence 11100 000112357888888541 3456788876
No 17
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.39 E-value=2.2e-12 Score=121.17 Aligned_cols=220 Identities=14% Similarity=0.034 Sum_probs=121.3
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCc
Q 013955 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~ 212 (433)
..+.|++++||+|.+.. ..++++.+...++|.|+++||+++.+... ....+.++. ..|++.++||||......
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~---~~~~~~v~GNhD~~~~~~ 82 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQ---LPITARVLGNWEDSLWHG 82 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHT---SCEEEECCCHHHHHHHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHc---cCCEEEEcCChHHHHHHh
Confidence 56899999999985422 23556666677999999999999755421 222223332 247899999999732100
Q ss_pred ccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccC
Q 013955 213 IMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYN 292 (433)
Q Consensus 213 ~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 292 (433)
....+..+. ....+.. . ...........++++||++.-......-....|++.|..+..
T Consensus 83 -------~~~~~~~~~-----~~~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~lvHg~p~~ 141 (270)
T 3qfm_A 83 -------VRKELDSTR-----PSQRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQIHRQFGDLTVGISHHLPDK 141 (270)
T ss_dssp -------HTTCSCTTS-----HHHHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSEEEEEETTEEEEEESSBTTB
T ss_pred -------hccccCCCc-----HHHHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCceEEEECCcEEEEEECCCCC
Confidence 000000000 0000000 0 000001123578899998654432111112467788876543
Q ss_pred CCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCccee
Q 013955 293 SNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVF 372 (433)
Q Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~ 372 (433)
... ..-......+.+..++.+.+++++|+||+|....... .+|..+|..|+.|.+.. ..+.++ .
T Consensus 142 ~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~~-------~~~~~~iNpGSvg~pr~-----~~~~~~--~- 205 (270)
T 3qfm_A 142 NWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRYG-------TGGQLIVNPGSIGQPFF-----LDAQLR--K- 205 (270)
T ss_dssp SSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEEC-------TTSCEEEEECCSSSCCC-----SSTTGG--G-
T ss_pred CCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHheec-------cCCEEEEECCCccCCCC-----CCcccc--C-
Confidence 211 1001111235677788888999999999996443221 25888999999887632 111000 0
Q ss_pred EeccccEEEEEEEcCceEEEEEEEe
Q 013955 373 REASFGHGELKIVNSTHAFWSWHRN 397 (433)
Q Consensus 373 ~~~~~G~~~l~v~~~~~l~~~~~~~ 397 (433)
.....|+++++.++...+++|++.
T Consensus 206 -~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 206 -DLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp -CCCEEEEEEEEETTEEEEEEEEEE
T ss_pred -CCCCEEEEEEecCCCceEEEEEEe
Confidence 113478899986654467888775
No 18
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.38 E-value=2.3e-11 Score=106.75 Aligned_cols=165 Identities=15% Similarity=0.109 Sum_probs=104.7
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
.+|++++||+|.... .+++++.+.. ++|+|+++||+.. +.++.+. .|++.++||||...
T Consensus 6 ~m~i~~isD~H~~~~~~~~~~~~~~~-~~d~i~~~GD~~~------------~~l~~l~--~~~~~v~GNhD~~~----- 65 (176)
T 3ck2_A 6 KQTIIVMSDSHGDSLIVEEVRDRYVG-KVDAVFHNGDSEL------------RPDSPLW--EGIRVVKGNMDFYA----- 65 (176)
T ss_dssp CEEEEEECCCTTCHHHHHHHHHHHTT-TSSEEEECSCCCS------------CTTCGGG--TTEEECCCTTCCST-----
T ss_pred CcEEEEEecCCCCHHHHHHHHHHhhc-CCCEEEECCCCch------------HHHHhhh--CCeEEecCcccchh-----
Confidence 489999999984311 1234444444 8999999999732 1122332 28999999999741
Q ss_pred ccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCC
Q 013955 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (433)
Q Consensus 215 ~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (433)
.+|. ...+. . ...+|++.|.|++...
T Consensus 66 ----------~~p~---------~~~~~-------------------------------~----~~~~i~~~Hg~~~~~~ 91 (176)
T 3ck2_A 66 ----------GYPE---------RLVTE-------------------------------L----GSTKIIQTHGHLFDIN 91 (176)
T ss_dssp ----------TCCS---------EEEEE-------------------------------E----TTEEEEEECSGGGTTT
T ss_pred ----------cCCc---------EEEEE-------------------------------E----CCeEEEEECCCccCCC
Confidence 1121 00000 0 1147899998876532
Q ss_pred CCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEe
Q 013955 295 EAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFRE 374 (433)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~ 374 (433)
. + .+.+.+++++++++++++||+|...... .+++.++..|+.|.+. +..+
T Consensus 92 ~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~--------~~~~~~inpGs~~~~~-------~~~~------- 141 (176)
T 3ck2_A 92 F-----N---FQKLDYWAQEEEAAICLYGHLHVPSAWL--------EGKILFLNPGSISQPR-------GTIR------- 141 (176)
T ss_dssp T-----C---SHHHHHHHHHTTCSEEECCSSCCEEEEE--------ETTEEEEEECCSSSCC-------TTCC-------
T ss_pred C-----C---HHHHHHHHHhcCCCEEEECCcCCCCcEE--------ECCEEEEECCCCCcCC-------CCCC-------
Confidence 1 1 1456777888999999999999865432 2478888888876431 1101
Q ss_pred ccccEEEEEEEcCceEEEEEEEeCCCCCeeeeEEE
Q 013955 375 ASFGHGELKIVNSTHAFWSWHRNDDDEPVRSDQLW 409 (433)
Q Consensus 375 ~~~G~~~l~v~~~~~l~~~~~~~~~g~~~v~d~f~ 409 (433)
..+|..+++.+ ..+++++++. +|+ ++.+++
T Consensus 142 -~~~y~il~~~~-~~~~v~~~~~-~~~--~~~~~~ 171 (176)
T 3ck2_A 142 -ECLYARVEIDD-SYFKVDFLTR-DHE--VYPGLS 171 (176)
T ss_dssp -SCCEEEEEECS-SEEEEEEECT-TSC--BCTTCC
T ss_pred -CCeEEEEEEcC-CEEEEEEEEE-CCE--Ecchhh
Confidence 25889999854 5688999985 454 555443
No 19
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.38 E-value=9.6e-13 Score=122.30 Aligned_cols=188 Identities=9% Similarity=-0.017 Sum_probs=102.8
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhh---cC--CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIG---QC--KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~---~~--~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
+|++++||+|.... ..++++.+. .. ++|++|++||+++.+.... ...+.+..+....|++.++||||....
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~~---~~~~~l~~l~~~~~~~~v~GNhD~~~~ 78 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYPK---EVIEVIKDLTKKENVKIIRGKYDQIIA 78 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCHH---HHHHHHHHHHHHSCEEEECCHHHHHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCHH---HHHHHHHhhHhhcCeeEEecchHHHhh
Confidence 68999999986422 234556665 55 8999999999997654221 222334444333689999999997321
Q ss_pred CcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcc--cCCCCCChHHHHHHHHHhhccccCCCCeEEEEecc
Q 013955 211 PLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGS--YADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (433)
Q Consensus 211 ~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds--~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (433)
. +...+. ... .. .. ++..... ... ........+|++||++........-....|++.|+
T Consensus 79 ~--------~~~~~~-~~~-~~----~~--~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~i~~~H~ 139 (252)
T 1nnw_A 79 M--------SDPHAT-DPG-YI----DK--LELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNEVFGVYG 139 (252)
T ss_dssp H--------SCTTCS-SSG-GG----GG--SSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEEEEEESS
T ss_pred c--------cccccC-Ccc-cc----cc--hhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcEEEEEcC
Confidence 0 000000 000 00 00 0000000 000 00001236788998764332211101247888898
Q ss_pred cccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 289 PWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
+++...... .......+.+..++.++ +++++++||+|...... -+++.++..|+.|.+
T Consensus 140 ~p~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------~~~~~~in~Gs~~~~ 198 (252)
T 1nnw_A 140 SPINPFDGE-VLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------TRYGRVVCPGSVGFP 198 (252)
T ss_dssp CSSCTTTCC-CCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE--------ETTEEEEEECCSSSC
T ss_pred CCCCCcccc-cCCCCCHHHHHHHHhcCCCCCEEEECCccccceEe--------cCCeEEEECCCccCC
Confidence 774322111 11111235678888888 99999999999865433 147888999887653
No 20
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.36 E-value=3.9e-12 Score=125.43 Aligned_cols=230 Identities=13% Similarity=0.120 Sum_probs=122.5
Q ss_pred eEEEEEecCCCCCC----h-------------HHHHHHhhcCCCceEEcccccc-ccccc-hhhHHHhhhhhhhhhhCCC
Q 013955 137 ITFAVAGDLGQTGW----T-------------KSTLDHIGQCKYDVHLLPGDLS-YADYM-QHRWDTFGELVQPLASARP 197 (433)
Q Consensus 137 ~~f~~~gD~~~~~~----~-------------~~~l~~i~~~~pd~vl~~GD~~-~~~~~-~~~w~~~~~~~~~l~~~iP 197 (433)
+||++++|+|.+.. . ..+++.+...+||+||++||++ +.... ...+..+.+.+..+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 58999999997653 1 2233444578999999999999 54332 2334555566666654499
Q ss_pred ceeccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEE--eC-eEEEEEEcccCCCC----CChHHHHHHHHH
Q 013955 198 WMVTQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFD--VA-GAHLIMLGSYADYD----EYSDQYRWLKDD 270 (433)
Q Consensus 198 ~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~--~g-~v~fi~lds~~~~~----~~~~Q~~WL~~~ 270 (433)
++.++||||..+.. -+..... .++.+.........+.+. .| .+.+..+.-..... ....+.+|+.+.
T Consensus 81 v~~i~GNHD~~~~~----~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~~l~~~ 154 (379)
T 3tho_B 81 VVVLPGNQDWKGLK----LFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESR 154 (379)
T ss_dssp EEECCCTTSCTTHH----HHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHHHHHHH
T ss_pred EEEEcCCCccccCc----ccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHHHHHHH
Confidence 99999999964310 0001100 011100000001122333 23 47777775432211 135678999988
Q ss_pred hh----ccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEE
Q 013955 271 LS----KVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVY 346 (433)
Q Consensus 271 L~----~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~y 346 (433)
|+ ...+ ...+.|+++|.++.........+.. ....+...+...++|+++.||.|..+... ++...
T Consensus 155 l~~~~~~~~~-~~~~~I~l~H~~v~g~~~~~~se~~-~~~~v~~~~~~~~~dyvalGH~H~~q~~~---------~~~~i 223 (379)
T 3tho_B 155 LNKLYEEALK-KEDFAIFMGHFTVEGLAGYAGIEQG-REIIINRALIPSVVDYAALGHIHSFREIQ---------KQPLT 223 (379)
T ss_dssp HHHHHHHHHT-CSSEEEEEEESCBSCCCC--------CSCCBCGGGSCTTSSEEEEESCSSCEEEE---------ETTEE
T ss_pred HHHHHHHhcC-CCCCeEEEEeccccCCccCCCCccc-cccccCHHHcCcCCCEEEcccccCCeEeC---------CCCcE
Confidence 87 2211 3346899999987543220000000 00111112224689999999999986442 11222
Q ss_pred EEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceEEEEEEE
Q 013955 347 ITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHAFWSWHR 396 (433)
Q Consensus 347 i~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l~~~~~~ 396 (433)
+-+|+ +.+ ..+... ...-||..+++.++...+++++.
T Consensus 224 ~y~GS---~~~--~~f~E~--------~~~k~~~lv~~~~~~~~~v~~i~ 260 (379)
T 3tho_B 224 IYPGS---LIR--IDFGEE--------ADEKGAVFVELKRGEPPRYERID 260 (379)
T ss_dssp EECCC---SSC--CSGGGS--------SSCCEEEEEECCSSSCCEEEEEE
T ss_pred EecCC---CCC--CCcccc--------cCCCEEEEEEEcCCCcceEEEeC
Confidence 33333 321 112111 11357888888665556778876
No 21
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.24 E-value=2.5e-10 Score=100.17 Aligned_cols=64 Identities=16% Similarity=0.067 Sum_probs=43.4
Q ss_pred CCCeEEEEEecCCCC---CChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 134 QFPITFAVAGDLGQT---GWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~---~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
.+.+|++++||+|.. ....+.++.+. .++|+|+++||+++. ...+.++.+ ..|++.++||||..
T Consensus 20 ~~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~GNhD~~ 86 (178)
T 2kkn_A 20 QGVKRFLLISDSHVPVRMASLPDEILNSL-KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVHGNMDYP 86 (178)
T ss_dssp --CEEEEEECCCCBTTTTCCCCHHHHHGG-GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECCCSSSCG
T ss_pred CcceEEEEEecccCCCCHHHHHHHHHHHh-cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEECCCCcH
Confidence 345899999999942 22345556555 789999999999862 122233333 26999999999973
No 22
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.20 E-value=3.9e-11 Score=107.07 Aligned_cols=153 Identities=15% Similarity=0.166 Sum_probs=89.8
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhc--CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCcee
Q 013955 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQ--CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~l~~i~~--~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~ 200 (433)
++++++||+|.+... +.+++.+.+ .++|+|+++||+++.+ ..+....+.++.+. .|++.
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l~--~~~~~ 76 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKALP--GRKIL 76 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHSS--SEEEE
T ss_pred cEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHCC--CCEEE
Confidence 679999999965332 122333443 5899999999999754 12223333444432 58999
Q ss_pred ccCCCcCCCCCcccccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCC
Q 013955 201 TQGNHEKESIPLIMDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTP 280 (433)
Q Consensus 201 v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 280 (433)
++||||... ..+...|. . +. +..||+ +. . .
T Consensus 77 v~GNhD~~~--------~~~~~~~~--------------~----------l~----------~~~~l~----~~---~-~ 106 (195)
T 1xm7_A 77 VMGNHDKDK--------ESLKEYFD--------------E----------IY----------DFYKII----EH---K-G 106 (195)
T ss_dssp ECCTTCCCH--------HHHTTTCS--------------E----------EE----------SSEEEE----EE---T-T
T ss_pred EeCCCCCch--------hhhhhhhh--------------c----------hh----------HHHHHH----hc---C-C
Confidence 999999831 01111110 0 00 111221 11 1 2
Q ss_pred eEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCC-ccEEEEECC
Q 013955 281 WLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPC-GAVYITIGD 351 (433)
Q Consensus 281 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~-g~~yi~~G~ 351 (433)
.+|+++|+|++....... ....+.+.+++.+++++++|+||+|...... .++ ..+ |+.|+.+|.
T Consensus 107 ~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~~--~~g--~~~~g~~~~nvg~ 171 (195)
T 1xm7_A 107 KRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNREGI--KCA--CKDYRIECINANV 171 (195)
T ss_dssp EEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSCC----CC--TTSSSCCEEECBG
T ss_pred cEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCccc--ccc--cccCCcceEEEeE
Confidence 489999999876543221 1345788899999999999999999865432 111 112 555676654
No 23
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.18 E-value=4.4e-11 Score=110.73 Aligned_cols=179 Identities=16% Similarity=0.086 Sum_probs=98.2
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
..+|++++||+|.... ..++++.+. ++|.++++||+++.+.... ...+.+..+ .+++.++||||......
T Consensus 2 ~~mri~~isDiHg~~~~l~~~l~~~~--~~d~ii~~GDl~~~g~~~~---~~~~~l~~~---~~~~~v~GNhD~~~~~~- 72 (246)
T 3rqz_A 2 NAMRILIISDVHANLVALEAVLSDAG--RVDDIWSLGDIVGYGPRPR---ECVELVRVL---APNISVIGNHDWACIGR- 72 (246)
T ss_dssp CCCCEEEECCCTTCHHHHHHHHHHHC--SCSEEEECSCCSSSSSCHH---HHHHHHHHH---CSSEECCCHHHHHHTCC-
T ss_pred CCcEEEEEeecCCCHHHHHHHHHhcc--CCCEEEECCCcCCCCCCHH---HHHHHHHhc---CCCEEEeCchHHHHhcc-
Confidence 4689999999984421 123444444 9999999999997554221 222233332 23688999999842110
Q ss_pred cccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCC
Q 013955 214 MDAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNS 293 (433)
Q Consensus 214 ~~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~ 293 (433)
... ..+.... .....| .......++++||++....... . .+++.|.++...
T Consensus 73 ----~~~-~~~~~~~----~~~~~~----------------~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~Hg~p~~~ 123 (246)
T 3rqz_A 73 ----LSL-DEFNPVA----RFASYW----------------TTMQLQAEHLQYLESLPNRMID-G---DWTVVHGSPRHP 123 (246)
T ss_dssp ----CCC-C--CGGG----GCHHHH----------------HHHHCCHHHHHHHHHCCSEEEE-T---TEEEESSCSSST
T ss_pred ----CCc-cccCHHH----HHHHHH----------------HHHHcCHHHHHHHHhCCcEEEE-C---CEEEEECCcCCc
Confidence 000 0000000 000000 0011347889999875443322 1 477888876553
Q ss_pred CCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeee----------cc--CCcc-CCCccEEEEECCCCCC
Q 013955 294 NEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIR----------VN--NGKP-DPCGAVYITIGDGGNK 355 (433)
Q Consensus 294 ~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~----------~~--~~~~-~~~g~~yi~~G~gG~~ 355 (433)
.. ..... ...+.++|++++++++|+||+|....... .. .... -+.|..+++.|+-|.+
T Consensus 124 ~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ivNpGSVG~P 194 (246)
T 3rqz_A 124 IW-EYIYN---ARIAALNFPAFDTPLCFVGHTHVPLYIREDEALSNVAPHHPNDGEVLDVSSGRYIINPGAVGQP 194 (246)
T ss_dssp TT-CCCCS---HHHHHHHGGGCCSSEEECCSSSSEEEEEHHHHHTTCCCBCCCTTCEEECSSSCEEEEECCSSCC
T ss_pred cc-cccCC---hHHHHHHHhccCCCEEEECCcCcccEEEecccccccccccccccceeecCCCeEEEECCccCCC
Confidence 21 11111 25677888999999999999997432210 00 0000 0235778889998875
No 24
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.17 E-value=1.5e-09 Score=107.07 Aligned_cols=246 Identities=15% Similarity=0.045 Sum_probs=125.6
Q ss_pred CCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccchh-hHHHhhhhhhh-------
Q 013955 133 AQFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQP------- 191 (433)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~~~-~w~~~~~~~~~------- 191 (433)
....+||++++|+|.+... +++++.+.+.+||+||++||+++...... ....+.+.++.
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~~~ 89 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKP 89 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSSCC
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCc
Confidence 3678999999999986421 23455566889999999999998665421 12222222221
Q ss_pred -----h----------------------hhCCCceeccCCCcCCCCCcccccccccccccccCCC----CCCC-CCC---
Q 013955 192 -----L----------------------ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE----ESGS-NSN--- 236 (433)
Q Consensus 192 -----l----------------------~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~----~~~~-~~~--- 236 (433)
| ...+|++++.||||...... +......+..|.. +... .++
T Consensus 90 ~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~----~~s~~~lL~~~g~v~l~g~~~~~~~i~~ 165 (417)
T 4fbw_A 90 CELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDG----RYSALDILQVTGLVNYFGRVPENDNIVV 165 (417)
T ss_dssp CCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC---------CCCHHHHHHHTTSCEECCCCC---CEEE
T ss_pred ccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCccccc----cccHHHHhccCCeEEEeCCcccCCceeE
Confidence 1 12699999999999853211 1000010100100 0000 000
Q ss_pred ceEEEEeCe--EEEEEEcccCCCCCChHHH-HHHHHHhhc-ccc---CCCCeEEEEecccccCCCCCCCCCChhHHHHHH
Q 013955 237 LYYSFDVAG--AHLIMLGSYADYDEYSDQY-RWLKDDLSK-VDR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIME 309 (433)
Q Consensus 237 ~~ys~~~g~--v~fi~lds~~~~~~~~~Q~-~WL~~~L~~-~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~ 309 (433)
....+..|+ +.+.++.-. . .+.+ .++.+.... ... ....+.|++.|..........+. .
T Consensus 166 ~pv~l~~g~~~valyG~~~~----~-d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi--p------- 231 (417)
T 4fbw_A 166 SPILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL--P------- 231 (417)
T ss_dssp CCEEEEETTEEEEEEEECCC----C-HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSC--C-------
T ss_pred EeEEEEecCceEEEEeccCC----c-hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccC--c-------
Confidence 012234443 555555321 1 2111 233322211 111 23457899999876543211110 0
Q ss_pred HHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCce
Q 013955 310 PLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTH 389 (433)
Q Consensus 310 ~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~ 389 (433)
.-+...++|+|+.||+|..+...... ..+|+..+..|+.... .+.. -.....||..+++.+ ..
T Consensus 232 ~~l~~~~~DyvalGH~H~~~~~~~~~----~~~g~~i~~PGS~~~~-----s~~e-------~E~~~kg~~lvei~~-~~ 294 (417)
T 4fbw_A 232 ESFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIAT-----SLSP-------GETAPKHCGILNITG-KD 294 (417)
T ss_dssp GGGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSCS-----SCCH-------HHHSCCEEEEEEEET-TE
T ss_pred hhHhhcCCCEEEecCccccceecccc----CCCCEEEEECCCCCcC-----CCcc-------ccCCCCEEEEEEEEC-CE
Confidence 11445689999999999876542100 1235555555553221 1110 001246899999865 45
Q ss_pred EEEEEEEeCCCCCeeeeEEEEEeC
Q 013955 390 AFWSWHRNDDDEPVRSDQLWITSL 413 (433)
Q Consensus 390 l~~~~~~~~~g~~~v~d~f~i~~~ 413 (433)
+.++++....-..-+..+..+...
T Consensus 295 ~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 295 FHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp EEEEEEECSSSCCEEEEEEEGGGC
T ss_pred EEEEEEECCCcccEEEEEEEeecc
Confidence 889999865434345565555444
No 25
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.15 E-value=1.5e-10 Score=102.69 Aligned_cols=141 Identities=12% Similarity=0.110 Sum_probs=83.8
Q ss_pred CeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCccc
Q 013955 136 PITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIM 214 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~ 214 (433)
.+|++++||+|.... .+++++.+...++|+|+++||+++. . ..+.++.+ ..|++.++||||....
T Consensus 25 ~m~i~~iSD~Hg~~~~l~~~l~~~~~~~~D~ii~~GDl~~~----~----~~~~l~~l--~~~~~~V~GNhD~~~~---- 90 (190)
T 1s3l_A 25 HMKIGIMSDTHDHLPNIRKAIEIFNDENVETVIHCGDFVSL----F----VIKEFENL--NANIIATYGNNDGERC---- 90 (190)
T ss_dssp -CEEEEECCCTTCHHHHHHHHHHHHHSCCSEEEECSCCCST----H----HHHHGGGC--SSEEEEECCTTCCCHH----
T ss_pred CeEEEEEeeCCCCHHHHHHHHHHHhhcCCCEEEECCCCCCH----H----HHHHHHhc--CCCEEEEeCCCcchHH----
Confidence 489999999984321 2345556666899999999999852 1 12223322 4799999999998421
Q ss_pred ccccccccccccCCCCCCCCCCceEEEEeCeEEEEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecccccCCC
Q 013955 215 DAFQSYNARWKMPFEESGSNSNLYYSFDVAGAHLIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSN 294 (433)
Q Consensus 215 ~~~~~y~~~~~~p~~~~~~~~~~~ys~~~g~v~fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~ 294 (433)
. +...+ .|. + ..+ + +.. . ...+. ..++|++.|.|++.
T Consensus 91 -~---~~~~~-~~~---~---~~~---------l--~~~-------~----------~~~~~--~~~~ill~Hg~~~~-- 127 (190)
T 1s3l_A 91 -K---LKEWL-KDI---N---EEN---------I--IDD-------F----------ISVEI--DDLKFFITHGHHQS-- 127 (190)
T ss_dssp -H---HHHHH-HHH---C---TTC---------E--EES-------E----------EEEEE--TTEEEEEEESCCHH--
T ss_pred -H---HHHHh-ccc---C---hhh---------h--ccc-------c----------eEEee--CCcEEEEECCChHH--
Confidence 1 11111 111 0 000 0 000 0 00111 12589999988643
Q ss_pred CCCCCCChhHHHHHHHHHHHc-CCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCC
Q 013955 295 EAHQGEGDGMMAIMEPLLYAA-SVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGN 354 (433)
Q Consensus 295 ~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~ 354 (433)
+.+.+.+. +++++++||+|..+... .+++.++..|+.|.
T Consensus 128 -------------l~~~~~~~~~~d~vl~GHtH~~~~~~--------~~~~~~iNpGs~~~ 167 (190)
T 1s3l_A 128 -------------VLEMAIKSGLYDVVIYGHTHERVFEE--------VDDVLVINPGECCG 167 (190)
T ss_dssp -------------HHHHHHHHSCCSEEEEECSSCCEEEE--------ETTEEEEECCCSSC
T ss_pred -------------HHHHHHhcCCCCEEEECCCCCcceEE--------ECCEEEEECCcccc
Confidence 33445555 99999999999876443 24788888888653
No 26
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.15 E-value=2.8e-09 Score=106.06 Aligned_cols=244 Identities=15% Similarity=0.063 Sum_probs=123.9
Q ss_pred CCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccchh-hHHHhhhhhhh--------
Q 013955 134 QFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYMQH-RWDTFGELVQP-------- 191 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~~~-~w~~~~~~~~~-------- 191 (433)
...+||++++|+|.+... ..+++.+.+.+||+||++||+++...... ....+.+.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~~~~ 153 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPC 153 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSSCCC
T ss_pred CCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccCCcc
Confidence 678999999999986431 34555666899999999999998765421 12222222221
Q ss_pred ----h----------------------hhCCCceeccCCCcCCCCCcccccccccccccccCCC----CCCC-CCC---c
Q 013955 192 ----L----------------------ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE----ESGS-NSN---L 237 (433)
Q Consensus 192 ----l----------------------~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~----~~~~-~~~---~ 237 (433)
| ...+|++++.||||...... +......+..|.. +... .++ .
T Consensus 154 ~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~~~~----~~s~~~LL~~~g~v~l~g~~~~~d~i~~~ 229 (472)
T 4fbk_A 154 ELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDG----RYSALDILQVTGLVNYFGRVPENDNIVVS 229 (472)
T ss_dssp CCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCCC------CCCHHHHHHHTTSCEECCCCSCSSSEEEC
T ss_pred hheecchhhhhcccccccccccccccccCCCcEEEEecCCCCccccc----cccHHHHhccCCcEEEeCCcccCCceeEE
Confidence 1 12699999999999853211 1000010000100 0000 000 0
Q ss_pred eEEEEeCe--EEEEEEcccCCCCCChHH-HHHHHHHhhc-ccc---CCCCeEEEEecccccCCCCCCCCCChhHHHHHHH
Q 013955 238 YYSFDVAG--AHLIMLGSYADYDEYSDQ-YRWLKDDLSK-VDR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEP 310 (433)
Q Consensus 238 ~ys~~~g~--v~fi~lds~~~~~~~~~Q-~~WL~~~L~~-~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~ 310 (433)
...+..|+ +.+.++.-. . .+. ..++.+.... ... ....+.|++.|..........+.. +
T Consensus 230 pv~l~kg~~~valyGl~y~----~-d~rl~r~~~e~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yip-----e---- 295 (472)
T 4fbk_A 230 PILLQKGFTKLALYGISNV----R-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLP-----E---- 295 (472)
T ss_dssp CEEEEETTEEEEEEECCCC----C-HHHHHHHHHTTCEEEEEESTTGGGEEEEEEEESCSCCSSTTSSCC-----G----
T ss_pred EEEEEeCCceEEEEecCCC----c-hhhhhhhhhhhhhhhhCcccccCCceEEEEecCCccCCCccccCC-----h----
Confidence 12234443 444444321 1 111 1233222211 111 123468999998765432111100 1
Q ss_pred HHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEEcCceE
Q 013955 311 LLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIVNSTHA 390 (433)
Q Consensus 311 l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~~~~~l 390 (433)
-+...++|+|+.||+|..+...... ..+++..+..|+.... .+... + ....||..+++.+ ..+
T Consensus 296 ~ll~~g~DyValGH~H~~~~~~~~~----~~~g~~ivyPGS~~~~-----s~~e~--E-----~~~kg~~lveI~~-~~v 358 (472)
T 4fbk_A 296 SFIQDFYDFVLWGHEHECLIDGSYN----PTQKFTVVQPGSTIAT-----SLSPG--E-----TAPKHCGILNITG-KDF 358 (472)
T ss_dssp GGSCTTCSEEEEESCCSCEEEEEEE----TTTTEEEEECCCSSCS-----SCCGG--G-----CSCCEEEEEEEET-TEE
T ss_pred hhhhcCCCEEEecCcccceeeeccc----CCCCeEEEECCCcccc-----ccCcc--C-----CCCCEEEEEEEEC-CEE
Confidence 1334589999999999876542100 0134444545543211 11100 0 1246899999865 458
Q ss_pred EEEEEEeCCCCCeeeeEEEEEe
Q 013955 391 FWSWHRNDDDEPVRSDQLWITS 412 (433)
Q Consensus 391 ~~~~~~~~~g~~~v~d~f~i~~ 412 (433)
.++++....-..-+..+..+..
T Consensus 359 ~ve~I~L~t~Rpf~~~~i~L~~ 380 (472)
T 4fbk_A 359 HLEKIRLRTVRPFIMKDIILSE 380 (472)
T ss_dssp EEEEEECSSSCCEEEEEEEGGG
T ss_pred EEEEEECCCcccEEEEEEEEec
Confidence 9999987543434455544433
No 27
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.12 E-value=8.8e-09 Score=102.05 Aligned_cols=240 Identities=15% Similarity=0.073 Sum_probs=124.5
Q ss_pred CCCCeEEEEEecCCCCCCh-------------HHHHHHhhcCCCceEEccccccccccc-hhhHHHhhhhhhhh------
Q 013955 133 AQFPITFAVAGDLGQTGWT-------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPL------ 192 (433)
Q Consensus 133 ~~~~~~f~~~gD~~~~~~~-------------~~~l~~i~~~~pd~vl~~GD~~~~~~~-~~~w~~~~~~~~~l------ 192 (433)
....+||++++|+|.+... +.+++.+.+.+||+||++||+++.... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~~~~ 108 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMGDRP 108 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBCSSC
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhccCCc
Confidence 3678999999999876421 234555668899999999999976554 22333344444432
Q ss_pred ----------------------------hhCCCceeccCCCcCCCCCccccccccc------ccccccCCCCCCCCCC--
Q 013955 193 ----------------------------ASARPWMVTQGNHEKESIPLIMDAFQSY------NARWKMPFEESGSNSN-- 236 (433)
Q Consensus 193 ----------------------------~~~iP~~~v~GNHD~~~~~~~~~~~~~y------~~~~~~p~~~~~~~~~-- 236 (433)
...+|++.+.||||....... .....+ ...|.... ..+.
T Consensus 109 ~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~g~~~-l~~~~lL~~~glv~~fg~~~----~~e~i~ 183 (431)
T 3t1i_A 109 VQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPTGADA-LCALDILSCAGFVNHFGRSM----SVEKID 183 (431)
T ss_dssp CCCEECSCC------------------CCBCSCEEECCCSSSCCBTTTT-BCHHHHHHHHTSEEECCCCC----CSSCEE
T ss_pred ccceeccchhhccccccccccccccccccCCCcEEEEccCCCCcccccc-cCHHHHhccCCcEEEECCcC----ccccee
Confidence 125999999999998532110 000011 11111000 0001
Q ss_pred -ceEEEEeCe--EEEEEEcccCCCCCChHHHHHHHHHhhc-----ccc---CCCCeEEEEecccccCCCCCCCCCChhHH
Q 013955 237 -LYYSFDVAG--AHLIMLGSYADYDEYSDQYRWLKDDLSK-----VDR---KKTPWLLVLLHVPWYNSNEAHQGEGDGMM 305 (433)
Q Consensus 237 -~~ys~~~g~--v~fi~lds~~~~~~~~~Q~~WL~~~L~~-----~~~---~~~~~~iv~~H~P~~~~~~~~~~~~~~~~ 305 (433)
....+..|+ +.+.++.- .. .+ .+.+.+.. ... ....+.|++.|......+......
T Consensus 184 ~~Pv~l~~g~~~valyGl~~----~~-~~---~l~~~~~~~~v~~~~p~~~~~~~~~Ilv~H~~~~~~g~~~~ip----- 250 (431)
T 3t1i_A 184 ISPVLLQKGSTKIALYGLGS----IP-DE---RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIP----- 250 (431)
T ss_dssp ECCEEEEETTEEEEEEEECC----CC-HH---HHHHHHHTTCEEECCCSSCGGGEEEEEEECSCCSCSSSSSSCC-----
T ss_pred eEEEEEecCCEeEEEEeCCC----CC-HH---HHhhhhccccceeecccccCCCceEEEEECCCccCCCccccCC-----
Confidence 012233353 55666632 11 22 22222221 111 123368999999763221111110
Q ss_pred HHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEEECCCCCCCcccccCCCCCCCcceeEeccccEEEEEEE
Q 013955 306 AIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYITIGDGGNKEGLARKYKNPQPDWSVFREASFGHGELKIV 385 (433)
Q Consensus 306 ~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~~~~~~~~~G~~~l~v~ 385 (433)
.. +...++|+|+.||+|..+...... ..+++..+..|+-... .+.. .....-||..+++.
T Consensus 251 ---~~-l~~~~~Dyv~lGH~H~~~~~~~~~----~~~~~~i~yPGS~~~~-----s~~e-------~E~~~k~~~lvei~ 310 (431)
T 3t1i_A 251 ---EQ-FLDDFIDLVIWGHEHECKIAPTKN----EQQLFYISQPGSSVVT-----SLSP-------GEAVKKHVGLLRIK 310 (431)
T ss_dssp ---GG-GSCTTCCEEEECSCCSCEEEEEEC----TTTCCEEEECCCSSCC-----SCCH-------HHHSCCEEEEEEEE
T ss_pred ---Hh-HhhCCCCEEEeccccccccccccc----CCCCEEEEeCCCCccc-----CcCc-------ccCCCCEEEEEEEE
Confidence 11 334579999999999976543111 0135544545543211 1110 00124589999986
Q ss_pred cCceEEEEEEEeCCCCCeeeeEEEEE
Q 013955 386 NSTHAFWSWHRNDDDEPVRSDQLWIT 411 (433)
Q Consensus 386 ~~~~l~~~~~~~~~g~~~v~d~f~i~ 411 (433)
+ ..+.++++....-..-+..+..+.
