Query 013959
Match_columns 433
No_of_seqs 200 out of 660
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 02:57:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013959.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013959hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e6u_A LANC-like protein 1; al 100.0 8.9E-60 3E-64 475.7 35.7 363 45-433 42-411 (411)
2 2g0d_A Nisin biosynthesis prot 100.0 1.6E-42 5.6E-47 350.5 21.3 328 76-425 28-391 (409)
3 3e6u_A LANC-like protein 1; al 99.9 5.6E-23 1.9E-27 207.0 27.7 272 104-422 48-349 (411)
4 2g0d_A Nisin biosynthesis prot 99.8 7.5E-20 2.6E-24 184.5 15.9 267 124-423 29-340 (409)
5 2zzr_A Unsaturated glucuronyl 97.7 0.0042 1.4E-07 61.3 20.6 234 91-342 76-345 (397)
6 2ahf_A Unsaturated glucuronyl 97.7 0.0036 1.2E-07 61.5 19.9 253 91-356 50-339 (377)
7 2gz6_A N-acetyl-D-glucosamine 97.5 0.005 1.7E-07 60.6 19.1 249 77-388 48-340 (388)
8 3pmm_A Putative cytoplasmic pr 97.5 0.042 1.4E-06 54.0 25.5 288 41-342 21-332 (382)
9 3pmm_A Putative cytoplasmic pr 97.4 0.016 5.6E-07 56.9 20.8 232 134-388 71-333 (382)
10 2ahf_A Unsaturated glucuronyl 97.4 0.0067 2.3E-07 59.5 17.7 150 262-422 105-294 (377)
11 2zzr_A Unsaturated glucuronyl 97.3 0.0065 2.2E-07 60.0 16.2 152 263-422 132-319 (397)
12 3k7x_A LIN0763 protein; Q92DQ0 97.0 0.03 1E-06 54.3 17.7 236 134-387 50-301 (349)
13 1nc5_A Hypothetical protein YT 96.9 0.007 2.4E-07 59.4 12.1 209 191-421 47-291 (373)
14 1nc5_A Hypothetical protein YT 96.6 0.12 4.1E-06 50.5 18.6 267 47-342 13-314 (373)
15 3k11_A Putative glycosyl hydro 96.4 0.48 1.7E-05 47.3 21.7 292 35-341 20-363 (445)
16 3k7x_A LIN0763 protein; Q92DQ0 96.4 0.045 1.5E-06 53.1 13.7 207 187-424 48-284 (349)
17 3gt5_A N-acetylglucosamine 2-e 94.8 0.68 2.3E-05 45.5 15.7 244 87-342 56-345 (402)
18 3k11_A Putative glycosyl hydro 94.8 0.31 1E-05 48.7 12.9 222 188-422 85-341 (445)
19 3gt5_A N-acetylglucosamine 2-e 94.5 0.12 3.9E-06 51.2 9.0 131 253-387 57-208 (402)
20 2gz6_A N-acetyl-D-glucosamine 93.9 0.13 4.5E-06 50.2 8.1 122 263-388 72-208 (388)
21 2zbl_A Putative isomerase; N-a 90.7 2.8 9.4E-05 41.4 13.0 193 186-389 112-353 (421)
22 1fp3_A N-acyl-D-glucosamine 2- 90.2 0.67 2.3E-05 45.4 8.0 74 312-388 255-350 (402)
23 2zbl_A Putative isomerase; N-a 88.6 1.1 3.6E-05 44.4 8.1 120 263-387 68-207 (421)
24 1gxm_A Pectate lyase; mechanis 87.0 2.5 8.6E-05 40.1 9.0 133 249-386 75-248 (332)
25 3e7j_A Heparinase II protein; 78.7 5.8 0.0002 42.2 8.9 211 139-374 88-312 (749)
26 3h7l_A Endoglucanase; dehydrog 78.5 12 0.00041 38.5 10.8 69 42-119 271-339 (586)
27 1r76_A Pectate lyase; A-helica 76.8 11 0.00039 36.7 9.6 135 250-387 151-326 (408)
28 3h7l_A Endoglucanase; dehydrog 74.0 24 0.00081 36.3 11.6 116 265-388 191-339 (586)
29 1dl2_A Class I alpha-1,2-manno 72.8 23 0.00078 35.8 11.0 74 43-117 122-207 (511)
30 1x9d_A Endoplasmic reticulum m 71.4 15 0.00052 37.3 9.3 73 45-118 188-270 (538)
31 1hcu_A Alpha-1,2-mannosidase; 71.2 22 0.00076 35.8 10.5 73 44-117 130-210 (503)
32 2ri9_A Mannosyl-oligosaccharid 69.2 36 0.0012 34.0 11.4 73 44-117 117-196 (475)
33 1fp3_A N-acyl-D-glucosamine 2- 66.9 24 0.00083 34.0 9.6 114 270-388 19-158 (402)
34 1nxc_A Mannosyl-oligosaccharid 66.3 35 0.0012 34.1 10.6 72 45-117 124-207 (478)
35 1w6k_A Lanosterol synthase; cy 61.7 1.6E+02 0.0056 30.9 15.5 92 187-289 534-630 (732)
36 2v8i_A Pectate lyase; periplas 48.7 49 0.0017 32.7 7.8 75 309-388 378-462 (543)
37 3a0o_A Oligo alginate lyase; a 46.2 2.3E+02 0.0079 29.8 13.7 26 138-163 214-239 (776)
38 1gxm_A Pectate lyase; mechanis 46.0 70 0.0024 30.2 8.3 139 186-340 75-247 (332)
39 1nxc_A Mannosyl-oligosaccharid 41.0 26 0.00089 35.0 4.8 73 311-386 112-207 (478)
40 1wzz_A Probable endoglucanase; 41.0 36 0.0012 32.3 5.6 79 305-386 107-202 (334)
41 1v5d_A Chitosanase; chitosan d 37.6 1.8E+02 0.0061 28.0 10.1 119 262-384 89-228 (386)
42 1x9d_A Endoplasmic reticulum m 36.5 31 0.0011 35.0 4.6 73 312-387 177-270 (538)
43 2sqc_A Squalene-hopene cyclase 33.3 1.3E+02 0.0045 31.0 8.9 79 265-359 10-89 (631)
44 1syq_B Talin 1; cytoskeleton, 30.8 30 0.001 18.7 1.8 19 408-426 7-25 (26)
45 1wzz_A Probable endoglucanase; 27.5 62 0.0021 30.6 4.8 41 79-119 102-142 (334)
46 3e7j_A Heparinase II protein; 25.9 1.4E+02 0.0047 31.6 7.5 19 189-207 83-101 (749)
47 1w6k_A Lanosterol synthase; cy 25.5 1.4E+02 0.0047 31.5 7.5 24 266-290 479-502 (732)
48 3qxf_A Endoglucanase; cellulas 25.0 74 0.0025 30.4 4.8 40 80-119 92-131 (355)
49 1t01_B Talin 1; five helix bun 23.7 38 0.0013 18.3 1.4 17 408-424 9-25 (26)
50 2sqc_A Squalene-hopene cyclase 21.9 1.2E+02 0.0042 31.2 6.2 39 247-289 40-79 (631)
51 3gzk_A Cellulase; fold from GH 21.4 6.2E+02 0.021 25.3 11.2 116 264-382 188-334 (537)
52 1kwf_A Endoglucanase A; hydrol 20.7 1.6E+02 0.0054 28.1 6.3 79 305-386 121-214 (363)
53 1ut9_A Cellulose 1,4-beta-cell 20.3 4.6E+02 0.016 26.8 10.1 85 46-133 434-522 (609)
No 1
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=100.00 E-value=8.9e-60 Score=475.68 Aligned_cols=363 Identities=35% Similarity=0.616 Sum_probs=302.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCccccChHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHhccCCC
Q 013959 45 ETFLKAAVSLKDQVVEVTWRRGSGGGGEPGRGMDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVVRDSTR 124 (433)
Q Consensus 45 ~~~l~~A~~i~d~i~~~~~~~~~~~~~~~~~~~~~~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~~i~~~~~~~~~~~~ 124 (433)
++|....++....+++.+-...+ ...|++.++|+|.+||+|||+++++++++++|++.|.++++.+.+.+. ..
T Consensus 42 ~~~~~~~~~~~~~ll~~~~~~~~-----~~~~~~~~lY~G~~Gia~~l~~l~~~t~d~~yl~~a~~~l~~~~~~l~--~~ 114 (411)
T 3e6u_A 42 PEFSQRLTNKIRELLQQMERGLK-----SADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSLNCLT--KR 114 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-----TSCTTCCCSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCC--SC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc-----cCCCCCCCeeeChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc--cc
Confidence 45555555555555554332222 225689999999999999999999999999999999999999887664 34
Q ss_pred cccccCcchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccchHHHHHHHHHHhHhCCC
Q 013959 125 HVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAG 204 (433)
Q Consensus 125 ~~~~~~G~~Gi~~~~~~l~~~~g~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~l~~Ll~l~~~~~~~ 204 (433)
.+++++|.+|+++++..+++.+++++..+++++++.+.. ... .+.++|+++|.||++++|+.+++.++++
T Consensus 115 ~~~~~~G~aG~l~~l~~ly~~~g~~~~a~~~~~~l~~~~---~~~-------~~~~~dll~G~AG~l~aLl~L~~~~~~~ 184 (411)
T 3e6u_A 115 SITFLCGDAGPLAVAAVLYHKMNNEKQAEDCITRLIHLN---KID-------PHAPNEMLYGRIGYIYALLFVNKNFGVE 184 (411)
T ss_dssp CCCTTTSTHHHHHHHHHHHHHTTCHHHHHHHHHHHHGGG---GGC-------TTCCSSTTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCccccCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh---ccc-------ccCChhhhcCcHHHHHHHHHHHHHcCCc
Confidence 689999999999988889999998776677777665542 121 2346899999999999999999999999
Q ss_pred CCchhhHHHHHHHHHhccccccccC---CCCCccccccccccCCCccchhHHHHHHhcCC--C-ChhHHHHHHHHHHHHH
Q 013959 205 TLPNELLMPIVDAVLAGGRAGATAN---TACPLMYRWHGTRYWGAANGLAGILQVLLHFP--L-SEEDAEDVKGTLRYMM 278 (433)
Q Consensus 205 ~~l~~~i~~~~~~ll~~~~~~~~~~---~~~~~~~~~~~~~~~G~aHG~aGI~~~L~~l~--~-~~~~~~~i~~~l~~l~ 278 (433)
.+++..+.++++.+++.++...... ...|++|.|+++.++|||||++||+++|++++ . ++++.+.++++++|++
T Consensus 185 ~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~~~~~~G~aHG~aGI~~~Ll~~~~~~~~~~~~~~i~~~l~~l~ 264 (411)
T 3e6u_A 185 KIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWYQEYYVGAAHGLAGIYYYLMQPSLQVSQGKLHSLVKPSVDYVC 264 (411)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBTTBCBCSTTTSHHHHHHHHTCGGGCCCHHHHHHTHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeecCccCCcccccHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHH
Confidence 8887778889998887664332111 24678999999999999999999999999886 3 3557899999999999
Q ss_pred hccCCCCCCCCCCCCCCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHcCCC-CCCcccccchhH
Q 013959 279 SNRFPQSGNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWKNGLV-KKVGLADGAAGN 357 (433)
Q Consensus 279 ~~~~~~~gnwp~~~~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~~-~~~~LCHG~aG~ 357 (433)
+++.+ +||||+.+++..+.+++||||+|||+++++.+++ +++ ++++.+.++++++.+|++|+. +++|||||.+|+
T Consensus 265 ~~~~~-~g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~g~~~~~~~lChG~aG~ 340 (411)
T 3e6u_A 265 QLKFP-SGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYK--VFR-EEKYLCDAYQCADVIWQYGLLKKGYGLCHGSAGN 340 (411)
T ss_dssp HTCCT-TSCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHH--HHC-CHHHHHHHHHHHHHHHHHCSBTTCSCSTTSHHHH
T ss_pred Hhhcc-CCCCCCCCCcccCccccccCCcHHHHHHHHHHHH--HcC-CHHHHHHHHHHHHHHHhcCccCCCCceecChHHH
Confidence 98887 5899997755556678999999999999999999 998 999999999999999999974 469999999999
Q ss_pred HHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhhhcccCCcCCCCCCCcccccHHHHHHHHHHccCcccCCCCCCCC
Q 013959 358 AYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHTRGADHGYSLFQGLAGTACIWFDLLEPVNARFPGYEL 433 (433)
Q Consensus 358 ~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~gLm~G~aGig~~Llr~~~p~~~~fp~~~~ 433 (433)
+++|+++++.|++++|+++|.+++++++++.. +..+.++.++|||+|+|||+++|+|+++|++++||+|||
T Consensus 341 ~~~ll~~~~~t~~~~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~sL~~G~aGi~~~Ll~l~~p~~~~fp~~~~ 411 (411)
T 3e6u_A 341 AYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE-----HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 411 (411)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHTTTTS-----SCCCCCSSTTSTTTSHHHHHHHHHHHTSGGGCCCTTTCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc-----ccCCCCCCCChhhccHHHHHHHHHHHcCCCcccCCCCCC
Confidence 99999999999999999999999998876432 123456778999999999999999999999999999997
No 2
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=100.00 E-value=1.6e-42 Score=350.53 Aligned_cols=328 Identities=16% Similarity=0.138 Sum_probs=234.3
Q ss_pred CCCCccccChHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHhcc-CCCcccccCcchHHHHHHHHHHHHhC-ChhHHH
Q 013959 76 GMDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVVRD-STRHVTFLCGRGGIYAIGAVVANRMG-DRSRRD 153 (433)
Q Consensus 76 ~~~~~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~~i~~~~~~~~~-~~~~~~~~~G~~Gi~~~~~~l~~~~g-~~~~~~ 153 (433)
+.+.+||+|.+||++||+++++++++++|.+.++++++.+.+.+.. .....|+|+|.+|+++++..+++..+ .++.++
T Consensus 28 ~~~~sLy~G~aGial~l~~l~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~gl~~G~aGi~~~l~~l~~~~~~~~~~l~ 107 (409)
T 2g0d_A 28 FGELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLSTYGLLTGSLYSGAAGIALSILHLREDDEKYKNLLD 107 (409)
T ss_dssp GGGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHHHCCSCCCTTTSHHHHHHHHGGGTTTCHHHHHHHH
T ss_pred CCCCchhccHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHhCCCCCCcccccHHHHHHHHHHHHhccchHHHHHH
Confidence 5789999999999999999999999999999999999988876542 23457999999999776544433221 111222
Q ss_pred HHHHHHHHHHHhc--cCCCCCCCCCCCCCccccccchHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCC
Q 013959 154 FFLNLFLEIAQER--ALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTA 231 (433)
Q Consensus 154 ~~~~~i~~~~~~~--~l~~~~~~~~~~~~~D~l~G~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~ 231 (433)
...+.+...+.+. .....+. ....+|+++|.||++++|+.++ ++.. .+.+.++++++++..+. . ..