T Consensus 311 ~-~~~~ve~i~l~~~R~f~~~~v~l~ 335 (431)
T 3t1i_A 311 G-RKMNMHKIPLHTVRQFFMEDIVLA 335 (431)
T ss_dssp T-TEEEEEEEECSSSCCEEEEEEEGG
T ss_pred C-CEEEEEEEECCCcceEEEEEEEEe
Confidence 5 468999998753333344444443
No 28
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=99.11 E-value=2.9e-10 Score=110.08 Aligned_cols=72 Identities=24% Similarity=0.230 Sum_probs=52.5
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHhhcCCCceEEccccccccccc-hhhHHHhhhhhhhhhh-CCCcee
Q 013955 137 ITFAVAGDLGQTGWT--------------KSTLDHIGQCKYDVHLLPGDLSYADYM-QHRWDTFGELVQPLAS-ARPWMV 200 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~--------------~~~l~~i~~~~pd~vl~~GD~~~~~~~-~~~w~~~~~~~~~l~~-~iP~~~ 200 (433)
+||++++|+|.+... .++++.+.+.+||+||++||+++.... ...+..+.+.++.+.. .+|++.
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~~v~~ 80 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFA 80 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCCcEEE
Confidence 589999999987531 233444557899999999999976433 2344555566666654 589999
Q ss_pred ccCCCcCC
Q 013955 201 TQGNHEKE 208 (433)
Q Consensus 201 v~GNHD~~ 208 (433)
++||||..
T Consensus 81 v~GNHD~~ 88 (333)
T 1ii7_A 81 IEGNHDRT 88 (333)
T ss_dssp ECCTTTCC
T ss_pred eCCcCCCc
Confidence 99999985
No 29
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.87 E-value=1.5e-08 Score=91.18 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=47.2
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccc---hhhH--HHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYM---QHRW--DTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~---~~~w--~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
..++++++||+|.... .+++++.+...++|+++++||+++.+.. ...| ....+.++.+. .|++.++||||..
T Consensus 24 ~mmki~~iSD~H~~~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~~ 101 (208)
T 1su1_A 24 AMMKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEVA--HKVIAVRGNCDSE 101 (208)
T ss_dssp -CCEEEEECCCTTBHHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTTG--GGEEECCCTTCCH
T ss_pred ccEEEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEECCCccccCcccccccccCHHHHHHHHHhcC--CceEEEECCCchH
Confidence 3489999999986421 2345555656789999999999975431 1111 22333333332 5899999999973
No 30
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.76 E-value=1.5e-08 Score=104.71 Aligned_cols=173 Identities=17% Similarity=0.137 Sum_probs=92.2
Q ss_pred CCCeEEEEEecCCCCC--C----------------hHHHHHHhhcCCCc-eEEccccccccccchh--hHHHhhhhhhhh
Q 013955 134 QFPITFAVAGDLGQTG--W----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELVQPL 192 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~--~----------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~--~w~~~~~~~~~l 192 (433)
...++|+.++|+|..- . ....++++++.+|| ++|.+||++....... ......+.+..+
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~l 106 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRL 106 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHHT
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHhc
Confidence 4679999999998531 1 13455666677788 8899999987543211 111222223222
Q ss_pred hhCCCceeccCCCcCCCCCcccccccccccccccCC---CC--CCC-----CCCceEEEEeCe--EEEEEEcccC-----
Q 013955 193 ASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---EE--SGS-----NSNLYYSFDVAG--AHLIMLGSYA----- 255 (433)
Q Consensus 193 ~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~~--~~~-----~~~~~ys~~~g~--v~fi~lds~~----- 255 (433)
-+-+.++||||+.... +.+..+.+....|. |- ... ....|..++.++ +.|+.+.+..
T Consensus 107 ---g~d~~~lGNHEfd~g~---~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~ 180 (552)
T 2z1a_A 107 ---RYRAMALGNHEFDLGP---GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREIS 180 (552)
T ss_dssp ---TCCEEECCGGGGTTCH---HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHHHS
T ss_pred ---CCCccccccccccCCH---HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhhcc
Confidence 3447789999996421 11111111111111 10 000 123455677776 5566665431
Q ss_pred CC------CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCcccc
Q 013955 256 DY------DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAY 328 (433)
Q Consensus 256 ~~------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y 328 (433)
.. ....++.+...+.|++. +.+.+|+++|.|.... ..+.++ .+||++|+||+|..
T Consensus 181 ~~~~~~~~~d~~~~~~~~v~~l~~~---~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlgGHtH~~ 242 (552)
T 2z1a_A 181 NPGPTVAFLDPYESAQKAVYELLAK---GVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVGGHSHTL 242 (552)
T ss_dssp CCCTTCEECCHHHHHHHHHHHHHHT---TCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEECSSCCC
T ss_pred CCCCCcEECCHHHHHHHHHHHHHhc---CCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEeCCcCcc
Confidence 00 01123333333444432 4557999999984210 122233 58999999999986
Q ss_pred ee
Q 013955 329 ER 330 (433)
Q Consensus 329 ~r 330 (433)
..
T Consensus 243 ~~ 244 (552)
T 2z1a_A 243 LG 244 (552)
T ss_dssp BS
T ss_pred cc
Confidence 53
No 31
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.75 E-value=2.8e-08 Score=101.80 Aligned_cols=185 Identities=18% Similarity=0.170 Sum_probs=92.9
Q ss_pred CCCeEEEEEecCCCCCCh-----------HHHHHHhhcC----CC-ceEEccccccccccchh--hHHHhhhhhhhhhhC
Q 013955 134 QFPITFAVAGDLGQTGWT-----------KSTLDHIGQC----KY-DVHLLPGDLSYADYMQH--RWDTFGELVQPLASA 195 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~-----------~~~l~~i~~~----~p-d~vl~~GD~~~~~~~~~--~w~~~~~~~~~l~~~ 195 (433)
...++|+.++|+|..... ...++++++. +| +++|.+||++....... ..+...+.+..+
T Consensus 6 ~~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--- 82 (516)
T 1hp1_A 6 TYKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--- 82 (516)
T ss_dssp CEEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH---
T ss_pred ceEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc---
Confidence 346899999999865321 2345555432 46 79999999985433211 112223334333
Q ss_pred CCceeccCCCcCCCCCcccccccccccccccCC---C----CCC-CCCCceEEEEeCe--EEEEEEcccCC--CC-C---
Q 013955 196 RPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESG-SNSNLYYSFDVAG--AHLIMLGSYAD--YD-E--- 259 (433)
Q Consensus 196 iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~----~~~-~~~~~~ys~~~g~--v~fi~lds~~~--~~-~--- 259 (433)
-+-+.++||||+..... .+.........|. | ..+ .....|..++.++ +.|+.+.+... +. +
T Consensus 83 g~d~~~~GNHEfd~g~~---~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~~ 159 (516)
T 1hp1_A 83 GYDAMAIGNHEFDNPLT---VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEYF 159 (516)
T ss_dssp TCCEEECCGGGGSSCHH---HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCSC
T ss_pred CCCEEeeccccccCCHH---HHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCcc
Confidence 24467899999953211 1111111111111 1 000 0113455567786 45666654321 10 0
Q ss_pred -------ChHH-HHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 260 -------YSDQ-YRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 260 -------~~~Q-~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
..+. .+|+++ |++. .+.+.+|+++|.|....... +........+...+...+||++|+||.|...
T Consensus 160 ~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~~~ 232 (516)
T 1hp1_A 160 TDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQDPV 232 (516)
T ss_dssp TTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred CCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCccc
Confidence 0122 233332 3321 14567999999997543221 1110111234333444569999999999764
No 32
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.67 E-value=2e-07 Score=95.66 Aligned_cols=204 Identities=17% Similarity=0.170 Sum_probs=102.2
Q ss_pred CCCeEEEEEecCCCCCC-----------------hHHHHHHhhcCCCc-eEEccccccccccchhh-------HHHhhhh
Q 013955 134 QFPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHR-------WDTFGEL 188 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-----------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~-------w~~~~~~ 188 (433)
...++|+.++|+|..-. ....++++++.+++ ++|.+||++........ .....+.
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~~~ 96 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLVDF 96 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcHHHHHHhhcccCcchHHHH
Confidence 46799999999985321 12455666666777 67789999975532110 1222222
Q ss_pred hhhhhhCCCceeccCCCcCCCCCcccccccccccccccCCCCC-----CC--CCCceEEEEeCeEE--EEEEcccC--CC
Q 013955 189 VQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFEES-----GS--NSNLYYSFDVAGAH--LIMLGSYA--DY 257 (433)
Q Consensus 189 ~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~~~-----~~--~~~~~ys~~~g~v~--fi~lds~~--~~ 257 (433)
+..+ -+-+.++||||+..... .+..+.+....|.-.. +. ....|..++.++++ ||.+.+.. .+
T Consensus 97 ln~l---g~D~~t~GNHefd~G~~---~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~~~~~ 170 (527)
T 3qfk_A 97 YNRM---AFDFGTLGNHEFNYGLP---YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQFIPHW 170 (527)
T ss_dssp HHHT---CCCEECCCGGGGTTCHH---HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTTGGGT
T ss_pred HHhc---CCcEEeccccccccCHH---HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCCcccc
Confidence 2222 23356799999854321 1111111111111000 00 01235567788754 55555421 11
Q ss_pred CC--------ChHHHHHHHHHhhccccCCCCeEEEEecccccCCCC-CC-----CCCChhHHHHHHHHHHHcCCcEEEec
Q 013955 258 DE--------YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNE-AH-----QGEGDGMMAIMEPLLYAASVDLVLAG 323 (433)
Q Consensus 258 ~~--------~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~~-----~~~~~~~~~~l~~l~~~~~VdlvlsG 323 (433)
.. .....+.+++.+++.+ .+.+.+|+++|.+...... .. .++. ....+..-+ ..+||++|+|
T Consensus 171 ~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~--~~~~la~~~-~~giDlIlgG 246 (527)
T 3qfk_A 171 EQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGEN--EGYAMLEAF-SKDIDIFITG 246 (527)
T ss_dssp SCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSC--CHHHHHHHH-GGGCSEEECC
T ss_pred cCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccch--HHHHHHHhc-CCCCcEEEEC
Confidence 10 1123344444444443 2466799999987543211 00 1111 111222222 2479999999
Q ss_pred CcccceeeeeccCCccCCCccEEEEECCCCCC
Q 013955 324 HVHAYERSIRVNNGKPDPCGAVYITIGDGGNK 355 (433)
Q Consensus 324 H~H~y~r~~~~~~~~~~~~g~~yi~~G~gG~~ 355 (433)
|+|...... -+++..+.+|.-|..
T Consensus 247 HtH~~~~~~--------v~~~~ivqag~~g~~ 270 (527)
T 3qfk_A 247 HQHRQIAER--------FKQTAVIQPGTRGTT 270 (527)
T ss_dssp SSCCEEEEE--------ETTEEEEEECSTTSE
T ss_pred CCCcccceE--------ECCEEEeccChhhCE
Confidence 999865321 135655666665554
No 33
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.54 E-value=7.6e-07 Score=90.93 Aligned_cols=186 Identities=17% Similarity=0.152 Sum_probs=91.7
Q ss_pred CCeEEEEEecCCCCCC-------------------hHHHHHHhhcCCCceEEc-cccccccccchhhHHHhhhhhhhhhh
Q 013955 135 FPITFAVAGDLGQTGW-------------------TKSTLDHIGQCKYDVHLL-PGDLSYADYMQHRWDTFGELVQPLAS 194 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-------------------~~~~l~~i~~~~pd~vl~-~GD~~~~~~~~~~w~~~~~~~~~l~~ 194 (433)
..++|+.++|+|..-. ....++++++.+++.+++ +||++..... ..+......++.+..
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~-~~~~~g~~~~~~ln~ 83 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYI-SSLTKGKAIIDIMNT 83 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHH-HHTTTTHHHHHHHTT
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchh-hhhcCChHHHHHHHh
Confidence 4589999999984311 123456666778887776 9999874321 111111112222222
Q ss_pred CCCceeccCCCcCCCCCcccccccccccccccCC---C----CCCC-C-CCceEEEEeCeE--EEEEEccc-----CCC-
Q 013955 195 ARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E----ESGS-N-SNLYYSFDVAGA--HLIMLGSY-----ADY- 257 (433)
Q Consensus 195 ~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~----~~~~-~-~~~~ys~~~g~v--~fi~lds~-----~~~- 257 (433)
.-+-+.++||||+..... .+..+......|. | ..+. . ...|.-++.+++ -|+.+-+. ...
T Consensus 84 lg~D~~tlGNHEfd~G~~---~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~~~~~ 160 (509)
T 3ive_A 84 MPFDAVTIGNHEFDHGWD---NTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFNDTVSA 160 (509)
T ss_dssp SCCSEECCCGGGGTTCHH---HHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHHHSCG
T ss_pred cCCcEEeecccccccCHH---HHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCccccccccc
Confidence 234567899999854321 1111111111111 1 0111 1 234556678874 45566321 000
Q ss_pred ---C--CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCC----CChhHHHHHHHHHHH-cCCcEEEecCccc
Q 013955 258 ---D--EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQG----EGDGMMAIMEPLLYA-ASVDLVLAGHVHA 327 (433)
Q Consensus 258 ---~--~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~----~~~~~~~~l~~l~~~-~~VdlvlsGH~H~ 327 (433)
. ......+.+++.+++.+. +.+.+|+++|.+.-........ ...... ..+.++ .++|++|+||.|.
T Consensus 161 ~~~~g~~~~d~~~~~~~~v~~Lk~-~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDlIlgGHtH~ 236 (509)
T 3ive_A 161 ATRVGIEARDEIKWLQRYIDELKG-KVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDILITGHAHV 236 (509)
T ss_dssp GGCTTEEECCHHHHHHHHHHHHTT-TCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCEEEEESSCC
T ss_pred ccCCCCEEcCHHHHHHHHHHHHHh-cCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcEEEeCCcCc
Confidence 0 012334455555555444 3667999999875322111000 001111 223333 3799999999996
Q ss_pred c
Q 013955 328 Y 328 (433)
Q Consensus 328 y 328 (433)
.
T Consensus 237 ~ 237 (509)
T 3ive_A 237 G 237 (509)
T ss_dssp C
T ss_pred c
Confidence 4
No 34
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.51 E-value=2.3e-07 Score=95.55 Aligned_cols=176 Identities=15% Similarity=0.157 Sum_probs=92.0
Q ss_pred CCCeEEEEEecCCCCCC---------------------hHHHHHHhhcCCC-ceEEccccccccccchh--hHHHhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW---------------------TKSTLDHIGQCKY-DVHLLPGDLSYADYMQH--RWDTFGELV 189 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~---------------------~~~~l~~i~~~~p-d~vl~~GD~~~~~~~~~--~w~~~~~~~ 189 (433)
...++|+.++|+|..-. ....++++++.+| +++|.+||++....... ......+.+
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 45699999999985311 1234556666666 59999999997654311 112223333
Q ss_pred hhhhhCCCceeccCCCcCCCCCccccccc-ccccccccCCCCCC---C---------CCCceEEEEeCeEE--EEEEccc
Q 013955 190 QPLASARPWMVTQGNHEKESIPLIMDAFQ-SYNARWKMPFEESG---S---------NSNLYYSFDVAGAH--LIMLGSY 254 (433)
Q Consensus 190 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~-~y~~~~~~p~~~~~---~---------~~~~~ys~~~g~v~--fi~lds~ 254 (433)
..+ -+-+.++||||+..... .+. .+......|.-... . ....|.-++.++++ |+.+.+.
T Consensus 103 n~l---g~d~~~~GNHEfd~g~~---~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~~~~ 176 (546)
T 4h2g_A 103 NAL---RYDAMALGNHEFDNGVE---GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSK 176 (546)
T ss_dssp HHH---TCSEEECCGGGGTTHHH---HHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEEECT
T ss_pred Hhc---CCcEEeccCcccccCHH---HHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEeccc
Confidence 333 23367899999853211 111 22222111110000 0 11345567788755 5555442
Q ss_pred C-----CCC---CChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcc
Q 013955 255 A-----DYD---EYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVH 326 (433)
Q Consensus 255 ~-----~~~---~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H 326 (433)
. ... ......+.+++.+++.+..+.+.+|+++|.+... ...+...+ .+||++|+||+|
T Consensus 177 ~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~------------d~~la~~~--~giDlIlgGHtH 242 (546)
T 4h2g_A 177 ETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEM------------DKLIAQKV--RGVDVVVGGHSN 242 (546)
T ss_dssp THHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHH------------HHHHHHHS--TTCCEEECCSSC
T ss_pred ccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccc------------hHHHHHhC--CCCcEEEeCCcC
Confidence 1 000 0012334455554444333466799999987421 11222211 379999999999
Q ss_pred cce
Q 013955 327 AYE 329 (433)
Q Consensus 327 ~y~ 329 (433)
...
T Consensus 243 ~~~ 245 (546)
T 4h2g_A 243 TFL 245 (546)
T ss_dssp CCC
T ss_pred ccc
Confidence 853
No 35
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.50 E-value=1e-06 Score=90.89 Aligned_cols=149 Identities=13% Similarity=0.051 Sum_probs=75.3
Q ss_pred HHHhhcC--C--Cc-eEEccccccccccchhhH---HHhhhhhhhhhhCCCceeccCCCcCCCCCccccccccccccccc
Q 013955 155 LDHIGQC--K--YD-VHLLPGDLSYADYMQHRW---DTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKM 226 (433)
Q Consensus 155 l~~i~~~--~--pd-~vl~~GD~~~~~~~~~~w---~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~ 226 (433)
++++++. + || ++|.+||++..... ..+ ....+.+..+. .+++ + ||||+.... +.+..+.+....
T Consensus 111 v~~~r~~~~~~gpd~Lll~~GD~~~gs~~-~~~~~g~~~~~~ln~lg--~d~~-~-GNHEfd~G~---~~l~~~l~~~~~ 182 (562)
T 2wdc_A 111 IRDQKARVEAEGGKALVLDGGDTWTNSGL-SLLTRGEAVVRWQNLVG--VDHM-V-SHWEWTLGR---ERVEELLGLFRG 182 (562)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCSSSSHH-HHHHTTHHHHHHHHHHT--CCEE-C-CSGGGGGCH---HHHHHHHHHCCS
T ss_pred HHHHHhhhhcCCCCEEEEeCCCCCCcchh-hhhhCCHHHHHHHHhhC--CcEE-e-cchhcccCH---HHHHHHHHhCCC
Confidence 4444443 3 88 89999999975442 112 22333444442 6665 6 999985321 112222221221
Q ss_pred CCCC-------CC-CCCCceEEEEeCe--EEEEEEcccC-------------CCCCChHHHHHHHHHhhccccCCCCeEE
Q 013955 227 PFEE-------SG-SNSNLYYSFDVAG--AHLIMLGSYA-------------DYDEYSDQYRWLKDDLSKVDRKKTPWLL 283 (433)
Q Consensus 227 p~~~-------~~-~~~~~~ys~~~g~--v~fi~lds~~-------------~~~~~~~Q~~WL~~~L~~~~~~~~~~~i 283 (433)
|.-. .+ .....|-.++.++ +.|+.+.+.. .+....+..+-..+.|++ .+.+.+|
T Consensus 183 p~L~aNv~~~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iI 259 (562)
T 2wdc_A 183 EFLSYNIVDDLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVV 259 (562)
T ss_dssp EECCSSCEETTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEE
T ss_pred CEEEEEEEecCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEE
Confidence 2100 01 0112445567777 5566665421 011112333222233433 2456799
Q ss_pred EEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCcccce
Q 013955 284 VLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHAYE 329 (433)
Q Consensus 284 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~y~ 329 (433)
+++|.|... .. .+.++ .+||++|+||.|...
T Consensus 260 vLsH~g~~~------------d~---~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 260 LLSHNGMQL------------DA---ALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp EEECSCHHH------------HH---HHHTTSSSCCEEEECSSCCCC
T ss_pred EEeCCCCcc------------hH---HHHhcCCCCcEEEeCCCCCCC
Confidence 999998421 01 22333 489999999999864
No 36
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.47 E-value=8.9e-07 Score=91.79 Aligned_cols=174 Identities=14% Similarity=0.138 Sum_probs=90.3
Q ss_pred CCeEEEEEecCCCCCCh----------------------HHHHHHhhcCCCc-eEEccccccccccchh--hHHHhhhhh
Q 013955 135 FPITFAVAGDLGQTGWT----------------------KSTLDHIGQCKYD-VHLLPGDLSYADYMQH--RWDTFGELV 189 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~----------------------~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~--~w~~~~~~~ 189 (433)
-.++|+.++|+|..-.. ...++++++.+++ ++|.+||++....... ......+.+
T Consensus 11 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l 90 (579)
T 3ztv_A 11 VELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAVM 90 (579)
T ss_dssp EEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHHH
T ss_pred eEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHHH
Confidence 35899999999843211 2345555555666 8999999997653211 112222333
Q ss_pred hhhhhCCCceeccCCCcCCCCCcccccccccccccccCC---C---CCCC----CCCceEEEEeCe--EEEEEEcc-c--
Q 013955 190 QPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E---ESGS----NSNLYYSFDVAG--AHLIMLGS-Y-- 254 (433)
Q Consensus 190 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~---~~~~----~~~~~ys~~~g~--v~fi~lds-~-- 254 (433)
..+ -+-+.++||||+.... +.+..+.+....|. | ..+. .-..|--++.++ +-||.+.+ .
T Consensus 91 n~l---g~D~~tlGNHEfd~G~---~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~~~~~ 164 (579)
T 3ztv_A 91 NAG---NFHYFTLGNHEFDAGN---EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDTVNKT 164 (579)
T ss_dssp HHH---TCSEEECCSGGGTTHH---HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEECSHHH
T ss_pred Hhc---CcCeeeccccccccCH---HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEcCCcc
Confidence 332 2345689999985321 11222222111121 0 0011 012455567887 45666633 1
Q ss_pred ---CCCCC---ChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH-cCCcEEEecCccc
Q 013955 255 ---ADYDE---YSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA-ASVDLVLAGHVHA 327 (433)
Q Consensus 255 ---~~~~~---~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~VdlvlsGH~H~ 327 (433)
..... .....+-+++.+++.+..+.+.+|+++|.+... ...+ .++ -+||++|+||+|.
T Consensus 165 ~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~l---a~~~~giDlIlgGHtH~ 229 (579)
T 3ztv_A 165 VNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIEI---AQKVNDIDVIVTGDSHY 229 (579)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHHH---HHHCSSCCEEEECSSCC
T ss_pred ccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHHH---HHhCCCCCEEEeCCCCc
Confidence 11001 122334455555444433466799999987421 1122 222 3799999999998
Q ss_pred ce
Q 013955 328 YE 329 (433)
Q Consensus 328 y~ 329 (433)
..
T Consensus 230 ~~ 231 (579)
T 3ztv_A 230 LY 231 (579)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 37
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=98.43 E-value=1.2e-07 Score=86.05 Aligned_cols=68 Identities=28% Similarity=0.204 Sum_probs=44.5
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhc-CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~l~~i~~-~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
....+++++||+|.... ..++++.+.. .++|.++++||+++.+.... ...+. +. ..+++.+.||||..
T Consensus 10 ~~~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~~i~~GD~~~~g~~~~---~~~~~---l~-~~~~~~v~GNhd~~ 79 (221)
T 1g5b_A 10 SKYRNIWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENV---ECLEL---IT-FPWFRAVRGNHEQM 79 (221)
T ss_dssp GGCSCEEEECCCTTCHHHHHHHHHHHTCCTTTCEEEECSCCSSSSSCHH---HHHGG---GG-STTEEECCCHHHHH
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHccCCCCCCEEEEeCCccCCCCChH---HHHHH---Hh-cCCEEEEccCcHHH
Confidence 34578999999985421 2244455543 47999999999997654321 11222 22 25899999999973
No 38
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=98.36 E-value=1e-05 Score=83.10 Aligned_cols=181 Identities=14% Similarity=0.122 Sum_probs=88.9
Q ss_pred CCCeEEEEEecCCCCCC--------------hHHHHHHhh----cCCCc-eEEccccccccccchh----hHHHhhhhhh
Q 013955 134 QFPITFAVAGDLGQTGW--------------TKSTLDHIG----QCKYD-VHLLPGDLSYADYMQH----RWDTFGELVQ 190 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~--------------~~~~l~~i~----~~~pd-~vl~~GD~~~~~~~~~----~w~~~~~~~~ 190 (433)
...++|+.++|+|..-. ..++...++ +.+++ ++|.+||++....... ......+.+.
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 56899999999986421 112222332 36788 5799999996543211 1111122222
Q ss_pred hhhhCCCceeccCCCcCCCCCcccccccccccccccCC---C-----CCCC---CCCceEEEEe--CeEE--EEEEcccC
Q 013955 191 PLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPF---E-----ESGS---NSNLYYSFDV--AGAH--LIMLGSYA 255 (433)
Q Consensus 191 ~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~---~-----~~~~---~~~~~ys~~~--g~v~--fi~lds~~ 255 (433)
.+ -.=+.++||||+.........+....+....|. | ..+. ....|.-++. ++++ ||.+.+..
T Consensus 93 ~l---g~Da~tlGNHEfD~G~~~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt~~~ 169 (557)
T 3c9f_A 93 KQ---DYDLLTIGNHELYLWENSKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFLFDF 169 (557)
T ss_dssp TS---CCSEECCCGGGSSSHHHHHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECCCCC
T ss_pred hc---CCCEEeecchhcccchHHHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEeecCC
Confidence 22 233568999999642110001111111111121 1 0010 1123556777 7654 55554321
Q ss_pred CCC------CChHH--H-HHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHH--cCCcE-EEec
Q 013955 256 DYD------EYSDQ--Y-RWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYA--ASVDL-VLAG 323 (433)
Q Consensus 256 ~~~------~~~~Q--~-~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~Vdl-vlsG 323 (433)
... ....+ . +|+++.+++ +.+.+|+++|.+..... .. . ......+.+ .++|+ +|.|
T Consensus 170 ~~~~~~~~~~d~~e~i~~~~v~~l~~~----~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~~~~giDilIlgG 237 (557)
T 3c9f_A 170 KRFNSGTRVTPMAETIHEPWFQEALKH----EVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQFFPDTIIQYFGG 237 (557)
T ss_dssp CCCCTTEEECCHHHHTTSHHHHHHTTS----CCSEEEEECSSCCCTTT------CH-H-HHHHHHHHHHCTTSEEEEEEC
T ss_pred CCCCCCcEECCHHHHHHHHHHHHHHhc----CCCEEEEecccCccccC------cc-c-cHHHHHHHHhCCCCCEEEECC
Confidence 100 01112 1 466655532 56779999999863110 01 1 222222333 48995 9999
Q ss_pred Ccccce
Q 013955 324 HVHAYE 329 (433)
Q Consensus 324 H~H~y~ 329 (433)
|.|...
T Consensus 238 HtH~~~ 243 (557)
T 3c9f_A 238 HSHIRD 243 (557)
T ss_dssp SSCCEE
T ss_pred CCCCCC
Confidence 999873
No 39
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=98.31 E-value=1.1e-05 Score=74.11 Aligned_cols=186 Identities=18% Similarity=0.150 Sum_probs=97.0
Q ss_pred eEEEEEecCCCCCCh----HHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCc
Q 013955 137 ITFAVAGDLGQTGWT----KSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPL 212 (433)
Q Consensus 137 ~~f~~~gD~~~~~~~----~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~ 212 (433)
+|++++||.= +... ...++++++.. |++|..|+.+..+.... ....+.+..+ .+-+ .++||||+... .
T Consensus 1 m~ilf~GDv~-g~~G~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~--~~~~~~l~~~--G~Da-~TlGNHefD~~-~ 72 (255)
T 1t70_A 1 MRVLFIGDVF-GQPGRRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMH--RDAARGALEA--GAGC-LTLGNHAWHHK-D 72 (255)
T ss_dssp CEEEEECCBB-HHHHHHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCC--HHHHHHHHHH--TCSE-EECCTTTTSST-T
T ss_pred CEEEEEeccC-ChHHHHHHHHHHHHHHhhC-CEEEECCCCccCCcCCC--HHHHHHHHhC--CCCE-EEeccccccCc-h
Confidence 5899999982 2112 34556666566 99999888876542211 1222223222 2444 46799999642 1
Q ss_pred cccccccccc----ccccCCCC--CCCCCCceEEEEeCeEE--EEEEcccCCCCCChHHHHHHHHHhhccccCCCCeEEE
Q 013955 213 IMDAFQSYNA----RWKMPFEE--SGSNSNLYYSFDVAGAH--LIMLGSYADYDEYSDQYRWLKDDLSKVDRKKTPWLLV 284 (433)
Q Consensus 213 ~~~~~~~y~~----~~~~p~~~--~~~~~~~~ys~~~g~v~--fi~lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 284 (433)
...+.+ +.-.|.|- .+..+..|.-++.++.+ ++.|-+.........-.+-+++.+++. +.+.+||
T Consensus 73 ----l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~d~IIv 145 (255)
T 1t70_A 73 ----IYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DLGTVFV 145 (255)
T ss_dssp ----HHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SCCEEEE
T ss_pred ----HHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CCCEEEE
Confidence 111111 11123221 12223556667887744 555544321112222344466666655 4567999
Q ss_pred EecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCC
Q 013955 285 LLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGN 354 (433)
Q Consensus 285 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~ 354 (433)
.+|.-. ....+.+.. .-..+||+++.||+|.......+. ++|+.|++ .|..|.
T Consensus 146 ~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d~~il-----~~gt~~i~d~G~~G~ 199 (255)
T 1t70_A 146 DFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTADTRIL-----KGGTAYQTDAGFTGP 199 (255)
T ss_dssp EEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBSCCEEE-----TTTEEEESCCCCBEE
T ss_pred EeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEc-----CCCeEEEEcCccccc
Confidence 999521 111222322 223469999999999864432221 36888876 244343
No 40
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.26 E-value=1.4e-05 Score=74.39 Aligned_cols=188 Identities=15% Similarity=0.125 Sum_probs=97.3
Q ss_pred CCeEEEEEecCCCCCC---hHHHHHHhhcC-CCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCC
Q 013955 135 FPITFAVAGDLGQTGW---TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESI 210 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~---~~~~l~~i~~~-~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~ 210 (433)
..+|++++||++...- ....++++++. ++|+++..||.+..+... .....+.+..+ .+- ..++||||++..
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~~~~d~vi~Ngen~~gG~g~--~~~~~~~ln~~--G~D-a~TlGNHefD~g 77 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTHGKGL--SLKHYEFLKEA--GVN-YITMGNHTWFQK 77 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHHHTCSEEEEECTBTTTTSSC--CHHHHHHHHHH--TCC-EEECCTTTTCCG
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCCc--CHHHHHHHHhc--CCC-EEEEccCcccCC
Confidence 3589999999963211 12344555443 689999999998655321 12222233322 233 347899999653
Q ss_pred Ccccccccc---cccccccCCCCCCC-CCCceEEEEeCeEE--EEEEcccCCCC--CChHHHHHHHHHhhccccCCCCeE
Q 013955 211 PLIMDAFQS---YNARWKMPFEESGS-NSNLYYSFDVAGAH--LIMLGSYADYD--EYSDQYRWLKDDLSKVDRKKTPWL 282 (433)
Q Consensus 211 ~~~~~~~~~---y~~~~~~p~~~~~~-~~~~~ys~~~g~v~--fi~lds~~~~~--~~~~Q~~WL~~~L~~~~~~~~~~~ 282 (433)
+... .+-. ....-+.|...... .+..|.-++.++++ ++.+-+...+. ....-.+.+++.++ +.+.+.+
T Consensus 78 ~~~~-~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~---~~~~diI 153 (281)
T 1t71_A 78 LDLA-VVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL---KRDCDLH 153 (281)
T ss_dssp GGHH-HHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---TCCCSEE
T ss_pred ccHH-HHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---hcCCCEE
Confidence 1110 0100 01111222211000 23456667887744 55554432122 12223445666665 2367789
Q ss_pred EEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE
Q 013955 283 LVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT 348 (433)
Q Consensus 283 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~ 348 (433)
||.+|.-. ....+.+.. .-..+||+++.||+|.......+. ++|+.|++
T Consensus 154 Iv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~d~~il-----~~gt~~i~ 202 (281)
T 1t71_A 154 IVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSADLRIT-----PKGSAYIT 202 (281)
T ss_dssp EEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCTTCEEC-----TTSCEEES
T ss_pred EEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCceEEe-----cCCcEEEe
Confidence 99999521 111222322 223469999999999864332221 46888876
No 41
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=98.22 E-value=1.2e-05 Score=73.55 Aligned_cols=187 Identities=18% Similarity=0.237 Sum_probs=96.2
Q ss_pred eEEEEEecC-CCCC--ChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcc
Q 013955 137 ITFAVAGDL-GQTG--WTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKESIPLI 213 (433)
Q Consensus 137 ~~f~~~gD~-~~~~--~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~ 213 (433)
+|++++||. |..+ .....++++++.. |++|..|..+..+.... ....+.+..+ .+-++ +.|||+++.. .
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~--~~~~~~l~~~--G~D~~-T~GNHefD~~-~- 72 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDRY-DLVIANGENAARGKGLD--RRSYRLLREA--GVDLV-SLGNHAWDHK-E- 72 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC--HHHHHHHHHH--TCCEE-ECCTTTTSCT-T-
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC--HHHHHHHHhC--CCCEE-EeccEeeECc-h-
Confidence 589999998 2111 1234566666666 99888777664433211 2222223222 24554 7899999653 1
Q ss_pred cccccccccc--cccCCCC-CCCCCCceEEEEeCeEEEEEEc--ccCCCCCChHHHHHHHHHhhccccCCCCeEEEEecc
Q 013955 214 MDAFQSYNAR--WKMPFEE-SGSNSNLYYSFDVAGAHLIMLG--SYADYDEYSDQYRWLKDDLSKVDRKKTPWLLVLLHV 288 (433)
Q Consensus 214 ~~~~~~y~~~--~~~p~~~-~~~~~~~~ys~~~g~v~fi~ld--s~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~ 288 (433)
...+.+. .-.|.|- .+..+..|.-++.++.++-+++ ..........-.+-+++.+++.+ .+.+||.+|.
T Consensus 73 ---l~~~l~~~~~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~IIv~~H~ 146 (252)
T 2z06_A 73 ---VYALLESEPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYVLVEVHA 146 (252)
T ss_dssp ---HHHHHHHSSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEEEEEEEC
T ss_pred ---HHHHhccCCceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEEEEEeCC
Confidence 1111111 1122221 1122356677888876655554 32211111222333555555542 5679999996
Q ss_pred cccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccceeeeeccCCccCCCccEEEE-ECCCCC
Q 013955 289 PWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYERSIRVNNGKPDPCGAVYIT-IGDGGN 354 (433)
Q Consensus 289 P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~g~~yi~-~G~gG~ 354 (433)
-. ....+.+.. .-..+||+|+-||+|.......+. ++|+.|++ .|..|.
T Consensus 147 g~-----------tsek~~la~-~~dg~Vd~VvGgHTHv~t~d~~il-----~~gt~~itd~G~~G~ 196 (252)
T 2z06_A 147 EA-----------TSEKMALAH-YLDGRASAVLGTHTHVPTLDATRL-----PKGTLYQTDVGMTGT 196 (252)
T ss_dssp SC-----------HHHHHHHHH-HHBTTBSEEEEESSCSCBSCCEEC-----TTSCEEESCCCCBEE
T ss_pred Cc-----------HHHHHHHHH-hCCCCeEEEEcCCCCcCCCccEEc-----CCCcEeecCCccccc
Confidence 32 111122222 233469999999999864332222 46888886 243343
No 42
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=98.12 E-value=3.2e-05 Score=74.57 Aligned_cols=60 Identities=13% Similarity=0.230 Sum_probs=32.5
Q ss_pred HHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCcccce
Q 013955 266 WLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHAYE 329 (433)
Q Consensus 266 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~y~ 329 (433)
-+++.+++.+.++.+.+|+++|............+. ....|..-+ -++|++|.||.|...
T Consensus 195 ~~~~~v~~Lk~~g~D~II~l~H~G~~~d~~~~~~e~--~~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 195 SANETIPKMKAEGADVIIALAHTGIEKQAQSSGAEN--AVFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCCCSSCCCTTCSS--CHHHHHHHC--SCCCEEEECSSCCEE
T ss_pred HHHHHHHHHHhcCCCEEEEEeccCccccccccccch--hHHHHHhcC--CCCcEEEECCCCccC
Confidence 344444333333577899999987643221111111 111222212 479999999999853
No 43
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.84 E-value=0.00022 Score=68.53 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=41.5
Q ss_pred CCeEEEEEecCCCCCC-----------------hHHHHHHhhcCCCc-eEEccccccccccchhhHHHhh--------hh
Q 013955 135 FPITFAVAGDLGQTGW-----------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHRWDTFG--------EL 188 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-----------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~w~~~~--------~~ 188 (433)
-.++|+..+|+|..-. ....++++++..++ ++|..||++..... ..+.... ..
T Consensus 7 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~ar~at~i~~~r~~~~n~llld~GD~~qGs~~-~~~~~~~~~~~g~~~p~ 85 (339)
T 3jyf_A 7 VDLRIMETTDLHSNMMDFDYYKDAATEKFGLVRTASLIEQARAEVKNSVLVDNGDVIQGSPL-GDYMAAKGLKEGDVHPV 85 (339)
T ss_dssp EEEEEEEECCCTTCCSSEETTTTEECSSCCHHHHHHHHHHHHHTCSCEEEEECSCCSSSSHH-HHHHHHHCCCTTCCCHH
T ss_pred eeEEEEEEeeCCCCcccccccCCCccccCCHHHHHHHHHHHHhhCCCEEEEECCCCCCCchh-HHhhhhcccccccchHH
Confidence 3588999999985321 12345666666665 77899999965432 1121110 01
Q ss_pred hhhhhhCCCceeccCCCcCCC
Q 013955 189 VQPLASARPWMVTQGNHEKES 209 (433)
Q Consensus 189 ~~~l~~~iP~~~v~GNHD~~~ 209 (433)
++.+..--.=+.++||||+..
T Consensus 86 ~~~mn~lg~D~~t~GNHEfd~ 106 (339)
T 3jyf_A 86 YKAMNTLNYAVGNLGNHEFNY 106 (339)
T ss_dssp HHHHTTSCCSEEECCGGGGTT
T ss_pred HHHHHhcCCCEEecchhhhhc
Confidence 122221122355789999964
No 44
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.71 E-value=0.00053 Score=70.20 Aligned_cols=170 Identities=16% Similarity=0.127 Sum_probs=84.4
Q ss_pred CeEEEEEecCCCCCC---------------------hHHHHHHhhcCCCc-eEEccccccccccchhh--HHHhhhhhhh
Q 013955 136 PITFAVAGDLGQTGW---------------------TKSTLDHIGQCKYD-VHLLPGDLSYADYMQHR--WDTFGELVQP 191 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~---------------------~~~~l~~i~~~~pd-~vl~~GD~~~~~~~~~~--w~~~~~~~~~ 191 (433)
.++|+..+|+|..-. ....++++++.+++ ++|..||++........ .....+.+..
T Consensus 3 ~LtILhtnD~Hg~l~~~~~~~~~~~~~~~~~GG~arlat~i~~~r~~~~n~llldaGD~~qGs~~~~~~~g~~~i~~mN~ 82 (530)
T 4h1s_A 3 ELTILHTNDVHSRLEQTSEDSSKCVNASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFMNA 82 (530)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCCSTTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSCSSHHHHHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCCcccCcccccccccccccCcHHHHHHHHHHHHhhCcCeEEEEeCCcccchHHHHHhCChHHHHHHhc
Confidence 478999999974210 12344555555665 67779999976543111 1111222222
Q ss_pred hhhCCCceeccCCCcCCCCCcccccc-cccccccccCC---CC--C-------CCCCCceEEEEeCeEE--EEEEcccC-
Q 013955 192 LASARPWMVTQGNHEKESIPLIMDAF-QSYNARWKMPF---EE--S-------GSNSNLYYSFDVAGAH--LIMLGSYA- 255 (433)
Q Consensus 192 l~~~iP~~~v~GNHD~~~~~~~~~~~-~~y~~~~~~p~---~~--~-------~~~~~~~ys~~~g~v~--fi~lds~~- 255 (433)
+ -.=..++||||+..... .+ ..+.+....|. |- . ...-..|--++.++++ ||.+-+..
T Consensus 83 l---gyDa~~lGNHEFd~G~~---~l~~~~~~~a~fp~L~aNv~~~~~~~~~~~~~~~py~I~~~~g~kIgviGltt~~~ 156 (530)
T 4h1s_A 83 L---RYDAMALGNHEFDNGVE---GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKET 156 (530)
T ss_dssp T---TCCEEECCGGGGTTTTH---HHHTTTTTTCSSCEECTTEEECTTHHHHHTTTSBSEEEEEETTEEEEEEEEECTTH
T ss_pred c---CCCEEEEchhhhccCHH---HHHHHHHhhCCCCEEEEeeeccCCcccccCCcccceEEEEeccEEEeeccccccce
Confidence 2 22355899999964321 11 11111111121 10 0 0011345567788755 55554421
Q ss_pred ----CC------CCChHHHHHHHHHhhccccCCCCeEEEEecccccCCCCCCCCCChhHHHHHHHHHHHc-CCcEEEecC
Q 013955 256 ----DY------DEYSDQYRWLKDDLSKVDRKKTPWLLVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAA-SVDLVLAGH 324 (433)
Q Consensus 256 ----~~------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~VdlvlsGH 324 (433)
.. ...-+..+...+.|++ .+.+.+|+++|.... .-. .+.++. ++|++|.||
T Consensus 157 ~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~------------~d~---~la~~v~giD~IlgGH 218 (530)
T 4h1s_A 157 PFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE------------MDK---LIAQKVRGVDVVVGGH 218 (530)
T ss_dssp HHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH------------HHH---HHHHHSTTCCEEECCS
T ss_pred eeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch------------HHH---HHHhcCCCCCeeccCC
Confidence 00 1112223333333443 256679999997521 111 223333 799999999
Q ss_pred cccce
Q 013955 325 VHAYE 329 (433)
Q Consensus 325 ~H~y~ 329 (433)
+|..-
T Consensus 219 sH~~~ 223 (530)
T 4h1s_A 219 SNTFL 223 (530)
T ss_dssp SCCCB
T ss_pred cccee
Confidence 99753
No 45
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.56 E-value=0.00091 Score=54.15 Aligned_cols=91 Identities=16% Similarity=0.084 Sum_probs=60.0
Q ss_pred ccCCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEE
Q 013955 32 EFPWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (433)
Q Consensus 32 ~~~~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (433)
+.+....+...|..|++.-.+.+++.|.|....... .-.|+|.......... ... ......
T Consensus 11 ~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~--------~~~---~~~~~~ 79 (123)
T 2edd_A 11 SVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKY--------KSE---DTTSLS 79 (123)
T ss_dssp SCSSCCCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCC--------CCE---EESSSE
T ss_pred CCCccCCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccE--------EEE---eCCceE
Confidence 345556777899999998778999999999653221 4467787653211100 000 001335
Q ss_pred EEeCCCCCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 104 TVIGPLEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 104 v~l~~L~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
++|+||+|+|.|.++|.. .|....|+|.+.
T Consensus 80 ~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 80 YTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp EEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred EEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 789999999999999964 356778888663
No 46
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.48 E-value=0.0011 Score=52.38 Aligned_cols=87 Identities=21% Similarity=0.264 Sum_probs=56.8
Q ss_pred CCCCCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCC--CeeEEeeeeEEeeeeeecCeEEEEEeCC
Q 013955 37 PKPSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGY--NCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 108 (433)
..+...|..+.+... +.+++.|.|....... .-.|+|....... .+.... .......+.|++
T Consensus 6 ~~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~ 75 (114)
T 2ede_A 6 SGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMET----------ISGDRLTHQIMD 75 (114)
T ss_dssp CCCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEE----------EETTCCEEEECS
T ss_pred CCCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEE----------ECCCceEEEEcC
Confidence 355678999988877 6789999999774322 3456676543211 111110 112234578999
Q ss_pred CCCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 109 LEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 109 L~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
|+|++.|.+||.. .|....|+|++.
T Consensus 76 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 108 (114)
T 2ede_A 76 LNLDTMYYFRIQARNSKGVGPLSDPILFRTLKV 108 (114)
T ss_dssp CCSSCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred CCCCCEEEEEEEEEeCCcCcCCcccEEEEecCC
Confidence 9999999999964 256678888664
No 47
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=97.44 E-value=0.00099 Score=52.83 Aligned_cols=90 Identities=11% Similarity=0.137 Sum_probs=56.7
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
+..+...|..+.+...+.+++.|.|..... ...-.|+|.............. ...+....++|++|
T Consensus 5 ~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L 76 (114)
T 1x4y_A 5 SSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--------MVEGDRYWHSISHL 76 (114)
T ss_dssp CCSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--------EEETTCCEEEECSC
T ss_pred ccCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeE--------ecCCcEeEEEcCCC
Confidence 345667899998887779999999997741 1224566755432210000000 00111235789999
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
+|+|.|.++|.. .|+...++|.+.
T Consensus 77 ~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~ 108 (114)
T 1x4y_A 77 QPETSYDIKMQCFNEGGESEFSNVMICETKAR 108 (114)
T ss_dssp CTTCEEEEEEEEECTTCCCCCCCCEEEECCCC
T ss_pred CCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 999999999964 256778888654
No 48
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=97.31 E-value=0.0017 Score=50.68 Aligned_cols=86 Identities=19% Similarity=0.157 Sum_probs=52.8
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
.|+. |..+.+...+.+ +.|.|....... .-.|+|........ ...-. . . ...+....++|++|+|+
T Consensus 6 ~P~~-P~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~-~~~~~----~-~-~~~~~~~~~~i~~L~p~ 76 (105)
T 2haz_A 6 TPSS-PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVW-HSKWY----D-A-KEASMEGIVTIVGLKPE 76 (105)
T ss_dssp CCCC-CEEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCC-EEEEE----E-H-HHHHHHSEEEECSCCTT
T ss_pred CCcC-CCCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCC-ccceE----E-c-cccCCccEEEECCCCCC
Confidence 4444 888887766666 999999764321 23567766543211 10000 0 0 01112345689999999
Q ss_pred CEEEEEecc--------cCCeeEEECCC
Q 013955 113 TVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+.|.+||.. .|+...|+|.|
T Consensus 77 t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 77 TTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp CEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 999999964 25677888876
No 49
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.30 E-value=0.00064 Score=54.18 Aligned_cols=84 Identities=17% Similarity=0.195 Sum_probs=54.4
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
.+...|..|++...+.+++.|+|.-..... .-.|+|......... +.. .......+.|+||
T Consensus 7 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~--------~~~---~~~~~~~~~i~gL 75 (113)
T 1x5j_A 7 GPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK--------YKN---ANATTLSYLVTGL 75 (113)
T ss_dssp CCCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC--------CEE---CCBCSSEEEEESC
T ss_pred CCCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeE--------EEE---EecCcCEEEeCCC
Confidence 456689999999888999999998654221 345677653111000 000 1112345789999
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+|+|.|.++|.. .|....++|.+
T Consensus 76 ~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~ 106 (113)
T 1x5j_A 76 KPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 106 (113)
T ss_dssp CTTCEECCEEEEECSSCBCCCCCCCCEECCC
T ss_pred CCCcEEEEEEEEecCCccCCCcccEEeeccC
Confidence 999999999864 24566777755
No 50
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.30 E-value=0.0047 Score=49.06 Aligned_cols=84 Identities=21% Similarity=0.258 Sum_probs=55.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCC-CC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDD-ES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
...|..+++...+.+++.|.|.... .. ..-.|+|............ ........+.|++|+|++.
T Consensus 18 P~~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 87 (120)
T 1x5f_A 18 PSAPRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN----------TSHPGEMQVTIQNLMPATV 87 (120)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE----------CSSTTCSEEEECSCCTTCE
T ss_pred CCCCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE----------eccCCccEEEeCCCCCCCE
Confidence 3578999888778999999998764 22 2245677665322111100 0112244578999999999
Q ss_pred EEEEecc--------cCCeeEEECCCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
|.+||.. .+....|+|.+.
T Consensus 88 Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 88 YIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 9999964 256677888653
No 51
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.28 E-value=9.9e-05 Score=68.43 Aligned_cols=65 Identities=17% Similarity=0.125 Sum_probs=42.4
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCC-ceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~p-d~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
.+++++||+|.... ..++++.+...++ |.+|++||+++.+.... + ..+.+. ..+++.++||||..
T Consensus 19 ~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~~~~--~-~l~~l~----~~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 19 GRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSF--G-VVRLLK----RLGAYSVLGNHDAK 85 (262)
T ss_dssp SCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSSCHH--H-HHHHHH----HHTCEECCCHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCCCHH--H-HHHHHH----HCCCEEEeCcChHH
Confidence 48999999984311 2344555555555 99999999998654321 1 122222 24899999999973
No 52
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.23 E-value=0.00053 Score=53.05 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=51.3
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC--CC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDD--ES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
.++..|..+++...+.+++.|.|.... .. ..-.|+|............+ ....+.|+||+|
T Consensus 7 ~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p 73 (103)
T 2edy_A 7 GPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKP 73 (103)
T ss_dssp CCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCT
T ss_pred CCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCC
Confidence 455678888777666899999999872 11 22356666554321111111 122357899999
Q ss_pred CCEEEEEecc--------cCCeeEEECCC
Q 013955 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
++.|.++|.. .|....|+|.|
T Consensus 74 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 74 DTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp TCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred CCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 9999999964 24555666654
No 53
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=97.12 E-value=0.0035 Score=48.71 Aligned_cols=74 Identities=15% Similarity=0.240 Sum_probs=48.0
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCC--CeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGY--NCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
.|+..|..+.+...+++++.|+|..... ...-.|.|....... ..... . ..+....+.|++|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~----~------v~~~~~~~~l~~L 72 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRD----V------VEGSKQWHMIGHL 72 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEE----E------EETTCSEEEECSC
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEE----E------EcCCceEEECCCC
Confidence 4677899998887789999999987642 122367787654321 11100 0 0111224689999
Q ss_pred CCCCEEEEEecc
Q 013955 110 EHDTVYFYRCGR 121 (433)
Q Consensus 110 ~p~t~Y~Y~v~~ 121 (433)
+|+|.|.++|..
T Consensus 73 ~p~t~Y~v~V~A 84 (102)
T 3n1f_C 73 QPETSYDIKMQC 84 (102)
T ss_dssp CTTCEEEEEEEE
T ss_pred CCCCEEEEEEEE
Confidence 999999999964
No 54
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.11 E-value=0.00025 Score=66.28 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=42.9
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhc-CCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQ-CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~-~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~ 208 (433)
++++++||+|.... ..++++.+.. .++|.++++||+++.+.... ...+.+..+. .+++.+.||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~~~~d~~v~lGD~vdrG~~s~---~~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSL---DVLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCCTTTCEEEECSCCSSSSSCHH---HHHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCcCCCCCccH---HHHHHHHhCC--CceEEEECCCcHH
Confidence 46899999985421 2344455544 57899999999998665321 1222333332 3799999999973
No 55
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.08 E-value=0.0016 Score=50.98 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=51.2
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+...+.+++.|.|....... .-.|+|............+ . ...+.|++|+|++.|
T Consensus 8 P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~v~~L~p~t~Y 74 (106)
T 1x4x_A 8 PDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-----------P--GLSYEIKGLSPATTY 74 (106)
T ss_dssp CCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-----------S--CSEEEEESCCSSCEE
T ss_pred cCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-----------C--cceEEEcCCCCCCEE
Confidence 3467777777667899999998764322 2356665543221111111 1 124678899999999
Q ss_pred EEEecc--------cCCeeEEECCCC
Q 013955 116 FYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.|||.. .|+...++|++.
T Consensus 75 ~frV~A~n~~G~g~~S~~v~~~T~~~ 100 (106)
T 1x4x_A 75 YCRVQALSVVGAGPFSEVVACVTPPS 100 (106)
T ss_dssp EEEEEEECSSCCCCBCCCEEEECCCC
T ss_pred EEEEEEEcCCcCCCCcCCEEEECCCC
Confidence 999964 256678888653
No 56
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.08 E-value=0.0019 Score=50.40 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=51.9
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|..+++...+.+++.|.|.-...... -.|+|............ .......+.|++|+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~l~~L~p~t~Y~~ 78 (108)
T 2djs_A 10 TVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSM-----------ARSQTNTARIDGLRPGMVYVV 78 (108)
T ss_dssp CCSCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEE-----------EEESSSEEEEESCCTTCEEEE
T ss_pred CCcceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeE-----------EecCccEEEEcCCCCCCEEEE
Confidence 677777777778999999988744332 24555554322111100 001123467899999999999
Q ss_pred Eecc--------cCCeeEEECCCC
Q 013955 118 RCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 118 ~v~~--------~s~~~~F~T~p~ 133 (433)
||.. .|....|+|++.
T Consensus 79 ~V~A~n~~G~g~~S~~~~~~T~~~ 102 (108)
T 2djs_A 79 QVRARTVAGYGKFSGKMCFQTLTD 102 (108)
T ss_dssp EEEEEESSCEEEECCCEEEECCCS
T ss_pred EEEEEeCCEECCCCCCEEEEeCCC
Confidence 9964 356778888775
No 57
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.03 E-value=0.0028 Score=50.48 Aligned_cols=88 Identities=19% Similarity=0.229 Sum_probs=55.4
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
+..+...|..+++...+.+++.|.|..... ...-.|+|........... .. ...+....+.|+||+|++
T Consensus 15 ~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~-----~~----~~~~~~~~~~i~~L~p~t 85 (119)
T 2ee2_A 15 QDAPSEAPTEVGVKVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAAN-----RV----QVTSQEYSARLENLLPDT 85 (119)
T ss_dssp SCCCCCCCCSCEEEEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCE-----EE----EEETTCSEEEECSCCTTC
T ss_pred CcCCCCCCCcEEEEEccCCEEEEEecCCCCCccceEEEEEEECCCcccCcE-----EE----EcCCCEeEEEECCCCCCC
Confidence 345666787888877779999999987742 2234566755432111000 00 011223457899999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.++|.. .|....|+|.+
T Consensus 86 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ee2_A 86 QYFIEVGACNSAGCGPPSDMIEAFTKK 112 (119)
T ss_dssp EEEEEEEEECSSSCCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999964 24567788854
No 58
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.01 E-value=0.003 Score=49.22 Aligned_cols=73 Identities=11% Similarity=0.158 Sum_probs=47.7
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
+...|..+++...+.+++.|.|.-......-.|+|............ .. ...+. .+.|+||+|+|.|.++
T Consensus 8 ~~~~P~~l~~~~~~~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~----~~----~~~~~--~~~l~~L~p~t~Y~~~ 77 (104)
T 2dkm_A 8 PLPPPRALTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEER----EV----QVGRP--EVLLDGLEPGRDYEVS 77 (104)
T ss_dssp SCCCCCCCEEEEECSSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE----EE----EESSS--EEEEESCCTTCCEEEE
T ss_pred CCCCCceeEEEecCCCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE----EE----ecCCC--EEEECCCCCCCEEEEE
Confidence 44578899888888999999997664333345677654322111000 00 01122 6889999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 78 V~A 80 (104)
T 2dkm_A 78 VQS 80 (104)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 59
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.01 E-value=0.0063 Score=48.14 Aligned_cols=84 Identities=17% Similarity=0.266 Sum_probs=53.6
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
....|..+.+...+.+++.|.|.-...... -.|+|............ ........+.|++|+|++.
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~ 86 (119)
T 2ed7_A 17 LPSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----------TTQPGSLQLTVGNLKPEAM 86 (119)
T ss_dssp SCCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----------CCCTTCCEEEECSCCSSSE
T ss_pred CCcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----------eecCCceEEEeCCCCCCCE
Confidence 345788888887789999999987643322 24455544322111100 1112244578999999999
Q ss_pred EEEEecc--------cCCeeEEECCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.+||.. .|+...++|.+
T Consensus 87 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 112 (119)
T 2ed7_A 87 YTFRVVAYNEWGPGESSQPIKVATQP 112 (119)
T ss_dssp EEECCEEEESSCBCSCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCcCCEEEEeCC
Confidence 9999864 25667788865
No 60
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=97.00 E-value=0.0076 Score=46.88 Aligned_cols=82 Identities=18% Similarity=0.204 Sum_probs=51.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...+.+++.|+|.-.... ..-.|+|........... . ...+....+.|+||+||+.|.++|
T Consensus 4 ~~P~~l~v~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~------~----~v~~~~~~~~l~~L~p~t~Y~~~V 73 (104)
T 2rb8_A 4 DAPSQIEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTT------I----DLTEDENQYSIGNLKPDTEYEVSL 73 (104)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEE------E----EEETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCccEEEEecCCeEEEEEcCCCCccceEEEEEEECcCCCceEE------E----EcCCCcCEEEeCCCCCCCEEEEEE
Confidence 47889988877799999999866422 223567765432111110 0 011223456899999999999998
Q ss_pred ccc-------CCeeEEECCC
Q 013955 120 GRQ-------GPEFEFKTPP 132 (433)
Q Consensus 120 ~~~-------s~~~~F~T~p 132 (433)
... .....|+|.+
T Consensus 74 ~A~~~~g~s~p~~~~~~T~~ 93 (104)
T 2rb8_A 74 ISRRGDMSSNPAKETFTTGL 93 (104)
T ss_dssp EEEETTEECCCEEEEEECCC
T ss_pred EEEeCCccCCCEEEEEECCC
Confidence 641 2235678765
No 61
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=97.00 E-value=0.0077 Score=46.42 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=47.4
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...+.+++.|+|.-+... ..-.|+|............ ........++|+||+|+|.|.++|
T Consensus 3 ~~P~~l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~----------~~~~~~t~~~i~~L~p~t~Y~~~V 72 (100)
T 3b83_A 3 QPPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTV----------DLTSSITSLTLTNLEPNTTYEIRI 72 (100)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEE----------EECTTEEEEEECSCCTTCEEEEEE
T ss_pred ccCCccEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEE----------EECCcceEEEECCCCCCCEEEEEE
Confidence 46888988877799999999876432 2346777655422111100 012334567899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~A 74 (100)
T 3b83_A 73 VA 74 (100)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 62
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=96.99 E-value=0.0086 Score=46.61 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=50.6
Q ss_pred CCceEEEEe--cCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 42 HPQQVHISL--AGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 42 ~p~qv~l~~--~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.|..+.+.. .+.+++.|.|.-...... -.|+|............ ... ..+.|++|+|++.|
T Consensus 10 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~--~~~~l~~L~p~t~Y 76 (108)
T 2dm4_A 10 APRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQR-----------AAS--NFTEIKNLLVNTLY 76 (108)
T ss_dssp SCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEE-----------ESS--SEEEECSCCSSCEE
T ss_pred CCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEec-----------CCc--cEEEeCCCCCCCEE
Confidence 788888776 358899999998753222 34556554432111111 111 25789999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.+||.. .|+...++|.+
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 77 TVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEEEEEECCCceeCCCCCEEEECCC
Confidence 999964 25667788854
No 63
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.94 E-value=0.0066 Score=47.07 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=51.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|..+++...+.+++.|.|...... ..-.|+|............ .. ...+.|++|+|++.|.+
T Consensus 10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~--~~~~~i~~L~p~t~Y~~ 76 (106)
T 2ed8_A 10 PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIE-----------VD--GLSYKLEGLKKFTEYSL 76 (106)
T ss_dssp CCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEE-----------EC--SSCEEEESCCTTCEEEE
T ss_pred CCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEe-----------CC--ccEEEECCCCCCCEEEE
Confidence 7889988877789999999977422 2235666654432111110 01 23467899999999999
Q ss_pred Eecc--------cCCeeEEECCC
Q 013955 118 RCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 118 ~v~~--------~s~~~~F~T~p 132 (433)
||.. .|....++|..
T Consensus 77 ~V~A~n~~G~g~~S~~~~~~T~~ 99 (106)
T 2ed8_A 77 RFLAYNRYGPGVSTDDITVVTLS 99 (106)
T ss_dssp EEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEeCCccCCCcCCEEEEcCC
Confidence 9964 24567788754
No 64
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.91 E-value=0.0071 Score=48.02 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=57.3
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
+..+...|..+++...+.+++.|.|..... ...-.|+|............-. . ....+....+.|++|
T Consensus 12 ~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~i~~L 85 (122)
T 1va9_A 12 EAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV----E--MKATGDSEVYTLDNL 85 (122)
T ss_dssp CCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC----B--CCCCSSEEEEEEESC
T ss_pred CCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEE----E--EecCCceeEEEeCCC
Confidence 345566788999887779999999998753 1223566765542211000000 0 011234567789999
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+|++.|.++|.. .|....|+|.+
T Consensus 86 ~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 116 (122)
T 1va9_A 86 KKFAQYGVVVQAFNRAGTGPSSSEINATTLE 116 (122)
T ss_dssp CSSCCEEEEEEEEETTEECCCCCCEECCCCS
T ss_pred CCCCEEEEEEEEEcCCCCCCCccCEEEEeCC
Confidence 999999999964 24556777754
No 65
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.90 E-value=0.0032 Score=49.28 Aligned_cols=82 Identities=12% Similarity=0.200 Sum_probs=51.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.....+++.|.|....... .-.|+|............ .......+.|++|+|++.|.
T Consensus 12 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~ 80 (111)
T 1x5l_A 12 SQVVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYST-----------LKAVTTRATVSGLKPGTRYV 80 (111)
T ss_dssp CCCCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEE-----------EEESSSEEEECSCCTTCEEE
T ss_pred CCCceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEE-----------ecCCCCEEEEcCCCCCCEEE
Confidence 357777766566899999998764322 235667655321111000 01112356789999999999
Q ss_pred EEecc--------cCCeeEEECCCC
Q 013955 117 YRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~p~ 133 (433)
+||.. .|....|+|++.
T Consensus 81 ~~V~A~n~~G~g~~S~~~~~~T~~~ 105 (111)
T 1x5l_A 81 FQVRARTSAGCGRFSQAMEVETGKP 105 (111)
T ss_dssp ECEEEEETTEECCCCCCEEEECCCT
T ss_pred EEEEEEeCCcCCCCcccEEEEcCCC
Confidence 99964 356788888765
No 66
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.90 E-value=0.0044 Score=47.87 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=51.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
..|..+.+...+.++++|.|..... ...-.|+|........+.... ......+.|++|+|++.|.||
T Consensus 9 ~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~~ 77 (106)
T 2dju_A 9 KPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD-----------GVATTRYSIGGLSPFSEYAFR 77 (106)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC-----------CCCSSEEEEESCCTTCEEEEE
T ss_pred cCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc-----------CCCccEEEEeCCCCCcEEEEE
Confidence 4788888887678999999997631 123456676554321111100 011223578899999999999
Q ss_pred ecc--------cCCeeEEECCC
Q 013955 119 CGR--------QGPEFEFKTPP 132 (433)
Q Consensus 119 v~~--------~s~~~~F~T~p 132 (433)
|.. .|....++|.+
T Consensus 78 V~A~n~~G~~~~S~~~~~~T~~ 99 (106)
T 2dju_A 78 VLAVNSIGRGPPSEAVRARTGE 99 (106)
T ss_dssp EEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEeCCccCCCcccEEeEcCC
Confidence 964 24566777765
No 67
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.88 E-value=0.004 Score=49.15 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=52.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+++...+.+++.|.|...... ..-.|+|............. ....+.|++|+|++.|
T Consensus 18 P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y 84 (116)
T 1x5g_A 18 PGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTEY 84 (116)
T ss_dssp CCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCEE
T ss_pred CcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCEE
Confidence 347788888877799999999876322 23456676554322211111 1235678999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.+||.. .|....|+|.+
T Consensus 85 ~~~V~A~n~~G~g~~S~~~~~~T~~ 109 (116)
T 1x5g_A 85 SFRVVAYNKHGPGVSTPDVAVRTLS 109 (116)
T ss_dssp EEEEEEECSSCCCCBCCCCCEECCC
T ss_pred EEEEEEEcCCCcCCCCCCEEEECCC
Confidence 999964 24566788865
No 68
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.86 E-value=0.0047 Score=48.28 Aligned_cols=81 Identities=19% Similarity=0.286 Sum_probs=49.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
..|....+.-.+.++++|.|...... ..-.|+|........+..... .. ...++|++|+|++.|
T Consensus 9 ~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~--~~~~~v~~L~p~t~Y 77 (109)
T 1x5x_A 9 SMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD---------GE--DLAYTVKNLRRSTKY 77 (109)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE---------ES--CSEEEEESCCSSCEE
T ss_pred cCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe---------CC--ccEEEECCCCCCCEE
Confidence 34555556666789999999876432 223566765443212211100 11 224678899999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.|||.. .|....++|.+
T Consensus 78 ~frV~A~n~~G~s~~S~~~~~~T~~ 102 (109)
T 1x5x_A 78 KFKVIAYNSEGKSNPSEVVEFTTCP 102 (109)
T ss_dssp EEEEEEECSSCEEEECCCEEEECCC
T ss_pred EEEEEEEeCCCCcCCccCEEeEeCC
Confidence 999964 24566777765
No 69
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.81 E-value=0.011 Score=47.56 Aligned_cols=81 Identities=15% Similarity=0.115 Sum_probs=49.2
Q ss_pred CCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccC--CCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 34 PWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSP--GGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 34 ~~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
.+.......|..+.+...+.++++|.|.-..... .-.|+|.... ....+...... ........++|+
T Consensus 12 ~~~~~~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~-------~~~~~~~~~~v~ 84 (124)
T 1wis_A 12 GVPPELPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL-------SNEPDARSMEVP 84 (124)
T ss_dssp CCCCCCCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE-------ESCTTCSEEEEC
T ss_pred cCCCCCCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE-------ccCCCceEEEeC
Confidence 3334456789999888777999999996543222 2456676521 11122111110 011223457889
Q ss_pred CCCCCCEEEEEecc
Q 013955 108 PLEHDTVYFYRCGR 121 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (433)
+|+|++.|.|||..
T Consensus 85 ~L~p~t~Y~frV~A 98 (124)
T 1wis_A 85 DLNPFTCYSFRMRQ 98 (124)
T ss_dssp SCCTTSEECCCCEE
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999964
No 70
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.77 E-value=0.0047 Score=49.36 Aligned_cols=84 Identities=14% Similarity=0.253 Sum_probs=54.9
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCC--C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDE--S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..+...|..+.+.....+++.|.|..... . ..-.|+|........... .......+.|++|+
T Consensus 26 ~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------------~~~~~~~~~i~~L~ 93 (124)
T 2ed9_A 26 DVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------------LEPNNLWYLFTGLE 93 (124)
T ss_dssp CCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------------ECSSCSEEEEECCC
T ss_pred CCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------------ecCCcCEEEEcCCC
Confidence 34555788888877778999999987743 1 123566665543221110 12223456789999
Q ss_pred CCCEEEEEecc--------cCCeeEEECCC
Q 013955 111 HDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|++.|.++|.. .|....|+|+.
T Consensus 94 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 94 KGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp SSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 99999999964 25667788764
No 71
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=96.77 E-value=0.0072 Score=47.27 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=48.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.-.+.+++++.|....... .-.|+|..... .... . .....++|+||+|||.|.
T Consensus 9 s~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--~~~~-----------~--~~~t~~~i~gL~PgT~Y~ 73 (104)
T 2dle_A 9 IQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--SSNL-----------N--VSEPRAVIPGLRSSTFYN 73 (104)
T ss_dssp CBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--EEEE-----------E--ESSSEEECCSCCSSCEEE
T ss_pred CCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--eEEE-----------c--CCCCEEEECCCCCCCEEE
Confidence 356677777677999999998664332 24566654321 0000 0 112357899999999999
Q ss_pred EEeccc-------CCeeEEECCCC
Q 013955 117 YRCGRQ-------GPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~~-------s~~~~F~T~p~ 133 (433)
++|... +....++|.|.
T Consensus 74 ~~V~A~~~~~~~~p~~~~~~T~p~ 97 (104)
T 2dle_A 74 ITVCPVLGDIEGTPGFLQVHTPPV 97 (104)
T ss_dssp EEEEEESSSCCCBCEEEEEECCCC
T ss_pred EEEEEEECCcccCCeeEEEEccCC
Confidence 998641 23456677653
No 72
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=96.77 E-value=0.0014 Score=63.19 Aligned_cols=72 Identities=13% Similarity=-0.035 Sum_probs=44.1
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhc--------CCCceEEccccccccccchhhHHHhhhhhhhhh-----hCCCce
Q 013955 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQ--------CKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-----SARPWM 199 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~l~~i~~--------~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~-----~~iP~~ 199 (433)
....+++++||+|.... ...+++.+.. .++|.+|++||+++.+....+ ....+..+. ...+++
T Consensus 68 ~~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~e---vl~~l~~l~~~~~~~~~~v~ 144 (342)
T 2z72_A 68 LGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNE---VLWFMYQLDQQARDAGGMVH 144 (342)
T ss_dssp CCCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHHH---HHHHHHHHHHHHHHTTCEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHHH---HHHHHHHHHHHHhhCCCeEE
Confidence 45689999999985421 1233333321 157999999999987654221 122222221 224689
Q ss_pred eccCCCcCC
Q 013955 200 VTQGNHEKE 208 (433)
Q Consensus 200 ~v~GNHD~~ 208 (433)
.+.||||..