T Consensus 108 ~~~~~~~~~~~~~l~~~~~~~~---~~~~~dl~~G~aGi~~~Ll~l~----~~~~-~~~~~~~~~~l~~~~~~---~-~~ 175 (409)
T 2g0d_A 108 SLNRYIEYFVREKIEGFNLENI---TPPDYDVIEGLSGILSYLLLIN----DEQY-DDLKILIINFLSNLTKE---N-NG 175 (409)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGC---CHHHHSSSSSHHHHHHHHTTCC----CGGG-HHHHHHHHHHHHHTTSC---C-SS
T ss_pred HHHHHHHHHHHHHHHHhhhccC---CcccccHhcCHHHHHHHHHHcc----Cchh-HHHHHHHHHHHHHHHhc---C-CC
Confidence 2222221111000 1110000 1246899999999999999875 2222 34677888888875321 0 01
Q ss_pred CCccccc--------------cccccCCCccchhHHHHHHhcCC---C-ChhHHHHHHHHHHHHHhccCC-CCCC-CCC-
Q 013959 232 CPLMYRW--------------HGTRYWGAANGLAGILQVLLHFP---L-SEEDAEDVKGTLRYMMSNRFP-QSGN-YPV- 290 (433)
Q Consensus 232 ~~~~~~~--------------~~~~~~G~aHG~aGI~~~L~~l~---~-~~~~~~~i~~~l~~l~~~~~~-~~gn-wp~- 290 (433)
.+.+|.. ++..++|||||++||+++|+.++ . ++++.+.++++++|+.+.... ..|+ ||+
T Consensus 176 ~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g 255 (409)
T 2g0d_A 176 LISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDG 255 (409)
T ss_dssp SCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSE
T ss_pred CCceeecCCccccchhhhcCCCCCccCCchhhHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCc
Confidence 1111110 13468999999999998887764 2 677899999999999775442 4677 998
Q ss_pred CCC----------CCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHc-CCCCCCcccccchhHHH
Q 013959 291 SEG----------NPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWKN-GLVKKVGLADGAAGNAY 359 (433)
Q Consensus 291 ~~~----------~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~-g~~~~~~LCHG~aG~~~ 359 (433)
... +....+++||||+|||+++++.+++ .++ ++++++.++++++.+|++ +..++++||||.+|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~--~~~-d~~~~~~a~~~~~~~~~~~~~~~~~~LCHG~aG~~~ 332 (409)
T 2g0d_A 256 LVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGL--ALD-NDYFVDKAEKILESAMQRKLGIDSYMICHGYSGLIE 332 (409)
T ss_dssp ECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHH--HTT-CHHHHHHHHHHHHHHHHHCTTCCSCCTTTSHHHHHH
T ss_pred cccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHH--HcC-CHHHHHHHHHHHHHHHHhccCCCCCCCCChHHHHHH
Confidence 211 1233578999999999999999999 999 999999999999999987 44556999999999999
Q ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHhhhhhhcccCCcCCCCCCCcccccHHHHHHHHHHccCccc
Q 013959 360 AFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHTRGADHGYSLFQGLAGTACIWFDLLEPVN 425 (433)
Q Consensus 360 ~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~~~~~~~gLm~G~aGig~~Llr~~~p~~ 425 (433)
+|+.+++.+++++|.++|.++. +. ....+ |. +....++|||+|.|||+++|+++..|.+
T Consensus 333 ~l~~l~~~~~~~~~~~~a~~~~-~~--~~~~~---g~-~~~~~~~gL~~G~AGi~~~Ll~l~~p~~ 391 (409)
T 2g0d_A 333 ICSLFKRLLNTKKFDSYMEEFN-VN--SEQIL---EE-YGDESGTGFLEGISGCILVLSKFEYSIN 391 (409)
T ss_dssp HHHHHHHHHCCCTTHHHHHHHH-HT--HHHHH---HS-CCSTTCSSTTTSHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHcC-Cc--chhhc---cc-cCCCCCCceeCCHHHHHHHHHHhcCCCC
Confidence 9999999999999999888742 11 11100 11 2233456999999999999999999987
No 3
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=99.92 E-value=5.6e-23 Score=206.99 Aligned_cols=272 Identities=17% Similarity=0.191 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHhcc-CCCcccccCcchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHhccCCCCCCCCCCCCCcc
Q 013959 104 ELLLSAEIIDTCASVVRD-STRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYD 182 (433)
Q Consensus 104 y~~~a~~~i~~~~~~~~~-~~~~~~~~~G~~Gi~~~~~~l~~~~g~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~D 182 (433)
....++++++.+.+.++. .+.+.++|+|.+|+++++..+++.++++++.+.+.+.+.... + .++ +...+
T Consensus 48 ~~~~~~~ll~~~~~~~~~~~~~~~~lY~G~~Gia~~l~~l~~~t~d~~yl~~a~~~l~~~~-~-~l~--------~~~~~ 117 (411)
T 3e6u_A 48 LTNKIRELLQQMERGLKSADPRDGTGYTGWAGIAVLYLHLYDVFGDPAYLQLAHGYVKQSL-N-CLT--------KRSIT 117 (411)
T ss_dssp HHHHHHHHHHHHHHHTTTSCTTCCCSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-T-TCC--------SCCCC
T ss_pred HHHHHHHHHHHHHhhcccCCCCCCCeeeChHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-H-Hhc--------ccCCc
Confidence 344455555555544432 245689999999998888888999999877766655554443 1 232 24678
Q ss_pred ccccchHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCCccccccccccCCCccchhHHHHHHhcCC-
Q 013959 183 LLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFP- 261 (433)
Q Consensus 183 ~l~G~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGI~~~L~~l~- 261 (433)
++.|.+|++++++.+|+.++++ ....++++++++.... . ......+-||.||++++|+.++
T Consensus 118 ~~~G~aG~l~~l~~ly~~~g~~----~~a~~~~~~l~~~~~~-~-------------~~~~~dll~G~AG~l~aLl~L~~ 179 (411)
T 3e6u_A 118 FLCGDAGPLAVAAVLYHKMNNE----KQAEDCITRLIHLNKI-D-------------PHAPNEMLYGRIGYIYALLFVNK 179 (411)
T ss_dssp TTTSTHHHHHHHHHHHHHTTCH----HHHHHHHHHHHGGGGG-C-------------TTCCSSTTTSHHHHHHHHHHHHH
T ss_pred cccCcHHHHHHHHHHHHHhCCH----HHHHHHHHHHHHHhcc-c-------------ccCChhhhcCcHHHHHHHHHHHH
Confidence 9999999999999999998874 2456667766654311 0 0112578899999999998774
Q ss_pred -C-Chh-----HHHHHHHHHHHHHhc---c-----CCCCCCCCCCCCCCCCcccccccCChhHHHHHHHHhcCCCCCCcH
Q 013959 262 -L-SEE-----DAEDVKGTLRYMMSN---R-----FPQSGNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVSVFPSDR 326 (433)
Q Consensus 262 -~-~~~-----~~~~i~~~l~~l~~~---~-----~~~~gnwp~~~~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~ 326 (433)
. ++. ..+.++..++..... . .|-.-.|. .....+||||.+||+.+++.+.+ .++ ++
T Consensus 180 ~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~~~pl~~~w~------~~~~~G~aHG~aGI~~~Ll~~~~--~~~-~~ 250 (411)
T 3e6u_A 180 NFGVEKIPQSHIQQICETILTSGENLARKRNFTAKSPLMYEWY------QEYYVGAAHGLAGIYYYLMQPSL--QVS-QG 250 (411)
T ss_dssp HHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTTTCSCCCCBT------TBCBCSTTTSHHHHHHHHTCGGG--CCC-HH
T ss_pred HcCCccchHHHHHHHHHHHHHHHHHHHHhccccCCCCcceeec------CccCCcccccHHHHHHHHHHHHh--hcC-hH
Confidence 1 211 123344444443221 0 11001342 23457999999999999999998 888 89
Q ss_pred HHHHHHHHHHHHHHHcCCCC-------------CCcccccchhHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhhhcc
Q 013959 327 EFRDAAIEAGEVLWKNGLVK-------------KVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVT 393 (433)
Q Consensus 327 ~~~~~a~~a~~~~~~~g~~~-------------~~~LCHG~aG~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~ 393 (433)
++.+.+.++++...+..... -+++|||.+|++.+++.+++.++++++++.|.+.++.+.+..
T Consensus 251 ~~~~~i~~~l~~l~~~~~~~g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~g----- 325 (411)
T 3e6u_A 251 KLHSLVKPSVDYVCQLKFPSGNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADVIWQYG----- 325 (411)
T ss_dssp HHHHTHHHHHHHHHHTCCTTSCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcC-----
Confidence 99999999998876643211 137999999999999999999999999999988776554321
Q ss_pred cCCcCCCCCCCcccccHHHHHHHHHHccC
Q 013959 394 SGHTRGADHGYSLFQGLAGTACIWFDLLE 422 (433)
Q Consensus 394 ~g~~~~~~~~~gLm~G~aGig~~Llr~~~ 422 (433)
- ...++|||.|.||+++.+++++.
T Consensus 326 --~---~~~~~~lChG~aG~~~~ll~~~~ 349 (411)
T 3e6u_A 326 --L---LKKGYGLCHGSAGNAYAFLTLYN 349 (411)
T ss_dssp --S---BTTCSCSTTSHHHHHHHHHHHHH
T ss_pred --c---cCCCCceecChHHHHHHHHHHHH
Confidence 1 13458999999999999999764
No 4
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=99.82 E-value=7.5e-20 Score=184.46 Aligned_cols=267 Identities=15% Similarity=0.086 Sum_probs=174.2
Q ss_pred CcccccCcchHHHHHHHHHHHHhCChhHHH---HHHHHHHHHHHhccCCCCCCCCCCCCCccccccchHHHHHHHHHHhH
Q 013959 124 RHVTFLCGRGGIYAIGAVVANRMGDRSRRD---FFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKH 200 (433)
Q Consensus 124 ~~~~~~~G~~Gi~~~~~~l~~~~g~~~~~~---~~~~~i~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~l~~Ll~l~~~ 200 (433)
...+++.|.+||++++..+++.++++++.+ ++++.+.+.+.. .. .....++.|.+|+++++..+.+.
T Consensus 29 ~~~sLy~G~aGial~l~~l~~~~~~~~~~~~a~~~l~~~~~~~~~--~~--------~~~~gl~~G~aGi~~~l~~l~~~ 98 (409)
T 2g0d_A 29 GELTLSTGLPGIILMLAELKNKDNSKIYQKKIDNYIEYIVSKLST--YG--------LLTGSLYSGAAGIALSILHLRED 98 (409)
T ss_dssp GGGSTTTSHHHHHHHHHTTTTSTTHHHHHHHHHHHHHHHHHHHHH--HC--------CSCCCTTTSHHHHHHHHGGGTTT
T ss_pred CCCchhccHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHh--CC--------CCCCcccccHHHHHHHHHHHHhc
Confidence 358899999999887777777777654433 344444333211 00 13467899999999998876543
Q ss_pred hCCCCCchhhHHHHHHHHHhccc-cccccCCCCCccccccccccCCCccchhHHHHHHhcCCCChhHHHHHHHHHHHHHh
Q 013959 201 LGAGTLPNELLMPIVDAVLAGGR-AGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFPLSEEDAEDVKGTLRYMMS 279 (433)
Q Consensus 201 ~~~~~~l~~~i~~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~G~aHG~aGI~~~L~~l~~~~~~~~~i~~~l~~l~~ 279 (433)
.++. +..+.++.+.+..... ..... ...++ .....++.||.+||+++|+.++ ++...+.++++++++.+
T Consensus 99 ~~~~---~~~l~~~~~~~~~~~~~~l~~~-~~~~~-----~~~~~dl~~G~aGi~~~Ll~l~-~~~~~~~~~~~~~~l~~ 168 (409)
T 2g0d_A 99 DEKY---KNLLDSLNRYIEYFVREKIEGF-NLENI-----TPPDYDVIEGLSGILSYLLLIN-DEQYDDLKILIINFLSN 168 (409)
T ss_dssp CHHH---HHHHHHHHHHHHHHHHHHHHTC-CGGGC-----CHHHHSSSSSHHHHHHHHTTCC-CGGGHHHHHHHHHHHHH
T ss_pred cchH---HHHHHHHHHHHHHHHHHHHHHh-hhccC-----CcccccHhcCHHHHHHHHHHcc-CchhHHHHHHHHHHHHH
Confidence 2210 1122222222211000 00000 00000 1234689999999999999886 55567788888888877
Q ss_pred ccCC-CC-CCCCCCCCC-----------CCCcccccccCChhHHHHHHHHhcCCCC-CCcHHHHHHHHHHHHHHHHc---
Q 013959 280 NRFP-QS-GNYPVSEGN-----------PRDKLVQWSHGATGVAITLCKASQVSVF-PSDREFRDAAIEAGEVLWKN--- 342 (433)
Q Consensus 280 ~~~~-~~-gnwp~~~~~-----------~~~~~~~WChG~~Gi~l~~l~~~~~~~~-~~~~~~~~~a~~a~~~~~~~--- 342 (433)
.... .. .+|+....+ .......||||.+||+..+..+++ .. . ++.+.+.+.++++...+.
T Consensus 169 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGi~~~L~~~~~--~~~~-~~~~~~~~~~~~~~l~~~~~~ 245 (409)
T 2g0d_A 169 LTKENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAGVGCILAYAHI--KGYS-NEASLSALQKIIFIYEKFELE 245 (409)
T ss_dssp TTSCCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHHHHHHHHHHHH--HTCC-CHHHHHHHHHHHHHHHHHCCC
T ss_pred HHhcCCCCCceeecCCccccchhhhcCCCCCccCCchhhHHHHHHHHHHHHH--hCCC-ChhHHHHHHHHHHHHHHHHhc
Confidence 5432 11 246432211 012457999999999988877776 43 4 788989888888765221
Q ss_pred ---CC--------------------C-CCCcccccchhHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhhhcccCCcC
Q 013959 343 ---GL--------------------V-KKVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHTR 398 (433)
Q Consensus 343 ---g~--------------------~-~~~~LCHG~aG~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~ 398 (433)
|. . ..+++|||.+|++.+++.+++.++|++|.+.|.+.++.+++..
T Consensus 246 ~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~d~~~~~~a~~~~~~~~~~~---------- 315 (409)
T 2g0d_A 246 RKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALDNDYFVDKAEKILESAMQRK---------- 315 (409)
T ss_dssp GGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC----------
T ss_pred CCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc----------
Confidence 11 0 1379999999999999999999999999999998888776541
Q ss_pred CCCCCCcccccHHHHHHHHHHccCc
Q 013959 399 GADHGYSLFQGLAGTACIWFDLLEP 423 (433)
Q Consensus 399 ~~~~~~gLm~G~aGig~~Llr~~~p 423 (433)
.....+||+.|.||+++.|+++...
T Consensus 316 ~~~~~~~LCHG~aG~~~~l~~l~~~ 340 (409)
T 2g0d_A 316 LGIDSYMICHGYSGLIEICSLFKRL 340 (409)
T ss_dssp TTCCSCCTTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCChHHHHHHHHHHHHHH
Confidence 1234689999999999999997653
No 5
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.68 E-value=0.0042 Score=61.32 Aligned_cols=234 Identities=10% Similarity=0.065 Sum_probs=134.2
Q ss_pred HHHHHhhhhCChHHHHHHHHHHHHHHHHhcc----CCCcccccCcchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHhc
Q 013959 91 ICLRSYELTGNQQELLLSAEIIDTCASVVRD----STRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQER 166 (433)
Q Consensus 91 ~l~~L~~~t~~~~y~~~a~~~i~~~~~~~~~----~~~~~~~~~G~~Gi~~~~~~l~~~~g~~~~~~~~~~~i~~~~~~~ 166 (433)
.+..+|+.|+|++|++.|.+..+.+...+.. ...+.||....+ +...++.+|++++.+.++.....++...
T Consensus 76 ~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~~~~~HD~GF~~~~s-----~~~~y~ltg~~~~~~~~~~aA~~L~~r~ 150 (397)
T 2zzr_A 76 CLWLAYEYNQDKKLKNIAHKNVLSFLNRINNRIALDHHDLGFLYTPS-----CTAEYRINGDVKALEATIKAADKLMERY 150 (397)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTCSCCSSTHHHHHTTT-----HHHHHHHHCCHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHhhhhcccCCCCCchHHHHHH-----HHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 3456777899999999999888776654421 112344433322 2235788999887666655555554221
Q ss_pred cCCCCCCCCCCC-----CCccccccchHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCCcccccc--
Q 013959 167 ALPAGPEEGGFG-----MSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWH-- 239 (433)
Q Consensus 167 ~l~~~~~~~~~~-----~~~D~l~G~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~-- 239 (433)
....+... .|+ .++-++--+.=-+.+|...++.++++++++ .+.+.++.+++.-.. .+ + .+...+.
T Consensus 151 ~~~~g~iq-sw~~~~~~~~~~~iID~~mni~~L~~A~~~~gd~~y~~-~A~~ha~~~l~~~~r--~d--g-s~~h~~~~d 223 (397)
T 2zzr_A 151 QEKGGFIQ-AWGELGYKEHYRLIIDCLLNIQLLFFAYEQTGDEKYRQ-VAVNHFYASANNVVR--DD--S-SAFHTFYFD 223 (397)
T ss_dssp ETTTTEEC-CSSSTTCGGGCEEETTHHHHTHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHTBC--TT--S-CBCSEEEEC
T ss_pred CcCCCEEE-ecccCCCCCCCceeechHhHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHhCcC--CC--C-CeEEEEEee
Confidence 11111110 011 112222222224556777778899887754 455556666653211 00 0 0111111
Q ss_pred ---ccc-----c------CCCccchhHHHHHHhcCC---CChhHHHHHHHHHHHHHhccCCCCC--CCCCCCCCC-CCcc
Q 013959 240 ---GTR-----Y------WGAANGLAGILQVLLHFP---LSEEDAEDVKGTLRYMMSNRFPQSG--NYPVSEGNP-RDKL 299 (433)
Q Consensus 240 ---~~~-----~------~G~aHG~aGI~~~L~~l~---~~~~~~~~i~~~l~~l~~~~~~~~g--nwp~~~~~~-~~~~ 299 (433)
|.. . ..||.|.|-.+++++.++ .++++++.+++..++.++.. |+++ .|-...+.. ....
T Consensus 224 ~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~-~~d~~pywdt~~~~~~~~~~ 302 (397)
T 2zzr_A 224 PETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRL-PEDKVSYWDLIFTDGSGQPR 302 (397)
T ss_dssp TTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTC-CTTSCCBSBTTCCTTSCCCB
T ss_pred CCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh-HHhCCccccCCCCCCCCCcC
Confidence 110 1 246778899999888876 37889999999999988865 5333 563222111 0111
Q ss_pred cccccCChhHHHHHHHHhcCCCCCCc---HH--HHHHHHHHHHHHHHc
Q 013959 300 VQWSHGATGVAITLCKASQVSVFPSD---RE--FRDAAIEAGEVLWKN 342 (433)
Q Consensus 300 ~~WChG~~Gi~l~~l~~~~~~~~~~~---~~--~~~~a~~a~~~~~~~ 342 (433)
. =.|++.++..++.+++ .++ + ++ |.+.|+++++.+...
T Consensus 303 D--~Sa~aiaA~~Ll~L~~--~~~-~~~~~~~~Y~~~A~~~l~~l~~~ 345 (397)
T 2zzr_A 303 D--TSATATAVCGIHEMLK--YLP-EVDPDKETYKYAMHTMLRSLIEQ 345 (397)
T ss_dssp C--HHHHHHHHHHHHHHHT--TSC-TTCTTHHHHHHHHHHHHHHHHHH
T ss_pred C--CCHHHHHHHHHHHHHH--hcC-ccchhhHHHHHHHHHHHHHHHHH
Confidence 1 3566777788889988 776 4 66 999999988876654
No 6
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.67 E-value=0.0036 Score=61.51 Aligned_cols=253 Identities=14% Similarity=0.028 Sum_probs=140.5
Q ss_pred HHHHHhhhhCChHHHHHHHHHHHHHHHHhccC----CCcccccCcchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHhc
Q 013959 91 ICLRSYELTGNQQELLLSAEIIDTCASVVRDS----TRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQER 166 (433)
Q Consensus 91 ~l~~L~~~t~~~~y~~~a~~~i~~~~~~~~~~----~~~~~~~~G~~Gi~~~~~~l~~~~g~~~~~~~~~~~i~~~~~~~ 166 (433)
.+..+|+.|+|++|++.|.+..+.+...+... ..+.||+... .+...++.+|++++.+.++.....++..
T Consensus 50 ~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~~~~~~~HD~Gf~~~~-----s~~~~y~ltg~~~~~~~~~~aA~~L~~r- 123 (377)
T 2ahf_A 50 ILWLCYEYTGDEQYREGAVRTVASFRERLDRFENLDHHNIGFLYSL-----SAKAQWIVEKDESARKLALDAADVLMRR- 123 (377)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTTTTTCCBSTHHHHHHT-----THHHHHHHHCCHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhhhcccCCCCCCchHhhHH-----HHHHHHHHhCCHHHHHHHHHHHHHHHHh-
Confidence 35567778999999999998877776544211 1123332211 1233578899988766666555555422
Q ss_pred cCCC-CCCCCCCC----C--CccccccchHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhcccccccc--C-------C
Q 013959 167 ALPA-GPEEGGFG----M--SYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATA--N-------T 230 (433)
Q Consensus 167 ~l~~-~~~~~~~~----~--~~D~l~G~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~--~-------~ 230 (433)
..+. +... .++ . ..-++-=+--.|.+|...++.++++++++ .+.+.++.+++.-.+-... + +
T Consensus 124 ~~~~~g~i~-sw~~~~~~~~~~~~iID~mmni~~L~~A~~~~gd~~y~~-~A~~~a~~~l~~~~r~dgs~~h~~~~D~~t 201 (377)
T 2ahf_A 124 WRADAGIIQ-AWGPKGDPENGGRIIIDCLLNLPLLLWAGEQTGDPEYRR-VAEAHALKSRRFLVRGDDSSYHTFYFDPEN 201 (377)
T ss_dssp EETTTTEEC-CBSSTTCTTTTTEEEGGGGGGHHHHHHHHHHHCCTHHHH-HHHHHHHHHHHHTBBTTSCBCSEEEECTTT
T ss_pred CCCCCCeEE-eccCCCCCCCCceEEechHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHhCcCCCCCeEEEEEeeCCC
Confidence 1111 1111 011 1 11222222222667888889999988754 5555566666532110000 0 0
Q ss_pred CCCc-ccccccc-ccCCCccchhHHHHHHhcCC---CChhHHHHHHHHHHHHHhccCCCCC--CCCCCCCCC-CCccccc
Q 013959 231 ACPL-MYRWHGT-RYWGAANGLAGILQVLLHFP---LSEEDAEDVKGTLRYMMSNRFPQSG--NYPVSEGNP-RDKLVQW 302 (433)
Q Consensus 231 ~~~~-~~~~~~~-~~~G~aHG~aGI~~~L~~l~---~~~~~~~~i~~~l~~l~~~~~~~~g--nwp~~~~~~-~~~~~~W 302 (433)
+.+. .|...+- ....||.|.|-.++++..++ .++++++.+++..++.++.+ |+++ .|-...+.. .... -
T Consensus 202 G~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~-~~d~~pywd~~~~~~~~~~~--d 278 (377)
T 2ahf_A 202 GNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLARV-PEDGVVYWDFEVPQEPSSYR--D 278 (377)
T ss_dssp CCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC-CTTSSCBSBTTSCCCTTSCB--C
T ss_pred CCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHhh-HHhCCcccccCCCccCCCcc--C
Confidence 0000 0000010 12456888899999888876 37889999999999998876 5444 352211111 0111 1
Q ss_pred ccCChhHHHHHHHHhcCCCCC----CcHHHHHHHHHHHHHHHHcCCC-----CCCcccccchh
Q 013959 303 SHGATGVAITLCKASQVSVFP----SDREFRDAAIEAGEVLWKNGLV-----KKVGLADGAAG 356 (433)
Q Consensus 303 ChG~~Gi~l~~l~~~~~~~~~----~~~~~~~~a~~a~~~~~~~g~~-----~~~~LCHG~aG 356 (433)
=.++++++..++.+.+ .++ .+++|.+.|+++++.+.+.=+. .+.-|-||..+
T Consensus 279 ~Sa~aiaA~~Ll~L~~--~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~~~~~g~L~h~~~~ 339 (377)
T 2ahf_A 279 SSASAITACGLLEIAS--QLDESDPERQRFIDAAKTTVTALRDGYAERDDGEAEGFIRRGSYH 339 (377)
T ss_dssp HHHHHHHHHHHHHHHH--TSCTTCHHHHHHHHHHHHHHHHHHHHTBCCCCSSCCCSBSCBCSB
T ss_pred CCHHHHHHHHHHHHHH--hcCccccchHHHHHHHHHHHHHHHHHHhcCCCCCCCeEEeccccc
Confidence 2456778888999988 762 1567999999988877553211 12446666554
No 7
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.54 E-value=0.005 Score=60.57 Aligned_cols=249 Identities=14% Similarity=0.061 Sum_probs=145.2
Q ss_pred CCCccccChHHHHHHHHHHhhh-hCChHHHHHHHHHHHHHHHHhccCCCcccccCcchHHHHHHHHHHHHhCChhHHHHH
Q 013959 77 MDPTLYTGLLGTAFICLRSYEL-TGNQQELLLSAEIIDTCASVVRDSTRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFF 155 (433)
Q Consensus 77 ~~~~LY~G~~Gial~l~~L~~~-t~~~~y~~~a~~~i~~~~~~~~~~~~~~~~~~G~~Gi~~~~~~l~~~~g~~~~~~~~ 155 (433)
....+|. .+=++.+|+.++++ ++++.|++.|.+.++.+.+.... + ..+++.-.. .-|.+
T Consensus 48 ~eK~l~~-nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~-~-~Gg~~~~~d-----------~dg~~------ 107 (388)
T 2gz6_A 48 TDKFIWL-QNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRD-D-EGNWYFALT-----------RGGEP------ 107 (388)
T ss_dssp CCEEHHH-HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBC-T-TSCBCSEEC-----------TTSCB------
T ss_pred cchhHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCC-C-CCCEEEEEc-----------CCCCc------
Confidence 3455664 55667778999998 89999999999999988876532 1 123332110 00110
Q ss_pred HHHHHHHHHhccCCCCCCCCCCCCCccccccchHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCCcc
Q 013959 156 LNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLM 235 (433)
Q Consensus 156 ~~~i~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~ 235 (433)
+. ..-.+.+.+=++.++..+|+.++++.+++ .+.++.+.+++.-. +. . . .
T Consensus 108 ------------~~----------~~~~~~~~af~i~al~~~y~~tg~~~~l~-~A~~~~~~i~~~~~---d~-~--g-~ 157 (388)
T 2gz6_A 108 ------------LV----------QPYNIFSDCFAAMAFSQYALASGEEWAKD-VAMQAYNNVLRRKD---NP-K--G-K 157 (388)
T ss_dssp ------------CC----------CCCCHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHTC--------------
T ss_pred ------------cc----------CCcchHHHHHHHHHHHHHHHHhCCHHHHH-HHHHHHHHHHHHhc---CC-C--c-c
Confidence 00 01123345557778888899999876653 55666776665321 10 0 0 1
Q ss_pred cc--ccc-cccCCCccchhH--H-HHHHhcCC-C--ChhHHHHHHHHHHHHHhcc-CCCCCC--------CCCCCCCCCC
Q 013959 236 YR--WHG-TRYWGAANGLAG--I-LQVLLHFP-L--SEEDAEDVKGTLRYMMSNR-FPQSGN--------YPVSEGNPRD 297 (433)
Q Consensus 236 ~~--~~~-~~~~G~aHG~aG--I-~~~L~~l~-~--~~~~~~~i~~~l~~l~~~~-~~~~gn--------wp~~~~~~~~ 297 (433)
|. +.+ .... |.++ + +.+|+.++ + ++++++.+++.++.+...+ .++.|. |... +....
T Consensus 158 ~~~~~~~~~~~~----~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~-~~~~~ 232 (388)
T 2gz6_A 158 YTKTYPGTRPMK----ALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHI-DCFEG 232 (388)
T ss_dssp -------CCCCE----ETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCC-CSTTT
T ss_pred cCcccCCCCCCC----CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCC-CCccc
Confidence 11 111 1122 2222 2 23566665 2 4567888999998887643 222332 2110 00000
Q ss_pred cccccccCChh----HHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHcCCCCC-Ccccccc------------------
Q 013959 298 KLVQWSHGATG----VAITLCKASQVSVFPSDREFRDAAIEAGEVLWKNGLVKK-VGLADGA------------------ 354 (433)
Q Consensus 298 ~~~~WChG~~G----i~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~~~~-~~LCHG~------------------ 354 (433)
.. =.|| .+..++.+++ +++ ++++.+.|++.++..++.|+... .++||..
T Consensus 233 ~~-----~~pgh~~e~a~lL~~~~~--~tg-d~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~~~g~~~~~~~~~~~~~W 304 (388)
T 2gz6_A 233 RL-----INPGHGIEAMWFIMDIAR--RKN-DSKTINQAVDVVLNILNFAWDNEYGGLYYFMDAAGHPPQQLEWDQKLWW 304 (388)
T ss_dssp TE-----ECHHHHHHHHHHHHHHHH--HTT-CHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEETTSCCCSCTTTTCEEHH
T ss_pred Cc-----CCCCHHHHHHHHHHHHHH--HcC-CHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcH
Confidence 11 2344 3335667778 888 99999999999988888776433 4555421
Q ss_pred --hhHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhh
Q 013959 355 --AGNAYAFLSLYRLTGETIYVERANAFSSFLYHNA 388 (433)
Q Consensus 355 --aG~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~ 388 (433)
+=.+..++.+|+.|++++|.+.+.++.+++....
T Consensus 305 ~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~~ 340 (388)
T 2gz6_A 305 VHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQHF 340 (388)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 1135557788999999999999999998876643
No 8
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.53 E-value=0.042 Score=54.00 Aligned_cols=288 Identities=13% Similarity=0.015 Sum_probs=147.8
Q ss_pred CCChHHHHHHHHHHHHHHHHhhhc-CCCCCCCCCCCCCCCccccC---hHHHH-HHHHHHhhhhCChHHHHHHHHHHHHH
Q 013959 41 SLPCETFLKAAVSLKDQVVEVTWR-RGSGGGGEPGRGMDPTLYTG---LLGTA-FICLRSYELTGNQQELLLSAEIIDTC 115 (433)
Q Consensus 41 ~~~~~~~l~~A~~i~d~i~~~~~~-~~~~~~~~~~~~~~~~LY~G---~~Gia-l~l~~L~~~t~~~~y~~~a~~~i~~~ 115 (433)
.++++++.+.-.++.+.+++.--. +............+.-.+.. ..|+. ..+.++|++|+|++|++.+.+.++..
T Consensus 21 ~~~~~~~~~~l~~~~~~l~~~~~~~~~f~~~~~~~~~~d~k~~~~W~Wt~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~ 100 (382)
T 3pmm_A 21 FIARSELQALIRNVTQNLVNIKDESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQTGDIEMRDIIDRWFADR 100 (382)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCCCTTCTTCEECTTSCEECSSSTTSCSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhccCccccccccCCccccccCCCCcCccccHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 456777777777777777553100 00000000000011112222 22443 44678889999999999999988866
Q ss_pred HHHhccCCCcccccCcchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHhc-cCCCCCCCCC---CCCC-ccccccchHH
Q 013959 116 ASVVRDSTRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQER-ALPAGPEEGG---FGMS-YDLLYGRAGF 190 (433)
Q Consensus 116 ~~~~~~~~~~~~~~~G~~Gi~~~~~~l~~~~g~~~~~~~~~~~i~~~~~~~-~l~~~~~~~~---~~~~-~D~l~G~aG~ 190 (433)
...- ....+.. .+..+. . +..+++.+|++++++.+......+.... ..+.|..... +..+ .-++.|.--.
T Consensus 101 ~~~~-~~~~n~D--~~~~~~-~-l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~WiDgl~M~ 175 (382)
T 3pmm_A 101 FAEG-ATTKNVN--TMAPFL-T-LAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMWDDTLMMT 175 (382)
T ss_dssp HHHC-CCCCCTT--TTTTHH-H-HHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEETTHHHHT
T ss_pred HcCC-CCcCccc--chHHHH-H-HHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEEecchhhh
Confidence 5421 1111121 223332 2 2457899999987766555444443210 0011110000 0011 1124565555
Q ss_pred HHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCC-cccccccc---ccCCCccchhHHHHHHhcC------
Q 013959 191 LWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACP-LMYRWHGT---RYWGAANGLAGILQVLLHF------ 260 (433)
Q Consensus 191 l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~~---~~~G~aHG~aGI~~~L~~l------ 260 (433)
+..|..+++.++++++++.+...+.. ..+ .+-+..++.. ..|...+. .-.-||.|.+=.++++.+.
T Consensus 176 ~p~La~~~~~tgd~~y~d~A~~q~~~-~~~---~l~D~~tGl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~ 251 (382)
T 3pmm_A 176 VLPLAKIGKLLNRPQYVEEATYQFLL-HVQ---NLMDRETGLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDL 251 (382)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH-HHH---HHBCTTTSCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHH-HHH---HccCCCCCCeeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcC
Confidence 66778889999987665433333221 111 1111001111 01111111 1244666666666555432
Q ss_pred CC----ChhHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHH
Q 013959 261 PL----SEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAG 336 (433)
Q Consensus 261 ~~----~~~~~~~i~~~l~~l~~~~~~~~gnwp~~~~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~ 336 (433)
.. .+++++.+++.++++.+.+.+ +|.|........++. =.-|++.++.+++.+.+..++ ++.|...|+++.
T Consensus 252 p~~~~~~~~~~~~~~~~a~~~~~~q~~-~G~W~~~~d~~~~y~--EsSatA~~ay~ll~~~~~g~l--~~~Y~~~a~ka~ 326 (382)
T 3pmm_A 252 PEGNAVRRYLITVLDAQIAALAECQDD-SGLWHTLLDDPHSYL--EASATAGFAYGILKAVRKRYV--GQHYAGVAEKAI 326 (382)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHCCT-TSCEESBTTCTTSCE--EHHHHHHHHHHHHHHHHTTSS--CGGGHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHcCCC-CCChhhccCCCCCCc--cccHHHHHHHHHHHHHHcCCC--cHHHHHHHHHHH
Confidence 21 234678889999999888764 889975543222111 234677777788877762223 467999999998
Q ss_pred HHHHHc
Q 013959 337 EVLWKN 342 (433)
Q Consensus 337 ~~~~~~ 342 (433)
+.+.+.
T Consensus 327 ~~l~~~ 332 (382)
T 3pmm_A 327 RGIVQN 332 (382)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 887764
No 9
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.41 E-value=0.016 Score=56.95 Aligned_cols=232 Identities=14% Similarity=0.026 Sum_probs=135.2
Q ss_pred HH-HHHHHHHHHHhCChhHHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccchHHHHHHHHHHhHhCCCCCchhhHH
Q 013959 134 GI-YAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLM 212 (433)
Q Consensus 134 Gi-~~~~~~l~~~~g~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~l~~Ll~l~~~~~~~~~l~~~i~ 212 (433)
|+ +..+..+++.+||+++++.+.+.+.....+ ..+ ..+.| .+..|. +++.+|+.+++++++ ..+.
T Consensus 71 G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~-~~~--------~~n~D--~~~~~~--~l~~lY~~Tgd~~Yl-~~a~ 136 (382)
T 3pmm_A 71 GVGLYGIYQYYQQTGDIEMRDIIDRWFADRFAE-GAT--------TKNVN--TMAPFL--TLAYRFEETGRMAYL-PWLE 136 (382)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-CCC--------CCCTT--TTTTHH--HHHHHHHHHCCGGGH-HHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHcC-CCC--------cCccc--chHHHH--HHHHHHHHhCCHHHH-HHHH
Confidence 54 333455789999988776555544444322 111 11222 244453 678999999999886 4667
Q ss_pred HHHHHHHhccccccccCCCCCccccc-cc--cccCCCccchhHHHHHHhcCC---CChhHHHHH-HHHHHHHHhccCCCC
Q 013959 213 PIVDAVLAGGRAGATANTACPLMYRW-HG--TRYWGAANGLAGILQVLLHFP---LSEEDAEDV-KGTLRYMMSNRFPQS 285 (433)
Q Consensus 213 ~~~~~ll~~~~~~~~~~~~~~~~~~~-~~--~~~~G~aHG~aGI~~~L~~l~---~~~~~~~~i-~~~l~~l~~~~~~~~ 285 (433)
++++.+++..-+.+. ...|.+ .+ ....-++.|..-.+..|++++ -++++.+.+ ++...+....++++.