T Consensus 145 ~v~GNHE~~ 153 (342)
T 2z72_A 145 LLMGNHEQM 153 (342)
T ss_dssp ECCCHHHHH
T ss_pred EEecCCcHH
Confidence 999999973
No 73
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.76 E-value=0.0098 Score=48.07 Aligned_cols=88 Identities=22% Similarity=0.211 Sum_probs=53.8
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcC--CCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITD--DESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~--~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..++..|..+++...+.+++.|.|... ..... -.|+|........... ... ........++|++|+
T Consensus 16 ~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-----~~~---~~~~~~~~~~i~~L~ 87 (134)
T 2edx_A 16 STPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH-----VVD---GISREHSSWDLVGLE 87 (134)
T ss_dssp SCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE-----EEC---CCBTTCSEEEEESCC
T ss_pred CCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE-----EEE---eeCCCccEEEeCCCC
Confidence 355567889988877789999999987 22222 2344544332111000 000 012334567889999
Q ss_pred CCCEEEEEecc--------cCCeeEEECCC
Q 013955 111 HDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|++.|.+||.. .|....++|.+
T Consensus 88 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 117 (134)
T 2edx_A 88 KWTEYRVWVRAHTDVGPGPESSPVLVRTDE 117 (134)
T ss_dssp TTCEEEEEEEEEETTBCCCCCCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCCcCCCCCCEEeecCC
Confidence 99999999964 24556788754
No 74
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.73 E-value=0.0045 Score=48.48 Aligned_cols=80 Identities=14% Similarity=0.193 Sum_probs=52.1
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCC--CCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGG--YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.|..+++...+.+++.|.|.-..... .-.|+|....+. ....... ... ..+.|++|+|++.|
T Consensus 10 ~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~--~~~~i~~L~p~t~Y 77 (109)
T 2e7h_A 10 AVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLK----------TSE--NRAELRGLKRGASY 77 (109)
T ss_dssp CCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEE----------ESS--SEEEEESCCTTSCE
T ss_pred CCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEc----------cCC--CEEEECCCCCCCeE
Confidence 47788888777999999998764322 245667655411 1111110 111 25788999999999
Q ss_pred EEEecc--------cCCeeEEECCCC
Q 013955 116 FYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.+||.. .|+...|+|.+.
T Consensus 78 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 78 LVQVRARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEEEEEeCCccCCCCCCEEEEcCCC
Confidence 999964 256678888764
No 75
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.69 E-value=0.0054 Score=49.50 Aligned_cols=84 Identities=12% Similarity=0.179 Sum_probs=53.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++...+.+++.|.|....... .-.|+|............ . ........+.|++|+|++.|.
T Consensus 29 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~--------~~~~~~~~~~i~~L~p~t~Y~ 99 (130)
T 1wfo_A 29 GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV-E--------VLAPSARQYTATGLKPESVYL 99 (130)
T ss_dssp CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE-E--------EECTTCCEEEEESCCSSSEEE
T ss_pred CCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEE-E--------EeCCCceEEEEcCCCCCCEEE
Confidence 478888888778999999998764322 335666654322110000 0 112234557889999999999
Q ss_pred EEecc--------cCCeeEEECCCC
Q 013955 117 YRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~p~ 133 (433)
+||.. .+....|+|.+.
T Consensus 100 ~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 100 FRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEEEEeCCcCCCCcccEEEecCCC
Confidence 99964 245567888653
No 76
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.65 E-value=0.0049 Score=48.29 Aligned_cols=78 Identities=18% Similarity=0.297 Sum_probs=49.2
Q ss_pred CCCceEEEEecCCCcEEEEE--EcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 41 SHPQQVHISLAGDSHMRVTW--ITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W--~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
..|..+++...+.+++.|.| ....... .-.|+|.... . . ..+... ... ++|+||+|+|.|
T Consensus 11 ~~p~~l~~~~~~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~---~-----~-~~~~~~---~~~---~~i~~L~p~t~Y 75 (107)
T 1x5a_A 11 LSGLSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQD---E-----E-WHQMVL---EPR---VLLTKLQPDTTY 75 (107)
T ss_dssp CCSCCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSS---C-----E-EEEEES---SSE---EEEESCCSSCEE
T ss_pred CCCCceEEEecCCCEEEEEECCCCCCCCCCceEEEEEEEeCC---C-----C-ceEEEe---cce---EEECCCCCCCEE
Confidence 35667777767799999999 6553322 2345565431 0 0 011111 111 789999999999
Q ss_pred EEEecc--------cCCeeEEECCCC
Q 013955 116 FYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.+||.. .|....|+|.+.
T Consensus 76 ~f~V~A~~~~G~g~~S~~~~~~T~~~ 101 (107)
T 1x5a_A 76 IVRVRTLTPLGPGPFSPDHEFRTSPP 101 (107)
T ss_dssp EEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEEECCCccCCCCCCEEEEECCC
Confidence 999964 356678888765
No 77
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=96.63 E-value=0.0015 Score=61.76 Aligned_cols=69 Identities=20% Similarity=0.188 Sum_probs=43.7
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~ 208 (433)
.+++++||+|.... ..++++.+.....+.++++||+++.+....+ ....+..+... -.++.+.||||..
T Consensus 50 ~~i~viGDIHG~~~~L~~ll~~~~~~~~~~~vflGD~VDRG~~s~e---vl~lL~~lk~~~p~~v~~lrGNHE~~ 121 (309)
T 2ie4_C 50 CPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVE---TVTLLVALKVRYRERITILRGNHESR 121 (309)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTSCEEECSCCSSSSTTHHH---HHHHHHHHHHHCTTTEEECCCTTSST
T ss_pred CCEEEEecCCCCHHHHHHHHHHcCCCCCCEEEEeCCccCCCCChHH---HHHHHHHHHhhCCCcEEEEeCCCCHH
Confidence 56899999985421 2334454445567889999999987654221 12233333222 3489999999985
No 78
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.60 E-value=0.0056 Score=48.58 Aligned_cols=88 Identities=18% Similarity=0.289 Sum_probs=53.3
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEe----ccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYG----TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
+..+...|..+++...+.+++.|.|............|. ........ . +.. ........+.|++|+|
T Consensus 15 ~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~---~~~--~~~~~~~~~~i~~L~p 85 (121)
T 2dlh_A 15 EQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVN----N---WMK--HNVADSQITTIGNLVP 85 (121)
T ss_dssp CCCCCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTT----T---SCC--CCCSSCSEECCBSCCS
T ss_pred CcCCCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCcc----c---cEE--EecCCceEEEecCCCC
Confidence 345556888888876678999999998754333333443 32211000 0 000 0011233568899999
Q ss_pred CCEEEEEecc--------cCCeeEEECCC
Q 013955 112 DTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 112 ~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
++.|.+||.. .|+...|+|.+
T Consensus 86 ~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 114 (121)
T 2dlh_A 86 QKTYSVKVLAFTSIGDGPLSSDIQVITQT 114 (121)
T ss_dssp SCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred CCEEEEEEEEEeCCccCCCCCCEEEECCC
Confidence 9999999964 24567888865
No 79
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=96.59 E-value=0.01 Score=58.91 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=80.2
Q ss_pred CCCeEEEEEecCCCCCCh---HH----HHHHhh-----------cCCCceEEccccccccccc-----------------
Q 013955 134 QFPITFAVAGDLGQTGWT---KS----TLDHIG-----------QCKYDVHLLPGDLSYADYM----------------- 178 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~~---~~----~l~~i~-----------~~~pd~vl~~GD~~~~~~~----------------- 178 (433)
.....+++++|+|.+... .. .++.+. ..++.-+|++||.+...+.
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 456789999999887652 11 223332 2468899999999876422
Q ss_pred --hhhHHHhhhhhhhhhhCCCceeccCCCcCCCCCcccccccccccccccCCC-CCCCCCCceEEEEeCeEEEEEEcccC
Q 013955 179 --QHRWDTFGELVQPLASARPWMVTQGNHEKESIPLIMDAFQSYNARWKMPFE-ESGSNSNLYYSFDVAGAHLIMLGSYA 255 (433)
Q Consensus 179 --~~~w~~~~~~~~~l~~~iP~~~v~GNHD~~~~~~~~~~~~~y~~~~~~p~~-~~~~~~~~~ys~~~g~v~fi~lds~~ 255 (433)
....+.+.+++..+...+|+..+|||||-.....-+..+.. ..|..... ..-..-...|.+++++++|++.....
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~lPQqplh~--~lfp~s~~~~~~~~vtNP~~~~i~G~~~LgtsGqn 355 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHP--CMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQN 355 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSSSSCCCCCT--TSCHHHHTSTTEEECCSSEEEEETTEEEEECSSHH
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcccccCCCCCcCH--HHhhhhhhcCccEEeCCCeEEEECCEEEEEECCCC
Confidence 12334455667777788999999999998543221122211 01110000 00001134567999999999876421
Q ss_pred -----CCCCChHHHHHHHHHhhc
Q 013955 256 -----DYDEYSDQYRWLKDDLSK 273 (433)
Q Consensus 256 -----~~~~~~~Q~~WL~~~L~~ 273 (433)
.+...+.-++.|++.|+.
T Consensus 356 idDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 356 VSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp HHHHHHHSCCCCHHHHHHHHHHB
T ss_pred HHHHHhcCCCCCHHHHHHHHHHH
Confidence 111234456788888875
No 80
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.58 E-value=0.011 Score=47.75 Aligned_cols=90 Identities=16% Similarity=0.226 Sum_probs=54.5
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
..+...|..+++...+.+++.|.|..... .......|...-..... ... .... ...+....++|++|+|++.
T Consensus 16 ~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~--~~~--~~~~--~~~~~~~~~~i~~L~p~t~ 89 (132)
T 1x5h_A 16 DVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASR--KSD--VTET--LVSGTQLSQLIEGLDRGTE 89 (132)
T ss_dssp SSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTE--EEE--EECC--BCCTTCCEEEEECCCSSCE
T ss_pred CCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCC--CCc--cEEE--EeCCCccEEEeCCCCCCCE
Confidence 34555788898887778999999998753 22233444322100000 000 0000 1223445678999999999
Q ss_pred EEEEecc--------cCCeeEEECCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.++|.. .|....|+|.+
T Consensus 90 Y~~~V~A~n~~G~g~~S~~~~~~T~~ 115 (132)
T 1x5h_A 90 YNFRVAALTINGTGPATDWLSAETFE 115 (132)
T ss_dssp EEEECEEEETTEEEEECCCEEEECCS
T ss_pred EEEEEEEEcCCccCCCCcCEEeEcCc
Confidence 9999864 25667888865
No 81
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=96.57 E-value=0.024 Score=42.24 Aligned_cols=67 Identities=18% Similarity=0.349 Sum_probs=43.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
+..|..+++...+.+++.++|..... ......|....+. ... +. ... -...+++|+||+.|+|+|
T Consensus 4 P~~P~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~~~--~~---------~~~--~~~~~~~L~~~t~Y~~~V 68 (88)
T 1k85_A 4 PTAPTNLASTAQTTSSITLSWTASTD-NVGVTGYDVYNGT-ALA--TT---------VTG--TTATISGLAADTSYTFTV 68 (88)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEEESS-SEE--EE---------ESS--SEEEECCCCSSCEEEEEE
T ss_pred cCCCCccEEEeccCCEEEEEECCCCC-CCCccEEEEEECC-EEE--ee---------cCC--CEEEeCCCCCCCEEEEEE
Confidence 45788888887789999999987643 2234555543211 111 11 111 134688999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 69 ~A 70 (88)
T 1k85_A 69 KA 70 (88)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 82
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.57 E-value=0.013 Score=45.99 Aligned_cols=81 Identities=11% Similarity=0.237 Sum_probs=51.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
..|..+++...+.+++.|.|...... ..-.|+|............ ... ...+.|++|+|++.|.+|
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~--~~~~~i~~L~p~t~Y~~~ 86 (115)
T 1x5z_A 19 GQPLNFKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRIT----------IEP--GTSYRLQGLKPNSLYYFR 86 (115)
T ss_dssp CCCEEEEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCE----------ECS--SSEEEEECCCTTCEEEEC
T ss_pred CCCccCEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEe----------cCC--CcEEEECCCCCCCeEEEE
Confidence 47888988877799999999877432 2234555544322111000 011 235678999999999999
Q ss_pred ecc--------cCCeeEEECCCC
Q 013955 119 CGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 119 v~~--------~s~~~~F~T~p~ 133 (433)
|.. .|....|+|.+.
T Consensus 87 V~A~n~~G~g~~S~~~~~~T~~~ 109 (115)
T 1x5z_A 87 LAARSPQGLGASTAEISARTMQS 109 (115)
T ss_dssp EEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCcccCCCcCEEEecCCC
Confidence 964 256677888653
No 83
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.56 E-value=0.017 Score=46.24 Aligned_cols=89 Identities=12% Similarity=0.133 Sum_probs=53.5
Q ss_pred CCCCCCCCceEEEE-ecCCCcEEEEEEcC--CCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCC
Q 013955 36 DPKPSSHPQQVHIS-LAGDSHMRVTWITD--DESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (433)
Q Consensus 36 ~~~~~~~p~qv~l~-~~~~~~~~i~W~t~--~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 108 (433)
+..++..|..+++. ..+.+++.|.|.-. ...... .|+|...... . ... ... ........+.|++
T Consensus 15 ~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~-~---~~~---~~~--~~~~~~~~~~l~~ 85 (124)
T 2dbj_A 15 EGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAG-I---SKE---LLE--EVGQNGSRARISV 85 (124)
T ss_dssp SCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETT-E---EEE---EEE--EEESTTSCEEEEC
T ss_pred CCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCC-C---ccc---eEE--EeCCCcceEEecC
Confidence 34566788888887 35689999999977 322222 3334321110 0 000 000 0011223567899
Q ss_pred CCCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 109 LEHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 109 L~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
|+|++.|.+||.. .|+...++|++.
T Consensus 86 L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 86 QVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp CCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 9999999999964 356788888765
No 84
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.55 E-value=0.016 Score=45.02 Aligned_cols=82 Identities=16% Similarity=0.135 Sum_probs=52.6
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
....|..+++...+.+++.|+|.-.... ..-.|+|....+ ... .. ...+....+.|+||+|++.|.+
T Consensus 7 ~p~~P~~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~--~~~------~~----~~~~~~ts~~l~~L~p~t~Y~~ 74 (105)
T 2cum_A 7 GLEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGG--QTQ------EI----LLPGGITSHQLLGLFPSTSYNA 74 (105)
T ss_dssp TCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTS--CEE------EE----EECSSCSEEEECSCCTTCEEEE
T ss_pred CCCCCCceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCC--ceE------EE----EECCCccEEEECCCCCCCEEEE
Confidence 3457888988877899999999866432 223567765432 111 00 0122234678999999999999
Q ss_pred Eeccc-------CCeeEEECCC
Q 013955 118 RCGRQ-------GPEFEFKTPP 132 (433)
Q Consensus 118 ~v~~~-------s~~~~F~T~p 132 (433)
+|... .....|+|..
T Consensus 75 ~V~A~~~~g~s~~~~~~~~T~~ 96 (105)
T 2cum_A 75 RLQAMWGQSLLPPVSTSFTTGG 96 (105)
T ss_dssp EEEEEBTTBCCCCEEEEEECCC
T ss_pred EEEEEeCCcccCCEEEEEEeCC
Confidence 98641 2345677754
No 85
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=96.54 E-value=0.011 Score=45.33 Aligned_cols=70 Identities=16% Similarity=0.194 Sum_probs=45.3
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC-CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEec
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS-PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~ 120 (433)
.|..+.+.-.+.++++|+|......- .-.|+|........... . ...+..-.+.|+||+|+|.|.++|.
T Consensus 4 ~P~~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~------~----~~~~~~t~~~l~gL~P~t~Y~~~V~ 73 (98)
T 3tes_A 4 APKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAIN------L----TVPGSERSYDLTGLKPGTEYTVSIY 73 (98)
T ss_dssp CCEEEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEE------E----EEETTCSEEEECSCCTTCEEEEEEE
T ss_pred CCCceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceEE------E----EcCCCcCEEEECCCCCCCEEEEEEE
Confidence 47788888677999999998775322 33577776542111100 0 0112233578999999999999986
Q ss_pred c
Q 013955 121 R 121 (433)
Q Consensus 121 ~ 121 (433)
.
T Consensus 74 A 74 (98)
T 3tes_A 74 G 74 (98)
T ss_dssp E
T ss_pred E
Confidence 4
No 86
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.53 E-value=0.016 Score=46.06 Aligned_cols=76 Identities=22% Similarity=0.238 Sum_probs=47.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.....|..+.+...+.++++|.|.-.... ..-.|+|........+..... ........++|++|+|++
T Consensus 16 ~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--------~~~~~~~~~~v~~L~p~t 87 (121)
T 1x4z_A 16 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--------AIPPSRLSVEITGLEKGI 87 (121)
T ss_dssp CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--------EECTTCCEEEEESCCTTC
T ss_pred CCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--------ccCCCcCEEEECCCCCCC
Confidence 44567888888877899999999843221 223567766542122221111 012223456789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1x4z_A 88 SYKFRVRA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
No 87
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=96.53 E-value=0.016 Score=44.15 Aligned_cols=71 Identities=14% Similarity=0.185 Sum_probs=46.6
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+.+...+.+++.|.|...... ..-.|+|....+....... ........+.|++|+|++.|.++|
T Consensus 3 ~~P~~l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 72 (98)
T 3teu_A 3 DAPTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKEL----------TVPPSSTSVTITGLTPGVEYVVSV 72 (98)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE----------EECTTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCceEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE----------EcCCCcCEEEecCCCCCCEEEEEE
Confidence 46888888877899999999977422 2346777754332111110 011223457899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~A 74 (98)
T 3teu_A 73 YA 74 (98)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 88
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.50 E-value=0.0059 Score=48.78 Aligned_cols=91 Identities=18% Similarity=0.218 Sum_probs=55.2
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC------CCCcEEEEeccCCCCC--ee-EEeeeeEEeeeeeecCeEEEEEe
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE------SSPSVVEYGTSPGGYN--CG-AEGESTSYRYLFYRSGKIHHTVI 106 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~------~~~~~v~y~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~v~l 106 (433)
+..+...|..+++.....+++.|.|.-... ...-.|+|........ .. .... ... ..+....+.|
T Consensus 11 ~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~i 84 (125)
T 1uen_A 11 EDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKK--ILT----FQGSKTHGML 84 (125)
T ss_dssp CCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEE--EEE----EESSCSEEEE
T ss_pred CCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccce--EEE----ecCCccEEEe
Confidence 345667888888887778999999987521 1123455655443221 00 0000 000 1122346788
Q ss_pred CCCCCCCEEEEEecc--------cCCeeEEECCC
Q 013955 107 GPLEHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 107 ~~L~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
++|+|+|.|.++|.. .|....|+|.+
T Consensus 85 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 118 (125)
T 1uen_A 85 PGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPE 118 (125)
T ss_dssp ESCCSSCEEEEEEEEEESSCEEEECCCEEEECCC
T ss_pred CCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCC
Confidence 999999999999864 25567788865
No 89
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=96.50 E-value=0.0064 Score=48.47 Aligned_cols=73 Identities=15% Similarity=0.284 Sum_probs=45.1
Q ss_pred cCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEeccc----
Q 013955 51 AGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ---- 122 (433)
Q Consensus 51 ~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~~---- 122 (433)
.+.++++|.|.-..... .-.|+|........+.... .++....++|.+|+|++.|.+||...
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G 88 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK----------VQGNKDHIILEHLQWTMGYEVQITAANRLG 88 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE----------EETTTCCEEECCCCTTCCEEEEEEEECTTS
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE----------cCCCcCEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 46899999997543222 2367888764332222111 11222346799999999999999641
Q ss_pred ---CCeeEEECCCC
Q 013955 123 ---GPEFEFKTPPA 133 (433)
Q Consensus 123 ---s~~~~F~T~p~ 133 (433)
.....|+|.+.
T Consensus 89 ~s~pS~~~~~T~~~ 102 (114)
T 2kbg_A 89 YSEPTVYEFSMPPK 102 (114)
T ss_dssp CEEEEEEEECCCCC
T ss_pred CcCCcCCEEEcCCC
Confidence 12467888653
No 90
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=96.46 E-value=0.024 Score=44.93 Aligned_cols=80 Identities=16% Similarity=0.277 Sum_probs=41.2
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeee--eeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYL--FYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~l~~L~p~ 112 (433)
++..|. +.-.+.++++|.|.-......+ .|+|........+........+... ....+....++|++|+|+
T Consensus 5 pP~~P~---v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~ 81 (115)
T 2ic2_A 5 PPTPPN---VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 81 (115)
T ss_dssp CCCCCE---EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSS
T ss_pred CCCcCE---eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCC
Confidence 334554 5656789999999976543333 4556554222223222211110000 001123456789999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|.|||..
T Consensus 82 t~Y~FRV~A 90 (115)
T 2ic2_A 82 HTYRFRILA 90 (115)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
No 91
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=96.45 E-value=0.011 Score=45.72 Aligned_cols=71 Identities=14% Similarity=0.183 Sum_probs=46.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC---CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE---SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~---~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
..|..+++.-.+.+++.+.|..... ...-.|+|....+..... ... .++....++|+||+|++.|.+
T Consensus 6 ~~P~~l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~------~~~----v~~~~t~~~l~~L~p~t~Y~~ 75 (101)
T 3k2m_C 6 SVPTKLEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQ------EFT----VPYSSSTATISGLSPGVDYTI 75 (101)
T ss_dssp BSSCEEEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCE------EEE----EETTCCEEEECSCCTTCEEEE
T ss_pred CCCcceEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccE------EEE----cCCCccEEEECCCCCCCEEEE
Confidence 3688898887779999999987641 122357777654321110 000 111234678999999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 76 ~V~A 79 (101)
T 3k2m_C 76 TVYA 79 (101)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9864
No 92
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.41 E-value=0.015 Score=45.99 Aligned_cols=81 Identities=11% Similarity=0.055 Sum_probs=50.8
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+++...+.+++.|.|.-.... ..-.|+|....+... .. ...+....+.|++|+|+|.|.++
T Consensus 8 p~~P~~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~--------~~----~v~~~~t~~~l~~L~P~t~Y~~~ 75 (115)
T 2cuh_A 8 PDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL--------QA----ETPGSAVDYPLHDLVLHTNYTAT 75 (115)
T ss_dssp CSSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCE--------EE----EEETTCSEEEECSCCSSSEEEEE
T ss_pred CCCCcceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCCcE--------EE----EECCCccEEEEeCCCCCCEEEEE
Confidence 346888888777789999999865322 223567765432110 00 01122345789999999999999
Q ss_pred eccc-------CCeeEEECCC
Q 013955 119 CGRQ-------GPEFEFKTPP 132 (433)
Q Consensus 119 v~~~-------s~~~~F~T~p 132 (433)
|... .....|+|.+
T Consensus 76 V~A~~~~~~s~~~~~~~~T~~ 96 (115)
T 2cuh_A 76 VRGLRGPNLTSPASITFTTGL 96 (115)
T ss_dssp EEEEETTEECCCEEEEEESCC
T ss_pred EEEEeCCCcCCCEEEEEEeCC
Confidence 8641 2345677754
No 93
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=96.40 E-value=0.0025 Score=60.75 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=43.1
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh--hCCCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~--~~iP~~~v~GNHD~~ 208 (433)
.++.++||+|.... ..++++.+.....+-+|++||+++.+.... + ....+..+. ..-.++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vflGD~VDRG~~s~--e-vl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL--E-TICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHH--H-HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCCCCcceEEeCCCcCCCCCChH--H-HHHHHHHhhhhcCCceEEecCCchHh
Confidence 35899999985421 234445554556788999999998765422 1 122222221 123588999999974
No 94
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.39 E-value=0.016 Score=45.53 Aligned_cols=84 Identities=23% Similarity=0.282 Sum_probs=53.7
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+++.-.+.+++.|+|.-... ...-.|+|....+....... ..+....+.|++|+|+|.|.
T Consensus 6 ~p~~pP~~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~-----------v~~~~t~~~l~~L~p~T~Y~ 74 (108)
T 2ee3_A 6 SGLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTE-----------APGNATSAMLGPLSSSTTYT 74 (108)
T ss_dssp CCCCCSSCEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEE-----------EETTCCEEEECSCCSSCEEE
T ss_pred cCCCCCceEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEE-----------cCCCcCEEEcCCCCCCCEEE
Confidence 3556899999987789999999976532 23346778765432111000 11222357899999999999
Q ss_pred EEeccc-----C--CeeEEECCC
Q 013955 117 YRCGRQ-----G--PEFEFKTPP 132 (433)
Q Consensus 117 Y~v~~~-----s--~~~~F~T~p 132 (433)
++|..- + ....|+|.+
T Consensus 75 v~V~A~~~~g~s~p~~~~~~T~~ 97 (108)
T 2ee3_A 75 VRVTCLYPGGGSSTLTGRVTTKK 97 (108)
T ss_dssp EEEEEECTTSCEEEEEEEEECCC
T ss_pred EEEEEEeCCCcCCCccCEEEeCC
Confidence 998641 1 134688853
No 95
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=96.38 E-value=0.019 Score=45.96 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=47.5
Q ss_pred CceEEEEecCCCcEEEEEEcCCCCCC-----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 43 PQQVHISLAGDSHMRVTWITDDESSP-----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 43 p~qv~l~~~~~~~~~i~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
|..+.+...+.+ +.|.|.-...... -.|+|............ ... ........++|++|+|+|.|.+
T Consensus 11 P~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~------~~~-~~~~~~~~~~i~~L~p~t~Y~~ 82 (122)
T 2e3v_A 11 PSIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW------YDA-KEASMEGIVTIVGLKPETTYAV 82 (122)
T ss_dssp CEEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEE------EEH-HHHHTTTEEEECSCCTTCEEEE
T ss_pred CCccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccce------eee-eecCccceEEeCCCCCCCEEEE
Confidence 888887766666 9999997643221 24555544321110100 000 0011123568899999999999
Q ss_pred Eecc--------cCCeeEEECCC
Q 013955 118 RCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 118 ~v~~--------~s~~~~F~T~p 132 (433)
||.. .|....|+|.+
T Consensus 83 rV~A~n~~G~g~~S~~~~~~t~~ 105 (122)
T 2e3v_A 83 RLAALNGKGLGEISAASEFKTQP 105 (122)
T ss_dssp EEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEeCCccCCCcccccccccC
Confidence 9964 24556676655
No 96
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.37 E-value=0.016 Score=45.79 Aligned_cols=82 Identities=15% Similarity=0.169 Sum_probs=50.4
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+...+.+++.|.|......... .|+|........+.... .... ..+.|++|+|++.|
T Consensus 18 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~--~~~~v~~L~p~t~Y 86 (118)
T 1x3d_A 18 PDIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY---------MGSQ--KQFKITKLSPAMGC 86 (118)
T ss_dssp CCCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE---------EESC--SEEEEESCCTTCEE
T ss_pred CcCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee---------ccCC--cEEEeCCCCCCCEE
Confidence 346777777777789999999887533333 34454433211111110 0111 34578999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.|||.. .|....++|.+
T Consensus 87 ~frV~A~n~~G~s~~S~~~~~~T~~ 111 (118)
T 1x3d_A 87 KFRLSARNDYGTSGFSEEVLYYTSG 111 (118)
T ss_dssp EEECCEEESSCBCCCCCCEEEECSC
T ss_pred EEEEEEEECCCCCCCccCEEEEcCC
Confidence 999964 24566677754
No 97
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=96.34 E-value=0.0071 Score=46.97 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=47.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+++.-.+.++++|.|..... ...-.|+|.......... . . ..++....++|+||+|++.|
T Consensus 8 ~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~-~-----~----~v~~~~ts~~l~~L~p~t~Y 77 (103)
T 3t04_D 8 SSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ-E-----F----TVPGYYSTATISGLKPGVDY 77 (103)
T ss_dssp CCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE-E-----E----EEETTCCEEEECSCCTTCCE
T ss_pred CCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE-E-----E----EcCCCcCEEEeCCCCCCCEE
Confidence 45788888887779999999987652 122367777653211110 0 0 01122446789999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.++|..
T Consensus 78 ~~~V~A 83 (103)
T 3t04_D 78 TITVYA 83 (103)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999854
No 98
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=96.34 E-value=0.021 Score=45.78 Aligned_cols=74 Identities=15% Similarity=0.243 Sum_probs=47.9
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+.+...+.+++.|.|.-.... ..-.|+|....+..... ... .++....+.|+||+|+|.|.
T Consensus 27 tp~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~------~~~----v~~~~t~~~l~gL~P~t~Y~ 96 (121)
T 2ocf_D 27 SVSDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQ------EFT----VPGSKSTATISGLKPGVDYT 96 (121)
T ss_dssp --CCSCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBE------EEE----EETTCCEEEECCCCTTCEEE
T ss_pred CCCCCCCccEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccE------EEE----eCCCcCEEEeCCCCCCCEEE
Confidence 45578999999988899999999876422 23456676654321100 000 11223467899999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 97 ~~V~A 101 (121)
T 2ocf_D 97 ITVYA 101 (121)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 99
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.33 E-value=0.018 Score=46.46 Aligned_cols=84 Identities=21% Similarity=0.310 Sum_probs=52.1
Q ss_pred CCCCCCc-eEEEEecCCCcEEEEEEcCCCCC-Cc-EEEEeccCCC----------CCeeEEeeeeEEeeeeeecCeEEEE
Q 013955 38 KPSSHPQ-QVHISLAGDSHMRVTWITDDESS-PS-VVEYGTSPGG----------YNCGAEGESTSYRYLFYRSGKIHHT 104 (433)
Q Consensus 38 ~~~~~p~-qv~l~~~~~~~~~i~W~t~~~~~-~~-~v~y~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v 104 (433)
..+..|. .+++...+.+++++.|....... .. .++|...... ..+..... ... ...
T Consensus 14 ~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~---------~~~--~~~ 82 (127)
T 2dmk_A 14 TAPNPPSIREELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN---------IKQ--NHY 82 (127)
T ss_dssp SSCCCCEEEEEEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE---------ECS--SEE
T ss_pred CCCcCCCCCCEEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec---------ccC--CeE
Confidence 3455788 78888778999999999885422 22 5677651110 01111100 111 235
Q ss_pred EeCCCCCCCEEEEEecc-------cCCeeEEECCC
Q 013955 105 VIGPLEHDTVYFYRCGR-------QGPEFEFKTPP 132 (433)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~-------~s~~~~F~T~p 132 (433)
+|+||+|++.|.|||.. .+....++|++
T Consensus 83 ~v~gL~p~t~Y~frV~A~N~~G~~~S~~v~~~T~~ 117 (127)
T 2dmk_A 83 TVHGLQSGTRYIFIVKAINQAGSRNSEPTRLKTNS 117 (127)
T ss_dssp EEESCCSSCEEEEEEEEEESSCEEECCCEEEECCS
T ss_pred EECCCCCCCEEEEEEEEEeCCCCCCCcCeEeEeCC
Confidence 78899999999999964 24556677765
No 100
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=96.30 E-value=0.022 Score=49.91 Aligned_cols=84 Identities=17% Similarity=0.147 Sum_probs=53.1
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC--------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE--------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~--------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
.+...|..+.+...+.++++|+|..... ...-.|+|............ .......+.|++|
T Consensus 3 ~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L 71 (211)
T 3p4l_A 3 LPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGL 71 (211)
T ss_dssp CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEE-----------EEESSSEEEECSC
T ss_pred CCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEE-----------eCCCceEEEecCc
Confidence 3556899999887789999999997421 12345667654322111110 0112335678999
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
+|++.|.++|.. .+....++|.+
T Consensus 72 ~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~ 102 (211)
T 3p4l_A 72 KPNTLYEFSVMVTKGRRSSTWSMTAHGTTFE 102 (211)
T ss_dssp CTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCCEEEEEEEEEcCCCCCccceeEeeeccc
Confidence 999999999864 24467788754
No 101
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.30 E-value=0.015 Score=45.32 Aligned_cols=73 Identities=18% Similarity=0.205 Sum_probs=45.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC-C----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESS-P----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+...+.++++|.|....... . -.|+|...... .+..... ........+|++|+|++
T Consensus 7 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~-~w~~~~~---------~~~~~~~~~v~~L~p~t 76 (110)
T 2yuw_A 7 GTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTE-DWIVANK---------DLIDKTKFTITGLPTDA 76 (110)
T ss_dssp CSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCS-SEEECCS---------SCCCSSEEEECSCCTTC
T ss_pred CCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCc-cceEecc---------ccCccCEEEECCCCCCC
Confidence 34578888888777899999999764321 1 24555544321 1111110 11123346789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 77 ~Y~frV~A 84 (110)
T 2yuw_A 77 KIFVRVKA 84 (110)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999965
No 102
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.28 E-value=0.0065 Score=48.12 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=46.6
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
+.+...|....+.-.+.++++|.|..... ...-.|+|....... +..... ........+++||+|
T Consensus 8 ~~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~-w~~~~~---------~~~~~~~~~v~~L~p 77 (112)
T 1bpv_A 8 SSPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGR-WLKANF---------SNILENEFTVSGLTE 77 (112)
T ss_dssp -CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCC-CEECCC---------SCCCSSEEEECSCCS
T ss_pred CCCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCc-eEEeec---------ccCccCEEEECCCCC
Confidence 34556777777776779999999985421 233567887654322 211110 011122357899999
Q ss_pred CCEEEEEecc
Q 013955 112 DTVYFYRCGR 121 (433)
Q Consensus 112 ~t~Y~Y~v~~ 121 (433)
++.|.|||..