T Consensus 137 ~~ad~L~~~~~r~~~-----Ggf~~~~~~~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~t 211 (382)
T 3pmm_A 137 SWAEWAMHEMPRTEQ-----GGMQHMTLAEENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRET 211 (382)
T ss_dssp HHHHHHHHTSCBCGG-----GCBCCCCSSCCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTT
T ss_pred HHHHHHHhhCCCCcC-----CCeeeecCCCCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCC
Confidence 778877653211111 001111 01 111223555443444555554 267776654 666666666787878
Q ss_pred CCCCCCC---CCCCCcccccccCChhHHHHHHHHhcCCC-------CCCcHHHHHHHHHHHHHHHHc----CCC----CC
Q 013959 286 GNYPVSE---GNPRDKLVQWSHGATGVAITLCKASQVSV-------FPSDREFRDAAIEAGEVLWKN----GLV----KK 347 (433)
Q Consensus 286 gnwp~~~---~~~~~~~~~WChG~~Gi~l~~l~~~~~~~-------~~~~~~~~~~a~~a~~~~~~~----g~~----~~ 347 (433)
|.|.... +........|+-|..=.+.++....+ . .+ ++++.+.+++.++.+++. |+. ..
T Consensus 212 Gl~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~--~l~~p~~~~~-~~~~~~~~~~~a~~~~~~q~~~G~W~~~~d~ 288 (382)
T 3pmm_A 212 GLWFHGWNYEGRHNFARARWARGNSWLTMVIPDFLE--LVDLPEGNAV-RRYLITVLDAQIAALAECQDDSGLWHTLLDD 288 (382)
T ss_dssp SCBCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHH--HHCCCTTCHH-HHHHHHHHHHHHHHHHHHCCTTSCEESBTTC
T ss_pred CCeeeeccCCCCCCCCcceecccccHHHHHHHHHHH--hhcCCcchhh-HHHHHHHHHHHHHHHHHcCCCCCChhhccCC
Confidence 8775422 11112346799998888888777766 3 22 456777777777776654 221 11
Q ss_pred Cc---ccccchhHHHHHHHHHH--HhCChHHHHHHHHHHHHHHhhh
Q 013959 348 VG---LADGAAGNAYAFLSLYR--LTGETIYVERANAFSSFLYHNA 388 (433)
Q Consensus 348 ~~---LCHG~aG~~~~Ll~~~~--~t~~~~~~~~a~~~~~~~~~~~ 388 (433)
+. =--|.+..++.|++..+ .+ +++|+..|++..+.+++..
T Consensus 289 ~~~y~EsSatA~~ay~ll~~~~~g~l-~~~Y~~~a~ka~~~l~~~i 333 (382)
T 3pmm_A 289 PHSYLEASATAGFAYGILKAVRKRYV-GQHYAGVAEKAIRGIVQNI 333 (382)
T ss_dssp TTSCEEHHHHHHHHHHHHHHHHTTSS-CGGGHHHHHHHHHHHHHTB
T ss_pred CCCCccccHHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHHhhC
Confidence 21 11256777888888888 44 4789999999888887754
No 10
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.40 E-value=0.0067 Score=59.55 Aligned_cols=150 Identities=15% Similarity=0.076 Sum_probs=98.8
Q ss_pred CChhHHHHHHHHHHHHHhccCCCCC---CCCCCCCCCCCcc---cccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHH
Q 013959 262 LSEEDAEDVKGTLRYMMSNRFPQSG---NYPVSEGNPRDKL---VQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEA 335 (433)
Q Consensus 262 ~~~~~~~~i~~~l~~l~~~~~~~~g---nwp~~~~~~~~~~---~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a 335 (433)
-++++++.+.++.+++...+.+..| .|........... .+.| .+.++..+++ +++ +++|.+.|.+.
T Consensus 105 g~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~~~~~~iID~mm-----ni~~L~~A~~--~~g-d~~y~~~A~~~ 176 (377)
T 2ahf_A 105 KDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLL-----NLPLLLWAGE--QTG-DPEYRRVAEAH 176 (377)
T ss_dssp CCHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTTTTTEEEGGGGG-----GHHHHHHHHH--HHC-CTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCCCCceEEechHH-----HHHHHHHHHH--HhC-CHHHHHHHHHH
Confidence 3788999999999999887766434 3532111111100 1222 2456777888 888 99999999998
Q ss_pred HHHHHHcCCC----------------------------CCCcccccchhHHHHHHHHHHHhCChHHHHHHHHHHHHHHhh
Q 013959 336 GEVLWKNGLV----------------------------KKVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHN 387 (433)
Q Consensus 336 ~~~~~~~g~~----------------------------~~~~LCHG~aG~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~ 387 (433)
++.+.+.-+. ...+...|.+-.++.|+.+|+.|++++|++.|.++++++++.
T Consensus 177 a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~ 256 (377)
T 2ahf_A 177 ALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLAR 256 (377)
T ss_dssp HHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHh
Confidence 8876654211 113556667888999999999999999999999999999886
Q ss_pred hhhhcccCC-c---CCCCC--CCcccccHHHHHHHHHHccC
Q 013959 388 AQNLVTSGH-T---RGADH--GYSLFQGLAGTACIWFDLLE 422 (433)
Q Consensus 388 ~~~~~~~g~-~---~~~~~--~~gLm~G~aGig~~Llr~~~ 422 (433)
..+ .+. . ..+.. .+=--.+.|+++++|+++..
T Consensus 257 ~~~---d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~ 294 (377)
T 2ahf_A 257 VPE---DGVVYWDFEVPQEPSSYRDSSASAITACGLLEIAS 294 (377)
T ss_dssp CCT---TSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHH
T ss_pred hHH---hCCcccccCCCccCCCccCCCHHHHHHHHHHHHHH
Confidence 421 111 0 00100 11123578889999998754
No 11
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.29 E-value=0.0065 Score=59.98 Aligned_cols=152 Identities=13% Similarity=0.062 Sum_probs=97.4
Q ss_pred ChhHHHHHHHHHHHHHhccCCCCC---CCCCCCCCCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHH
Q 013959 263 SEEDAEDVKGTLRYMMSNRFPQSG---NYPVSEGNPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVL 339 (433)
Q Consensus 263 ~~~~~~~i~~~l~~l~~~~~~~~g---nwp~~~~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~ 339 (433)
++++++.+.++.+++...+.+..| .|.... +..+. .-|-=... .+.++..+++ +++ +++|.+.|.+.++.+
T Consensus 132 ~~~~~~~~~~aA~~L~~r~~~~~g~iqsw~~~~-~~~~~-~~iID~~m-ni~~L~~A~~--~~g-d~~y~~~A~~ha~~~ 205 (397)
T 2zzr_A 132 DVKALEATIKAADKLMERYQEKGGFIQAWGELG-YKEHY-RLIIDCLL-NIQLLFFAYE--QTG-DEKYRQVAVNHFYAS 205 (397)
T ss_dssp CHHHHHHHHHHHHHHHTTEETTTTEECCSSSTT-CGGGC-EEETTHHH-HTHHHHHHHH--HHC-CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCcCCCEEEecccCC-CCCCC-ceeechHh-HHHHHHHHHH--HhC-CHHHHHHHHHHHHHH
Confidence 778899999999999887766444 342111 11111 11211111 3446667788 899 999999999988877
Q ss_pred HHcCCC----------------------------CCCcccccchhHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhh-
Q 013959 340 WKNGLV----------------------------KKVGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQN- 390 (433)
Q Consensus 340 ~~~g~~----------------------------~~~~LCHG~aG~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~~~- 390 (433)
.+.-+. ...+...|.+-.++.|+.+|+.|+|++|++.|.++++++++...+
T Consensus 206 l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~d 285 (397)
T 2zzr_A 206 ANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPED 285 (397)
T ss_dssp HHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHh
Confidence 654321 012344556778899999999999999999999999998886421
Q ss_pred ---hcccCCcC-CCCCCCcccccHHHHHHHHHHccC
Q 013959 391 ---LVTSGHTR-GADHGYSLFQGLAGTACIWFDLLE 422 (433)
Q Consensus 391 ---~~~~g~~~-~~~~~~gLm~G~aGig~~Llr~~~ 422 (433)
++.. ..+ .+.++.- =.|.|..+++|+++..
T Consensus 286 ~~pywdt-~~~~~~~~~~D-~Sa~aiaA~~Ll~L~~ 319 (397)
T 2zzr_A 286 KVSYWDL-IFTDGSGQPRD-TSATATAVCGIHEMLK 319 (397)
T ss_dssp SCCBSBT-TCCTTSCCCBC-HHHHHHHHHHHHHHHT
T ss_pred CCccccC-CCCCCCCCcCC-CCHHHHHHHHHHHHHH
Confidence 1100 000 0001111 3578888899999865
No 12
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.02 E-value=0.03 Score=54.34 Aligned_cols=236 Identities=12% Similarity=0.031 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHhCChhHHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccchHHHHHHHHHHhHhCCCCCchhhHHH
Q 013959 134 GIYAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMP 213 (433)
Q Consensus 134 Gi~~~~~~l~~~~g~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~l~~Ll~l~~~~~~~~~l~~~i~~ 213 (433)
|.+..+...++.+||+++.+.+.+.+..+..+ .. +... .....|. |. .+++++.+|+.++++++++ .+.+
T Consensus 50 ~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~--~~-~~~~--~~~~DD~--a~--~~la~~~aye~t~~~~yL~-~A~~ 119 (349)
T 3k7x_A 50 HLVEVRLDAYLRTKKQADLEVAEKTYLHNKNR--NG-GTLI--HDFYDDM--LW--NALAAYRLYKATGKSIYLE-DAQL 119 (349)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH--TT-SSSC--CSBHHHH--HH--HHHHHHHHHHHHCCHHHHH-HHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc--CC-CCCC--ccCccHH--HH--HHHHHHHHHHHHCCchHHH-HHHH
Confidence 44344445678899988765555444333211 10 0000 0111221 33 3468999999999887764 5556
Q ss_pred HHHHHHhccccccccCCCCCccccccccccCCCccchhHHHHHHhcCC---CChhHHHHHHHHHHHHHhccCCCCCCCCC
Q 013959 214 IVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFP---LSEEDAEDVKGTLRYMMSNRFPQSGNYPV 290 (433)
Q Consensus 214 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGI~~~L~~l~---~~~~~~~~i~~~l~~l~~~~~~~~gnwp~ 290 (433)
+.+.++... .... ....+.|......+-+.. +.+-.+.++++++ -++.+++.+++..+|+.+.....++..-|
T Consensus 120 l~~~l~~~~--wd~~-~gGGi~W~~~~~~~knai-sN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l~d~~g~v~D 195 (349)
T 3k7x_A 120 VWQDLVDTG--WNDI-MGGGFAWRRPQMYYKNTP-VNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVREDGFVED 195 (349)
T ss_dssp HHHHHHHHT--BCSG-GGSCBEEETTEEEEEEHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBCTTSCBCC
T ss_pred HHHHHHHhC--CCCC-CCCceEecCCCccccchh-hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCeEec
Confidence 666663221 1110 011223332111121111 4555556666665 37889999999999987643322344433
Q ss_pred CCC---C-CCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHH----cCCCCCCcccccc--hhHHHH
Q 013959 291 SEG---N-PRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWK----NGLVKKVGLADGA--AGNAYA 360 (433)
Q Consensus 291 ~~~---~-~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~----~g~~~~~~LCHG~--aG~~~~ 360 (433)
... + .......|-++..=++-++..+++ +++ +++|++.+.+.++.+.+ .|+....+ |.|+ +..+.+
T Consensus 196 g~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~--~T~-d~~yl~~a~~l~~~~~~~f~~~gi~~~~~-~~~D~~sFkgi~ 271 (349)
T 3k7x_A 196 GINRLEDGTIDYEWKFTYNQGVYIGANLELYR--ITK-EAIYLDTANKTAAISLKELTEDGIFKDEG-NGGDEGLFKGIF 271 (349)
T ss_dssp EECTTSSSCBCTTCCCHHHHHHHHHHHHHHHH--HHC-CHHHHHHHHHHHHHHHHHHEETTEECCCC-SSSGGGGHHHHH
T ss_pred CCccCCCCccCCcCeeeHHHHHHHHHHHHHHH--hhC-cHHHHHHHHHHHHHHHHHhccCCcccCCC-CCccHHHHHHHH
Confidence 221 1 111112455555446667888899 898 99999999988876654 34333322 4455 334443
Q ss_pred ---HHHHHHHhCChHHHHHHHHHHHHHHhh
Q 013959 361 ---FLSLYRLTGETIYVERANAFSSFLYHN 387 (433)
Q Consensus 361 ---Ll~~~~~t~~~~~~~~a~~~~~~~~~~ 387 (433)
|..+++.++++.++...++-++.+...
T Consensus 272 ~r~L~~l~~~~p~~~~~~~l~~sa~aa~~~ 301 (349)
T 3k7x_A 272 YRYFTDLIEETANKTYRDFVLNSCQILVEN 301 (349)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCChHHHHHHHHHHHHHHHHh
Confidence 456777778877777777766666553
No 13
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.89 E-value=0.007 Score=59.44 Aligned_cols=209 Identities=11% Similarity=0.056 Sum_probs=118.0
Q ss_pred HHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCCccccccccccCCCccchhHHH-HHHhcCCCChhHHHH
Q 013959 191 LWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGIL-QVLLHFPLSEEDAED 269 (433)
Q Consensus 191 l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGI~-~~L~~l~~~~~~~~~ 269 (433)
+.++..+|+.+++++++ +.+++.++.+++.. + .+. |.... +-+=..|.+ +.|.+..-++++++.
T Consensus 47 ~~gl~~~y~~tgd~~y~-~~a~~~~~~~~~~~--------g-~l~--~~~~~---lDd~~~g~~ll~lY~~Tgd~~yl~~ 111 (373)
T 1nc5_A 47 LCGVLRLWEATGEKRYF-EYAKAYADLLIDDN--------G-NLL--FRRDE---LDAIQAGLILFPLYEQTKDERYVKA 111 (373)
T ss_dssp HHHHHHHHHHHCCHHHH-HHHHHHHHHHBCTT--------C-CBC--CCTTC---GGGTGGGGGHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHhCCHHHH-HHHHHHHHHHhCCC--------C-ccc--CCCCC---cchHHHHHHHHHHHHHhCCHHHHHH
Confidence 55788889999998664 35555555544210 0 011 11111 111112222 223333347888999
Q ss_pred HHHHHHHHHhccCCCC-CCCCCCCCCCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHcCCCCCC
Q 013959 270 VKGTLRYMMSNRFPQS-GNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWKNGLVKKV 348 (433)
Q Consensus 270 i~~~l~~l~~~~~~~~-gnwp~~~~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~~~~~ 348 (433)
+.+..+++........ +.|.... ...-.||-|..-.+..+..+++ +++ +++|.+.|.+.++.+.+.-.....
T Consensus 112 a~~la~~l~~~~r~~~G~fw~~~~----~~~~~w~D~l~m~~p~L~~l~~--~tg-d~~y~d~A~~~~~~~~~~l~D~~t 184 (373)
T 1nc5_A 112 AKRLRSLYGTLNRTSEGGFWHKDG----YPYQMWLDGLYMGGPFALKYAN--LKQ-ETELFDQVVLQESLMRKHTKDAKT 184 (373)
T ss_dssp HHHHHGGGGTSCBCTTSCBCSCTT----STTEEETHHHHHHHHHHHHHHH--HHT-CTHHHHHHHHHHHHHHHHHBCTTT
T ss_pred HHHHHHHHHhccCCCCCCeeccCC----CCCeEEeCcHHHHHHHHHHHHH--HHC-CHHHHHHHHHHHHHHHHHhcCCCC
Confidence 9998888876554433 4563211 1113699998766777888889 899 999999998887776654322223
Q ss_pred ccc-cc---------------------chhHHHHH---HHHHHH-----hCChHHHHHHHHHHHHHHhhhhh--hcccCC
Q 013959 349 GLA-DG---------------------AAGNAYAF---LSLYRL-----TGETIYVERANAFSSFLYHNAQN--LVTSGH 396 (433)
Q Consensus 349 ~LC-HG---------------------~aG~~~~L---l~~~~~-----t~~~~~~~~a~~~~~~~~~~~~~--~~~~g~ 396 (433)
+|+ || .-|++.++ .++++. ++++++++.++++++.+++...+ ..+...
T Consensus 185 Gl~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~~~ 264 (373)
T 1nc5_A 185 GLFYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQI 264 (373)
T ss_dssp SCBCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCBSB
T ss_pred CCEEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCCCCceeee
Confidence 333 42 12555444 445555 34567888889999888765321 111111
Q ss_pred cCCCCCCCccc--ccHHHHHHHHHHcc
Q 013959 397 TRGADHGYSLF--QGLAGTACIWFDLL 421 (433)
Q Consensus 397 ~~~~~~~~gLm--~G~aGig~~Llr~~ 421 (433)
+..+..+-+.- .|.|.++|+|++..
T Consensus 265 ld~~~~~~~~~EsSatA~~ay~l~~g~ 291 (373)
T 1nc5_A 265 VDKGDRSDNWLESSGSCLYMYAIAKGI 291 (373)
T ss_dssp TTCTTSTTCCBCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCccccHHHHHHHHHHHHH
Confidence 11121111222 46788889988864
No 14
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.61 E-value=0.12 Score=50.53 Aligned_cols=267 Identities=14% Similarity=0.027 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCccccCh---HHH-HHHHHHHhhhhCChHHHHHHHHHHHHHHHHhc--
Q 013959 47 FLKAAVSLKDQVVEVTWRRGSGGGGEPGRGMDPTLYTGL---LGT-AFICLRSYELTGNQQELLLSAEIIDTCASVVR-- 120 (433)
Q Consensus 47 ~l~~A~~i~d~i~~~~~~~~~~~~~~~~~~~~~~LY~G~---~Gi-al~l~~L~~~t~~~~y~~~a~~~i~~~~~~~~-- 120 (433)
-...+++++|.++.+.-.... . -..+. .|+ ...+..++++|+|++|++.|.+.++.+.....
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~------~------~~~~W~w~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~~~g~l 80 (373)
T 1nc5_A 13 PLTYAEALANTIMNTYTVEEL------P------PANRWHYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLLIDDNGNL 80 (373)
T ss_dssp HHHHHHHHHHHHHHHCCTTTS------S------STTCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHBCTTCCB
T ss_pred hHHHHHHHHHHHHHhCCCccc------C------CCCCcchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhCCCCcc
Confidence 356667888888875211000 0 01122 444 33577888999999999999988887542100
Q ss_pred -cCCCcccccCcchHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHhccCCCCCCCCC-CC----CCccccccchHHHHHH
Q 013959 121 -DSTRHVTFLCGRGGIYAIGAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGG-FG----MSYDLLYGRAGFLWAA 194 (433)
Q Consensus 121 -~~~~~~~~~~G~~Gi~~~~~~l~~~~g~~~~~~~~~~~i~~~~~~~~l~~~~~~~~-~~----~~~D~l~G~aG~l~~L 194 (433)
......+-+. .|. .+..+++.++++++++.+......+ .. .+ ....++ +. ....++.|..-.+..|
T Consensus 81 ~~~~~~lDd~~--~g~--~ll~lY~~Tgd~~yl~~a~~la~~l-~~--~~-r~~~G~fw~~~~~~~~~w~D~l~m~~p~L 152 (373)
T 1nc5_A 81 LFRRDELDAIQ--AGL--ILFPLYEQTKDERYVKAAKRLRSLY-GT--LN-RTSEGGFWHKDGYPYQMWLDGLYMGGPFA 152 (373)
T ss_dssp CCCTTCGGGTG--GGG--GHHHHHHHHCCHHHHHHHHHHHGGG-GT--SC-BCTTSCBCSCTTSTTEEETHHHHHHHHHH
T ss_pred cCCCCCcchHH--HHH--HHHHHHHHhCCHHHHHHHHHHHHHH-Hh--cc-CCCCCCeeccCCCCCeEEeCcHHHHHHHH
Confidence 0000111111 232 1234688999987665443322222 11 11 111111 11 1122455665556678
Q ss_pred HHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCCccccccccc-------cCCC--ccchhHHHHHH---hcCC-
Q 013959 195 LFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTR-------YWGA--ANGLAGILQVL---LHFP- 261 (433)
Q Consensus 195 l~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-------~~G~--aHG~aGI~~~L---~~l~- 261 (433)
+.+++.++++++++.+ .+.++...+. +.+..++.. ...|.... -.|+ ++=.-|.+|++ .++.
T Consensus 153 ~~l~~~tgd~~y~d~A-~~~~~~~~~~---l~D~~tGl~-~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~ 227 (373)
T 1nc5_A 153 LKYANLKQETELFDQV-VLQESLMRKH---TKDAKTGLF-YHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIE 227 (373)
T ss_dssp HHHHHHHTCTHHHHHH-HHHHHHHHHH---HBCTTTSCB-CSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHCCHHHHHHH-HHHHHHHHHH---hcCCCCCCE-EeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHH
Confidence 8889999998775433 3323222221 111111111 11122111 1122 12233555433 2222
Q ss_pred -C------ChhHHHHHHHHHHHHHhccCCCCCCCCCCCCCC---CCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHH
Q 013959 262 -L------SEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNP---RDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDA 331 (433)
Q Consensus 262 -~------~~~~~~~i~~~l~~l~~~~~~~~gnwp~~~~~~---~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~ 331 (433)
+ .+.+++.+++.++++.+.+.|++|.|....+.. .++. =.-|++.++.+++...+..++ +++|.+.
T Consensus 228 ~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~dG~W~~~ld~~~~~~~~~--EsSatA~~ay~l~~g~~~g~l--~~~Y~~~ 303 (373)
T 1nc5_A 228 ELPKKHPNRHVWKNTLQDMIKSICRYQDKETGLWYQIVDKGDRSDNWL--ESSGSCLYMYAIAKGINKGYL--DRAYETT 303 (373)
T ss_dssp GSCTTCHHHHHHHHHHHHHHHHHHTTSCTTTSCCBSBTTCTTSTTCCB--CHHHHHHHHHHHHHHHHHTSS--CGGGHHH
T ss_pred hCCccchhHHHHHHHHHHHHHHHHHhcCCCCCceeeecCCCCCCCCCc--cccHHHHHHHHHHHHHHCCCC--cHHHHHH
Confidence 1 234678889999999988876688897533211 1111 112456666666665431134 4689999
Q ss_pred HHHHHHHHHHc
Q 013959 332 AIEAGEVLWKN 342 (433)
Q Consensus 332 a~~a~~~~~~~ 342 (433)
++++.+.+.+.
T Consensus 304 a~k~~~~l~~~ 314 (373)
T 1nc5_A 304 LLKAYQGLIQH 314 (373)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99998887763
No 15
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.42 E-value=0.48 Score=47.25 Aligned_cols=292 Identities=11% Similarity=-0.050 Sum_probs=146.5
Q ss_pred CcccCCCCChHHHHHHHHHHHHHHHHhhhcCCC-CCCCC---CC---------CCCCCcc--ccChHHHH-HHHHHHhhh
Q 013959 35 TAAINMSLPCETFLKAAVSLKDQVVEVTWRRGS-GGGGE---PG---------RGMDPTL--YTGLLGTA-FICLRSYEL 98 (433)
Q Consensus 35 ~~~~~~~~~~~~~l~~A~~i~d~i~~~~~~~~~-~~~~~---~~---------~~~~~~L--Y~G~~Gia-l~l~~L~~~ 98 (433)
|.-+.-..+.+++.+.+.+|.+.|...+-.... ...++ .. ..-...+ |.- |+. ..+.+++++
T Consensus 20 ~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~--Gv~l~gl~~ay~~ 97 (445)
T 3k11_A 20 YQGTYGDLTPEQVKKDIDRVFAYIDKETPARVVDKNTGKVITDYTAMGDEAQLERGAFRLASYEW--GVTYSALIAAAET 97 (445)
T ss_dssp CSSCCSCCCHHHHHHHHHHHHHHHHHTSCCCEEETTTCCEECCTTTCCTTEEECCCSSCTTSHHH--HHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHhccCcceeecCCCCceeccccccccccccccCCcccCccCH--HHHHHHHHHHHHH
Confidence 444456678888888888888888873311100 00011 00 0011122 432 444 447889999
Q ss_pred hCChHHHHHHHHHHHHHHHHh-------ccCCCc---------ccccCcchH-HHHHHHHHHHHhCChhHHHHHHHHHHH
Q 013959 99 TGNQQELLLSAEIIDTCASVV-------RDSTRH---------VTFLCGRGG-IYAIGAVVANRMGDRSRRDFFLNLFLE 161 (433)
Q Consensus 99 t~~~~y~~~a~~~i~~~~~~~-------~~~~~~---------~~~~~G~~G-i~~~~~~l~~~~g~~~~~~~~~~~i~~ 161 (433)
|+|++|++.+.+.++-+.... ...... .+. .-..| ++..+..+++.++++++.+.+.+....
T Consensus 98 Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~-LDD~g~~~~~Li~lY~~T~d~~yl~~a~~~ad~ 176 (445)
T 3k11_A 98 TGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHA-LDDAGAVCTAMIKLRLKDESLPVDGLIQNYFDF 176 (445)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCS-GGGTHHHHHHHHHHHHHCTTCCCHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCc-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 999999999998887554321 111110 111 11223 333334567888888776655554444
Q ss_pred HHHhccCCCCCCCCC-CCC---Ccc-ccccchHHHHHHHHHHhHhCCCC--CchhhHHHHHHHHHhccccccccCCCCCc
Q 013959 162 IAQERALPAGPEEGG-FGM---SYD-LLYGRAGFLWAALFVNKHLGAGT--LPNELLMPIVDAVLAGGRAGATANTACPL 234 (433)
Q Consensus 162 ~~~~~~l~~~~~~~~-~~~---~~D-~l~G~aG~l~~Ll~l~~~~~~~~--~l~~~i~~~~~~ll~~~~~~~~~~~~~~~ 234 (433)
++. ..+ .+.+|+ +.. +.. ++.|.-=....|..+.+.+++++ +++.++..+.... + .+-+..++...
T Consensus 177 L~~--~~p-Rt~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~-~---~l~D~~tGL~~ 249 (445)
T 3k11_A 177 IIN--KEY-RLADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFA-D---RMFIPEKGLYR 249 (445)
T ss_dssp HHH--TSC-BCTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH-H---HHEETTTTEEC
T ss_pred HHH--cCC-CCCCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHHHHH-H---hcccCCCCCEe
Confidence 432 121 111121 111 111 24454334456666777888876 5544444332111 1 11100011110
Q ss_pred cccccc-c---ccCCCccchhHHHHHHh----cCCC----ChhHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccccc
Q 013959 235 MYRWHG-T---RYWGAANGLAGILQVLL----HFPL----SEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQW 302 (433)
Q Consensus 235 ~~~~~~-~---~~~G~aHG~aGI~~~L~----~l~~----~~~~~~~i~~~l~~l~~~~~~~~gnwp~~~~~~~~~~~~W 302 (433)
-.|.. . .-.-|+-|.+=.+++|. .+.. .+++++.+++.++.+.+.+.+ +|.|........++ -=
T Consensus 250 -Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~-~G~W~~vld~~~~y--~E 325 (445)
T 3k11_A 250 -HGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSG-EGFWHQLLDCNDSY--LE 325 (445)
T ss_dssp -SEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCT-TSCEESBTTCTTSC--EE
T ss_pred -eeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCC-CCchhhccCCCCCC--CC
Confidence 01211 1 11223444333333333 2321 234678889999999888765 88996544322111 12
Q ss_pred ccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHH
Q 013959 303 SHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWK 341 (433)
Q Consensus 303 ChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~ 341 (433)
.-|++.++.+++.+.+...++ .+.|...|+++.+.+.+
T Consensus 326 sSaTAmfaygllkgvr~G~Ld-~~~Y~~~A~ka~~~L~~ 363 (445)
T 3k11_A 326 TSATAIYVYCLAHAINKGWID-AIAYGPVAQLGWHAVAG 363 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTSSC-HHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHHHHH
Confidence 245677777777766622344 45799999999888764
No 16
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=96.38 E-value=0.045 Score=53.09 Aligned_cols=207 Identities=14% Similarity=0.015 Sum_probs=116.5
Q ss_pred chHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCCccccccccccCCCccchhHHHHHHhcCC---CC
Q 013959 187 RAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFP---LS 263 (433)
Q Consensus 187 ~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGI~~~L~~l~---~~ 263 (433)
.+|.+-+|...++.++++++. ..+.+..+.+.... . ...+ .++-|=.+=.++++++++ -+
T Consensus 48 ~a~~~~~l~d~~~~tgd~~y~-~~a~~~~~~~~~~~-----~-~~~~----------~~~~DD~a~~~la~~~aye~t~~ 110 (349)
T 3k7x_A 48 LAHLVEVRLDAYLRTKKQADL-EVAEKTYLHNKNRN-----G-GTLI----------HDFYDDMLWNALAAYRLYKATGK 110 (349)
T ss_dssp HHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHT-----T-SSSC----------CSBHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhCCHHHH-HHHHHHHHHHHhcC-----C-CCCC----------ccCccHHHHHHHHHHHHHHHHCC
Confidence 567778899999999997664 34555555444210 0 0000 011121111234555554 37
Q ss_pred hhHHHHHHHHHHHH-HhccCCC-CC--CCCCCCCCCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHH
Q 013959 264 EEDAEDVKGTLRYM-MSNRFPQ-SG--NYPVSEGNPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVL 339 (433)
Q Consensus 264 ~~~~~~i~~~l~~l-~~~~~~~-~g--nwp~~~~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~ 339 (433)
+++++.+++..+++ .....+. .| .|-.. ...+..+.++|. .+..+..+++ +++ ++.|++.|+++.+.+
T Consensus 111 ~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~---~~~~knaisN~~--~~~~la~l~~--~tg-d~~Yl~~A~~~~~w~ 182 (349)
T 3k7x_A 111 SIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP---QMYYKNTPVNAP--FIILSCWLYN--ELN-ETKYLEWAMKTYEWQ 182 (349)
T ss_dssp HHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT---EEEEEEHHHHHH--HHHHHHHHHH--HHC-CHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCCCCCCceEecCC---CccccchhhHHH--HHHHHHHHHH--HhC-CHHHHHHHHHHHHHH
Confidence 88999999999998 5544432 23 24210 011122333333 3344455667 788 999999999998876
Q ss_pred HHcCCCCC---------------------CcccccchhHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhhhhhcccCCcC
Q 013959 340 WKNGLVKK---------------------VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHTR 398 (433)
Q Consensus 340 ~~~g~~~~---------------------~~LCHG~aG~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~ 398 (433)
.+ ++.+. .+.+.|. .+..+..+|+.|+|++|+++|+++++.+++.+. .+|-+.
T Consensus 183 ~~-~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~--~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f~---~~gi~~ 256 (349)
T 3k7x_A 183 TK-VLVREDGFVEDGINRLEDGTIDYEWKFTYNQGV--YIGANLELYRITKEAIYLDTANKTAAISLKELT---EDGIFK 256 (349)
T ss_dssp HH-HHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHH--HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE---ETTEEC
T ss_pred Hh-cCCCCCCeEecCCccCCCCccCCcCeeeHHHHH--HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhc---cCCccc
Confidence 54 22110 1122222 566788999999999999999999998876543 222111
Q ss_pred C-C-CCCCcccccHHHHHHHHHHccCcc
Q 013959 399 G-A-DHGYSLFQGLAGTACIWFDLLEPV 424 (433)
Q Consensus 399 ~-~-~~~~gLm~G~aGig~~Llr~~~p~ 424 (433)
. + ......|.|+.=-.+..+....|.
T Consensus 257 ~~~~~~D~~sFkgi~~r~L~~l~~~~p~ 284 (349)
T 3k7x_A 257 DEGNGGDEGLFKGIFYRYFTDLIEETAN 284 (349)
T ss_dssp CCCSSSGGGGHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHCCh
Confidence 1 1 122346666655555544444443
No 17
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=94.84 E-value=0.68 Score=45.50 Aligned_cols=244 Identities=13% Similarity=0.110 Sum_probs=120.9
Q ss_pred HHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHhccCC-Cc--ccccCcch----------H--HHHHHHHHHHHhCChhH
Q 013959 87 GTAFICLRSYELTGNQQELLLSAEIIDTCASVVRDST-RH--VTFLCGRG----------G--IYAIGAVVANRMGDRSR 151 (433)
Q Consensus 87 Gial~l~~L~~~t~~~~y~~~a~~~i~~~~~~~~~~~-~~--~~~~~G~~----------G--i~~~~~~l~~~~g~~~~ 151 (433)
=++.+|+..+++++++.|++.|.+.++-+.+...... .. .++-.|.. . +++++. +..++++++
T Consensus 56 r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~--~~~tgd~~~ 133 (402)
T 3gt5_A 56 RFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC--GLKVGIKQA 133 (402)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH--HHHTTCTTH
T ss_pred HHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH--HHHhCChhH
Confidence 3557788888899999999999988887766543211 10 11112211 1 112222 456888876
Q ss_pred HHHHHHHHHHHHHhccC-CC-CC-CC-CCCCCCccccccchH---HHHHHHHHHhHhCCCCCchhhHHHHHHHHHhcccc
Q 013959 152 RDFFLNLFLEIAQERAL-PA-GP-EE-GGFGMSYDLLYGRAG---FLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRA 224 (433)
Q Consensus 152 ~~~~~~~i~~~~~~~~l-~~-~~-~~-~~~~~~~D~l~G~aG---~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~ 224 (433)
++.+.+....+. +... +. +. .+ ...+...+-+-+... ++-+++.+++.++++.++ +.++++++.+.+.-..