T Consensus 78 ~t~Y~frV~A 87 (112)
T 1bpv_A 78 DAAYEFRVIA 87 (112)
T ss_dssp SCCEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999965
No 103
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=96.24 E-value=0.024 Score=44.99 Aligned_cols=72 Identities=18% Similarity=0.329 Sum_probs=47.7
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
+..|..+.+.-.+.+++.|.|...... ..-.|+|....+..... ... .++....++|+||+|+|.|.++
T Consensus 4 P~~P~~L~v~~~t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~------~~~----v~~~~ts~~l~gL~P~T~Y~v~ 73 (114)
T 3qwq_B 4 SDVPRDLEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQ------EFT----VPGPVHTATISGLKPGVDYTIT 73 (114)
T ss_dssp -CCCEEEEEEEEETTEEEEEEECCSCCCSEEEEEEEESSCSSCCE------EEE----EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCEEEEEEcCCcCcccEEEEEEEECCCCCccE------EEE----eCCCcCEEEeCCCCCCCEEEEE
Confidence 457889988877899999999876422 33467787654321100 000 1122345789999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 74 V~A 76 (114)
T 3qwq_B 74 VYA 76 (114)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 104
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.22 E-value=0.011 Score=46.35 Aligned_cols=74 Identities=16% Similarity=0.230 Sum_probs=46.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
.....|..+.+...+.++++|.|.-.... ..-.|+|...... .+..... .......++|++|+|+
T Consensus 7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~-~w~~~~~---------~~~~~~~~~v~~L~p~ 76 (111)
T 1x5y_A 7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSE-EWVPANK---------EPVERCGFTVKDLPTG 76 (111)
T ss_dssp SCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCC-CCEESSS---------SCBSSSEEEEECCCTT
T ss_pred CCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCC-ceEEccc---------cCCcccEEEECCCCCC
Confidence 34457888888877899999999976432 2234666554322 1111110 1112334678899999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|.|||..
T Consensus 77 t~Y~frV~A 85 (111)
T 1x5y_A 77 ARILFRVVG 85 (111)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999975
No 105
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.20 E-value=0.02 Score=45.46 Aligned_cols=81 Identities=17% Similarity=0.242 Sum_probs=47.5
Q ss_pred CCCceEEEE-ecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 41 SHPQQVHIS-LAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 41 ~~p~qv~l~-~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
..|..+.+. -.+.+++.|.|...... ..-.|+|........+.... .+.....+|++|+|++.
T Consensus 19 ~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~v~~L~p~t~ 87 (120)
T 2crm_A 19 GIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-----------SGATREHLCDRLNPGCF 87 (120)
T ss_dssp CCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-----------CSSCSEEEECSCCTTSC
T ss_pred CCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE-----------eccccEEEECCCCCCCE
Confidence 356565555 44588999999865432 22356666543211111110 11123467899999999
Q ss_pred EEEEecc--------cCCeeEEECCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.|||.. .|+...++|.+
T Consensus 88 Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 2crm_A 88 YRLRVYCISDGGQSAVSESLLVQTPA 113 (120)
T ss_dssp EEEEEEEEETTEECCCCCCCCCCCCC
T ss_pred EEEEEEEEcCCccCCCcccEEEEcCC
Confidence 9999964 24455666643
No 106
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.12 E-value=0.016 Score=45.17 Aligned_cols=81 Identities=12% Similarity=0.107 Sum_probs=48.2
Q ss_pred CCCCceEEEE-ecCCCcEEEEEEcCCC-C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 40 SSHPQQVHIS-LAGDSHMRVTWITDDE-S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 40 ~~~p~qv~l~-~~~~~~~~i~W~t~~~-~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
...|..+.+. ..+.+++.|.|..... . ..-.|+|............ . +....++|++|+|++
T Consensus 9 P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t 76 (110)
T 2crz_A 9 PGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q-----------GSEVECTVSSLLPGK 76 (110)
T ss_dssp CCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E-----------ESCSEEEEESCCTTC
T ss_pred CCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e-----------CCcEEEEECCcCCCC
Confidence 3467777663 3457899999965422 1 2245667654322111111 0 112345788999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.|||.. .|....++|.+
T Consensus 77 ~Y~frV~A~n~~G~g~~S~~~~~~T~~ 103 (110)
T 2crz_A 77 TYSFRLRAANKMGFGPFSEKCDITTAP 103 (110)
T ss_dssp EEEECCEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCCccccccCC
Confidence 99999964 24566777754
No 107
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.09 E-value=0.013 Score=48.27 Aligned_cols=76 Identities=12% Similarity=0.051 Sum_probs=45.7
Q ss_pred EEEecCCCcEEEEEEcCCCC-C------------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 47 HISLAGDSHMRVTWITDDES-S------------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 47 ~l~~~~~~~~~i~W~t~~~~-~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+...++++++++|.-.... . .-.|+|..+......... ..+-...++|+||+|+|
T Consensus 25 ~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~-----------~~g~~ts~~v~~L~P~T 93 (137)
T 1wk0_A 25 VASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV-----------YVGEETNITLNDLKPAM 93 (137)
T ss_dssp EEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE-----------EEESCSEEEECSCCTTC
T ss_pred EEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEE-----------EecCccEEEEcCCCCCC
Confidence 35666799999999876433 1 112334333221111100 01122457899999999
Q ss_pred EEEEEecc--------cCCeeEEECCCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.|.+||.. .|....|+|++.
T Consensus 94 ~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 94 DYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 99999964 256778999764
No 108
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.07 E-value=0.016 Score=45.84 Aligned_cols=78 Identities=14% Similarity=0.163 Sum_probs=48.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCe--eEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNC--GAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
...|.++++.-.+.++++|.|..... ...-.|+|....+.... ...+..... ..++....++|+||+|||.|.
T Consensus 9 pp~p~~L~v~~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~----~v~~~~t~~~l~gL~PgT~Y~ 84 (112)
T 2cui_A 9 RPRLSQLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQREL----MVPGTRHSAVLRDLRSGTLYS 84 (112)
T ss_dssp CCCCCCCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEE----EEETTCCEEEECSCCTTCEEE
T ss_pred CCCCCceEEEeecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEE----EcCCCcCEEEeCCCCCCCEEE
Confidence 34678888888889999999986532 23456788765431000 000000000 012223468899999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 85 ~~V~A 89 (112)
T 2cui_A 85 LTLYG 89 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
No 109
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=96.03 E-value=0.039 Score=47.15 Aligned_cols=82 Identities=17% Similarity=0.125 Sum_probs=50.4
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+.+...+.+++.|.|.-.... ..-.|+|....+....... ..+....+.|+||+|++.|.++
T Consensus 95 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~L~p~t~Y~~~ 163 (186)
T 1qr4_A 95 VGSPKGISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----------VDGSKTRTKLVKLVPGVDYNVN 163 (186)
T ss_dssp CCCCSCEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----------EETTCCEEEECSCCSSCEEEEE
T ss_pred CCCCCccEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEEE-----------cCCCcCEEEEcCCCCCCEEEEE
Confidence 457888888766789999999865322 2345667665431111100 1122345789999999999999
Q ss_pred eccc-----C--CeeEEECCC
Q 013955 119 CGRQ-----G--PEFEFKTPP 132 (433)
Q Consensus 119 v~~~-----s--~~~~F~T~p 132 (433)
|... | ....|+|.|
T Consensus 164 V~A~~~~g~s~p~~~~~~T~p 184 (186)
T 1qr4_A 164 IISVKGFEESEPISGILKTAL 184 (186)
T ss_dssp EEEEETTEECCCEEEEEEC--
T ss_pred EEEEcCCCcCcCEEEEEEecC
Confidence 9641 2 245677765
No 110
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=96.02 E-value=0.016 Score=44.32 Aligned_cols=72 Identities=19% Similarity=0.288 Sum_probs=46.6
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+++.-.+.+++.|.|..... ...-.|+|....+..... . . ..++....++|+||+|++.|.++
T Consensus 5 ~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~-~-----~----~v~~~~t~~~l~~L~p~t~Y~v~ 74 (97)
T 3qht_C 5 SSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQ-E-----F----TVPGSSSTATISGLSPGVDYTIT 74 (97)
T ss_dssp CCSSSSCEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCE-E-----E----EEETTCCEEEECSCCTTCEEEEE
T ss_pred CCCCCceEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccE-E-----E----EeCCCcCEEEeCCCCCCCEEEEE
Confidence 34688888887779999999986532 223457777654321110 0 0 01222346789999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 75 V~A 77 (97)
T 3qht_C 75 VYA 77 (97)
T ss_dssp EEE
T ss_pred EEE
Confidence 864
No 111
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.02 E-value=0.037 Score=43.49 Aligned_cols=83 Identities=13% Similarity=0.097 Sum_probs=52.2
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
+...|..+.+.- ..+++++.|.-+... ..-.|+|.... ..+...... ......+..|.+|+|++.
T Consensus 7 p~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~--~~W~~~~~~--------~~~~~t~~~v~~L~pg~~ 75 (108)
T 1v5j_A 7 GLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGS--QGWEVLDPA--------VAGTETELLVPGLIKDVL 75 (108)
T ss_dssp CCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETT--CCCEEEEEE--------ECSSCCEEECCCCCTTSC
T ss_pred CCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCC--CCcEEeeee--------cCCCcCEEEeCCCCCCCE
Confidence 346788888874 467899999987532 23467887632 222221110 112234567999999999
Q ss_pred EEEEecc--------cCCeeEEECCC
Q 013955 115 YFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 115 Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.|||.. .|+...++|..
T Consensus 76 Y~FRV~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 76 YEFRLVAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp EECCBEEEETTEEEEECSCCCCCCSS
T ss_pred EEEEEEEEcCCCCcCCCCCEEEEeCC
Confidence 9999964 24556666654
No 112
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.01 E-value=0.0094 Score=56.74 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=43.4
Q ss_pred CCCeEEEEEecCCCCCC-hHHHHHHhhcCCC-ceEEccccccccccchhhHHHhhhhhhhhhh--CCCceeccCCCcCC
Q 013955 134 QFPITFAVAGDLGQTGW-TKSTLDHIGQCKY-DVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (433)
Q Consensus 134 ~~~~~f~~~gD~~~~~~-~~~~l~~i~~~~p-d~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~iP~~~v~GNHD~~ 208 (433)
....+++++||+|.... ..++++.+..... +.+|++||+++.+....+ . ...+..+.. .-.++.+.||||..
T Consensus 61 ~~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~e--v-l~lL~~lk~~~p~~v~llrGNHE~~ 136 (335)
T 3icf_A 61 TPDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCE--V-ALLFYCLKILHPNNFFLNRGNHESD 136 (335)
T ss_dssp STTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSSTTHHH--H-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCcChHH--H-HHHHHHHhhhCCCcEEEecCchhhh
Confidence 46789999999986521 2234444433333 469999999987654221 1 122222221 13488899999963
No 113
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=95.97 E-value=0.0062 Score=57.05 Aligned_cols=68 Identities=18% Similarity=0.157 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh--hCCCceeccCCCcCC
Q 013955 138 TFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA--SARPWMVTQGNHEKE 208 (433)
Q Consensus 138 ~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~--~~iP~~~v~GNHD~~ 208 (433)
+++++||+|.... ..++++.+.....+-+|++||+++.+....+ . ...+..+. ..-.++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDrG~~s~e--v-l~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE--T-ICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCSTTSSCEEECSCCSSSSSCHHH--H-HHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCCCCccEEeCCcccCCCCCcHH--H-HHHHHHHHhhCCCcEEEEecCchhh
Confidence 5899999986522 2334444445566789999999987654221 1 12222221 123588999999973
No 114
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=95.92 E-value=0.0074 Score=56.96 Aligned_cols=71 Identities=14% Similarity=0.142 Sum_probs=41.9
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcC-CCceEEccccccccccchhhHHHhhhhhhhhhh--CCCceeccCCCcCC
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQC-KYDVHLLPGDLSYADYMQHRWDTFGELVQPLAS--ARPWMVTQGNHEKE 208 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~-~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~--~iP~~~v~GNHD~~ 208 (433)
...+++++||+|.... ..++++.+... ..+.++++||+++.+.... +. ...+..+.. .-.++.+.||||..
T Consensus 58 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~~s~--ev-l~lL~~lk~~~p~~v~~lrGNHE~~ 132 (315)
T 3h63_A 58 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EV-ILTLFGFKLLYPDHFHLLRGNHETD 132 (315)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HH-HHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCcChH--HH-HHHHHHhhhhcCCcEEEEecCcccc
Confidence 3578999999985521 22333333322 3356999999998765421 11 122222211 23488899999974
No 115
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.85 E-value=0.0082 Score=60.40 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=42.7
Q ss_pred CCeEEEEEecCCCCCC-hHHHHHHhhcCC-CceEEccccccccccchhhHHHhhhhhhhh--hhCCCceeccCCCcCC
Q 013955 135 FPITFAVAGDLGQTGW-TKSTLDHIGQCK-YDVHLLPGDLSYADYMQHRWDTFGELVQPL--ASARPWMVTQGNHEKE 208 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~-~~~~l~~i~~~~-pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l--~~~iP~~~v~GNHD~~ 208 (433)
...+++++||+|.... ...+++.+.... .+.+|++||+++.+.... +.+ ..+..+ ...-.++.+.||||..
T Consensus 211 ~~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~~s~--e~~-~~l~~l~~~~~~~~~~lrGNHE~~ 285 (477)
T 1wao_1 211 ETEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSV--EVI-LTLFGFKLLYPDHFHLLRGNHETD 285 (477)
T ss_dssp SSCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSSTTHH--HHH-HHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CCcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCcchH--HHH-HHHHHHHhhCCCceEeecCCccHH
Confidence 4578999999985421 223444443333 356999999998765321 111 122222 1235688999999963
No 116
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=95.83 E-value=0.027 Score=49.30 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=50.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCC-----CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDD-----ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~-----~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
+...|..+.+...+.+++.|.|.... ....-.|+|............. ..........|++|+|++
T Consensus 115 ~~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~p~t 185 (214)
T 2ibg_A 115 PMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKAT---------IEGAHARSFKIAPLETAT 185 (214)
T ss_dssp CCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEE---------EECTTCCEEEECSCCTTC
T ss_pred CCCCCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEee---------ccCCcceEEEeCCCCCCC
Confidence 33457777666556889999999873 1123456676554311111110 011112346789999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.|||.. .|....++|..
T Consensus 186 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 186 MYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCcceEeeEecC
Confidence 99999964 24566777753
No 117
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.78 E-value=0.061 Score=41.33 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=42.7
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|. +.|...+.+++.|.|....... .-.|+|........... .........+|++|+|++.|.+
T Consensus 10 ~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 10 RPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTI-----------DFGKDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp CCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEE-----------EEETTCCEEEEECCCTTCEEEE
T ss_pred CCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEE-----------EeCCCccEEEeCCCCCCCEEEE
Confidence 455 6677667899999999874322 23566765543211111 0112233567899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
||..
T Consensus 78 ~V~A 81 (107)
T 2dn7_A 78 RLAA 81 (107)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 118
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.77 E-value=0.11 Score=41.37 Aligned_cols=84 Identities=13% Similarity=0.167 Sum_probs=48.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCC-CCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGG-YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+...+.++++|.|.-...... -.|+|...... ..+...... ..... . .+.+|+|++
T Consensus 16 ~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~~~-------~~~~~-~--~i~~L~p~t 85 (127)
T 1uey_A 16 VPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV-------SGTQT-T--AQLNLSPYV 85 (127)
T ss_dssp SCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEE-------ESSCC-E--EEECCCTTC
T ss_pred CCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEeee-------CCCce-E--EEecCCCCC
Confidence 345888898887779999999996533232 34555543221 112111110 01111 1 356999999
Q ss_pred EEEEEecc--------cCCe-eEEECCC
Q 013955 114 VYFYRCGR--------QGPE-FEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~-~~F~T~p 132 (433)
.|.|||.. .|.. ..|+|.+
T Consensus 86 ~Y~frV~A~n~~G~s~~S~~~~~~~T~~ 113 (127)
T 1uey_A 86 NYSFRVMAVNSIGKSLPSEASEQYLTKA 113 (127)
T ss_dssp EECCEEEEEESSCBCCCCSCCCCEECCC
T ss_pred EEEEEEEEEeCCccCCccccccceEcCC
Confidence 99999964 1333 4677754
No 119
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=95.77 E-value=0.0084 Score=57.43 Aligned_cols=69 Identities=19% Similarity=0.212 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~ 208 (433)
.+++++||+|.... ..++++.......+-+|++||+++.+.... +. ...+..+... -.++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~~~~~~~vfLGD~VDRG~~s~--Ev-l~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSI--EC-VLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSTTHH--HH-HHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCCCCCcEEEECCCccCCCcChH--HH-HHHHHHhhhhcCCcEEEEeCchhhh
Confidence 35899999986531 233444444566788999999998765421 11 1222222211 3488899999974
No 120
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=95.75 E-value=0.043 Score=42.67 Aligned_cols=71 Identities=13% Similarity=0.178 Sum_probs=42.7
Q ss_pred CCCCceEEEEec-CCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLA-GDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~-~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
+..|..+.++.. +.+++.++|.... ....+.-|+...........+.. .... ....++|++|++|+|+
T Consensus 5 P~aP~~l~a~~~~~~~~v~LsW~~~~-~~~~Y~VyR~~~~~~~~~~i~~~--------~~~t--sy~d~~l~~g~~Y~Y~ 73 (103)
T 3mpc_A 5 PAFPTGLSAVLDSSGNTANLTWNAAP-GANSYNVKRSTKSGGPYTTIATN--------ITST--NYTDTGVATGTKYYYV 73 (103)
T ss_dssp CCCCEEEEEEECTTSCCEEEEEECCT-TCSEEEEEEESSTTCCCEEEEEE--------ECSS--EEEETTCCTTCCCEEE
T ss_pred CCCCceeEEEEeCCCCEEEEEEECCC-CCCEEEEEEecCCCCCcEEEeec--------CCCC--EEEECCCCCCCEEEEE
Confidence 457888888765 3679999999864 34455556554322111111110 0111 1234799999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 74 V~A 76 (103)
T 3mpc_A 74 VSA 76 (103)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
No 121
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=95.74 E-value=0.016 Score=46.58 Aligned_cols=81 Identities=15% Similarity=0.198 Sum_probs=45.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----Cc-EEEEeccC---CCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PS-VVEYGTSP---GGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~-~v~y~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
..|....+.-.+.+++++.|.-+.... .. ...|-... ....+.... ... ...++|++|+|+
T Consensus 17 ~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~---------~~~--~t~~~v~gL~p~ 85 (120)
T 1wfu_A 17 SKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIY---------TGY--ATRHVVEGLEPR 85 (120)
T ss_dssp CCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEE---------EES--CSEEEEESCCTT
T ss_pred CCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEe---------cCC--ccEEEECCCCCC
Confidence 344444344345899999998764322 12 34443331 111111110 111 123678999999
Q ss_pred CEEEEEecc--------cCCeeEEECCC
Q 013955 113 TVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 113 t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|.|.|||.. .|+...++|.+
T Consensus 86 t~Y~frV~A~n~~G~s~~S~~~~~~T~~ 113 (120)
T 1wfu_A 86 TLYKFRLKVTSPSGEYEYSPVVSVATTR 113 (120)
T ss_dssp CEEEEEEEEECSSSCEEECCCEEEECCC
T ss_pred CEEEEEEEEECCCCCCCCCccEeeEcCC
Confidence 999999974 25667788865
No 122
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.73 E-value=0.069 Score=47.60 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=53.7
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+.+...+.++++|+|.-... ...-.|+|............- ......+.|++|+|++.|.
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~ 72 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLL-----------DSKVPSVELTNLYPYCDYE 72 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEE-----------EESSSEEEECSCCTTCEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECCCCccceEEEEEEECCCCccceEEE-----------cCCccEEEECCCCCCCEEE
Confidence 4567899999988789999999987632 223456776554321111100 0112346789999999999
Q ss_pred EEecc--------cCCeeEEECCC
Q 013955 117 YRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 117 Y~v~~--------~s~~~~F~T~p 132 (433)
++|.. .+....++|..
T Consensus 73 ~~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 73 MKVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp EEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEeCCCcCCCCCeEEEEcCC
Confidence 99864 24456777753
No 123
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=95.71 E-value=0.041 Score=43.63 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=46.5
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+..|..+.+...+.+++.|.|...... ..-.|+|............ . ......+.|++|+|++
T Consensus 17 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~-~----------~~~~~~~~v~~L~p~t 85 (120)
T 2yux_A 17 RPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVI-E----------HYHRTSATITELVIGN 85 (120)
T ss_dssp CCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEE-S----------SCCSSCCEECCCCSSE
T ss_pred CCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEee-e----------cCCcCEEEECCCCCCC
Confidence 4457888888767789999999875422 2245777765432221111 0 1112335789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 86 ~Y~frV~A 93 (120)
T 2yux_A 86 EYYFRVFS 93 (120)
T ss_dssp EEEEEECC
T ss_pred EEEEEEEE
Confidence 99999975
No 124
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=95.70 E-value=0.097 Score=47.83 Aligned_cols=86 Identities=14% Similarity=0.173 Sum_probs=55.4
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC-CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDD-ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+.+...+.++++|.|.-.. ....-.|+|.......... .. ........+.|++|+|++.|.
T Consensus 13 ~~p~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~------~~----~~~~~~~~~~i~~L~p~t~Y~ 82 (283)
T 1tdq_A 13 PVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKT------TF----RLQPPLSQYSVQALRPGSRYE 82 (283)
T ss_dssp CSSCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCE------EE----EECTTCSEEEECSCCTTCEEE
T ss_pred cCCCCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcE------EE----EeCCCCCEEEecCCCCCCEEE
Confidence 455689999888778999999999875 2233467776543221110 00 012234456889999999999
Q ss_pred EEeccc-------CCeeEEECCCC
Q 013955 117 YRCGRQ-------GPEFEFKTPPA 133 (433)
Q Consensus 117 Y~v~~~-------s~~~~F~T~p~ 133 (433)
++|... .....|+|+|.
T Consensus 83 ~~V~a~~~~g~s~~~~~~~~t~p~ 106 (283)
T 1tdq_A 83 VSISAVRGTNESDASSTQFTTEID 106 (283)
T ss_dssp EEEEEEETTEECCCEEEEEECCCC
T ss_pred EEEEEECCCCCCCCeeEEEECCCC
Confidence 999641 23456777653
No 125
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.69 E-value=0.015 Score=43.95 Aligned_cols=71 Identities=13% Similarity=0.225 Sum_probs=45.3
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
..|..+++...+.+++.|+|.-... ...-.|+|....+. ...... ...+....+.|+||+||+.|.++|
T Consensus 3 ~~P~~l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~-------~~~~~~---~~~~~~~~~~l~~L~p~t~Y~~~V 72 (94)
T 1j8k_A 3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDG-------IHELFP---APDGEEDTAELQGLRPGSEYTVSV 72 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTE-------EEEECC---CCCSSCCEEEECSCCCCSEEEEEE
T ss_pred CCCCccEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCC-------CceEEe---cCCCCccEEEeCCCCCCCEEEEEE
Confidence 3577788887778999999966532 12346677654321 000000 112234567899999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 73 ~A 74 (94)
T 1j8k_A 73 VA 74 (94)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 126
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.64 E-value=0.024 Score=44.50 Aligned_cols=72 Identities=10% Similarity=0.201 Sum_probs=43.6
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+...+.++++|.|....... .-.|+|........+.... .......+.|++|+|++.|
T Consensus 16 P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y 85 (117)
T 1uem_A 16 PGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA----------NHVKTTLYTVRGLRPNTIY 85 (117)
T ss_dssp CBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE----------EEECSSEEEECSCCTTCEE
T ss_pred ccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc----------cccCcCEEEECCCCCCCEE
Confidence 3467788888777899999998664222 2345565432111111100 0011224688999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|||..
T Consensus 86 ~frV~A 91 (117)
T 1uem_A 86 LFMVRA 91 (117)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999974
No 127
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.54 E-value=0.07 Score=41.58 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=49.2
Q ss_pred CCCCCCCCCCceEEEEecC--CCcEEEEEEcCCC---C----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEE
Q 013955 34 PWDPKPSSHPQQVHISLAG--DSHMRVTWITDDE---S----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (433)
Q Consensus 34 ~~~~~~~~~p~qv~l~~~~--~~~~~i~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 104 (433)
|++......|..+++.... .+++.|.|..+.. . -.-.|+|............. .. ...+
T Consensus 2 P~~ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~----------~~--~~~~ 69 (109)
T 1uc6_A 2 PLGSVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL----------SN--GTAH 69 (109)
T ss_dssp CTTSCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE----------SS--CSEE
T ss_pred CcCEEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEec----------cc--CCEE
Confidence 3444556689999888643 5899999998753 1 23467777765321111110 01 1346
Q ss_pred EeCCCCCCCEEEEEecc
Q 013955 105 VIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~ 121 (433)
.|.+|+||+.|.+||..
T Consensus 70 ~l~~L~p~t~Y~~~VRa 86 (109)
T 1uc6_A 70 TITDAYAGKEYIIQVAA 86 (109)
T ss_dssp EETTCCSSSCEEEEEEC
T ss_pred EEeCCCCCCEEEEEEEE
Confidence 78999999999999965
No 128
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.53 E-value=0.038 Score=43.47 Aligned_cols=71 Identities=21% Similarity=0.320 Sum_probs=43.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
..|..+++...+.+++.|.|....... .-.|+|...... ..... . ........+.|++|+|++.|.+
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~-~~~~~------~---~~~~~~~~~~i~~L~p~t~Y~~ 88 (118)
T 2yrz_A 19 DTPTRLVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGG-ELHRL------N---IPNPAQTSVVVEDLLPNHSYVF 88 (118)
T ss_dssp CCCCCCEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSC-CEEEE------E---ESCTTCCEEEEESCCTTCEEEE
T ss_pred CCCCceEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCC-ceEEE------E---cCCCCcCEEEeCCCCCCCEEEE
Confidence 467778777666899999998775431 123455543321 11100 0 1112234577899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
||..
T Consensus 89 ~V~A 92 (118)
T 2yrz_A 89 RVRA 92 (118)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
No 129
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.51 E-value=0.061 Score=43.04 Aligned_cols=79 Identities=15% Similarity=0.180 Sum_probs=47.7
Q ss_pred eEEEEec---CCCcEEEEEEcCCCC---CCcEEEEeccCCC---CCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 45 QVHISLA---GDSHMRVTWITDDES---SPSVVEYGTSPGG---YNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 45 qv~l~~~---~~~~~~i~W~t~~~~---~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
+|+|-.. +++++.|+|.-.... ..-.|.|...... ...... . ...+-...+.|+||+|+|.|
T Consensus 18 ~v~l~~~~a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~------~---v~~~~~~~~~l~~L~p~T~Y 88 (120)
T 1ujt_A 18 LVRLHNPVVLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL------D---AKVPTERSAVLVNLKKGVTY 88 (120)
T ss_dssp CEEECCCCCCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE------E---CCCTTCCEEEEESCCSSEEE
T ss_pred EEEeeccEEccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE------E---ecCCCcCEEEECCCCCCCEE
Confidence 4555333 478999999964221 1236778776431 111100 0 01222456789999999999
Q ss_pred EEEecc--------cCCeeEEECCC
Q 013955 116 FYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p 132 (433)
.++|.. .|....|+|+.
T Consensus 89 ~~~V~A~n~~G~Gp~S~~v~~~T~e 113 (120)
T 1ujt_A 89 EIKVRPYFNEFQGMDSESKTVRTTE 113 (120)
T ss_dssp EEEEEEESSSCCCCCCCCEEEEECS
T ss_pred EEEEEEECCCccCCCCCCEEEECCC
Confidence 999964 25667777764
No 130
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=95.46 E-value=0.01 Score=59.36 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=41.2
Q ss_pred eEEEEEecCCCCCC-hHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhC--CCceeccCCCcCC
Q 013955 137 ITFAVAGDLGQTGW-TKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASA--RPWMVTQGNHEKE 208 (433)
Q Consensus 137 ~~f~~~gD~~~~~~-~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~--iP~~~v~GNHD~~ 208 (433)
.+++++||+|.... ..++++.......+-+|++||+++.+....+ ....+..+... -.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p~~d~yVFLGDyVDRGp~S~E---vl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIE---CVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCTTTCCEEECSCCSSSSSCHHH---HHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCCCcceEEEcCCcCCCCCCHHH---HHHHHHHHhhhCCCeEEEecCCccHH
Confidence 45899999985421 1233332223456889999999987654221 11222222211 2488899999973
No 131
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.37 E-value=0.013 Score=45.92 Aligned_cols=70 Identities=16% Similarity=0.235 Sum_probs=42.3
Q ss_pred CCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc------
Q 013955 52 GDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR------ 121 (433)
Q Consensus 52 ~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~------ 121 (433)
+.++++|.|.-.... ..-.|+|...... .+.... .+.....+|++|+|++.|.|||..
T Consensus 23 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~-----------~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~ 90 (110)
T 2db8_A 23 HNNSATLSWKQPPLSTVPADGYILELDDGNGG-QFREVY-----------VGKETMCTVDGLHFNSTYNARVKAFNKTGV 90 (110)
T ss_dssp SSSEEEECCBCCTTCCSCCSEEEEEECCSSSS-CCEEEE-----------EESCSCEEEECCCSSSCCEEEEEEECSSCB
T ss_pred CCCEEEEEECCCCCCCCCccEEEEEEEeCCCC-ceEEEE-----------eCCcCEEEECCCCCCCEEEEEEEEEeCCcC
Confidence 478999999876532 2235667654321 111100 001123568899999999999964
Q ss_pred --cCCeeEEECCCC
Q 013955 122 --QGPEFEFKTPPA 133 (433)
Q Consensus 122 --~s~~~~F~T~p~ 133 (433)
.|+...++|.+.
T Consensus 91 s~~S~~~~~~T~~~ 104 (110)
T 2db8_A 91 SPYSKTLVLQTSEG 104 (110)
T ss_dssp CCCCSCEECCCCCC
T ss_pred CCCCCCEEEEcCCC
Confidence 255677887653
No 132
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=95.34 E-value=0.06 Score=45.95 Aligned_cols=82 Identities=11% Similarity=0.138 Sum_probs=50.8
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+++...+.++++|.|.-.... ..-.|+|....+ ... .. ...+....+.|++|+|++.|.|+
T Consensus 7 p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~--~~~------~~----~~~~~~~~~~i~~L~p~t~Y~~~ 74 (186)
T 1qr4_A 7 LDNPKDLEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSG--KKN------EM----EIPVDSTSFILRGLDAGTEYTIS 74 (186)
T ss_dssp -CCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECTTC--CEE------EE----EECTTCSEEEEESCCSSCEEEEE
T ss_pred CcCCCceEEEecCCCEEEEEEeCCCCCccEEEEEEEeCCC--Cee------EE----ECCCCCCEEEECCCCCCCEEEEE
Confidence 457889988877799999999975432 334667764321 110 00 01122234678999999999999
Q ss_pred eccc-----C--CeeEEECCCC
Q 013955 119 CGRQ-----G--PEFEFKTPPA 133 (433)
Q Consensus 119 v~~~-----s--~~~~F~T~p~ 133 (433)
|... + ....++|+|.
T Consensus 75 V~a~~~~~~s~~~~~~~~t~p~ 96 (186)
T 1qr4_A 75 LVAEKGRHKSKPTTIKGSTVVG 96 (186)
T ss_dssp EEEESSSCBCCCEEEEEECCCC
T ss_pred EEEEcCCccCCCEEEEEECCCC
Confidence 9641 2 2355666553
No 133
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=95.28 E-value=0.084 Score=45.81 Aligned_cols=76 Identities=12% Similarity=0.096 Sum_probs=47.9
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCC--C----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDD--E----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~--~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..+...|..+.+...+.+++.|.|.... . ...-.|+|........+.... ..........|++|+
T Consensus 102 ~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~---------~~~~~~~~~~i~~L~ 172 (205)
T 1cfb_A 102 DVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN---------IFDWRQNNIVIADQP 172 (205)
T ss_dssp CCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE---------ECCTTCCEEEECSCC
T ss_pred cCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE---------ecCCCccEEEEcCCC
Confidence 3455678888888667899999998764 1 123356676654322111110 011123456889999
Q ss_pred CCCEEEEEecc
Q 013955 111 HDTVYFYRCGR 121 (433)
Q Consensus 111 p~t~Y~Y~v~~ 121 (433)
|++.|.++|..
T Consensus 173 p~t~Y~~~V~A 183 (205)
T 1cfb_A 173 TFVKYLIKVVA 183 (205)
T ss_dssp SSCEEEEEEEE
T ss_pred CCcEEEEEEEE
Confidence 99999999964
No 134
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=95.24 E-value=0.068 Score=49.11 Aligned_cols=82 Identities=26% Similarity=0.390 Sum_probs=50.4
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCC------CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDD------ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~------~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
.+...| ++.+...+.+++.|.|.-.. ....-.|+|....+.. ... . ..+.....+|++|+|
T Consensus 196 ~P~~~p-~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~-~~~-------~----~~~~~~~~~~~~L~p 262 (290)
T 3l5i_A 196 PPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE-TAV-------N----VDSSHTEYTLSSLTS 262 (290)
T ss_dssp CCSSCC-CEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC-EEE-------E----EETTCSEEEECSCCT
T ss_pred CCCCCC-eeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe-EEE-------E----eCCCceEEEeCCCCC
Confidence 344444 67676667899999997321 1223456676653321 100 0 112233567999999
Q ss_pred CCEEEEEecc-------cCCeeEEECCC
Q 013955 112 DTVYFYRCGR-------QGPEFEFKTPP 132 (433)
Q Consensus 112 ~t~Y~Y~v~~-------~s~~~~F~T~p 132 (433)
++.|.++|.. .|....|+|++
T Consensus 263 ~t~Y~~~V~A~n~~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 263 DTLYMVRMAAYTDEGGKDGPEFTFTTPK 290 (290)
T ss_dssp TCEEEEEEEEEETTEEEECCCEEEECCC
T ss_pred CCEEEEEEEEEeCCCCCCCCceEeecCC
Confidence 9999999964 35678888865
No 135
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=95.24 E-value=0.3 Score=44.49 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=48.6
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+...|..+.+...+.++++|.|...... ..-.|+|....+.......-. ...+....+.|++|+|++.|.+
T Consensus 104 ~p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~t~Y~~ 175 (283)
T 1tdq_A 104 EIDAPKNLRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP--------KGIGPTTKTTLTDLVPGTEYGV 175 (283)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE--------CCSSSEEEEEECSCCTTCEEEE
T ss_pred CCCCCCceEEEecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEECC--------CCCcccceEEEecCCCCCEEEE
Confidence 4567888888877899999999987422 334667765543211110000 0111256678999999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 176 ~V~A 179 (283)
T 1tdq_A 176 GISA 179 (283)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
No 136
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=95.24 E-value=0.098 Score=46.39 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=58.3
Q ss_pred CCCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 34 PWDPKPSSHPQQVHISLAGDSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 34 ~~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
|+.......|..+++...+.+++.|+|..+.... .-.|+|...... ....... ........+.|.