T Consensus 134 l~~A~~l~~~i~-~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~-~~a~~l~~~~~~~f~~ 211 (402)
T 3gt5_A 134 REWMDETWCLLE-RHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYL-ERALVLADRITRRQAA 211 (402)
T ss_dssp HHHHHHHHHHHH-HHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHH-HHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHH-HHHHHHHHHHHHHhhC
Confidence 655444333332 2111 10 10 00 000000011112233 344689999999987664 3455555544431000
Q ss_pred ccccCCCCCccc--cccc-------c---cc----CCCccchhHHHHHHhcCC---CChhHHHHHHHHHHHHHhcc-CCC
Q 013959 225 GATANTACPLMY--RWHG-------T---RY----WGAANGLAGILQVLLHFP---LSEEDAEDVKGTLRYMMSNR-FPQ 284 (433)
Q Consensus 225 ~~~~~~~~~~~~--~~~~-------~---~~----~G~aHG~aGI~~~L~~l~---~~~~~~~~i~~~l~~l~~~~-~~~ 284 (433)
.........+ .|.. . .+ +...|.+= .++.|++++ -++.+++.+++..++..+.. +++
T Consensus 212 --~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE-~awlLl~~~~~~~~~~~~~~A~~l~~~~~~~gwd~~ 288 (402)
T 3gt5_A 212 --KADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTE-WAKLLLILDRYIEVEWLVPVARSLFDVAVARSWDAV 288 (402)
T ss_dssp --TTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHH-HHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHBCTT
T ss_pred --ccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHH-HHHHHHHHHHhhCcHHHHHHHHHHHHHHHHhcccCC
Confidence 0000000001 1110 0 01 11133322 234455553 25668888888888776543 333
Q ss_pred CCCCCCCCCC--C--CCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHc
Q 013959 285 SGNYPVSEGN--P--RDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWKN 342 (433)
Q Consensus 285 ~gnwp~~~~~--~--~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~ 342 (433)
.|.+...... . .....-|++.- .+.+++.+++ .++ +++|++.+.+..+.+++.
T Consensus 289 ~Gg~~~~~d~~g~~~~~~k~~W~qaE--al~a~l~ly~--~tg-d~~yl~~a~~~~~~~~~~ 345 (402)
T 3gt5_A 289 RGGLCYGFAPDGTICDDDKYFWVQAE--SLAAAALLAT--RSG-DERYWQWYDRLWAYAWQH 345 (402)
T ss_dssp TCSBCSEECTTSCEEECCEEHHHHHH--HHHHHHHHHH--HHC-CHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcCCCCeeeCCcceeHHHH--HHHHHHHHHH--HhC-CHHHHHHHHHHHHHHHHh
Confidence 4544322211 1 12335688754 3445777788 888 999999998888777653
No 18
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.80 E-value=0.31 Score=48.70 Aligned_cols=222 Identities=7% Similarity=-0.049 Sum_probs=120.7
Q ss_pred hHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhcccc---ccccCCCCCccccccccccCCCccchhHHHHHHhcCC---
Q 013959 188 AGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRA---GATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFP--- 261 (433)
Q Consensus 188 aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~---~~~~~~~~~~~~~~~~~~~~G~aHG~aGI~~~L~~l~--- 261 (433)
+-.+.++..+++.++++++++ .+++.++.+.+.... +.+.. ..+..++......|+-+=...++++|+.++
T Consensus 85 Gv~l~gl~~ay~~Tgd~kY~~-ya~~~~dfi~~~~p~~~~~~~~~--G~l~~~~r~~~~~~~LDD~g~~~~~Li~lY~~T 161 (445)
T 3k11_A 85 GVTYSALIAAAETTGDKRYTD-YVQNRFRFLAEVAPHFKRVYEEK--GKTDSQLLQILTPHALDDAGAVCTAMIKLRLKD 161 (445)
T ss_dssp HHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHH--SCCCHHHHHHHSCCSGGGTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHhccchhhhhhhcc--CCeecccccccCCCcchhHHHHHHHHHHHHHhc
Confidence 455678899999999987753 555555554431100 00000 001111111112344333455666666664
Q ss_pred CChhHHHHHHHHHHHHHhcc--CCCCCCCCCCCCCCCCcccccccCChhHHHHHHHHhcCCCCCCcHH--HHHHHHHHHH
Q 013959 262 LSEEDAEDVKGTLRYMMSNR--FPQSGNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVSVFPSDRE--FRDAAIEAGE 337 (433)
Q Consensus 262 ~~~~~~~~i~~~l~~l~~~~--~~~~gnwp~~~~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~--~~~~a~~a~~ 337 (433)
-++++++.+.+..+++.+.+ .++.+.|... ....-.||=|..=....+..+++ .++ +++ +.++|.+-..
T Consensus 162 ~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~----~~~~q~WiD~lyM~~pfla~~~~--~tg-d~~~~y~d~A~~q~~ 234 (445)
T 3k11_A 162 ESLPVDGLIQNYFDFIINKEYRLADGTFARNR----PQRNTLWLDDMFMGIPAVAQMSR--YDK-EAKNKYLAEAVKQFL 234 (445)
T ss_dssp TTCCCHHHHHHHHHHHHHTSCBCTTCCBCBCS----SSTTEEETHHHHHHHHHHHHHHH--HCG-GGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCCCCceeecC----CCCCceEecchhhHHHHHHHHHH--HHC-CcchHHHHHHHHHHH
Confidence 36678999999999998865 3344566421 11123688887566667777888 888 888 8888776555
Q ss_pred HHHHc------CCC-------C-C---CcccccchhHHHHHHHHHHHh-----CChHHHHHHHHHHHHHHhhhhhhcccC
Q 013959 338 VLWKN------GLV-------K-K---VGLADGAAGNAYAFLSLYRLT-----GETIYVERANAFSSFLYHNAQNLVTSG 395 (433)
Q Consensus 338 ~~~~~------g~~-------~-~---~~LCHG~aG~~~~Ll~~~~~t-----~~~~~~~~a~~~~~~~~~~~~~~~~~g 395 (433)
...+. |+. + . ..+.=|.+=.++.+.++++.+ +.+++.+..+++++.++....+ .|
T Consensus 235 ~~~~~l~D~~tGL~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~---~G 311 (445)
T 3k11_A 235 QFADRMFIPEKGLYRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSG---EG 311 (445)
T ss_dssp HHHHHHEETTTTEECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCT---TS
T ss_pred HHHHhcccCCCCCEeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCC---CC
Confidence 54432 221 0 0 112222222333344555543 3456777778888887765332 22
Q ss_pred Cc-CCCCCCCcc--cccHHHHHHHHHHccC
Q 013959 396 HT-RGADHGYSL--FQGLAGTACIWFDLLE 422 (433)
Q Consensus 396 ~~-~~~~~~~gL--m~G~aGig~~Llr~~~ 422 (433)
.. ...+.+-+. -.|.|.++|+|++...
T Consensus 312 ~W~~vld~~~~y~EsSaTAmfaygllkgvr 341 (445)
T 3k11_A 312 FWHQLLDCNDSYLETSATAIYVYCLAHAIN 341 (445)
T ss_dssp CEESBTTCTTSCEEHHHHHHHHHHHHHHHH
T ss_pred chhhccCCCCCCCCccHHHHHHHHHHHHHH
Confidence 11 111121122 3688889999988643
No 19
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=94.47 E-value=0.12 Score=51.15 Aligned_cols=131 Identities=20% Similarity=0.195 Sum_probs=81.6
Q ss_pred HHHHHhcCC---CChhHHHHHHHHHHHHHhc-cCCCCCCCCCCCCCC-CCcccccccCChhHHHHHHHHhcCCCCCCcHH
Q 013959 253 ILQVLLHFP---LSEEDAEDVKGTLRYMMSN-RFPQSGNYPVSEGNP-RDKLVQWSHGATGVAITLCKASQVSVFPSDRE 327 (433)
Q Consensus 253 I~~~L~~l~---~~~~~~~~i~~~l~~l~~~-~~~~~gnwp~~~~~~-~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~ 327 (433)
++++++.++ -++++++.++++++|+.+. .+++.|.|.....+. .......|+.-+=.+++++. +. .++ +++
T Consensus 57 ~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~--~tg-d~~ 132 (402)
T 3gt5_A 57 FVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GL--KVG-IKQ 132 (402)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HH--HTT-CTT
T ss_pred HHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HH--HhC-Chh
Confidence 345555554 2678999999999999874 344336554332111 00112455555555556666 44 567 899
Q ss_pred HHHHHHHHHHHHHHc------CCCC---CC--cc--cccchh---HHHHHHHHHHHhCChHHHHHHHHHHHHHHhh
Q 013959 328 FRDAAIEAGEVLWKN------GLVK---KV--GL--ADGAAG---NAYAFLSLYRLTGETIYVERANAFSSFLYHN 387 (433)
Q Consensus 328 ~~~~a~~a~~~~~~~------g~~~---~~--~L--CHG~aG---~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~ 387 (433)
+++.|.++.+.+.+. |... .. .+ .-+... .++.+++++++|++++|.++|+++++.+...
T Consensus 133 ~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~~~~~ 208 (402)
T 3gt5_A 133 AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADRITRR 208 (402)
T ss_dssp HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 999999988776553 2111 01 01 012222 3456899999999999999999999887664
No 20
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=93.91 E-value=0.13 Score=50.23 Aligned_cols=122 Identities=11% Similarity=-0.006 Sum_probs=76.5
Q ss_pred ChhHHHHHHHHHHHHHhc-cCCCCCCCCCCCC--CCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHH
Q 013959 263 SEEDAEDVKGTLRYMMSN-RFPQSGNYPVSEG--NPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVL 339 (433)
Q Consensus 263 ~~~~~~~i~~~l~~l~~~-~~~~~gnwp~~~~--~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~ 339 (433)
++++++.++++++|+++. ..+ +|.|..... .+......-|.+-.=.+.++..+++ +++ ++++++.|.++.+.+
T Consensus 72 ~~~~~~~A~~~~~~l~~~~~~~-~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~--~tg-~~~~l~~A~~~~~~i 147 (388)
T 2gz6_A 72 RENWLKIARNGAKFLAQHGRDD-EGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYAL--ASG-EEWAKDVAMQAYNNV 147 (388)
T ss_dssp CHHHHHHHHHHHHHHHHHSBCT-TSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHH--HHC-CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHH--HhC-CHHHHHHHHHHHHHH
Confidence 578899999999999885 444 466643321 1100001223332224556667778 888 999999999988776
Q ss_pred HHc-----CCCC----CCcccccchhH---HHHHHHHHHHhCChHHHHHHHHHHHHHHhhh
Q 013959 340 WKN-----GLVK----KVGLADGAAGN---AYAFLSLYRLTGETIYVERANAFSSFLYHNA 388 (433)
Q Consensus 340 ~~~-----g~~~----~~~LCHG~aG~---~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~ 388 (433)
.+. |+.. .....-|..++ +..++.+++.|++++|+++|.++++.+....
T Consensus 148 ~~~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~~ 208 (388)
T 2gz6_A 148 LRRKDNPKGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGDF 208 (388)
T ss_dssp HTC--------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCCcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 432 2210 01112233333 3446889999999999999999999887754
No 21
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=90.67 E-value=2.8 Score=41.36 Aligned_cols=193 Identities=9% Similarity=0.036 Sum_probs=98.3
Q ss_pred cchHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCCcccc-ccc--cccCCCccchhH---HHHHHhc
Q 013959 186 GRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYR-WHG--TRYWGAANGLAG---ILQVLLH 259 (433)
Q Consensus 186 G~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~-~~~--~~~~G~aHG~aG---I~~~L~~ 259 (433)
..|=++.+++. |+.++++.++ +.+.++.+.+.+.-.. ... ...+. +.. ....+. -+..+ .+.+|++
T Consensus 112 d~Af~i~al~~-~~~tg~~~~l-~~a~~~~~~l~~~~~d---~~~--Ggf~~~~d~d~~~~~~~-~~~n~~m~~~~al~~ 183 (421)
T 2zbl_A 112 QHFFALLGAAS-AVTTGHPEAR-KLLDYTIEVIEKYFWS---EEE--QMCLESWDEAFSQTEDY-RGGNANMHAVEAFLI 183 (421)
T ss_dssp HHHHHHHHHHH-HHTTTCTTHH-HHHHHHHHHHHHHTEE---TTT--TEECCEECTTSCSBCSC-EEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHhCCccHH-HHHHHHHHHHHHHhcc---CCC--CCeeeeecCCCCccccc-CCCcHHHHHHHHHHH
Confidence 33555567777 7778877654 3555566555542111 000 00111 000 000010 12333 2345555
Q ss_pred CC-C--ChhHHHHHHHHHHHHHhccCC-CCCCCCCCCCCCCCccccc----ccC-------ChhHH----HHHHHHhcCC
Q 013959 260 FP-L--SEEDAEDVKGTLRYMMSNRFP-QSGNYPVSEGNPRDKLVQW----SHG-------ATGVA----ITLCKASQVS 320 (433)
Q Consensus 260 l~-~--~~~~~~~i~~~l~~l~~~~~~-~~gnwp~~~~~~~~~~~~W----ChG-------~~Gi~----l~~l~~~~~~ 320 (433)
++ + ++++.+.++++++........ ..+..+....+........ +.+ .||-. -.++.+++
T Consensus 184 l~~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~-- 261 (421)
T 2zbl_A 184 VYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHA-- 261 (421)
T ss_dssp HHHTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHH--
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHH--
Confidence 54 2 567888889998887643221 1121110000000000011 111 35642 24555666
Q ss_pred CC---CCc--H-HHHHHHHHHHHHHHHcCCCCC--Ccccc-----cc-----------hhHHHHHHHHHHHhCChHHHHH
Q 013959 321 VF---PSD--R-EFRDAAIEAGEVLWKNGLVKK--VGLAD-----GA-----------AGNAYAFLSLYRLTGETIYVER 376 (433)
Q Consensus 321 ~~---~~~--~-~~~~~a~~a~~~~~~~g~~~~--~~LCH-----G~-----------aG~~~~Ll~~~~~t~~~~~~~~ 376 (433)
++ + + + .+++.|.+..+.+++.|.... .+++. |. +=.+..++.+|+.|++++|.+.
T Consensus 262 ~~~~~~-~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~ 340 (421)
T 2zbl_A 262 ALEARF-ETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEW 340 (421)
T ss_dssp HHHHTT-CCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred Hccccc-ccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 55 3 3 4 799999888887776654321 22221 22 2235568899999999999999
Q ss_pred HHHHHHHHHhhhh
Q 013959 377 ANAFSSFLYHNAQ 389 (433)
Q Consensus 377 a~~~~~~~~~~~~ 389 (433)
++++.+++.....
T Consensus 341 a~~~~~~~~~~~~ 353 (421)
T 2zbl_A 341 YQKWWDYCIKYLM 353 (421)
T ss_dssp HHHHHHHHHHHTB
T ss_pred HHHHHHHHHHhCC
Confidence 9999888865443
No 22
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=90.18 E-value=0.67 Score=45.38 Aligned_cols=74 Identities=19% Similarity=0.205 Sum_probs=56.7
Q ss_pred HHHHHhcCCCCCCcHHHHHHHHHHHHHH-HHcCCCCC-Cccccc-----c--------h-------hHHHHHHHHHHHhC
Q 013959 312 TLCKASQVSVFPSDREFRDAAIEAGEVL-WKNGLVKK-VGLADG-----A--------A-------GNAYAFLSLYRLTG 369 (433)
Q Consensus 312 ~~l~~~~~~~~~~~~~~~~~a~~a~~~~-~~~g~~~~-~~LCHG-----~--------a-------G~~~~Ll~~~~~t~ 369 (433)
.++.+++ +++ ++.+++.|.++++.+ ++.|...+ .+++|- . + =.+..++.+|+.|+
T Consensus 255 lL~~a~~--~~~-~~~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tg 331 (402)
T 1fp3_A 255 FLLRHSS--RSG-DAKLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESG 331 (402)
T ss_dssp HHHHHHH--HTT-CHHHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHH--HcC-ChHHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhC
Confidence 4677778 888 999999999999888 87775432 344442 2 1 11667889999999
Q ss_pred ChHHHHHHHHHHHHHHhhh
Q 013959 370 ETIYVERANAFSSFLYHNA 388 (433)
Q Consensus 370 ~~~~~~~a~~~~~~~~~~~ 388 (433)
|++|++.|.++.+++...+
T Consensus 332 d~~yl~~a~~~~~~~~~~f 350 (402)
T 1fp3_A 332 DPALLRLFYQVAEYTFRQF 350 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhC
Confidence 9999999999999887654
No 23
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=88.59 E-value=1.1 Score=44.42 Aligned_cols=120 Identities=16% Similarity=0.122 Sum_probs=74.8
Q ss_pred ChhHHHHHHHHHHHHHhcc-CCCCCCCCCCCCCC--CCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHH
Q 013959 263 SEEDAEDVKGTLRYMMSNR-FPQSGNYPVSEGNP--RDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVL 339 (433)
Q Consensus 263 ~~~~~~~i~~~l~~l~~~~-~~~~gnwp~~~~~~--~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~ 339 (433)
++++++.++++++++.+.. ++..|.|..+.... ... ...++.-+=++.+++. ++ +++ ++.+++.+.++.+.+
T Consensus 68 ~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d~dg~~~~-~k~lyd~Af~i~al~~-~~--~tg-~~~~l~~a~~~~~~l 142 (421)
T 2zbl_A 68 RPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDA-SKQGYQHFFALLGAAS-AV--TTG-HPEARKLLDYTIEVI 142 (421)
T ss_dssp CTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEETTEEEEC-CEEHHHHHHHHHHHHH-HH--TTT-CTTHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHhccCcCCCeEEEEeCCCCCcCC-chhHHHHHHHHHHHHH-HH--HhC-CccHHHHHHHHHHHH
Confidence 5778999999999998753 33335554332110 000 1333333444446666 67 888 899999888887765
Q ss_pred HHc------C-CC----CCCccc---ccchh---HHHHHHHHHHHhCChHHHHHHHHHHHHHHhh
Q 013959 340 WKN------G-LV----KKVGLA---DGAAG---NAYAFLSLYRLTGETIYVERANAFSSFLYHN 387 (433)
Q Consensus 340 ~~~------g-~~----~~~~LC---HG~aG---~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~ 387 (433)
.+. | +. ...... -+..+ .+..|++++++|++++|.++|.++++.+...
T Consensus 143 ~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~ 207 (421)
T 2zbl_A 143 EKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHD 207 (421)
T ss_dssp HHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCC
T ss_pred HHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 542 2 10 000000 11233 3677899999999999999999999887653
No 24
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=86.99 E-value=2.5 Score=40.12 Aligned_cols=133 Identities=11% Similarity=0.169 Sum_probs=84.8
Q ss_pred chhHHHHHHhcCCC---ChhHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCc--ccccccCChhHHHHHHHHhcC----
Q 013959 249 GLAGILQVLLHFPL---SEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDK--LVQWSHGATGVAITLCKASQV---- 319 (433)
Q Consensus 249 G~aGI~~~L~~l~~---~~~~~~~i~~~l~~l~~~~~~~~gnwp~~~~~~~~~--~~~WChG~~Gi~l~~l~~~~~---- 319 (433)
.++-.+.+|.+++. ++.+.+.+.++++|++..|.+ +|.||-...+...+ ...+|=..++-++-++.....
T Consensus 75 dTa~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~~-nGGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~~~~~~~~~ 153 (332)
T 1gxm_A 75 ATITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQYS-TGALPQFYPLKGGYSDHATFNDNGMAYALTVLDFAANKRAP 153 (332)
T ss_dssp TTHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCT-TSCCBSEESCCSGGGGSEECGGGHHHHHHHHHHHHHTTCTT
T ss_pred cHHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccCC-CCCccccCCCcccccccCCcchHHHHHHHHHHHHHHhccCC
Confidence 45667778887752 567899999999999998887 89998754332222 246777777777766654420
Q ss_pred ---CCCCCc---HHHHHHHHHHHHHHHHcCCC----------------------C--C-Ccccccch-hHHHHHHHHHHH
Q 013959 320 ---SVFPSD---REFRDAAIEAGEVLWKNGLV----------------------K--K-VGLADGAA-GNAYAFLSLYRL 367 (433)
Q Consensus 320 ---~~~~~~---~~~~~~a~~a~~~~~~~g~~----------------------~--~-~~LCHG~a-G~~~~Ll~~~~~ 367 (433)
+++. + ++....++++++.+++.... + + ++||-..+ |++.+|+....
T Consensus 154 ~~~~~~~-~~~~~~~~~av~Rgid~Llk~Qe~dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~~LM~~~~- 231 (332)
T 1gxm_A 154 FDTDVFS-DNDRTRFKTAVTKGTDYILKAQWKQNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLAFLMTQPQ- 231 (332)
T ss_dssp SCSTTSC-HHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHHHHTTSCC-
T ss_pred ccccccc-cchhhhhHHHHHHHHHHHHHhhCccCCCcCeeccccccccccccccccccccchhHHHHHHHHHHhccCCC-
Confidence 0133 3 45556677888887764320 0 1 36665543 55555554432
Q ss_pred hCChHHHHHHHHHHHHHHh
Q 013959 368 TGETIYVERANAFSSFLYH 386 (433)
Q Consensus 368 t~~~~~~~~a~~~~~~~~~ 386 (433)
+++++...++..+++..
T Consensus 232 --~~~v~~aI~~Av~WL~~ 248 (332)
T 1gxm_A 232 --TAEIEQAVRAGVAWFNS 248 (332)
T ss_dssp --CHHHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHHHHHHHHHh
Confidence 67887777777787754
No 25
>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinus} PDB: 3e80_A* 2fut_A* 2fuq_A*
Probab=78.70 E-value=5.8 Score=42.21 Aligned_cols=211 Identities=13% Similarity=-0.018 Sum_probs=94.1
Q ss_pred HHHHHHHhCChhHHHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccchHHHHHHHHHHhHhCCCCCchhhHHHHHHHH
Q 013959 139 GAVVANRMGDRSRRDFFLNLFLEIAQERALPAGPEEGGFGMSYDLLYGRAGFLWAALFVNKHLGAGTLPNELLMPIVDAV 218 (433)
Q Consensus 139 ~~~l~~~~g~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~D~l~G~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~l 218 (433)
+...+.++||+++++++.+.+..++... . |....|+-.+.+=++.++...|....+ .+..+.-+++.+.|
T Consensus 88 LalAylLtgD~ryad~a~~~L~~~~~~~--~-------W~~~~Dl~~~~a~~~~~lA~aYD~Lyd-~Ls~eeR~~Ir~~I 157 (749)
T 3e7j_A 88 MALNYLMTKDPKVGREAITSIIDTLETA--T-------FKPAGDISRGIGLFMVTGAIVYDWCYD-QLKPEEKTRFVKAF 157 (749)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHC--C-------CCCCTTTHHHHHHHHHHHHHHHHHTGG-GCCHHHHHHHHHHH
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHhhcc--c-------CCCcccchHHHHHHHHHHHHHHHHHhh-hCCHHHHHHHHHHH
Confidence 3445778899998888888877776321 1 222344432233344555555655543 23223333444444
Q ss_pred HhccccccccCCCCCcccccc-cccc-CCCccchhHHHHHHhcCCCChhHHHHH----HHHHHHHHhccCCCCCCCCCCC
Q 013959 219 LAGGRAGATANTACPLMYRWH-GTRY-WGAANGLAGILQVLLHFPLSEEDAEDV----KGTLRYMMSNRFPQSGNYPVSE 292 (433)
Q Consensus 219 l~~~~~~~~~~~~~~~~~~~~-~~~~-~G~aHG~aGI~~~L~~l~~~~~~~~~i----~~~l~~l~~~~~~~~gnwp~~~ 292 (433)
.+.+...... ..+..+.|. ...+ .-.|+|.... +|+.+.-.++..+.+ .+....+ ..+...+|.|+
T Consensus 158 ~~~~~~p~~~--w~~~~~~~~~~~~NWn~vc~Gll~a--ALAL~~d~pe~~~~~~~~~~~~~~~l-~~~~~~DG~~~--- 229 (749)
T 3e7j_A 158 VRLAKMLECG--YPPVKDKSIVGAASEWMIMRDLLSV--GIAIYDEFPEMYNLAAGRFFKEHLVA-RNWFYPSHNYH--- 229 (749)
T ss_dssp HHHHTTSTTC--SSSCSSCSSSSGGGTHHHHTHHHHH--HHHTTTTCTHHHHHHHHHHHHTHHHH-HHHHGGGCCCS---
T ss_pred HHHHHHHHHh--ccccccccccCCChHHHHHHHHHHH--HHHHcCCcHHHHHHHHHHHHHhhhhh-hcccCCCCCcc---
Confidence 4433221111 111101111 1112 2346643222 333332233322222 1222112 11212378885
Q ss_pred CCCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHcCCCCCCcccccchh--------HHHHHHHH
Q 013959 293 GNPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWKNGLVKKVGLADGAAG--------NAYAFLSL 364 (433)
Q Consensus 293 ~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~~~~~~LCHG~aG--------~~~~Ll~~ 364 (433)
.-...|-||..-.+.....+.+ .++ .+.+....+++.+.....-...+..+..|+++ ....+..+
T Consensus 230 ----EG~~Yw~yg~~~l~~~~~aL~~--~tg-~d~~~p~l~k~a~y~l~~~~p~g~~~nfgDs~~~~~~p~~~~~al~~~ 302 (749)
T 3e7j_A 230 ----QGMSALNVRFTNDLFALWILDR--MGA-GNVFNPGQQFILYDAIYKRRPDGQILAGGDVDYSRKKPKYYTMPALLA 302 (749)
T ss_dssp ----SHHHHHHHHHHHHHHHHHHHHH--HTT-CCCSCGGGGGTTHHHHHTBCTTSCBCCCSSCCCCSSSCCCCHHHHHHH
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHh--hhc-chhhHHHHHHHHHHHHHeeCCCCceeecCCCCcccCccccchHHHHHH
Confidence 1224688998887776666665 443 21111222333333333211122233333332 23445567
Q ss_pred HHHhCChHHH
Q 013959 365 YRLTGETIYV 374 (433)
Q Consensus 365 ~~~t~~~~~~ 374 (433)
++.++||.+.
T Consensus 303 a~~~~dp~l~ 312 (749)
T 3e7j_A 303 GSYYKDEYLN 312 (749)
T ss_dssp HHHHTCHHHH
T ss_pred HHhhCCHHHH
Confidence 8889999765
No 26
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=78.45 E-value=12 Score=38.48 Aligned_cols=69 Identities=9% Similarity=-0.060 Sum_probs=45.1
Q ss_pred CChHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCccccChHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHh
Q 013959 42 LPCETFLKAAVSLKDQVVEVTWRRGSGGGGEPGRGMDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVV 119 (433)
Q Consensus 42 ~~~~~~l~~A~~i~d~i~~~~~~~~~~~~~~~~~~~~~~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~~i~~~~~~~ 119 (433)
+..+++++.|+++-+-+......-.. . -+.+..+=. -.+...+.||+.|++++|++.|.+..+.+....
T Consensus 271 ~~a~~~L~aA~~a~~fa~~~~~~y~~-----~---g~~~~~De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~ 339 (586)
T 3h7l_A 271 YDQQKYRNAAENGYWHLKEHNTQYLN-----D---GEENIIDEY-CALLASVELFKATKETRYLEESRLWAQRLVARQ 339 (586)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHST-----T---SCCCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTE
T ss_pred cChHHHHHHHHHHHHHHHhcCccccC-----C---CCccchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 45789999999999888774321111 0 011111111 125667889999999999999988887776544
No 27
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=76.83 E-value=11 Score=36.69 Aligned_cols=135 Identities=11% Similarity=0.111 Sum_probs=79.8
Q ss_pred hhHHHHHHhcCC-C-----ChhHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCc--ccccccCChhHHHHHHHHhcC--
Q 013959 250 LAGILQVLLHFP-L-----SEEDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDK--LVQWSHGATGVAITLCKASQV-- 319 (433)
Q Consensus 250 ~aGI~~~L~~l~-~-----~~~~~~~i~~~l~~l~~~~~~~~gnwp~~~~~~~~~--~~~WChG~~Gi~l~~l~~~~~-- 319 (433)
++-.+.+|.+++ . ++.+.+.+.++++|++..|.+ +|.||-...+...+ ...+|=..++-++.++.....
T Consensus 151 Ta~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~-nGGWpqFdpdn~~y~~~IpFnDDvt~rvle~L~~~~~~~ 229 (408)
T 1r76_A 151 TVTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFP-NGGWPQVWPLEGGYHDAITYNDDALVHVAELLSDIAAGR 229 (408)
T ss_dssp THHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCT-TSCCBSBSSCCCGGGGSEECGGGHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCC-CCCCcCcCccccccccCCCcCcHHHHHHHHHHHHHHhcc
Confidence 566677887754 2 356889999999999998887 89998765332222 245666777777765533220
Q ss_pred ---CCCCC--cHHHHHHHHHHHHHHHHcCCC-CC------------------------Ccccccc-hhHHHHHHHHHHHh
Q 013959 320 ---SVFPS--DREFRDAAIEAGEVLWKNGLV-KK------------------------VGLADGA-AGNAYAFLSLYRLT 368 (433)
Q Consensus 320 ---~~~~~--~~~~~~~a~~a~~~~~~~g~~-~~------------------------~~LCHG~-aG~~~~Ll~~~~~t 368 (433)
..+.+ +++....++++++.+++.... .+ ++||-.. +|++.+|+ ....
T Consensus 230 ~~~~~~~~~~~~~~~~av~Rgi~~Ll~~Qe~~dGsw~rWg~qY~ygT~~Pa~aRsYE~psLs~~esa~il~~LM--~~~~ 307 (408)
T 1r76_A 230 DGFGFVPPAIRTRALEATNAAIHCIVETQVVQDGKRLGWGQQHDALTLRPTSARNFEPAALSSTESARILLFLM--EIEA 307 (408)
T ss_dssp TTCTTSCHHHHHHHHHHHHHHHHHHHHHSCEETTEECCCCSEECTTTCSBCCCSTTCCSCEEHHHHHHHHHHHT--TSSS
T ss_pred CcccccchhhhhhHHHHHHHHHHHHHHhhcccCCcccchhcccccccCcchhhhccCCccccHHHHHHHHHHHc--cCCC
Confidence 01110 125556677888887765422 11 1343221 22333332 3334
Q ss_pred CChHHHHHHHHHHHHHHhh
Q 013959 369 GETIYVERANAFSSFLYHN 387 (433)
Q Consensus 369 ~~~~~~~~a~~~~~~~~~~ 387 (433)
.++++.+.+++..+++...
T Consensus 308 ~~~~~~~aI~~Av~WL~s~ 326 (408)
T 1r76_A 308 PSDAVKQAIRGGVAWLNTS 326 (408)
T ss_dssp CCHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 6777888888888887663
No 28
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=74.04 E-value=24 Score=36.27 Aligned_cols=116 Identities=17% Similarity=0.203 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHHHHhccCCCCC-------CCCCC---C-------CCC---CCcccccccCChhHHHHHHHHhcCCC---
Q 013959 265 EDAEDVKGTLRYMMSNRFPQSG-------NYPVS---E-------GNP---RDKLVQWSHGATGVAITLCKASQVSV--- 321 (433)
Q Consensus 265 ~~~~~i~~~l~~l~~~~~~~~g-------nwp~~---~-------~~~---~~~~~~WChG~~Gi~l~~l~~~~~~~--- 321 (433)
+.++.++=.++|+++.+.+... .|+.. | ... ..+.+...-|+.=.+-++..+++ +
T Consensus 191 ~lldE~rWg~D~llkm~~~~g~~y~qVgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asr--vf~d 268 (586)
T 3h7l_A 191 RLIEEALFGADFLVRMQNEKGFFYMTVFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASR--LGVH 268 (586)
T ss_dssp HHHHHHHHHHHHHHHTBCTTSCBBCEEECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTT--SSSC
T ss_pred HHHHHHHHHHHHHHhcccCCCeEEEEecCCCCCCCCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhc--ccCC
Confidence 4577888888999887765222 24321 0 000 01111222232223335556666 6
Q ss_pred --CCCcHHHHHHHHHHHHHHHHc-C-CCCCCcccccchhH------HHHHHHHHHHhCChHHHHHHHHHHHHHHhhh
Q 013959 322 --FPSDREFRDAAIEAGEVLWKN-G-LVKKVGLADGAAGN------AYAFLSLYRLTGETIYVERANAFSSFLYHNA 388 (433)
Q Consensus 322 --~~~~~~~~~~a~~a~~~~~~~-g-~~~~~~LCHG~aG~------~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~ 388 (433)
++ .+++++.|+++.+-+.+. + .. .-|..|. +.+.+.+|+.|++++|++.|...++.+....
T Consensus 269 ~~~~-a~~~L~aA~~a~~fa~~~~~~y~-----~~g~~~~~De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~ 339 (586)
T 3h7l_A 269 GEYD-QQKYRNAAENGYWHLKEHNTQYL-----NDGEENIIDEYCALLASVELFKATKETRYLEESRLWAQRLVARQ 339 (586)
T ss_dssp SSSC-HHHHHHHHHHHHHHHHHHHHHHS-----TTSCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTE
T ss_pred CCcC-hHHHHHHHHHHHHHHHhcCcccc-----CCCCccchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 44 567788887776554332 1 11 1245565 3455779999999999999999888877644
No 29
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=72.84 E-value=23 Score=35.78 Aligned_cols=74 Identities=14% Similarity=0.048 Sum_probs=46.5
Q ss_pred ChHHHHHHHHHHHHHHHHhhhc-CCCCCCC--CCCC------CC---CCccccChHHHHHHHHHHhhhhCChHHHHHHHH
Q 013959 43 PCETFLKAAVSLKDQVVEVTWR-RGSGGGG--EPGR------GM---DPTLYTGLLGTAFICLRSYELTGNQQELLLSAE 110 (433)
Q Consensus 43 ~~~~~l~~A~~i~d~i~~~~~~-~~~~~~~--~~~~------~~---~~~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~ 110 (433)
.++.||+.|.++||.|+-. |. .+..... .+.. +. ..+.-.+.+.+.+=|.+|.++|||++|.+.|.+
T Consensus 122 ~d~~lL~kA~dLadrLlpA-Fd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r 200 (511)
T 1dl2_A 122 NKTVYLNKAIDLGDRLALA-FLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVER 200 (511)
T ss_dssp CHHHHHHHHHHHHHHHHGG-GGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHh-hcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHH
Confidence 4678999999999999976 44 4331110 0110 00 011111222234668999999999999999988
Q ss_pred HHHHHHH
Q 013959 111 IIDTCAS 117 (433)
Q Consensus 111 ~i~~~~~ 117 (433)
+.+.+.+
T Consensus 201 ~~~~l~~ 207 (511)
T 1dl2_A 201 VYEPLYK 207 (511)
T ss_dssp THHHHHH
T ss_pred HHHHHHh
Confidence 7776554
No 30
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=71.36 E-value=15 Score=37.29 Aligned_cols=73 Identities=12% Similarity=0.073 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCC--CCC--------CCCCCccccChHHHHHHHHHHhhhhCChHHHHHHHHHHHH
Q 013959 45 ETFLKAAVSLKDQVVEVTWRRGSGGGG--EPG--------RGMDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDT 114 (433)
Q Consensus 45 ~~~l~~A~~i~d~i~~~~~~~~~~~~~--~~~--------~~~~~~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~~i~~ 114 (433)
..||+.|.++||.|+-. |..+..... .+. .+.+.+.-.+.+.+.+=|.+|.++|||++|.+.|.++.+.