T Consensus 100 P~~~vk~~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~~--------~~~~~~~~~~l~ 170 (214)
T 2b5i_B 100 PFENLRLMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPLL--------TLKQKQEWICLE 170 (214)
T ss_dssp GGGSBCCCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCCE--------EECSCCCEEEEC
T ss_pred cccccCCCCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeeee--------eecccceEEEec
Confidence 4445556789999998777789999999875321 245777665321 1111000 011224467789
Q ss_pred CCCCCCEEEEEecc------------cCCeeEEECCCC
Q 013955 108 PLEHDTVYFYRCGR------------QGPEFEFKTPPA 133 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~------------~s~~~~F~T~p~ 133 (433)
+|+||+.|..||.. +|....|+|.+.
T Consensus 171 ~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 171 TLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp SCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred cCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 99999999999863 245678888763
No 137
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=95.21 E-value=0.044 Score=47.76 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=46.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+...|..+++...++++++++|..+... ..-.|+|.......... . . ..++....++|+||+|+|.|.+
T Consensus 103 ~~~~P~~l~v~~~t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~-~-----~----~v~~~~t~~~l~gL~p~t~Y~~ 172 (195)
T 2qbw_A 103 VSSVPTNLEVVAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQ-E-----F----TVPYSSSTATISGLKPGVDYTI 172 (195)
T ss_dssp -CCSSCCCEEEEEETTEEEEECCCCCSSCSEEEEEEEETTCCSCCE-E-----E----EEETTCSEEEECSCCTTCEEEE
T ss_pred cCCCCcccEEEeCCCCEEEEEEeCCCCCccEEEEEEEECCCCCcce-E-----E----EeCCCCCEEEeCCCCCCCEEEE
Confidence 3467788888877799999999766422 23457776554321000 0 0 0112234578999999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 173 ~V~A 176 (195)
T 2qbw_A 173 TVYA 176 (195)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 138
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=95.20 E-value=0.084 Score=45.95 Aligned_cols=86 Identities=16% Similarity=0.083 Sum_probs=50.4
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC-----CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDE-----SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+..|..+.+...+. +++|.|..... ...-.|+|............-. ....+.....+|++|+|++
T Consensus 8 ~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~-------~~~~~~~~~~~i~~L~p~t 79 (209)
T 2vkw_A 8 TPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-------AKEASMEGIVTIVGLKPET 79 (209)
T ss_dssp CCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEE-------HHHHHHHSEEEECCCCTTC
T ss_pred CCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEee-------ccCCCccceEEeCCCCCCC
Confidence 344688888876555 69999998632 1223566765543221111100 0001123356789999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.|||.. .+....++|.+
T Consensus 80 ~Y~~~V~A~n~~G~~~~s~~~~~~T~~ 106 (209)
T 2vkw_A 80 TYAVRLAALNGKGLGEISAASEFKTQP 106 (209)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred eEEEEEEEEcCCcccCCcccccccccC
Confidence 99999964 23455677754
No 139
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.12 E-value=0.043 Score=43.33 Aligned_cols=72 Identities=13% Similarity=0.159 Sum_probs=42.7
Q ss_pred CCCCceE--EEEecCCCcEEEEEEcCCCCCCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 40 SSHPQQV--HISLAGDSHMRVTWITDDESSPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 40 ~~~p~qv--~l~~~~~~~~~i~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
...|..+ .+...+.++++|.|.-....... .|+|.... ..+..... ...+....++|++|+|++
T Consensus 18 P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~--~~~~~~~~--------~~~~~~~~~~v~~L~p~t 87 (121)
T 1wf5_A 18 PHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN--APWTVLLA--------SVDPKATSVTVKGLVPAR 87 (121)
T ss_dssp CCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT--CCCEEEES--------SCCTTCCEEEEESCCTTC
T ss_pred CccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC--CCceEeEc--------ccCCCccEEEECCcCCCC
Confidence 4467777 56555688999999866333332 34454432 11111100 112223457889999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 88 ~Y~frV~A 95 (121)
T 1wf5_A 88 SYQFRLCA 95 (121)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
No 140
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=95.11 E-value=0.24 Score=42.92 Aligned_cols=70 Identities=13% Similarity=0.078 Sum_probs=45.4
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
.|..+.+...+.++++|.|...... ..-.|+|............ . .........|++|+|++.|.++|
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~~~~~~~~~i~~L~p~t~Y~~~V 94 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-F---------VDSSVGYYTVTGLEPGIDYDISV 94 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE-E---------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCccEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE-E---------cCCCccEEEeCCCCCCCEEEEEE
Confidence 6888888877799999999987531 1345667655432111110 0 11223356789999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 95 ~a 96 (203)
T 2gee_A 95 YT 96 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 141
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=95.11 E-value=0.14 Score=45.06 Aligned_cols=68 Identities=15% Similarity=0.227 Sum_probs=43.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEec
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCG 120 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~ 120 (433)
..|..++.+-.++++++++|..+... ...-.|..--+. ... ++. ..... ..+++||+|+|.|.|+|.
T Consensus 152 ~Pp~NL~At~VT~tSVtLsW~aP~~~-~GI~gY~ly~~g-~~v--~~v-------~~~~t--syt~~gLk~~TeYsF~V~ 218 (238)
T 2w1n_A 152 NPVRDFKASEINKKNVTVTWTEPETT-EGLEGYILYKDG-KKV--AEI-------GKDET--SYTFKKLNRHTIYNFKIA 218 (238)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCC-TTEEEEEEEETT-EEE--EEE-------ETTCC--EEEECSCCTTCEEEEEEE
T ss_pred CCCCceEEEEccCCeEEEEecCCCCC-CCceeEEEEeCC-cee--EEe-------eccce--EEEecCCCCCCEEEEEEE
Confidence 78889999988899999999988543 233444433211 111 110 01111 235789999999999996
Q ss_pred c
Q 013955 121 R 121 (433)
Q Consensus 121 ~ 121 (433)
.
T Consensus 219 A 219 (238)
T 2w1n_A 219 A 219 (238)
T ss_dssp E
T ss_pred E
Confidence 4
No 142
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=95.07 E-value=0.054 Score=46.98 Aligned_cols=70 Identities=14% Similarity=0.158 Sum_probs=44.9
Q ss_pred CCceEEEEecC--CCcEEEEEEcCC--CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 42 HPQQVHISLAG--DSHMRVTWITDD--ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 42 ~p~qv~l~~~~--~~~~~i~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
.|.++.+.-.. ++++.|.|.... ....-.|+|............ . ..+....+.|+||+|++.|.+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~ 71 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA------T----IPGHLNSYTIKGLKPGVVYEG 71 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEE------E----ECTTCCEEEECSCCTTEEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEE------e----cCCCccEEEecCCCCCCEEEE
Confidence 57788777655 899999999873 123346777754432111110 0 112233678999999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 72 ~V~a 75 (201)
T 2ha1_A 72 QLIS 75 (201)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 143
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.96 E-value=0.14 Score=43.56 Aligned_cols=72 Identities=14% Similarity=0.186 Sum_probs=46.1
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+..|..+++...+.++++|.|...... ..-.|+|.............. .......+++|+|++
T Consensus 5 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t 73 (197)
T 3lpw_A 5 TPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGC 73 (197)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTC
T ss_pred CCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCC
Confidence 3457888888877899999999986321 223566665543221111100 112346789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|+|..
T Consensus 74 ~Y~~~V~a 81 (197)
T 3lpw_A 74 SYYFRVLA 81 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999964
No 144
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=94.93 E-value=0.1 Score=45.50 Aligned_cols=88 Identities=22% Similarity=0.300 Sum_probs=52.6
Q ss_pred CCCCCCCceEEEEecC--CCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAG--DSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~--~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..+...|..+.+...+ .+++.|.|.-..... .-.|+|............-. ...+....+.|++|+
T Consensus 103 ~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~ 174 (211)
T 3p4l_A 103 LVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIE--------PVVGNRLTHQIQELT 174 (211)
T ss_dssp CCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEE--------EEESSCSEEEECCCC
T ss_pred CCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEE--------EecCCeeEEEEcCCC
Confidence 3555688889888764 689999999764322 23566665433211100000 011223456889999
Q ss_pred CCCEEEEEecc--------cCCeeEEECCC
Q 013955 111 HDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 111 p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
|++.|.++|.. .|+...|+|..
T Consensus 175 p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 175 LDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp TTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred CCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 99999999964 24555666543
No 145
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.89 E-value=0.047 Score=43.06 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=44.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.....+++.|.|....... .-.|+|............ ........+.|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~ 88 (119)
T 1wfn_A 19 GPVGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH----------YLPNVTLEYRVTGLTALTTYT 88 (119)
T ss_dssp CCCSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE----------EECSSCCEEEEESCCTTCEEE
T ss_pred CCCCceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEE----------EeCCCceEEEEcCCCCCCEEE
Confidence 457788887667899999998764322 234556544321110000 112234457789999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
+||..
T Consensus 89 ~~V~A 93 (119)
T 1wfn_A 89 IEVAA 93 (119)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
No 146
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.84 E-value=0.015 Score=45.13 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=46.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+++.-.+.+++.|.|.-.... ..-.|+|.......... . . ...+....++|+||+|+|.|.++
T Consensus 8 p~~P~~l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~---~---~----~v~~~~~~~~l~~L~p~t~Y~~~ 77 (105)
T 2ekj_A 8 RSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEK---S---V----SVPGARSHVTLPDLQAATKYRVL 77 (105)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCC---C---B----CCBTTSSEEEECSCCSSCCCBCB
T ss_pred CCCCCceEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccE---E---E----EeCCCcCEEEeCCCCCCCEEEEE
Confidence 347899998877799999999887422 23345565443211100 0 0 01122345789999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 78 V~A 80 (105)
T 2ekj_A 78 VSA 80 (105)
T ss_dssp BCB
T ss_pred EEE
Confidence 975
No 147
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.76 E-value=0.12 Score=38.72 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=51.5
Q ss_pred CCCceEEEEecC--CCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAG--DSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~--~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|-|+.++-.. +++-.|.|..+..+ .+-.+.|+.......+.-. .-++....-+|+||+||..|.
T Consensus 6 ~gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~----------~Ip~h~nSYtI~GL~P~~~YE 75 (98)
T 1oww_A 6 SGPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEA----------TIPGHLNSYTIKGLKPGVVYE 75 (98)
T ss_dssp CCCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEE----------EECSSCCEEEECSCCSSEEEE
T ss_pred CcceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCCCceeEE----------EecCccceEEEecCCCCcEEE
Confidence 346677676444 78999999998643 3446677776543222110 123455566899999999999
Q ss_pred EEecc-----cC--CeeEEEC
Q 013955 117 YRCGR-----QG--PEFEFKT 130 (433)
Q Consensus 117 Y~v~~-----~s--~~~~F~T 130 (433)
=+|-+ ++ ..|.|.|
T Consensus 76 ~qv~S~~ryG~~Evs~f~FtT 96 (98)
T 1oww_A 76 GQLISIQQYGHQEVTRFDFTT 96 (98)
T ss_dssp EEEEEEESSSCEEEEEEEEEE
T ss_pred EEEEEeeccCcccceEEEEEe
Confidence 99865 12 2677766
No 148
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.74 E-value=0.12 Score=44.85 Aligned_cols=70 Identities=20% Similarity=0.246 Sum_probs=46.3
Q ss_pred CCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
.|..+.+...+.+++.|.|..... ...-.|+|....+....... ...+....+.|+||+|++.|.++|
T Consensus 116 ~P~~l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~~V 185 (203)
T 2gee_A 116 PPTDLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL----------SISPSDNAVVLTNLLPGTEYVVSV 185 (203)
T ss_dssp CCEEEEEEEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCEEE----------EECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCCceEEEEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccEEE----------EcCCCcCEEEECCCCCCCEEEEEE
Confidence 688888877779999999998742 13346677764322111100 112234457889999999999999
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 186 ~A 187 (203)
T 2gee_A 186 SS 187 (203)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 149
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.66 E-value=0.099 Score=41.19 Aligned_cols=68 Identities=16% Similarity=0.282 Sum_probs=43.8
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++.-.+ +++.|.|.-..... .-.|+|..... ..... .........+|++|+|++.|.
T Consensus 19 ~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~-----------~~~~~~~~~~l~~L~p~t~Y~ 85 (116)
T 2edb_A 19 DQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETV-----------RVDSKQRYYSIERLESSSHYV 85 (116)
T ss_dssp CCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEE-----------EEETTCCEEEECSCCSSSBEE
T ss_pred CCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEE-----------EeCCCeeEEEeCCCCCCCEEE
Confidence 378889888777 99999998764322 23566664221 11000 011223456889999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 86 ~~V~A 90 (116)
T 2edb_A 86 ISLKA 90 (116)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99965
No 150
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=94.63 E-value=0.31 Score=44.60 Aligned_cols=71 Identities=17% Similarity=0.169 Sum_probs=47.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+.+...+.++++|.|..... ...-.|+|....+...... ........+.|++|+|++.|.++
T Consensus 113 ~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~L~p~t~Y~~~ 181 (290)
T 3r8q_A 113 VSPPRRARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----------TIKPDVRSYTITGLQPGTDYKIY 181 (290)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----------EECTTCSEEEECSCCTTCEEEEE
T ss_pred CCCCceeEEEEcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----------ecCCCccEEEECCCCCCCEEEEE
Confidence 36788898887789999999998643 2334566765543211110 01122334678999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 182 V~A 184 (290)
T 3r8q_A 182 LYT 184 (290)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
No 151
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=94.63 E-value=0.079 Score=46.30 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=45.6
Q ss_pred CCCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
....|..+.+... +.+++.|.|....... .-.|+|.............. ...+....++|++|+|+
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~--------~~~~~~~~~~i~~L~p~ 174 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPF 174 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG--------GGCSCCSEEEECSCCSS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc--------cccCccceEEeCCCCCC
Confidence 4557888888754 5789999998764322 23566665532111111000 00222345689999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
|.|.+||..
T Consensus 175 t~Y~~~V~A 183 (215)
T 1bqu_A 175 TEYVFRIRC 183 (215)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
No 152
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=94.63 E-value=0.14 Score=47.10 Aligned_cols=74 Identities=9% Similarity=0.031 Sum_probs=49.1
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.+...|..+.+...+.+++.|.|..... ...-.|+|............ ........+.|++|+|++.|.
T Consensus 19 ~~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~ 88 (290)
T 3r8q_A 19 PAIPAPTDLKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----------NLAPDSSSVVVSGLMVATKYE 88 (290)
T ss_dssp -CCCCCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----------EECTTCCEEEECSCCSSCEEE
T ss_pred CCCCCCCceEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----------EcCCCccEEEeCCCCCCCEEE
Confidence 4456899998887889999999998742 23346777765422211111 011224457889999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
|+|..
T Consensus 89 ~~V~a 93 (290)
T 3r8q_A 89 VSVYA 93 (290)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
No 153
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.61 E-value=0.14 Score=43.63 Aligned_cols=71 Identities=14% Similarity=0.218 Sum_probs=45.8
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+...+.+++.|.|....... .-.|+|............ . . ......|++|+|++
T Consensus 102 ~p~~p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~--~~~~~~~~~L~p~t 169 (197)
T 3lpw_A 102 RPLPPGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA-T---------V--KVTEATITGLIQGE 169 (197)
T ss_dssp CCCCCSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE-E---------E--SSSEEEECCCCTTC
T ss_pred CCCCCcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee-c---------c--cccEEEeCCcCCCC
Confidence 34578888888777999999999764322 235666654332211111 0 0 12235789999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|+|..
T Consensus 170 ~Y~~~V~A 177 (197)
T 3lpw_A 170 EYSFRVSA 177 (197)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999975
No 154
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=94.41 E-value=0.31 Score=42.38 Aligned_cols=83 Identities=10% Similarity=0.134 Sum_probs=52.7
Q ss_pred CCCCCCceEEEEecC----CCcEEEEEEcCCCCC--------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEE
Q 013955 38 KPSSHPQQVHISLAG----DSHMRVTWITDDESS--------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTV 105 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~----~~~~~i~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 105 (433)
.....|..+.+.... .+++.|.|....... .-.|+|....+. .+.... .+......
T Consensus 101 v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~-~~~~~~-----------~~~~~~~~ 168 (210)
T 3n06_B 101 VQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA-EWEIHF-----------AGQQTEFK 168 (210)
T ss_dssp BCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCS-SCEEEE-----------EETCSEEE
T ss_pred EecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCC-CCEEEe-----------ccCceEEE
Confidence 456688888887643 589999999865322 234566654332 111110 01123567
Q ss_pred eCCCCCCCEEEEEecc---------cCCeeEEECCC
Q 013955 106 IGPLEHDTVYFYRCGR---------QGPEFEFKTPP 132 (433)
Q Consensus 106 l~~L~p~t~Y~Y~v~~---------~s~~~~F~T~p 132 (433)
|.+|+|++.|.+||.. +|+...|+|+.
T Consensus 169 l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 169 ILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp ECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred EeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 8999999999999863 35667888865
No 155
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=94.35 E-value=0.15 Score=44.10 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=43.8
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
+..|..+.+.. +.++++|.|.-.... ..-.|+|........+...... .++......+ +|+|++.|
T Consensus 6 P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~--------~~~~~~~~~~-~L~p~t~Y 75 (205)
T 1cfb_A 6 PNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK--------VPNTDSSFVV-QMSPWANY 75 (205)
T ss_dssp CCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEE--------EETTCSEEEE-ECCSSEEE
T ss_pred CCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeec--------cCCCceEEEE-eCCCCCEE
Confidence 34899999998 999999999976322 2235667654322222111110 0111123345 89999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|||..
T Consensus 76 ~~~V~A 81 (205)
T 1cfb_A 76 TFRVIA 81 (205)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
No 156
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.30 E-value=0.094 Score=42.02 Aligned_cols=69 Identities=14% Similarity=0.229 Sum_probs=44.1
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+++.-.. +++.|.|.-..... .-.|+|.... .... . . .........+|++|+|++.|
T Consensus 28 P~~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~--~~~~------~-~---~~~~~~~~~~i~~L~p~t~Y 94 (126)
T 1x5i_A 28 PEVPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIGS--PHAQ------T-I---KVDYKQRYYTIENLDPSSHY 94 (126)
T ss_dssp CCSCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSSC--GGGE------E-E---ECCTTCCEEEECSCCSSCEE
T ss_pred CCCCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcCC--CCce------E-E---EeCCCeeEEEEeCCCCCCEE
Confidence 3488899888765 99999999875322 2345565211 0100 0 0 11233455789999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.++|..
T Consensus 95 ~~~V~A 100 (126)
T 1x5i_A 95 VITLKA 100 (126)
T ss_dssp CCEEEE
T ss_pred EEEEEE
Confidence 999964
No 157
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=94.16 E-value=0.16 Score=44.19 Aligned_cols=72 Identities=15% Similarity=0.172 Sum_probs=45.1
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
....|..+.+...+.+++.|.|...... ..-.|+|....+ .+..... ..+....+.|++|+|++.
T Consensus 109 ~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~--~~~~~~~---------~~~~~~~~~i~~L~p~t~ 177 (209)
T 2vkw_A 109 EPSAPKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSS--EWKPEIR---------LPSGSDHVMLKSLDWNAE 177 (209)
T ss_dssp SCCCCEEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTS--CCCCCEE---------ECTTCCEEEECSCCTTCE
T ss_pred CCCCCcccccccccCCeEEEEEECcccCCCCCceEEEEEECCCC--CCceeee---------cCCCccEEEecCCCCCCE
Confidence 3557777777766689999999986322 234567766221 1110000 112223467899999999
Q ss_pred EEEEecc
Q 013955 115 YFYRCGR 121 (433)
Q Consensus 115 Y~Y~v~~ 121 (433)
|.|||..
T Consensus 178 Y~~~V~A 184 (209)
T 2vkw_A 178 YEVYVVA 184 (209)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
No 158
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=94.14 E-value=0.11 Score=45.39 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=44.0
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeee--eecCeEEEEEeCCCCCCCEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLF--YRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~l~~L~p~t~Y 115 (433)
.|..+++...+.++++|.|.-...... -.|+|........+........+.... ........+.|++|+|++.|
T Consensus 4 pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 83 (214)
T 2ibg_A 4 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY 83 (214)
T ss_dssp CCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEE
T ss_pred CCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEE
Confidence 455666665678999999987643222 345555543212222111100000000 00123556789999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|||..
T Consensus 84 ~~~V~A 89 (214)
T 2ibg_A 84 RFRILA 89 (214)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
No 159
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=94.13 E-value=0.15 Score=48.64 Aligned_cols=74 Identities=15% Similarity=0.190 Sum_probs=48.6
Q ss_pred CCCCCceEEEEecCCC-cEEEEEEcCC--CCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 39 PSSHPQQVHISLAGDS-HMRVTWITDD--ESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~-~~~i~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
|...|..+.+...+.+ ++.|.|.-.. ....-.|+|....+......... .......+.|++|+|++.|
T Consensus 2 P~~~P~~l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y 72 (375)
T 3t1w_A 2 PLSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEY 72 (375)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEE---------EETTCCEEEECCCCTTCCE
T ss_pred CCCCCCccEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEE---------cCCCccEEEEcCCcCCCEE
Confidence 4568999988877777 9999999764 22334677776543221111100 1122345678999999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
.|+|..
T Consensus 73 ~~~V~a 78 (375)
T 3t1w_A 73 NVSVYT 78 (375)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
No 160
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=94.09 E-value=0.19 Score=43.94 Aligned_cols=85 Identities=11% Similarity=0.115 Sum_probs=51.7
Q ss_pred CCCCCCceEEEEec------CCCcEEEEEEcCCCCC----CcEEEEe-ccCCCCCeeEEeeeeEEeeeeeecCeEEEEEe
Q 013955 38 KPSSHPQQVHISLA------GDSHMRVTWITDDESS----PSVVEYG-TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVI 106 (433)
Q Consensus 38 ~~~~~p~qv~l~~~------~~~~~~i~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 106 (433)
.....|..+.+... ..+++.|.|....... .-.|+|. .........+. . ..+....+.|
T Consensus 107 v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~-~---------~~~~~~~~~l 176 (215)
T 1cd9_B 107 VKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVF-H---------LPSSKDQFEL 176 (215)
T ss_dssp BCCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEE-E---------EESCEEEEEE
T ss_pred eEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEe-c---------ccCcceEEEE
Confidence 35667888877654 4778999998764321 2356776 44322111111 0 0122456789
Q ss_pred CCCCCCCEEEEEecc-----------cCCeeEEECCC
Q 013955 107 GPLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 107 ~~L~p~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
.+|+|++.|.+||.. +|....|+|+.
T Consensus 177 ~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 177 CGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred cCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 999999999999863 24455676654
No 161
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=94.09 E-value=0.13 Score=47.82 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=53.2
Q ss_pred CCCCCCceEEEEec--CCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLA--GDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~--~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
.....|..+.+... +.+++.|+|....... .-.|+|...... .+...... ..........|++|+|
T Consensus 198 ~~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~-~w~~~~~~-------~~~~~~~~~~l~~L~p 269 (303)
T 1i1r_A 198 VKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDAS-TWSQIPPE-------DTASTRSSFTVQDLKP 269 (303)
T ss_dssp EECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCS-SCEECCGG-------GGCSCCSEEEECSCCT
T ss_pred EecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCC-CceEEccc-------cCCCceeEEEeCCCCC
Confidence 35567888887754 4789999999764322 235667665422 11111000 0012234568999999
Q ss_pred CCEEEEEecc-----------cCCeeEEECCC
Q 013955 112 DTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 112 ~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
+|.|.+||.. +|+...|+|+.
T Consensus 270 ~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 270 FTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp TCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred CCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 9999999864 24566787764
No 162
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=93.73 E-value=0.31 Score=49.48 Aligned_cols=82 Identities=17% Similarity=0.275 Sum_probs=50.7
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
...|..+.+...+.++++|+|..+.... .-.|+|........... ..+....++|+||+|+|.|
T Consensus 441 ~~~Ps~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~------------v~~~~ts~~l~gL~P~T~Y 508 (536)
T 3fl7_A 441 QTEPPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNV------------RRTEGFSVTLDDLAPDTTY 508 (536)
T ss_dssp SCCCCEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEE------------EEESSSEEECCSCCSSCEE
T ss_pred ccCCCCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEE------------EcCCCCEEEECCCCCCCEE
Confidence 3467777776566899999999764322 23567766543211000 0111234678999999999
Q ss_pred EEEecc--------cCCeeEEECCCC
Q 013955 116 FYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 116 ~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.++|.. .|+...|+|++.
T Consensus 509 ~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 509 LVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp EEEEEEECC---CEECCCEEEECCC-
T ss_pred EEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 999964 356778888763
No 163
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=93.46 E-value=0.041 Score=42.10 Aligned_cols=64 Identities=19% Similarity=0.186 Sum_probs=39.7
Q ss_pred EEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 48 ISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 48 l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
++-.++++++|+|...... ..-.|+|....+.... .. . ..++....+.|+||+|||.|...|..
T Consensus 14 vt~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~-~~-----~----~v~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 14 VTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEP-QY-----L----DLPSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp CCCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCC-EE-----E----EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcc-eE-----E----ECCCCccEEEECCCCCCCEEEEEEEE
Confidence 3434578999999876422 3346677766432110 00 0 12233456789999999999999854
No 164
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=93.10 E-value=0.59 Score=41.66 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=54.2
Q ss_pred CCCCCCCceEEEEecC-CCcEEEEEEcCCCCC------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 37 PKPSSHPQQVHISLAG-DSHMRVTWITDDESS------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~-~~~~~i~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
...+..|..+.+.... ..++.|.|..+.... .-.|+|........+.... .......+.+.+|
T Consensus 110 iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~----------~~~t~~~i~l~~L 179 (223)
T 3up1_A 110 IVKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVN----------LSSTKLTLLQRKL 179 (223)
T ss_dssp SBCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEE----------ESSSEEEEEGGGS
T ss_pred eEEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEE----------ecCceeEEecccc
Confidence 3455588888888765 678999999874221 2356676653212222110 1122334567899
Q ss_pred CCCCEEEEEecc------------cCCeeEEECCCC
Q 013955 110 EHDTVYFYRCGR------------QGPEFEFKTPPA 133 (433)
Q Consensus 110 ~p~t~Y~Y~v~~------------~s~~~~F~T~p~ 133 (433)
+|++.|..||.. +|....|+|++.
T Consensus 180 ~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 180 QPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp CTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 999999999853 245577888663
No 165
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=93.09 E-value=0.29 Score=46.42 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=46.6
Q ss_pred CCCCceEEEEecCCC-cEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 40 SSHPQQVHISLAGDS-HMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~-~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
...|..+.+.-.+.+ ++.|.|..... ...-.|+|....+......... ..+....+.|++|+|++.|.
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~ 72 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---------VHADQSSCTFDNLSPGLEYN 72 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---------ECTTCCEEECCCCCTTSCEE
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---------ecCCcCEEEECCCCCCCEEE
Confidence 457889988866655 69999998642 2334677766543211111100 12223457899999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
|+|..
T Consensus 73 ~~V~a 77 (368)
T 1fnf_A 73 VSVYT 77 (368)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 166
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=93.06 E-value=0.72 Score=40.80 Aligned_cols=73 Identities=16% Similarity=0.205 Sum_probs=46.6
Q ss_pred CCCCCceEEEEecC-CCcEEEEEEcCCCCC-----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISLAG-DSHMRVTWITDDESS-----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~~~-~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
....|..|++...+ .+++.|.|....... .-.|+|............. .......+.|.+|+||
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~~----------~~~~~~~~~l~~L~p~ 190 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVE----------ILEGRTECVLSNLRGR 190 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEEE----------ECTTCCEEEECCCCSS
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEEE----------EecCceEEEEcccCCC
Confidence 45689999988765 789999999875321 2356676543221111000 0111235778999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|..||..
T Consensus 191 t~Y~vqVRa 199 (227)
T 1eer_B 191 TRYTFAVRA 199 (227)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 999999863
No 167
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=92.62 E-value=0.12 Score=51.31 Aligned_cols=71 Identities=17% Similarity=0.190 Sum_probs=47.2
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
..|..+++.-.+.++++++|..+.. ...-.|+|..+..... .. +.. ..+-..+++|+||+|||.|..+
T Consensus 371 ~~~~~l~~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~----~~---~~~---~~~~~~~~~i~~L~p~t~Y~~~ 440 (461)
T 3csg_A 371 SVPTNLEVVAATPTSLLISWDASYSSSVSYYRITYGETGGNSP----VQ---EFT---VPGSKSTATISGLSPGVDYTIT 440 (461)
T ss_dssp CSSCCCEEEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSC----CE---EEE---EETTCCEEEECSCCTTCEEEEE
T ss_pred CCCcceEEeccCCCeEEEEecCCCCCcceEEEEEEEECCCCcc----ce---EEE---ecCCCceEEecCCCCCCEEEEE
Confidence 4688899998889999999987621 1234677776642110 00 000 1122356899999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 441 v~a 443 (461)
T 3csg_A 441 VYA 443 (461)
T ss_dssp EEE
T ss_pred EEE
Confidence 964
No 168
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=92.22 E-value=0.5 Score=43.91 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=50.9
Q ss_pred CCCCCceEEEEec------CCCcEEEEEEcCCCCC----CcEEEEe-ccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 39 PSSHPQQVHISLA------GDSHMRVTWITDDESS----PSVVEYG-TSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 39 ~~~~p~qv~l~~~------~~~~~~i~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
....|..+.+... ..+++.|+|....... .-.|+|. ..... .+..... .......+.|+
T Consensus 202 ~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~-~w~~~~~---------~~~~~~~~~l~ 271 (313)
T 2d9q_B 202 KLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEA-SWALVGP---------LPLEALQYELC 271 (313)
T ss_dssp ECCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCC-CCEEEEE---------ECSCEEEEEEC
T ss_pred ccCcCceeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCC-CcEEccc---------ccCcceEEEEe
Confidence 3557877766643 3589999999764221 2456776 43322 2221111 12235667899
Q ss_pred CCCCCCEEEEEecc-----------cCCeeEEECCC
Q 013955 108 PLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
+|+|+|.|.+||.. +|+...++|+.
T Consensus 272 ~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~ 307 (313)
T 2d9q_B 272 GLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTE 307 (313)
T ss_dssp SCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC
T ss_pred CCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCc
Confidence 99999999999863 23455677754
No 169
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.15 E-value=0.31 Score=38.41 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=49.2
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCC--CCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDE--SSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL 109 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~--~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L 109 (433)
+..++..|..+.+.. ..+++.|.|.-... ... -.|.|........... .... ..+.+. |
T Consensus 15 e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~-----------~~~~--~~~~~~-L 79 (117)
T 1wj3_A 15 KTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVL-----------NTNK--TSAELV-L 79 (117)
T ss_dssp CCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEE-----------EESS--SEEEEE-C
T ss_pred CCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEE-----------eCCC--cEEEEE-C
Confidence 345666777776665 67889999987621 222 2445654432211100 0111 245666 9
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
+|++.|.+||.. .|+...|+|...
T Consensus 80 ~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~ 111 (117)
T 1wj3_A 80 PIKEDYIIEVKATTDGGDGTSSEQIRIPRITS 111 (117)
T ss_dssp CCSSCEEEEEEEEESSCCCCBCCCEEECCCCC
T ss_pred CCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 999999999964 245667887653
No 170
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=92.08 E-value=0.53 Score=44.79 Aligned_cols=84 Identities=18% Similarity=0.302 Sum_probs=47.3
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
+...|. +.....+.++++|.|.-..... .-.|+|........ .... ...+......|++|+|++.
T Consensus 293 ~p~~p~-~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~-~~~~---------~~~~~~~~~~i~~L~~~t~ 361 (389)
T 2jll_A 293 EPSPPS-IHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQ-WLEK---------KVQGNKDHIILEHLQWTMG 361 (389)
T ss_dssp CCCCCC-EEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----C-CBCC---------EECTTCCEEEECSCCTTCE
T ss_pred CCCCCc-cccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcc-eeEe---------eccCCcceEEeCCcCCCCE
Confidence 444553 5555557899999998653222 23556655322111 1000 1122234568899999999
Q ss_pred EEEEeccc-----C--CeeEEECCCC
Q 013955 115 YFYRCGRQ-----G--PEFEFKTPPA 133 (433)
Q Consensus 115 Y~Y~v~~~-----s--~~~~F~T~p~ 133 (433)
|.|||... | ....|+|++.
T Consensus 362 Y~~~V~A~n~~G~s~~s~~~~~T~~~ 387 (389)
T 2jll_A 362 YEVQITAANRLGYSEPTVYEFSMPPK 387 (389)
T ss_dssp EEEEEEEEC-CCBCCCEEEEEECCCC
T ss_pred EEEEEEEEcCCcCCCceeeEecCCCC
Confidence 99999641 1 2347888663
No 171
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=91.93 E-value=0.56 Score=44.56 Aligned_cols=73 Identities=11% Similarity=0.045 Sum_probs=46.7
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
....|..+.+...+.+++.|.|..... ...-.|+|............ ...+......|+||+||+.|.+
T Consensus 277 ~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 346 (375)
T 3t1w_A 277 GLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----------RVPHSRNSITLTNLTPGTEYVV 346 (375)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEE----------EEETTCCEEEECSCCTTCEEEE
T ss_pred CCCCCCccEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeE----------EcCCCccEEEECCCCCCCEEEE
Confidence 345788888876678999999998533 23346777765431111100 0112233568899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 347 ~V~A 350 (375)
T 3t1w_A 347 SIVA 350 (375)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 172
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=91.78 E-value=1.4 Score=41.57 Aligned_cols=73 Identities=11% Similarity=0.060 Sum_probs=46.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+...|..+.+...+.+++.|.|...... ..-.|+|............ ..........|++|+|++.|.|
T Consensus 185 ~~~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~----------~~~~~~~~~~i~~L~p~t~Y~~ 254 (368)
T 1fnf_A 185 GLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED----------RVPHSRNSITLTNLTPGTEYVV 254 (368)
T ss_dssp CCCCCEEEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE----------EEETTCCEEEEESCCTTCEEEE
T ss_pred CCCCCCccEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccEE----------EeCCCcCEEEECCCCCCCEEEE
Confidence 3457888877766789999999876432 2345667655432111100 0112233467889999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 255 ~V~A 258 (368)
T 1fnf_A 255 SIVA 258 (368)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 173
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=91.39 E-value=0.25 Score=43.79 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=45.7
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCCC----CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDESS----PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
..|..+++...+.+++.|.|.-..... .-.|+|.......... +...... ..........|++|+|++.|.
T Consensus 100 ~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~~L~p~t~Y~ 174 (234)
T 3f7q_A 100 SEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVL---VDNPKNRMLLIENLRESQPYR 174 (234)
T ss_dssp CCCCCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECC---CSCTTCCEEEEECCCTTCCEE
T ss_pred CCCCccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEE---ecCCcceEEEeCCCCCCCeEE
Confidence 357888888778899999998654322 2356666544321110 0000000 111223456889999999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
++|..
T Consensus 175 ~~V~A 179 (234)
T 3f7q_A 175 YTVKA 179 (234)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 174
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=90.73 E-value=0.49 Score=41.29 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=43.2
Q ss_pred CCCCCCCCCceEEEEec-CCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 35 WDPKPSSHPQQVHISLA-GDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 35 ~~~~~~~~p~qv~l~~~-~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
.+......|..+++... ..+++.|.|..+.... .-.|+|........+..... .......+.|.+|+
T Consensus 105 ~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~---------~~~~~~~~~l~~L~ 175 (206)
T 3v6o_A 105 DSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEV---------YDAKSKSVSLPVPD 175 (206)
T ss_dssp GGGBCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEEEE---------CC---CEEEECCSC
T ss_pred cceEcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEec---------ccCcceeEEeecCC
Confidence 33445567887877765 4789999999874322 23466665532112211110 11112357899999
Q ss_pred CCCEEEEEecc
Q 013955 111 HDTVYFYRCGR 121 (433)
Q Consensus 111 p~t~Y~Y~v~~ 121 (433)
||+.|.+||..
T Consensus 176 p~t~Y~vqVRa 186 (206)
T 3v6o_A 176 LCAVYAVQVRC 186 (206)
T ss_dssp TTSCEEEEEEE
T ss_pred CCCEEEEEEEE
Confidence 99999999964
No 175
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=90.66 E-value=0.85 Score=39.42 Aligned_cols=87 Identities=17% Similarity=0.119 Sum_probs=49.1
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+. ...+++++.|...... ..+ .|+|............-. . ..........|.+|+|++
T Consensus 113 ~P~~p~~~~~~-~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~-----~--~~~~~~~~l~i~~L~~~~ 184 (215)
T 3mtr_A 113 TPSSPSIDQVE-PYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYD-----A--KEASMEGIVTIVGLKPET 184 (215)
T ss_dssp CCCCCEEEEEE-EETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEE-----H--HHHHHHTEEEEECCCTTC
T ss_pred CCCCCcceEEE-EecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccc-----c--ccccccccEEECCCCCCC
Confidence 34456666554 3467899999854321 222 366665543221111100 0 000111456789999999
Q ss_pred EEEEEecc--------cCCeeEEECCCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPPA 133 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p~ 133 (433)
.|.|||.. .|....|+|+|.
T Consensus 185 ~y~~~~~A~N~~G~s~~S~~~~v~T~p~ 212 (215)
T 3mtr_A 185 TYAVRLAALNGKGLGEISAASEFKTQPV 212 (215)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCC-
T ss_pred EEEEEEEEEeCCcccCcccceeeEeccc
Confidence 99999964 256678999874
No 176
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=89.53 E-value=0.14 Score=37.04 Aligned_cols=64 Identities=14% Similarity=0.083 Sum_probs=37.7
Q ss_pred EEEEcCCC--CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc-------cCCeeEE
Q 013955 58 VTWITDDE--SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR-------QGPEFEF 128 (433)
Q Consensus 58 i~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~-------~s~~~~F 128 (433)
|.|..+.. ...-.++|.++.....+... ..++-.+.-+|.||+||.+|.=++.+ ....+.|
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev----------~IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~Evtrfdf 71 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEA----------TIPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFDF 71 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEE----------EECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEEE
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEE----------EcCCccceEEEeccCCCcEEEEEEEeeeecccCCceEEEE
Confidence 46764422 24456778877654332211 12333444468899999999998754 1245777
Q ss_pred ECC
Q 013955 129 KTP 131 (433)
Q Consensus 129 ~T~ 131 (433)
+|-
T Consensus 72 TT~ 74 (89)
T 1q38_A 72 TTT 74 (89)
T ss_dssp CSS
T ss_pred Eec
Confidence 774
No 177
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=89.37 E-value=1.3 Score=45.35 Aligned_cols=71 Identities=18% Similarity=0.153 Sum_probs=47.5
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.+..|....++-.+.++++++|..+... ..-.||+....+..+..+ +.+ ... ..+++||.||+
T Consensus 9 ~P~pP~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v-~~~---------~~t--~~~V~~L~~g~ 76 (573)
T 3uto_A 9 EPEPPRFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPC-AKS---------RYT--YTTIEGLRAGK 76 (573)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEE-EEE---------SSS--EEEECCCCTTC
T ss_pred CCccCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEe-ccc---------cCC--EEEeCCCCCCC
Confidence 3446777778888899999999976422 224667777665433332 221 111 24689999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.|||..
T Consensus 77 ~Y~FRV~A 84 (573)
T 3uto_A 77 QYEFRIIA 84 (573)
T ss_dssp EEEEEEEE
T ss_pred cEeEEEEE
Confidence 99999964
No 178
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=89.24 E-value=0.32 Score=41.91 Aligned_cols=67 Identities=18% Similarity=0.168 Sum_probs=39.3
Q ss_pred eEEEEecCCCcEEEEEEcCCCC-CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 45 QVHISLAGDSHMRVTWITDDES-SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 45 qv~l~~~~~~~~~i~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
.+.+...+.+++.|.|.-.... ..-.|+|......... .. . ...+....+.|+||+|++.|.++|..
T Consensus 117 ~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~-~~-----~----~v~~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 117 SESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEP-QY-----L----DLPSTATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp CSSCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCC-EE-----E----EEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred ceEEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCce-eE-----E----EcCCceeEEEeCCCCCCCEEEEEEEE
Confidence 3445545588999999766321 1235566643221111 00 0 01223445789999999999999864
No 179
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=89.20 E-value=0.64 Score=46.62 Aligned_cols=88 Identities=11% Similarity=0.121 Sum_probs=54.3
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
..+..|..+++....++++.|.|..+..... -.|+|...... ....... .. ......+.+.|.+|+|+|
T Consensus 385 v~P~PP~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~-~w~~~~~-----~~-~~~~~~~~v~l~~L~P~T 457 (488)
T 2q7n_A 385 VAPHDPTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSK-KEVRNAT-----IR-GAEDSTYHVAVDKLNPYT 457 (488)
T ss_dssp BCCCCCEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSC-CEEEEEE-----EE-CCEEEEEEEEECSCCSSC
T ss_pred CCCCCCeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCC-CceEEEE-----Ee-cCCCcEEEEEeCCCCCCc
Confidence 3556888898887678999999998743322 24556554321 1111000 00 001235667999999999
Q ss_pred EEEEEecc----------cCCeeEEECCC
Q 013955 114 VYFYRCGR----------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~----------~s~~~~F~T~p 132 (433)
.|.+||.. +|+...|+|++
T Consensus 458 ~Y~~rVRA~~~g~G~WS~WS~~v~~~T~e 486 (488)
T 2q7n_A 458 AYTFRVRCSSKTFWKWSRWSDEKRHLTTE 486 (488)
T ss_dssp CBBCCEEEEESSCSSCCCCCCCCCBCCCC
T ss_pred eEEEEEEEEECCCCCCCCCcCCEeEECCC
Confidence 99999853 24455677765
No 180
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=88.94 E-value=0.35 Score=48.46 Aligned_cols=88 Identities=10% Similarity=0.047 Sum_probs=54.5
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
..+..|..+++....++++.|.|..+... -.-.|+|........... .... ......+.+.|.+|+|+|
T Consensus 380 VkP~PP~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~~------vsv~-~~~~~~~s~~l~~L~PgT 452 (483)
T 3e0g_A 380 VYPHTPTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQRN------VTIQ-GVENSSYLVALDKLNPYT 452 (483)
T ss_dssp BCCCCCEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEEE------CCCB-CCSSSBCCCCCCSCCSSS
T ss_pred cCCCCCeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceEE------EEEe-ccCCceeEEEEeccCCCc
Confidence 34568888888755688999999987532 235788877643211110 0000 011123456789999999
Q ss_pred EEEEEecc----------cCCeeEEECCC
Q 013955 114 VYFYRCGR----------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~----------~s~~~~F~T~p 132 (433)
.|..||.. +|+...|+|+.
T Consensus 453 ~Y~vrVRA~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 453 LYTFRIRCSTETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp SCEEEEECCCSSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEeeCCCCCcCCCCCceeeECCC
Confidence 99999864 24456677654
No 181
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=88.92 E-value=1.9 Score=45.02 Aligned_cols=79 Identities=10% Similarity=0.148 Sum_probs=46.7
Q ss_pred CCCCCCceEEEEec--CCC---cEEEEEEcCCCCC----CcEEEEecc-CCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 38 KPSSHPQQVHISLA--GDS---HMRVTWITDDESS----PSVVEYGTS-PGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 38 ~~~~~p~qv~l~~~--~~~---~~~i~W~t~~~~~----~~~v~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
.+...|..+.+... +.+ +++|.|.-..... .-.|+|... ....... ....... ...+....++|+
T Consensus 265 ~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~-~~~~~~~----~v~~~~~~~~l~ 339 (680)
T 1zlg_A 265 SAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVP-TKKKRRK----TTDGFQNSVILE 339 (680)
T ss_pred CCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCC-ccceEEE----EEcCCeeEEEeC
Confidence 56778899988876 567 9999999653222 234555521 1000000 0000000 122344678899
Q ss_pred CCCCCCEEEEEecc
Q 013955 108 PLEHDTVYFYRCGR 121 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~ 121 (433)
+|+|++.|.+||..
T Consensus 340 ~L~p~t~Y~~~V~A 353 (680)
T 1zlg_A 340 KLQPDCDYVVELQA 353 (680)
T ss_pred CCCCCCEEEEEEEE
Confidence 99999999999964
No 182
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=88.80 E-value=1.6 Score=39.58 Aligned_cols=75 Identities=13% Similarity=0.205 Sum_probs=43.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEE
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFY 117 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y 117 (433)
+...|..+.+... .+++.|+|.-... ...-.|+|............ +.. ..........+++|+|++.|.+
T Consensus 101 ~~~p~~~~~~~~~-~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~L~p~t~Y~~ 172 (290)
T 3l5i_A 101 ATHPVMDLKAFPK-DNMLWVEWTTPRESVKKYILEWCVLSDKAPCITD-----WQQ--EDGTVHRTYLRGNLAESKCYLI 172 (290)
T ss_dssp CCCCCEEEEEEEE-TTEEEEEEECCSSCCCEEEEEEEEECSSSCCCCE-----EEE--EETTCSEEECCSCCCTTCEEEE
T ss_pred CCCccceeEEEeC-CCeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcC-----eEE--ccCCCcceEEecCcCCccEEEE
Confidence 3444556655544 4799999987753 23346777665432110000 000 1123344567899999999999
Q ss_pred Eecc
Q 013955 118 RCGR 121 (433)
Q Consensus 118 ~v~~ 121 (433)
+|..
T Consensus 173 ~V~A 176 (290)
T 3l5i_A 173 TVTP 176 (290)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
No 183
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=87.76 E-value=0.73 Score=45.51 Aligned_cols=74 Identities=12% Similarity=0.051 Sum_probs=49.3
Q ss_pred CCeEEEEEecCCCCCC------hHHHHHHhhcC-CCceEEccccccccccc----------------hhhHHHhh-hhhh
Q 013955 135 FPITFAVAGDLGQTGW------TKSTLDHIGQC-KYDVHLLPGDLSYADYM----------------QHRWDTFG-ELVQ 190 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~------~~~~l~~i~~~-~pd~vl~~GD~~~~~~~----------------~~~w~~~~-~~~~ 190 (433)
.++++++.+..-.... ...+++.+++. +||.+|++|.+++.... ...++.++ ..+.
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 6799999998854432 23566777664 89999999999976532 12233333 3333
Q ss_pred hhh----hCCCceeccCCCcCC
Q 013955 191 PLA----SARPWMVTQGNHEKE 208 (433)
Q Consensus 191 ~l~----~~iP~~~v~GNHD~~ 208 (433)
++. ..+-++.+||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 333 346689999999995
No 184
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=87.70 E-value=2.5 Score=44.36 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=55.6
Q ss_pred CCCCCCCceEEEEecCCCcEEEEEEcCCCC------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 37 PKPSSHPQQVHISLAGDSHMRVTWITDDES------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 37 ~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
..+...|..+.+...++++++|.|.-.... ..-.|+|.............. .. ........+.|++|+
T Consensus 357 ~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~----~~--~~~~~~~~~~i~~L~ 430 (731)
T 2v5y_A 357 ADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV----SW--DTENSHPQHTITNLS 430 (731)
T ss_dssp CCCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEE----EC--CSSCSSCEEEECSCC
T ss_pred CCCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeE----EE--EecCCcceEEECCCC
Confidence 345577999988877899999999876321 123577766543211111000 00 112234457899999
Q ss_pred CCCEEEEEecc-------cCCeeEEECCC
Q 013955 111 HDTVYFYRCGR-------QGPEFEFKTPP 132 (433)
Q Consensus 111 p~t~Y~Y~v~~-------~s~~~~F~T~p 132 (433)
|++.|.++|.. .+....++|+.
T Consensus 431 p~t~Y~~~V~A~n~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 431 PYTNVSVKLILMNPEGRKESQELIVQTDE 459 (731)
T ss_dssp SSCEEEEEEEEECSSCEEECCCEEEECCC
T ss_pred CCCEEEEEEEEEcCCCCCCCceEEEEccC
Confidence 99999999864 24556777743
No 185
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=87.51 E-value=2.1 Score=37.24 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=46.1
Q ss_pred CCCCCCCCCceEEEEecCCCcEEEEEEcCCCC-------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeC
Q 013955 35 WDPKPSSHPQQVHISLAGDSHMRVTWITDDES-------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIG 107 (433)
Q Consensus 35 ~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~-------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 107 (433)
...-....|..+.+....+....|+|..+... -.-.|+|......-.. .... .........+.+.
T Consensus 93 ~~iVkp~PP~nl~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~-~~~~-------~~~~~~~~~~~~~ 164 (207)
T 1iar_B 93 SEHVKPRAPGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADF-RIYN-------VTYLEPSLRIAAS 164 (207)
T ss_dssp GGSBCCCCCEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCE-EEEE-------ECSSCCEEEECC-
T ss_pred ccccccCCCCCeEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchhh-eeee-------eecCCcEEEEEHH
Confidence 33445668888888754466899999987421 1245677665432111 1110 0122345556677
Q ss_pred CCCCCCEEEEEecc-----------cCCeeEEECCC
Q 013955 108 PLEHDTVYFYRCGR-----------QGPEFEFKTPP 132 (433)
Q Consensus 108 ~L~p~t~Y~Y~v~~-----------~s~~~~F~T~p 132 (433)
+|.||+.|..||.. +|....|+|.+
T Consensus 165 ~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~ 200 (207)
T 1iar_B 165 TLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSY 200 (207)
T ss_dssp ----CCCEEEEEEEECGGGTCCCCCCCCCEEEC---
T ss_pred HCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCC
Confidence 99999999999963 34567777754
No 186
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=86.97 E-value=2.3 Score=37.36 Aligned_cols=90 Identities=11% Similarity=0.212 Sum_probs=53.8
Q ss_pred CCCCCCCCceEEEEecCCCcEEEEEEcCCCC---------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEe
Q 013955 36 DPKPSSHPQQVHISLAGDSHMRVTWITDDES---------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVI 106 (433)
Q Consensus 36 ~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~---------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l 106 (433)
.......|..+.+.. .+.+.|.|..+... -.-.|+|......-........ . ...+....+.+
T Consensus 97 ~iVkp~PP~nltv~~--~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~~W~~~~~~~~-----~-~~~~~~~~~~~ 168 (219)
T 3tgx_A 97 ESIKPAPPFDVTVTF--SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGDPWAVSPRRKL-----I-SVDSRSVSLLP 168 (219)
T ss_dssp GCBCCCCCEEEEEEE--SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTSCTTSCCEEEE-----E-CSSCSEEEECT
T ss_pred eeEEeCCCCceEEEe--CCCEEEEEeCCcCCccccccccCEEEEEEEecCCCCceeccccee-----E-ecCCCEEEEEe
Confidence 334555788777773 46899999987431 1245677766421111101110 0 11234556778
Q ss_pred CCCCCCCEEEEEecc--------------cCCeeEEECCCC
Q 013955 107 GPLEHDTVYFYRCGR--------------QGPEFEFKTPPA 133 (433)
Q Consensus 107 ~~L~p~t~Y~Y~v~~--------------~s~~~~F~T~p~ 133 (433)
.+|.||+.|..||.. +|....|+|++.
T Consensus 169 ~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 169 LEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp TSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred ccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 899999999999952 255677888764
No 187
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=86.39 E-value=1 Score=40.22 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=42.4
Q ss_pred CCCCCCceEEEEecC--CC----cEEEEEEcCCCC--------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEE
Q 013955 38 KPSSHPQQVHISLAG--DS----HMRVTWITDDES--------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~--~~----~~~i~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (433)
.....|..+.++... .+ .+.|.|..+... -.-.|+|...... .+.... ......
T Consensus 129 v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~-~w~~~~-----------~~~~~~ 196 (236)
T 1axi_B 129 VQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNET-KWKMMD-----------PILTTS 196 (236)
T ss_dssp BCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCS-SCEECC-----------CBSSSE
T ss_pred cccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCC-ceEEEe-----------ccCCCE
Confidence 345578888655433 22 499999987532 1234566655321 111110 111235
Q ss_pred EEeCCCCCCCEEEEEecc
Q 013955 104 TVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 104 v~l~~L~p~t~Y~Y~v~~ 121 (433)
+.|.+|+||+.|..||..
T Consensus 197 ~~l~~L~p~t~Y~vqVRa 214 (236)
T 1axi_B 197 VPVYSLKVDKEYEVRVRS 214 (236)
T ss_dssp EEEEEEETTSCEEEEEEE
T ss_pred EEEeccCCCCEEEEEEEE
Confidence 678899999999999964
No 188
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=85.90 E-value=1.2 Score=38.55 Aligned_cols=73 Identities=8% Similarity=0.069 Sum_probs=45.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC-CCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL-EHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L-~p~t 113 (433)
.+...|..+.+...+.++++++|.-..... .-.|+|........ .+. ...+....+.|++| .|++
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~-----~~~------~~~~~~~~~~i~~L~~~~t 74 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DCK------AKRDTPTSCTVDYSTVYFV 74 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CEE------CCSSCTTEEECSSCCCTTS
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCCCCceEEEEEEEcCCCcc-----ccc------cccCCcceEEEcCCccccc
Confidence 345678888877667789999999775432 23455544321100 000 01222345789999 9999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.++|..
T Consensus 75 ~Y~~~V~A 82 (215)
T 1bqu_A 75 NIEVWVEA 82 (215)
T ss_dssp CEEEEEEE
T ss_pred cEEEEEEE
Confidence 99999865
No 189
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=85.13 E-value=0.4 Score=48.85 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=44.5
Q ss_pred CCCCCceEEEEe--cCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCC
Q 013955 39 PSSHPQQVHISL--AGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~--~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~ 112 (433)
....|..+.+.. ...+++.|.|........ -.|+|.............. ..........|++|+|+
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~--------~~~~~~~~~~i~~L~p~ 269 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE--------DTASTRSSFTVQDLKPF 269 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT--------SSCSCCSEEEECSCCSS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc--------cCcCceeEEEECCCCCC
Confidence 455777787753 347899999986642222 3556665542211111000 01122345678999999
Q ss_pred CEEEEEecc
Q 013955 113 TVYFYRCGR 121 (433)
Q Consensus 113 t~Y~Y~v~~ 121 (433)
+.|.+||..
T Consensus 270 t~Y~~~V~a 278 (589)
T 3l5h_A 270 TEYVFRIRC 278 (589)
T ss_dssp CCEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999964
No 190
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=84.74 E-value=6.5 Score=36.95 Aligned_cols=83 Identities=20% Similarity=0.161 Sum_probs=49.6
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCC-CCc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDES-SPS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
....|..+.+.-.+.+++.+.|...... ..+ .|+|........... ...+......|.+|+|++
T Consensus 195 ~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~-----------~~~~~~~~~~i~~l~~~~ 263 (389)
T 2jll_A 195 VPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIV-----------RSHGVQTMVVLNNLEPNT 263 (389)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEE-----------ECSTTCSEEEECSCCTTC
T ss_pred CCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEe-----------eccCCcceEEECCccCCC
Confidence 3446767777766788999999854322 212 355555432211111 112233456789999999
Q ss_pred EEEEEecc--------cCCeeEEECCC
Q 013955 114 VYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 114 ~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.|.|+|.. .+....++|.+
T Consensus 264 ~y~~~v~A~N~~G~~~~s~~~~~~t~~ 290 (389)
T 2jll_A 264 TYEIRVAAVNGKGQGDYSKIEIFQTLP 290 (389)
T ss_dssp EEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEEEEEEcCCccCCCCcceEEEecC
Confidence 99999864 13456677744
No 191
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=84.40 E-value=2.8 Score=39.06 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=45.6
Q ss_pred CCCCCceEEEEecC--CCcEEEEEEcCCCC------CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 39 PSSHPQQVHISLAG--DSHMRVTWITDDES------SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 39 ~~~~p~qv~l~~~~--~~~~~i~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
....|..+.+...+ ++++.|+|.-.... -.-.|+|............ .......+.|.+|+
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~-----------~~~~~~~~~l~~L~ 264 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWM-----------VKDLQHHCVIHDAW 264 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEE-----------CGGGCSEEEESSCC
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEc-----------ccCCceEEEEeCCC
Confidence 45678888888754 46999999987531 1235667665322111111 01112356789999
Q ss_pred CCCEEEEEecc
Q 013955 111 HDTVYFYRCGR 121 (433)
Q Consensus 111 p~t~Y~Y~v~~ 121 (433)
|++.|.+||..
T Consensus 265 p~t~Y~~rVrA 275 (325)
T 1n26_A 265 SGLRHVVQLRA 275 (325)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 99999999964
No 192
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=84.33 E-value=3.6 Score=38.04 Aligned_cols=81 Identities=12% Similarity=0.035 Sum_probs=45.9
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCC----cEEEEeccCCCCCeeEEee---eeEEeeeeeecCeEEEEEeCCCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP----SVVEYGTSPGGYNCGAEGE---STSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
....|..+++. ...+++.|.|..+..... -.|+|.............. +.... ..........+.|.+|+|
T Consensus 199 ~P~pP~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~-~~~~~~~~~~~~l~~L~p 276 (314)
T 3bpo_C 199 KPDPPHIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPE-FERNVENTSCFMVPGVLP 276 (314)
T ss_dssp ECCCCEEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTT-SSCCCSSEEEEEEESCCT
T ss_pred eeCCCCEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccc-cccccCCceEEEEccCCC
Confidence 35678888887 557899999998853222 3466665433211110000 00000 000113456778999999
Q ss_pred CCEEEEEecc
Q 013955 112 DTVYFYRCGR 121 (433)
Q Consensus 112 ~t~Y~Y~v~~ 121 (433)
++.|.+||..
T Consensus 277 ~t~Y~~qVra 286 (314)
T 3bpo_C 277 DTLNTVRIRV 286 (314)
T ss_dssp TSCEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 9999999864
No 193
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=83.73 E-value=10 Score=36.64 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=51.4
Q ss_pred CCCCCCCCCceEEEEecCCCcEEEEEEcCCCCC----------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEE
Q 013955 35 WDPKPSSHPQQVHISLAGDSHMRVTWITDDESS----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (433)
Q Consensus 35 ~~~~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 104 (433)
.+......|..|.+...+ +.+.|+|....... .-.|+|.... ......... ........+
T Consensus 104 ~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~--------~~~~~~~~~ 173 (419)
T 2gys_A 104 TQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL--------LSNTSQATL 173 (419)
T ss_dssp GGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE--------EESSSEEEE
T ss_pred HHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee--------cccceEEEe
Confidence 334466779999888765 69999999875321 1345666553 111111100 012223333
Q ss_pred EeCCCCCCCEEEEEecc--------------cCCeeEEECCCC
Q 013955 105 VIGPLEHDTVYFYRCGR--------------QGPEFEFKTPPA 133 (433)
Q Consensus 105 ~l~~L~p~t~Y~Y~v~~--------------~s~~~~F~T~p~ 133 (433)
.+.+|.|++.|..||.. +|+...|+|++.
T Consensus 174 ~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~ 216 (419)
T 2gys_A 174 GPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPG 216 (419)
T ss_dssp CTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred chhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeecccc
Confidence 44499999999999863 134567777654
No 194
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=83.68 E-value=3.3 Score=35.59 Aligned_cols=72 Identities=13% Similarity=0.161 Sum_probs=46.6
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC--CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES--SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.....|..+++.......+.|.|..+... -.-.|+|....+........ .......|.+|.|++.|
T Consensus 97 VkP~pP~~l~~~~~~~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~------------~~~~~~~l~~l~p~~~Y 164 (199)
T 2b5i_C 97 VIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRY 164 (199)
T ss_dssp EECCCCEEEEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEE------------CSSCEEEECSCCTTSCE
T ss_pred eecCCCcEEEEEECCCCCEEEEECCCCCCCceEEEEEEeecCCcccEEEec------------cCceEEEecCCCCCcEE
Confidence 34667888888866677999999987521 12357887654322211110 11234567899999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
..||..
T Consensus 165 ~vqVR~ 170 (199)
T 2b5i_C 165 TFRVRS 170 (199)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999964
No 195
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=82.59 E-value=2.7 Score=43.89 Aligned_cols=78 Identities=13% Similarity=0.205 Sum_probs=42.9
Q ss_pred CCCC-ceEEEEecCCCcEEEEEEcCCCC-CC---cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 40 SSHP-QQVHISLAGDSHMRVTWITDDES-SP---SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 40 ~~~p-~qv~l~~~~~~~~~i~W~t~~~~-~~---~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
...| ..+.+.-.+.++++|.|...... .. -.|+|....+.... ......+... .......+.|++|+|++.
T Consensus 160 P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~--~~~~~~w~~v--~~~~~~~~~i~~L~P~t~ 235 (680)
T 1zlg_A 160 PLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPS--EDDATHWQTV--AQTTDERVQLTDIRPSRW 235 (680)
T ss_pred cccccccceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcC--ccccCceEEE--EecCCCeEEeCCCCCCCE
Confidence 3457 67877767799999999975221 11 34556544220000 0000000000 011223467899999999
Q ss_pred EEEEecc
Q 013955 115 YFYRCGR 121 (433)
Q Consensus 115 Y~Y~v~~ 121 (433)
|.|||..
T Consensus 236 Y~frV~A 242 (680)
T 1zlg_A 236 YQFRVAA 242 (680)
T ss_pred EEEEEEE
Confidence 9999864
No 196
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=80.53 E-value=6.7 Score=35.15 Aligned_cols=72 Identities=13% Similarity=0.170 Sum_probs=45.9
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC--CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS--PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVY 115 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y 115 (433)
.....|..+.+.......+.|.|..+.... .-.|+|....+........ .......|.+|.|++.|
T Consensus 135 VkP~PP~nl~v~~~~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~------------~~~~~~~l~~L~p~~~Y 202 (247)
T 2erj_C 135 VIPWAPENLTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRY 202 (247)
T ss_dssp EECCCCEEEEEEESSSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEE------------CSSCEEEESCCCTTSCE
T ss_pred EEeCCCCeEEEEECCCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEec------------CCceEEEecCCCCCCEE
Confidence 345678888888666779999999885211 1247777644322211110 11224567899999999
Q ss_pred EEEecc
Q 013955 116 FYRCGR 121 (433)
Q Consensus 116 ~Y~v~~ 121 (433)
..||..
T Consensus 203 ~vqVR~ 208 (247)
T 2erj_C 203 TFRVRS 208 (247)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999963
No 197
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=80.01 E-value=3.3 Score=42.60 Aligned_cols=93 Identities=16% Similarity=0.317 Sum_probs=49.6
Q ss_pred CCCceEEEE-e-cCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeee--------EE--eeeeeec------CeEE
Q 013955 41 SHPQQVHIS-L-AGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGEST--------SY--RYLFYRS------GKIH 102 (433)
Q Consensus 41 ~~p~qv~l~-~-~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~--------~~--~~~~~~~------~~~~ 102 (433)
..|..+.+- . .+++++++.|..++. ......|....+. ......... .| .|..... -..+
T Consensus 36 ~~p~~~~~~t~~~~~~si~l~~~~p~~-~~~~~~y~vy~ng-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (608)
T 2uvf_A 36 DAPQQLQVPTLAYDESSIVLVWKAPED-TRKIVDYQIFSAG-KLLGKASDNNDNFSPAKPYIDHFYVNDKDNFQHKIVMQ 113 (608)
T ss_dssp CCCEEEECCTTCBCSSCEEEEEECCSC-CTTEEEEEEEETT-EEEEEHHHHHHHHCSSHHHHHHHHHTCGGGCSCCCCCC
T ss_pred CCCCceEeeecccCCcEEEEEEeCCcc-ccccccEEEEECC-EEeEeeccccccccccccccccccccccccccceeeee
Confidence 368777652 1 247899999998854 3344555544321 111000000 00 0000000 1246
Q ss_pred EEEeCCCCCCCEEEEEecc---------cCCeeEEECCCCCC
Q 013955 103 HTVIGPLEHDTVYFYRCGR---------QGPEFEFKTPPAQF 135 (433)
Q Consensus 103 ~v~l~~L~p~t~Y~Y~v~~---------~s~~~~F~T~p~~~ 135 (433)
+..+++|+|+|+|.|+|.. +++.-..+|.+...
T Consensus 114 ~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~~~ 155 (608)
T 2uvf_A 114 NFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAKPQ 155 (608)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCCCC
T ss_pred eEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccCCC
Confidence 7888999999999999964 23445566655433
No 198
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=78.93 E-value=3 Score=42.17 Aligned_cols=82 Identities=16% Similarity=0.246 Sum_probs=45.2
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC-----CcEEEEeccCCCC-CeeEEeeeeEEeeeeeecCeEEEEEeCCCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS-----PSVVEYGTSPGGY-NCGAEGESTSYRYLFYRSGKIHHTVIGPLEH 111 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~-----~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p 111 (433)
.++..|..+. ...++++++|.|.-+.... .-.|+|....... .....+....+... ........++|++|+|
T Consensus 332 ~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~ts~tI~gL~P 409 (536)
T 3fl7_A 332 RPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEP-PHGLTRTSVTVSDLEP 409 (536)
T ss_dssp CCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSC-SSSBCSSEEEEECCCT
T ss_pred cCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEe-ecCCccceeEeCCCCC
Confidence 3566788884 4466899999998764322 2245565432110 11110110111100 1112345678999999
Q ss_pred CCEEEEEecc
Q 013955 112 DTVYFYRCGR 121 (433)
Q Consensus 112 ~t~Y~Y~v~~ 121 (433)
++.|.|+|..
T Consensus 410 ~T~Y~frV~A 419 (536)
T 3fl7_A 410 HMNYTFTVEA 419 (536)
T ss_dssp TCEEEEEEEE
T ss_pred CCEEEEEEEE
Confidence 9999999954
No 199
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=78.14 E-value=3.8 Score=38.17 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=37.2
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCC---CCeeEEe--eeeEEeeeeeecCeEEEEEeCCCCCCCEEE
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGG---YNCGAEG--ESTSYRYLFYRSGKIHHTVIGPLEHDTVYF 116 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~ 116 (433)
.|.-+.++ ...+.+.++|.++......+=-|+.+... ....+.. +.++|+ =++|.+|++||
T Consensus 20 ~~~~L~at-~~~~~v~LsWs~s~~~v~~~~VYRdT~s~~sgr~ria~~~~st~tyt-------------Dt~~~~GttYy 85 (344)
T 3b4n_A 20 AQTTLMLS-QKSDVNYLGWSTDESKVARQEVYRGTTSNPDLRERIAVLDAETRTFK-------------DADTNSGLNYW 85 (344)
T ss_dssp CCEEEEEE-EETTEEEEEEEECCSSEEEEEEEEESSSCGGGCEEEEEECSSCCEEE-------------ECCCCTTCCCE
T ss_pred CCceeeee-ccCCeEEEEeecCCCCeeeEEEEccCCCCCCcceEEEeecccccEEE-------------ecCcCCCcEEE
Confidence 34444344 24889999999885222222335555432 1222222 222332 25899999999
Q ss_pred EEecc
Q 013955 117 YRCGR 121 (433)
Q Consensus 117 Y~v~~ 121 (433)
|.|..
T Consensus 86 YwVk~ 90 (344)
T 3b4n_A 86 YWVDV 90 (344)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99964
No 200
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=76.38 E-value=12 Score=32.84 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=46.5
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCCC-----C------------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDES-----S------------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHH 103 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~~-----~------------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (433)
..|. |.|+ ...+++.|.|.-+... . .-.|.|....... ..... .. .+.
T Consensus 110 gPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~--~~~~~---------~~--~~~ 174 (221)
T 4doh_R 110 GPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNR--TWSQC---------VT--NHT 174 (221)
T ss_dssp CCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTE--EEEEE---------EC--SSE
T ss_pred CCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCc--EEEEe---------ec--CcE
Confidence 4465 8888 5678999999965421 0 1245555543221 11100 11 135
Q ss_pred EEeCCCCCCCEEEEEecc----------cCCeeEEECCCC
Q 013955 104 TVIGPLEHDTVYFYRCGR----------QGPEFEFKTPPA 133 (433)
Q Consensus 104 v~l~~L~p~t~Y~Y~v~~----------~s~~~~F~T~p~ 133 (433)
+.|.+|+|+|.|..+|.. .|+..-|+|.++
T Consensus 175 ~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 175 LVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp EEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 789999999999999853 134555666553
No 201
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=75.80 E-value=12 Score=32.02 Aligned_cols=19 Identities=26% Similarity=0.235 Sum_probs=16.7
Q ss_pred EEEeCCCCCCCEEEEEecc
Q 013955 103 HTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 103 ~v~l~~L~p~t~Y~Y~v~~ 121 (433)
.++|.+|+|+|.|..+|..
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a 174 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRG 174 (201)
T ss_dssp EEEECSCCTTCEEEEEEEE
T ss_pred eEEEecCCCCCcEEEEEEE
Confidence 4789999999999999864
No 202
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=75.63 E-value=13 Score=34.11 Aligned_cols=66 Identities=15% Similarity=0.154 Sum_probs=37.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCC-------Cc----EEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCC
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESS-------PS----VVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP 108 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~-------~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 108 (433)
...|. |.+.. ..+++.|.|. +.... .. .|.|............+ ....++|.+
T Consensus 102 ~~pP~-v~~~~-~~~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~-------------~~~~~~l~~ 165 (306)
T 3s98_A 102 IGPPE-VHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYK 165 (306)
T ss_dssp CCCCE-EEEEE-CSSCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEE-------------ECTEEEECS
T ss_pred cCCCe-EEEEE-cCCEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEec-------------ccceEEEcc
Confidence 34554 77774 3468999998 42211 11 34454443322111110 123578999
Q ss_pred CCCCCEEEEEecc
Q 013955 109 LEHDTVYFYRCGR 121 (433)
Q Consensus 109 L~p~t~Y~Y~v~~ 121 (433)
|+|+|.|.++|..
T Consensus 166 L~p~t~Y~~~V~A 178 (306)
T 3s98_A 166 LSPETTYCLKVKA 178 (306)
T ss_dssp CCTTCEEEEEEEE
T ss_pred CCCCCeEEEEEEE
Confidence 9999999999853
No 203
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=75.22 E-value=10 Score=33.23 Aligned_cols=16 Identities=6% Similarity=0.040 Sum_probs=13.8
Q ss_pred eCCCCCCCEEEEEecc
Q 013955 106 IGPLEHDTVYFYRCGR 121 (433)
Q Consensus 106 l~~L~p~t~Y~Y~v~~ 121 (433)
+.+|+|++.|.|||..
T Consensus 167 ~~~L~~~t~Y~frV~A 182 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAA 182 (232)
T ss_dssp CBEESSSEEEEEEEEE
T ss_pred eecCccCCceEEEEEE
Confidence 5689999999999964
No 204
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=75.15 E-value=4.2 Score=37.20 Aligned_cols=73 Identities=8% Similarity=0.080 Sum_probs=44.9
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCC-CCCC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPL-EHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L-~p~t 113 (433)
.++..|..+.....+.++++++|.-..... .-.|+|........ .. . ...+....+.|++| .|++
T Consensus 102 ~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~-----~~---~---~~~~~~~~~~i~~L~~p~t 170 (303)
T 1i1r_A 102 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-----DC---K---AKRDTPTSCTVDYSTVYFV 170 (303)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-----CE---E---CCSSCTTEEECSSCCCTTS
T ss_pred CCCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCc-----cC---C---CcCCCceEEEECCcCcccc
Confidence 455678888776666789999999764322 23455543321000 00 0 11222346789999 9999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.+||..
T Consensus 171 ~Y~f~V~A 178 (303)
T 1i1r_A 171 NIEVWVEA 178 (303)
T ss_dssp CEEEEEEE
T ss_pred cEEEEEEE
Confidence 99999865
No 205
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=75.14 E-value=4.6 Score=35.07 Aligned_cols=65 Identities=11% Similarity=0.093 Sum_probs=40.0
Q ss_pred EEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEecc
Q 013955 46 VHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 46 v~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
+.|. ...+++.|.|......-.-.|.|........... ... ......+.|.+|+|++.|..+|..
T Consensus 115 v~v~-~~~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~-------~~~---~~~~~~~~i~~L~p~t~Ycv~Vra 179 (206)
T 4doh_B 115 MEIT-KDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHV-------KMV---RSGGIPVHLETMEPGAAYCVKAQT 179 (206)
T ss_dssp EEEE-EETTEEEEEECCCCTTCEEEEEEEESSSSCCCEE-------EEE---CCSSSEEEEEECCSSSCEEEEEEE
T ss_pred EEEE-eCCCEEEEEecCCCCcEEEEEEEEEcCCCceeEE-------eEE---ccCCeEEEEeCCCCCCcEEEEEEE
Confidence 6676 4688999999765333344677776643322100 000 011234779999999999999864
No 206
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=73.89 E-value=12 Score=33.70 Aligned_cols=70 Identities=16% Similarity=0.203 Sum_probs=42.0
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCC-CCcEE----EEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDES-SPSVV----EYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~-~~~~v----~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
+..|..+.+.....+++++.|...... ....+ +|...+. ..+...+.. . .....|.+|+|++.
T Consensus 199 P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~-~~w~~~~~~---------~--~~~~~i~~l~~~~~ 266 (305)
T 2nzi_A 199 PDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTA-ERWLRVGQA---------R--ETRYTVINLFGKTS 266 (305)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTS-CCEEEEEEE---------S--SSEEEECSCCSSCE
T ss_pred CCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCC-CccEECccc---------c--CceEEecCCCCCCe
Confidence 446777777756688999999864322 22233 3433322 222222110 1 23467899999999
Q ss_pred EEEEecc
Q 013955 115 YFYRCGR 121 (433)
Q Consensus 115 Y~Y~v~~ 121 (433)
|.|+|..
T Consensus 267 y~~~~~A 273 (305)
T 2nzi_A 267 YQFRVIA 273 (305)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999965
No 207
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=73.26 E-value=13 Score=35.73 Aligned_cols=64 Identities=16% Similarity=0.175 Sum_probs=38.6
Q ss_pred CCceEEEEecCCCcEEEEEEcCCCCC-----------CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCC
Q 013955 42 HPQQVHISLAGDSHMRVTWITDDESS-----------PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLE 110 (433)
Q Consensus 42 ~p~qv~l~~~~~~~~~i~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~ 110 (433)
.|. |.+.. ..+++.|+|. +.... .-.|.|............ +....++|++|.
T Consensus 108 pP~-v~~~~-~~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~-------------~~~~~~~i~~L~ 171 (414)
T 3se4_A 108 PPE-VHLEA-EDKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIE-------------NIYSRHKIYKLS 171 (414)
T ss_dssp CCE-EEEEE-CSSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEE-------------EECSEEEECCCC
T ss_pred CCe-EEEEE-cCCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEe-------------cCCcEEEEcCCC
Confidence 443 77663 3568999999 54221 134566655432211111 112347799999
Q ss_pred CCCEEEEEecc
Q 013955 111 HDTVYFYRCGR 121 (433)
Q Consensus 111 p~t~Y~Y~v~~ 121 (433)
|++.|.++|..
T Consensus 172 p~t~Y~~~V~A 182 (414)
T 3se4_A 172 PETTYCLKVKA 182 (414)
T ss_dssp TTCEEEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 99999999864
No 208
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=71.39 E-value=11 Score=38.01 Aligned_cols=74 Identities=14% Similarity=0.203 Sum_probs=42.3
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCC-CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEE
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDE-SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYR 118 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~ 118 (433)
...|..+.+.. ..+++.|.|..... ...-.|+|............ ... ..........+++|+|++.|.|+
T Consensus 401 ~~p~~~l~~~~-~~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~L~p~t~Y~~~ 472 (589)
T 3l5h_A 401 THPVMDLKAFP-KDNMLWVEWTTPRESVKKYILEWCVLSDKAPCITD-----WQQ--EDGTVHRTYLRGNLAESKCYLIT 472 (589)
T ss_dssp CSCCCSCEEEE-CSSSEEEECCCCSSCCSCBCCEEEEECSSSCCCEE-----ECC--BCSSCCEEECCSCCCSSSEEEEE
T ss_pred CCCcceEEEEE-CCCeEEEEEECCCCCccEEEEEEEECCCCCCCccC-----cEE--eeCCcceEEehhccccCcEEEEE
Confidence 33445665553 36899999987643 23345677665432110000 000 11222344557999999999999
Q ss_pred ecc
Q 013955 119 CGR 121 (433)
Q Consensus 119 v~~ 121 (433)
|..
T Consensus 473 V~A 475 (589)
T 3l5h_A 473 VTP 475 (589)
T ss_dssp ECB
T ss_pred EEE
Confidence 974
No 209
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=70.84 E-value=2.3 Score=46.04 Aligned_cols=20 Identities=15% Similarity=-0.065 Sum_probs=17.5
Q ss_pred EEEEeCCCCCCCEEEEEecc
Q 013955 102 HHTVIGPLEHDTVYFYRCGR 121 (433)
Q Consensus 102 ~~v~l~~L~p~t~Y~Y~v~~ 121 (433)
..+.|++|+|+|.|.|||..
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A 568 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKT 568 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEE
T ss_pred cceEeCCCCCCcEEEEEEEE
Confidence 45789999999999999865
No 210
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=63.97 E-value=16 Score=31.03 Aligned_cols=77 Identities=9% Similarity=0.070 Sum_probs=46.3
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCC---CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCE
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDES---SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTV 114 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~ 114 (433)
.++..|..+.......++|+++|.-.... ..-.|.|...... .... +..+. ........+.+.+|.+.+.
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~~~~Y~l~y~~~~~~-~~~~---c~~~~---~~~~~~c~~~~~~l~~~~~ 74 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGLPTNYSLTYHREGET-LMHE---CPDYI---TGGPNSCHFGKQYTSMWRT 74 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSCCCSEEEEEEEETTCC-CCEE---CSCSS---TTCTTEEEECGGGCCSSSC
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCCCCceEEEEEEECCCC-cccc---CCCCC---CCCCeEEEeCCCCccccee
Confidence 45568888877766789999999976432 2335666654321 1110 00000 0112345556678999999
Q ss_pred EEEEecc
Q 013955 115 YFYRCGR 121 (433)
Q Consensus 115 Y~Y~v~~ 121 (433)
|.++|..
T Consensus 75 Y~~~V~A 81 (210)
T 3n06_B 75 YIMMVNA 81 (210)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
No 211
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=63.90 E-value=0.89 Score=49.28 Aligned_cols=89 Identities=12% Similarity=0.022 Sum_probs=48.5
Q ss_pred CCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 40 SSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 40 ~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
+..|..+.+...+.+++.|+|.-+..+......|...=............. .........++|++|+|| +|.+||
T Consensus 793 p~~P~~l~~~~~~~~sv~LsW~~P~~~nG~I~~Y~V~y~~~~~~~~~~~~~----~~~~~~~~~~~l~~L~pg-tY~~rV 867 (897)
T 2dtg_E 793 DDIVGPVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDT----RKHFALERGCRLRGLSPG-NYSVRI 867 (897)
T ss_dssp CCCCCCCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCC----SSSCCCTTCCCCCSCCSS-EECCCC
T ss_pred CCCCcceEEEeCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCcceEEEEe----eeeecccCcEEECCCCCC-cEEEEE
Confidence 456666655545578899999877544334555544211100000000000 000111223578999999 699998
Q ss_pred cc--------cCCeeEEECCCC
Q 013955 120 GR--------QGPEFEFKTPPA 133 (433)
Q Consensus 120 ~~--------~s~~~~F~T~p~ 133 (433)
.. .|+...|+|++.
T Consensus 868 ~A~n~~G~G~~S~~v~~~T~~~ 889 (897)
T 2dtg_E 868 RATSLAGNGSWTEPTYFYVTDY 889 (897)
T ss_dssp CEEETTBCCCCCCCCEECCCCC
T ss_pred EEEeCCcccCCCCCEEEEeCCC
Confidence 64 356778888764
No 212
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=61.91 E-value=7.7 Score=34.09 Aligned_cols=30 Identities=23% Similarity=0.166 Sum_probs=20.9
Q ss_pred EEEeCCCCCCCEEEEEecc--------cCCeeEEECCC
Q 013955 103 HTVIGPLEHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 103 ~v~l~~L~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
..++++|+|++.|.|||.. .+....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 3567899999999999964 24555666643
No 213
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=61.55 E-value=34 Score=28.89 Aligned_cols=79 Identities=9% Similarity=0.062 Sum_probs=45.5
Q ss_pred CCCCCceEEEEec-CCCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeee-eecCeEEEEEeCCCCCCC
Q 013955 39 PSSHPQQVHISLA-GDSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLF-YRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 39 ~~~~p~qv~l~~~-~~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~l~~L~p~t 113 (433)
++..|..+..... ..++|++.|....... .-.|+|......-... ... ..... ........+.+.+|.+.+
T Consensus 4 pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~~~~Y~l~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~L~~~~ 79 (215)
T 1cd9_B 4 PPASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQ--GDT--IPDCVAKKRQNNCSIPRKNLLLYQ 79 (215)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSC--CCE--EEEEECCTTCCEEEEEGGGCCTTS
T ss_pred CCCCCeeeeeecCCCcccEEEEecCCCCCCCceeEEEEEEecCCccccc--ccc--cccCCCCCCCcEEEECCcccccce
Confidence 4567888876655 4789999999764321 2345665432110000 000 00000 112245667889999999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.++|..
T Consensus 80 ~Y~~~V~A 87 (215)
T 1cd9_B 80 YMAIWVQA 87 (215)
T ss_dssp CEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999865
No 214
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=61.25 E-value=2.7 Score=40.46 Aligned_cols=89 Identities=6% Similarity=-0.002 Sum_probs=0.0
Q ss_pred CCCCCceEEEEecCCCcEEEEEEcCCCCCC-----cEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCC-CCCC
Q 013955 39 PSSHPQQVHISLAGDSHMRVTWITDDESSP-----SVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGP-LEHD 112 (433)
Q Consensus 39 ~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~-----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~-L~p~ 112 (433)
....|..+.+....++++.|.|..+..... -.|+|......-........ ..|.+ |+|+
T Consensus 237 ~p~pP~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~~~~~---------------~~l~~~L~p~ 301 (380)
T 3lb6_C 237 KPLPPVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTATVENE---------------TYTLKTTNET 301 (380)
T ss_dssp CCCCCEEEEEC-------CEEEECCSSSCCSTTEEEEECC--------CCEESSS---------------CC--------
T ss_pred cCCCCceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeCCCCceEecccce---------------EEEeCccCCC
Q ss_pred CEEEEEecc--------------cCCeeEEECCCC-CCCeEEEEE
Q 013955 113 TVYFYRCGR--------------QGPEFEFKTPPA-QFPITFAVA 142 (433)
Q Consensus 113 t~Y~Y~v~~--------------~s~~~~F~T~p~-~~~~~f~~~ 142 (433)
+.|.+||.. +|+...|+|+.. ....-++++
T Consensus 302 t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~~~~~~~~~~i 346 (380)
T 3lb6_C 302 RQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLSKKTLLRFWL 346 (380)
T ss_dssp ----CCEEEEECTTTCSSCCCCCCCCC------------------
T ss_pred cEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCCCCCccEEEEh
No 215
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=61.08 E-value=43 Score=34.74 Aligned_cols=72 Identities=21% Similarity=0.240 Sum_probs=42.3
Q ss_pred EEecCCCcEEEEEEcCCCC-----CCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEeccc
Q 013955 48 ISLAGDSHMRVTWITDDES-----SPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRCGRQ 122 (433)
Q Consensus 48 l~~~~~~~~~i~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v~~~ 122 (433)
+.-.+.++++|.|...... ..-.|+|...... +.... ... ....+|.+|+|++.|.|+|...
T Consensus 270 ~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~--~~~~~---------~~~--~~~~~i~~L~p~t~Y~~~V~A~ 336 (731)
T 2v5y_A 270 LASVGATYLWIQLNANSINGDGPIVAREVEYCTASGS--WNDRQ---------PVD--STSYKIGHLDPDTEYEISVLLT 336 (731)
T ss_dssp EEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS--CEEEE---------ECC--SSEEEECSCCTTCEEEEEEEEE
T ss_pred eeccCCceEEEEeCCcccCCCCccEEEEEEEEECCCC--ceEEe---------ccC--cceEEEeCCCCCCEEEEEEEEE
Confidence 3444678999999754211 1225777664321 11100 011 1456889999999999998531
Q ss_pred ----------CCeeEEECCC
Q 013955 123 ----------GPEFEFKTPP 132 (433)
Q Consensus 123 ----------s~~~~F~T~p 132 (433)
|....++|.+
T Consensus 337 ~~N~~G~s~~S~~~~~~t~~ 356 (731)
T 2v5y_A 337 RPGEGGTGSPGPALRTRTKC 356 (731)
T ss_dssp CSSTTCSCCBCCCEEEECCC
T ss_pred ecCCCccccCCCcEEeeecC
Confidence 3446777754
No 216
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=55.06 E-value=12 Score=35.97 Aligned_cols=66 Identities=17% Similarity=0.278 Sum_probs=35.7
Q ss_pred eEEEEecCCCcEEEEEEcCCC--CC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCCEEEEEe
Q 013955 45 QVHISLAGDSHMRVTWITDDE--SS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDTVYFYRC 119 (433)
Q Consensus 45 qv~l~~~~~~~~~i~W~t~~~--~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t~Y~Y~v 119 (433)
.+.|+. ..+++.|.|..+.. .. .-.|+|...... ....... . . . ....+.|.+|+|||.|.+||
T Consensus 326 ~l~v~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~-w~~~~~~--~---~--~--~~~~~~l~~L~p~t~Y~~qV 394 (419)
T 2gys_A 326 SLQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTAT-WKDSKTE--T---L--Q--NAHSMALPALEPSTRYWARV 394 (419)
T ss_dssp EEEEC----CCCEEEEEC--------CEEEEEEEECSSSC-STTSCEE--E---E--E--SCSEEECCCCCSSCCCEEEE
T ss_pred CeEEEE-eCCeEEEEECCCcccccccceEEEEEEEcCCCC-cceeecc--c---c--c--cccEEEeccCCCCCeEEEEE
Confidence 466554 37899999988732 11 235667765421 1100000 0 0 0 12357899999999999998
Q ss_pred cc
Q 013955 120 GR 121 (433)
Q Consensus 120 ~~ 121 (433)
..
T Consensus 395 Ra 396 (419)
T 2gys_A 395 RV 396 (419)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 217
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=39.25 E-value=60 Score=28.71 Aligned_cols=66 Identities=15% Similarity=0.121 Sum_probs=42.9
Q ss_pred CeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhhhCCCceeccCCCcC
Q 013955 136 PITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLASARPWMVTQGNHEK 207 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~~~iP~~~v~GNHD~ 207 (433)
.++.+..+|+... .....++.+.....|+|++.|.. +-..+.-....+.++. ..+|++.-+||.|.
T Consensus 11 ~w~h~~~~DPdk~-~~~~~l~~~~~~GtDaI~vGgs~---gvt~~~~~~~v~~ik~--~~~Piil~p~~~~~ 76 (235)
T 3w01_A 11 KWRHIFKLDPAKH-ISDDDLDAICMSQTDAIMIGGTD---DVTEDNVIHLMSKIRR--YPLPLVLEISNIES 76 (235)
T ss_dssp TCCEEEEECTTSC-CCHHHHHHHHTSSCSEEEECCSS---CCCHHHHHHHHHHHTT--SCSCEEEECCCSTT
T ss_pred cceEEEeECCCCc-CCHHHHHHHHHcCCCEEEECCcC---CcCHHHHHHHHHHhcC--cCCCEEEecCCHHH
Confidence 4778889998543 23456777888899999999944 1111222233333333 35899999999865
No 218
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=36.56 E-value=81 Score=28.62 Aligned_cols=36 Identities=11% Similarity=0.244 Sum_probs=22.9
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEe
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYG 74 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~ 74 (433)
.+...|..|.+.. ..+++.|.|.-......-.++|.
T Consensus 201 ~p~~~P~~v~~~~-~~~s~~l~W~~p~~~~~~~v~~~ 236 (306)
T 3s98_A 201 NELPPPENIEVSV-QNQNYVLKWDYTYANMTFQVQWL 236 (306)
T ss_dssp CSSCCCEEEEEEE-ETTEEEEEEECSSSSCEEEEEEE
T ss_pred CcCCCCceEEEEE-ecCEEEEEeCCCCCcEEEEEEEe
Confidence 4556788887753 35789999987643222235554
No 219
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=35.86 E-value=1.5e+02 Score=26.54 Aligned_cols=81 Identities=10% Similarity=-0.014 Sum_probs=43.9
Q ss_pred CCCCCCceEEEEecC-CCcEEEEEEcCCCCC---CcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEEEeCCCCCCC
Q 013955 38 KPSSHPQQVHISLAG-DSHMRVTWITDDESS---PSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHTVIGPLEHDT 113 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~-~~~~~i~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~L~p~t 113 (433)
.++..|..+.....+ .+++++.|....... .-.|+|......-... ... ..............+..++|.|.+
T Consensus 97 ~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~L~~~~ 173 (313)
T 2d9q_B 97 YPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQ-GDS--ILDCVPKDGQSHCSIPRKHLLLYQ 173 (313)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSC-CCC--EEEECCCTTCSEEEEEGGGCCSSS
T ss_pred CCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccC-Ccc--cccCCCCCCCcEEEECccccccce
Confidence 355678888755453 689999998764321 2355665443211000 000 000000011234445557799999
Q ss_pred EEEEEecc
Q 013955 114 VYFYRCGR 121 (433)
Q Consensus 114 ~Y~Y~v~~ 121 (433)
.|.++|..
T Consensus 174 ~Y~f~V~A 181 (313)
T 2d9q_B 174 NMGIWVQA 181 (313)
T ss_dssp CEEEEEEE
T ss_pred eEEEEEEE
Confidence 99999865
No 220
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=35.51 E-value=10 Score=32.92 Aligned_cols=65 Identities=11% Similarity=-0.024 Sum_probs=0.0
Q ss_pred CCCceEEEEecCCCcEEEEEEcCCC----------------CCCcEEEEeccCCCCCeeEEeeeeEEeeeeeecCeEEEE
Q 013955 41 SHPQQVHISLAGDSHMRVTWITDDE----------------SSPSVVEYGTSPGGYNCGAEGESTSYRYLFYRSGKIHHT 104 (433)
Q Consensus 41 ~~p~qv~l~~~~~~~~~i~W~t~~~----------------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 104 (433)
..|. |.|...+. ++.|.|.-+.. .-.-.|.|............... ...+
T Consensus 109 ~PP~-v~v~~~~~-si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~~~~------------~~~~ 174 (211)
T 3g9v_A 109 DPPV-MNITQVNG-SLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKEQKVYEGA------------HRAV 174 (211)
T ss_dssp CCCE-EECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------CEEEEEES------------SCCC
T ss_pred CCCE-EEEEEcCC-EEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccEEEEEecC------------CcEE
Q ss_pred EeCCCCCCCEEEEEe
Q 013955 105 VIGPLEHDTVYFYRC 119 (433)
Q Consensus 105 ~l~~L~p~t~Y~Y~v 119 (433)
+|.+|+|+|.|..+|
T Consensus 175 ~i~~L~p~t~Ycv~V 189 (211)
T 3g9v_A 175 EIEALTPHSSYCVVA 189 (211)
T ss_dssp C----------CEEE
T ss_pred EEecCCCCCeEEEEE
No 221
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=33.91 E-value=85 Score=29.82 Aligned_cols=86 Identities=15% Similarity=0.241 Sum_probs=47.2
Q ss_pred CCCCCCceEEEEecCCCcEEEEEEcCCCCCCcEEEEecc-----C--CCCCeeEEeeeeEEeeeeeecCeEEEEEeC-CC
Q 013955 38 KPSSHPQQVHISLAGDSHMRVTWITDDESSPSVVEYGTS-----P--GGYNCGAEGESTSYRYLFYRSGKIHHTVIG-PL 109 (433)
Q Consensus 38 ~~~~~p~qv~l~~~~~~~~~i~W~t~~~~~~~~v~y~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~-~L 109 (433)
.+...|..|.+... .+++++.|.-+.....-.|+|... . +...+.....+ .....+...|+ +|
T Consensus 205 ~~~~~P~~v~~~~~-~~~~~l~W~pp~~~~~Y~v~y~~~~~~~~~~~~~~~w~~~~~~--------~~~~~~~~~~t~~l 275 (414)
T 3se4_A 205 NELPPPENIEVSVQ-NQNYVLKWDYTYANMTFQVQWLHAFLKRNPGNHLYKWKQIPDC--------ENVKTTQCVFPQNV 275 (414)
T ss_dssp CSSCCCEEEEEEEE-TTEEEEEEECSSSSCEEEEEEEESGGGSCCCC--CCCCBCSTT--------TTBSSSEEEEEGGG
T ss_pred cccCCCCccEEEEe-cCCeEEEECCCCCCeEEEEEEEehhccccccccccCceECCCc--------cCCCCCEEcCCccc
Confidence 45567888876643 467999998764333446777753 0 01111100000 00011223344 69
Q ss_pred CCCCEEEEEecc--------cCCeeEEECCC
Q 013955 110 EHDTVYFYRCGR--------QGPEFEFKTPP 132 (433)
Q Consensus 110 ~p~t~Y~Y~v~~--------~s~~~~F~T~p 132 (433)
.+.+.|..||.. ++....|+|..
T Consensus 276 ~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~ 306 (414)
T 3se4_A 276 FQKGIYLLRVQASDGNNTSFWSEEIKFDTEI 306 (414)
T ss_dssp SCSSEEEEEEEEECSSSEEEECCCEEEETTC
T ss_pred ccCccEEEEEEEecCCCcccccccccccchh
Confidence 999999999974 23456777654
No 222
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=31.94 E-value=66 Score=28.30 Aligned_cols=65 Identities=11% Similarity=0.094 Sum_probs=42.7
Q ss_pred CeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh-hCCCceeccCCCcC
Q 013955 136 PITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-SARPWMVTQGNHEK 207 (433)
Q Consensus 136 ~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~-~~iP~~~v~GNHD~ 207 (433)
.++.+..+|+.... ....++.+.....|+|++.|-. +-.. +...+.++.+. ..+|++.-+||++.
T Consensus 6 ~w~h~~~iDPdk~~-~~~~~~~~~~~GtD~i~vGGs~---gvt~---~~~~~~v~~ik~~~~Pvvlfp~~~~~ 71 (228)
T 3vzx_A 6 EWKHVFKLDPNKDL-PDEQLEILCESGTDAVIIGGSD---GVTE---DNVLRMMSKVRRFLVPCVLEVSAIEA 71 (228)
T ss_dssp GCCEEEEECTTSCC-CTTHHHHHHTSSCSEEEECCCS---CCCH---HHHHHHHHHHTTSSSCEEEECSCGGG
T ss_pred ceeEEEeECCCCCC-CHHHHHHHHHcCCCEEEECCcC---CCCH---HHHHHHHHHhhccCCCEEEeCCCHHH
Confidence 57788889985432 2356777888899999999933 1111 22333333332 35999999999865
No 223
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=29.47 E-value=90 Score=28.04 Aligned_cols=43 Identities=9% Similarity=-0.045 Sum_probs=25.9
Q ss_pred EEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCccc
Q 013955 283 LVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (433)
Q Consensus 283 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~ 327 (433)
+++.|||++-.....-.. ..........+.++++ .+++-|+-.
T Consensus 62 lIitHHP~~f~~~~~~~~-~~~~~~~i~~li~~~I-~lya~Ht~l 104 (267)
T 2fyw_A 62 LIIVKHAPIFRPIKDLLA-SRPQNQIYIDLIKHDI-AVYVSHTNI 104 (267)
T ss_dssp EEEESSCSCCSCCCCCCT-TSHHHHHHHHHHHTTC-EEEECSHHH
T ss_pred EEEECCccccCCcccccc-CchHHHHHHHHHHCCC-eEEEeeccc
Confidence 678899886543322111 1234455556777888 667888865
No 224
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=29.31 E-value=82 Score=27.86 Aligned_cols=41 Identities=12% Similarity=0.171 Sum_probs=26.3
Q ss_pred EEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCccc
Q 013955 283 LVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (433)
Q Consensus 283 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~ 327 (433)
+++.|||++- ..... ...........+.++++ .+++-|+-.
T Consensus 60 lIitHHp~~f-~~~~~--~~~~~~~~i~~li~~~I-~ly~~Ht~l 100 (242)
T 2yyb_A 60 FLIVHHGLFW-GKPFP--IVGHHKRRLETLFQGGI-NLYAAHLPL 100 (242)
T ss_dssp EEEEEECSCS-SCCCC--SCHHHHHHHHHHHHTTC-EEEECSHHH
T ss_pred EEEECCCcCc-Ccccc--cccHHHHHHHHHHHCCC-eEEEeccHH
Confidence 6788888865 33222 22344555666777888 668888865
No 225
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=23.98 E-value=1.3e+02 Score=26.48 Aligned_cols=64 Identities=13% Similarity=0.205 Sum_probs=43.7
Q ss_pred CCeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh-hCCCceeccCCC
Q 013955 135 FPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-SARPWMVTQGNH 205 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~-~~iP~~~v~GNH 205 (433)
..++|+..||+... ...+.++.+.+...|+|.+.| . .+. ..+..++.++.+. ..+|++..+++.
T Consensus 7 ~~~~~it~gDP~~~-~t~~~~~~l~~~GaD~IelG~--S--~g~--t~~~~~~~v~~ir~~~~Pivl~~y~~ 71 (234)
T 2f6u_A 7 RKWRHITKLDPDRT-NTDEIIKAVADSGTDAVMISG--T--QNV--TYEKARTLIEKVSQYGLPIVVEPSDP 71 (234)
T ss_dssp GGCCEEEEECTTSC-CCHHHHHHHHTTTCSEEEECC--C--TTC--CHHHHHHHHHHHTTSCCCEEECCSSC
T ss_pred CcceEEEeeCCCcc-ccHHHHHHHHHcCCCEEEECC--C--CCC--CHHHHHHHHHHhcCCCCCEEEecCCc
Confidence 45789999998544 345678888889999999999 2 221 2233444454443 259999988885
No 226
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=21.99 E-value=1.4e+02 Score=27.15 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=24.2
Q ss_pred CCCCCceEEEEecC-CCcEEEEEEcCCCCC--------CcEEEEeccC
Q 013955 39 PSSHPQQVHISLAG-DSHMRVTWITDDESS--------PSVVEYGTSP 77 (433)
Q Consensus 39 ~~~~p~qv~l~~~~-~~~~~i~W~t~~~~~--------~~~v~y~~~~ 77 (433)
.+..|..+.+...+ ++.+.|+|..+.... .-.|+|....
T Consensus 212 kPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~ 259 (306)
T 3d85_D 212 KPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKS 259 (306)
T ss_dssp CCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC-
T ss_pred ecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECC
Confidence 34479999998744 589999999864321 2357776554
No 227
>2nyd_A UPF0135 protein SA1388; hypothetical protein SA1388, selenomethionine SAD, unknown F; 2.00A {Staphylococcus aureus subsp} PDB: 3lnl_A*
Probab=21.36 E-value=1.1e+02 Score=28.92 Aligned_cols=42 Identities=12% Similarity=0.150 Sum_probs=25.0
Q ss_pred EEEecccccCCCCCCCCCChhHHHHHHHHHHHcCCcEEEecCccc
Q 013955 283 LVLLHVPWYNSNEAHQGEGDGMMAIMEPLLYAASVDLVLAGHVHA 327 (433)
Q Consensus 283 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~VdlvlsGH~H~ 327 (433)
+++.|||++-.....-.... . ......+-++++ .+++-|+-.
T Consensus 64 lIItHHPlif~~~k~i~~~~-~-~r~i~~li~~~I-alya~HTnl 105 (370)
T 2nyd_A 64 TIISHHPLIFKGVTSLKANG-Y-GLIIRKLIQHDI-NLIAMHTNL 105 (370)
T ss_dssp EEEESSCSSCSCCSCCCSST-H-HHHHHHHHHTTC-EEEECCHHH
T ss_pred EEEECCCcccCCccccCcCC-H-HHHHHHHHHCCC-eEEEeechh
Confidence 67888887654332221222 2 444555666888 678888864
No 228
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=20.87 E-value=1.4e+02 Score=26.30 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=42.3
Q ss_pred CCeEEEEEecCCCCCChHHHHHHhhcCCCceEEccccccccccchhhHHHhhhhhhhhh-hCCCceeccCCC
Q 013955 135 FPITFAVAGDLGQTGWTKSTLDHIGQCKYDVHLLPGDLSYADYMQHRWDTFGELVQPLA-SARPWMVTQGNH 205 (433)
Q Consensus 135 ~~~~f~~~gD~~~~~~~~~~l~~i~~~~pd~vl~~GD~~~~~~~~~~w~~~~~~~~~l~-~~iP~~~v~GNH 205 (433)
..++|+..||+... ...+.++.+.+...|++...| . .+. ..+..++.++.+. ..+|++..+++.
T Consensus 7 ~~~~~i~~gDP~~~-~t~~~~~~l~~~GaD~ielG~--S--~Gv--t~~~~~~~v~~ir~~~~Pivlm~y~~ 71 (240)
T 1viz_A 7 TEWKHVFKLDPNKD-LPDEQLEILCESGTDAVIIGG--S--DGV--TEDNVLRMMSKVRRFLVPCVLEVSAI 71 (240)
T ss_dssp GGCCEEEEECTTSC-CCHHHHHHHHTSCCSEEEECC----------CHHHHHHHHHHHTTSSSCEEEECSCG
T ss_pred CcceEEEeeCCCcc-ccHHHHHHHHHcCCCEEEECC--C--CCC--CHHHHHHHHHHhhCcCCCEEEecCcc
Confidence 35789999999544 345678888889999999999 2 221 2233344444443 258999888884
No 229
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=20.74 E-value=1.7e+02 Score=26.04 Aligned_cols=28 Identities=4% Similarity=0.157 Sum_probs=12.8
Q ss_pred EEEecC-CCcEEEEEEcCCCCCCcEEEEec
Q 013955 47 HISLAG-DSHMRVTWITDDESSPSVVEYGT 75 (433)
Q Consensus 47 ~l~~~~-~~~~~i~W~t~~~~~~~~v~y~~ 75 (433)
++.+.+ ..+++|.-.-. ...+..|+-+.
T Consensus 36 RvIy~~~~k~~sl~l~N~-~~~P~LvQsWi 64 (257)
T 3q48_A 36 RVVFPASEREVTLRVSNT-SGTPVLAQAWI 64 (257)
T ss_dssp EEEEETTCSEEEEEEEEC-SSSCEEEEEEE
T ss_pred EEEEeCCCcEEEEEEEeC-CCCeEEEEEEE
Confidence 355655 45555544333 23344455433
No 230
>3o81_A Beta-2-microglobulin; IG-like C1-type (immunoglobulin-like) domain, histocompatibi antigen, MHC class I molecule from B21 chicken, immune SYST; 2.00A {Gallus gallus}
Probab=20.60 E-value=2.8e+02 Score=21.14 Aligned_cols=13 Identities=15% Similarity=0.335 Sum_probs=10.2
Q ss_pred CCcEEEEEEcCCC
Q 013955 53 DSHMRVTWITDDE 65 (433)
Q Consensus 53 ~~~~~i~W~t~~~ 65 (433)
+..++|.|.-++.
T Consensus 52 P~~I~v~W~knG~ 64 (119)
T 3o81_A 52 PPKISITLMKDGV 64 (119)
T ss_dssp SSCCEEEEEETTE
T ss_pred CCCcEEEEEECCE
Confidence 6789999987753
Done!