T Consensus 188 ~~lL~kA~dLadrLlpA-FdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd~~Y~~~a~r~~~~ 266 (538)
T 1x9d_A 188 SLFLRKAEDFGNRLMPA-FRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGDKKFQEAVEKVTQH 266 (538)
T ss_dssp HHHHHHHHHHHHHHGGG-GCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-hcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCCcHHHHHHHHHHHH
Confidence 47999999999999975 444331110 000 0011111122233346689999999999999999988887
Q ss_pred HHHH
Q 013959 115 CASV 118 (433)
Q Consensus 115 ~~~~ 118 (433)
+.+.
T Consensus 267 l~~~ 270 (538)
T 1x9d_A 267 IHGL 270 (538)
T ss_dssp HHTC
T ss_pred HHhc
Confidence 6653
No 31
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=71.25 E-value=22 Score=35.77 Aligned_cols=73 Identities=16% Similarity=0.068 Sum_probs=47.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhcCCCCCCC--CCCC---C---CCCccccChHHHHHHHHHHhhhhCChHHHHHHHHHHHHH
Q 013959 44 CETFLKAAVSLKDQVVEVTWRRGSGGGG--EPGR---G---MDPTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTC 115 (433)
Q Consensus 44 ~~~~l~~A~~i~d~i~~~~~~~~~~~~~--~~~~---~---~~~~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~~i~~~ 115 (433)
.+.||+.|.++||.|+-. |..+..... .+.. + ...+.-.+.+.+.+=|.+|.++|||++|.+.|.++.+.+
T Consensus 130 ~~~lL~kA~dLadrLlpA-FdTptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l 208 (503)
T 1hcu_A 130 VNSLLRQAQTLANGLKVA-FTTPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYL 208 (503)
T ss_dssp HHHHHHHHHHHHHHHGGG-GCSSSSCCCSEEECSSSCEECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHh-hcCCCCCCcceeecccCCCCCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHH
Confidence 468999999999999975 444331110 0110 0 111111223333466899999999999999999988877
Q ss_pred HH
Q 013959 116 AS 117 (433)
Q Consensus 116 ~~ 117 (433)
.+
T Consensus 209 ~~ 210 (503)
T 1hcu_A 209 LN 210 (503)
T ss_dssp HS
T ss_pred Hh
Confidence 65
No 32
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=69.24 E-value=36 Score=33.97 Aligned_cols=73 Identities=22% Similarity=0.139 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhcCCCCCCC--CCCC--CCCCccccChHHH---HHHHHHHhhhhCChHHHHHHHHHHHHHH
Q 013959 44 CETFLKAAVSLKDQVVEVTWRRGSGGGG--EPGR--GMDPTLYTGLLGT---AFICLRSYELTGNQQELLLSAEIIDTCA 116 (433)
Q Consensus 44 ~~~~l~~A~~i~d~i~~~~~~~~~~~~~--~~~~--~~~~~LY~G~~Gi---al~l~~L~~~t~~~~y~~~a~~~i~~~~ 116 (433)
.+.||+.|.++||.|+-. +..+..... .+.. +...+--+.++++ .+=|.+|.++|||++|.+.|.++.+.+.
T Consensus 117 ~~~lL~kA~dLadrLlpA-F~TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~ 195 (475)
T 2ri9_A 117 IDGLLDQSRNLADVLKFA-FDTPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLL 195 (475)
T ss_dssp HHHHHHHHHHHHHHHGGG-GCSSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHh-hcCCCCCCCceeecccCCCcCCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 468999999999999975 444331110 0111 0011111223443 4668999999999999999999888776
Q ss_pred H
Q 013959 117 S 117 (433)
Q Consensus 117 ~ 117 (433)
+
T Consensus 196 ~ 196 (475)
T 2ri9_A 196 K 196 (475)
T ss_dssp S
T ss_pred h
Confidence 5
No 33
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=66.91 E-value=24 Score=34.00 Aligned_cols=114 Identities=19% Similarity=0.245 Sum_probs=68.1
Q ss_pred HHHHHHHHH-hccCCCCCCCCCCCC-C-CCC--cccccccCChhHHHHHHHHhcCCCC---CCcHHHHHHHHHHHHHHHH
Q 013959 270 VKGTLRYMM-SNRFPQSGNYPVSEG-N-PRD--KLVQWSHGATGVAITLCKASQVSVF---PSDREFRDAAIEAGEVLWK 341 (433)
Q Consensus 270 i~~~l~~l~-~~~~~~~gnwp~~~~-~-~~~--~~~~WChG~~Gi~l~~l~~~~~~~~---~~~~~~~~~a~~a~~~~~~ 341 (433)
+..++.+.. ..+++..|.+....+ + ... ....|=+|- ++..+..+++ ++ + ++++++.|.++++.+.+
T Consensus 19 ~~~~l~~w~~~~~D~~~GGf~~~~~~dg~~~~~~k~l~~nar--~l~~~a~a~~--~~~~~~-~~~~l~~A~~~~~fl~~ 93 (402)
T 1fp3_A 19 LDRVMAFWLEHSHDREHGGFFTCLGRDGRVYDDLKYVWLQGR--QVWMYCRLYR--KLERFH-RPELLDAAKAGGEFLLR 93 (402)
T ss_dssp HHHHHHHHHHHSBCTTTSSBCCCBCTTSCBSCCCEEHHHHHH--HHHHHHHHHH--HCGGGC-CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCCCCCEeeEECCCCCCCCCccchhhhHH--HHHHHHHHHH--HhcccC-CHHHHHHHHHHHHHHHH
Confidence 567777776 466665555532211 1 000 001111111 1234444566 65 7 89999999999988776
Q ss_pred cCCCCCC--cccc----------------cchhHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhh
Q 013959 342 NGLVKKV--GLAD----------------GAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNA 388 (433)
Q Consensus 342 ~g~~~~~--~LCH----------------G~aG~~~~Ll~~~~~t~~~~~~~~a~~~~~~~~~~~ 388 (433)
....... ++++ +.+=.+..++.+++.|+++++++.|.++.+.+.+..
T Consensus 94 ~~~d~~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~ 158 (402)
T 1fp3_A 94 HARVAPPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWV 158 (402)
T ss_dssp HTBSSTTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred hccCcCCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 5321111 2332 233356677888999999999999999998887754
No 34
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=66.32 E-value=35 Score=34.11 Aligned_cols=72 Identities=15% Similarity=0.062 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCC--CCCC--------CCC--CccccChHHHHHHHHHHhhhhCChHHHHHHHHHH
Q 013959 45 ETFLKAAVSLKDQVVEVTWRRGSGGGG--EPGR--------GMD--PTLYTGLLGTAFICLRSYELTGNQQELLLSAEII 112 (433)
Q Consensus 45 ~~~l~~A~~i~d~i~~~~~~~~~~~~~--~~~~--------~~~--~~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~~i 112 (433)
+.|++.|.++||.|+-. +..+..... .+.+ +.+ .+.-.+.+.+.+=|.+|+++|||++|.+.|.++.
T Consensus 124 ~~lL~kA~dLad~LlpA-FdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~lTGd~~Y~~~a~~~~ 202 (478)
T 1nxc_A 124 EIFRKKAVELGVKLLPA-FHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAEKVMKIR 202 (478)
T ss_dssp HHHHHHHHHHHHHHGGG-GCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHHHCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-hcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHHHCChHHHHHHHHHH
Confidence 46899999999999975 444331110 0000 000 0111222223355889999999999999988877
Q ss_pred HHHHH
Q 013959 113 DTCAS 117 (433)
Q Consensus 113 ~~~~~ 117 (433)
+.+.+
T Consensus 203 ~~l~~ 207 (478)
T 1nxc_A 203 TVLNK 207 (478)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 65544
No 35
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=61.65 E-value=1.6e+02 Score=30.93 Aligned_cols=92 Identities=14% Similarity=0.168 Sum_probs=49.5
Q ss_pred chHHHHHHHHHHhHhCCCC--CchhhHHHHHHHHHhccccccccCCCCCccccccccccCCCccchhHHHHHHhcCCC--
Q 013959 187 RAGFLWAALFVNKHLGAGT--LPNELLMPIVDAVLAGGRAGATANTACPLMYRWHGTRYWGAANGLAGILQVLLHFPL-- 262 (433)
Q Consensus 187 ~aG~l~~Ll~l~~~~~~~~--~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aGI~~~L~~l~~-- 262 (433)
++-++.+|..+.+..+..+ .....+++.++.|.+.... ++ .|.+..-..+.+|++-.+.+|..++.
T Consensus 534 Ta~vL~aL~~~~~~~~~~~~~~~~~~i~rAv~yL~~~Q~~-----DG-----sW~g~wg~~~~Y~T~~al~AL~~aG~~~ 603 (732)
T 1w6k_A 534 TSAVMQALKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRA-----DG-----SWEGSWGVCFTYGTWFGLEAFACMGQTY 603 (732)
T ss_dssp HHHHHHHHHHHHHHCTTSSHHHHHHHHHHHHHHHHHHSCT-----TS-----CCCCSSBSSHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhccccccccchhhHHHHHHHHHHHHhhcCC-----CC-----CccCcCCCccchHHHHHHHHHHHhCCcc
Confidence 3344555555543322211 1123567777777754211 11 12221113345666666667777663
Q ss_pred -ChhHHHHHHHHHHHHHhccCCCCCCCC
Q 013959 263 -SEEDAEDVKGTLRYMMSNRFPQSGNYP 289 (433)
Q Consensus 263 -~~~~~~~i~~~l~~l~~~~~~~~gnwp 289 (433)
+....+.++++++|+++.+.+ +|.|.
T Consensus 604 ~~~~~~~~i~rav~~Lls~Q~~-DGGWg 630 (732)
T 1w6k_A 604 RDGTACAEVSRACDFLLSRQMA-DGGWG 630 (732)
T ss_dssp BTTBCCHHHHHHHHHHHTTCCT-TSCCC
T ss_pred cccchhHHHHHHHHHHHHhccc-CCCCC
Confidence 222236799999999998876 77885
No 36
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=48.72 E-value=49 Score=32.73 Aligned_cols=75 Identities=15% Similarity=0.098 Sum_probs=51.6
Q ss_pred HHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHcC-CCC--------C-CcccccchhHHHHHHHHHHHhCChHHHHHHH
Q 013959 309 VAITLCKASQVSVFPSDREFRDAAIEAGEVLWKNG-LVK--------K-VGLADGAAGNAYAFLSLYRLTGETIYVERAN 378 (433)
Q Consensus 309 i~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~g-~~~--------~-~~LCHG~aG~~~~Ll~~~~~t~~~~~~~~a~ 378 (433)
.++.+..++. +.+ |+++.+.+...+... ..| +.. + .+=|+ ..=.+.+++.+|+.|++++|++.|.
T Consensus 378 yll~~vra~~--~s~-D~~Lw~~~~~ma~~~-~lgdi~~~~~~~~~~~~~~~~~-sp~lL~allEL~~atq~~~~l~lA~ 452 (543)
T 2v8i_A 378 FLISYARAYA--IDN-DPLLWKVARGIANDQ-GLGDIGTAPGKEVKVNMDTTNS-DPYALFALLDLYHASQVADYRKLAE 452 (543)
T ss_dssp HHHHHHHHHH--HSC-CHHHHHHHHHHHHHT-TCEECTTBTTBSCEECTTCCCC-CHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred hhHHHHHHHH--cCC-CHHHHHHHHHHHhhC-CccccCCCcCcccccccCCCCc-CHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 6778888888 787 898888776544321 111 111 0 11121 2335788899999999999999999
Q ss_pred HHHHHHHhhh
Q 013959 379 AFSSFLYHNA 388 (433)
Q Consensus 379 ~~~~~~~~~~ 388 (433)
++++.++++.
T Consensus 453 ~~g~nl~~~~ 462 (543)
T 2v8i_A 453 KIGDNIIKIR 462 (543)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998743
No 37
>3a0o_A Oligo alginate lyase; alpha/alpha ballel+anti-parallel beta sheet; 2.11A {Agrobacterium tumefaciens} PDB: 3afl_A*
Probab=46.19 E-value=2.3e+02 Score=29.79 Aligned_cols=26 Identities=19% Similarity=0.152 Sum_probs=18.7
Q ss_pred HHHHHHHHhCChhHHHHHHHHHHHHH
Q 013959 138 IGAVVANRMGDRSRRDFFLNLFLEIA 163 (433)
Q Consensus 138 ~~~~l~~~~g~~~~~~~~~~~i~~~~ 163 (433)
.+...+.++||.++++.+.+.+.+..
T Consensus 214 ~la~ay~ltgd~kya~~a~~~L~~~~ 239 (776)
T 3a0o_A 214 HLAIAGRVLGRDDLLDASRKWLLAVA 239 (776)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 34556778899888888877766653
No 38
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=46.01 E-value=70 Score=30.21 Aligned_cols=139 Identities=12% Similarity=-0.045 Sum_probs=79.8
Q ss_pred cchHHHHHHHHHHhHhCCCCCchhhHHHHHHHHHhccccccccCCCCCcccc-cc-c-c---ccCCCccchhHHHH-HHh
Q 013959 186 GRAGFLWAALFVNKHLGAGTLPNELLMPIVDAVLAGGRAGATANTACPLMYR-WH-G-T---RYWGAANGLAGILQ-VLL 258 (433)
Q Consensus 186 G~aG~l~~Ll~l~~~~~~~~~l~~~i~~~~~~ll~~~~~~~~~~~~~~~~~~-~~-~-~---~~~G~aHG~aGI~~-~L~ 258 (433)
.++-.+.+|..++..++++.+ ++.+.+-++.|+.. ++.+ ..|. +. . . ..+-|+=.+++=++ +|.
T Consensus 75 dTa~vl~~Larv~~~~~~~~y-~~Ai~Rgl~wlL~m--Q~~n------GGWpqFdpd~~~Yl~~IpFnDDvtarvLelL~ 145 (332)
T 1gxm_A 75 ATITEMVFLAEVYKSGGNTKY-RDAVRKAANFLVNS--QYST------GALPQFYPLKGGYSDHATFNDNGMAYALTVLD 145 (332)
T ss_dssp TTHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHH--CCTT------SCCBSEESCCSGGGGSEECGGGHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhccccchHH-HHHHHHHHHHHHhc--cCCC------CCccccCCCcccccccCCcchHHHHHHHHHHH
Confidence 678888899888887665444 45777888888854 3221 1233 11 1 1 23555556666444 444
Q ss_pred cCC-----C-----C----hhHHHHHHHHHHHHHhccCCCCCCCCCCCC------------CCCCcccccc-cCChhHHH
Q 013959 259 HFP-----L-----S----EEDAEDVKGTLRYMMSNRFPQSGNYPVSEG------------NPRDKLVQWS-HGATGVAI 311 (433)
Q Consensus 259 ~l~-----~-----~----~~~~~~i~~~l~~l~~~~~~~~gnwp~~~~------------~~~~~~~~WC-hG~~Gi~l 311 (433)
.+. . . ++..+.++++++|+++.|.+ .|.|..... .+.-++.+.| +-+.||+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~Qe~-dggw~g~Wg~qydygT~~Pa~ARayE~psL~~~es~giv~ 224 (332)
T 1gxm_A 146 FAANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKAQWK-QNGVLTVWCAQHGALDYQPKKARAYELESLSGSESVGVLA 224 (332)
T ss_dssp HHHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHHSCE-ETTEECCCCSEECTTTCCBCCCSTTCCSSEETTTHHHHHH
T ss_pred HHHhccCCccccccccchhhhhHHHHHHHHHHHHHhhCc-cCCCcCeeccccccccccccccccccccchhHHHHHHHHH
Confidence 431 1 1 34567899999999998877 444543221 0111234666 33344544
Q ss_pred HHHHHhcCCCCCCcHHHHHHHHHHHHHHH
Q 013959 312 TLCKASQVSVFPSDREFRDAAIEAGEVLW 340 (433)
Q Consensus 312 ~~l~~~~~~~~~~~~~~~~~a~~a~~~~~ 340 (433)
. .+.. -. ++++++.+++|++.+.
T Consensus 225 ~--LM~~---~~-~~~v~~aI~~Av~WL~ 247 (332)
T 1gxm_A 225 F--LMTQ---PQ-TAEIEQAVRAGVAWFN 247 (332)
T ss_dssp H--HTTS---CC-CHHHHHHHHHHHHHHT
T ss_pred H--hccC---CC-CHHHHHHHHHHHHHHH
Confidence 3 3332 22 5888888888887543
No 39
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=41.05 E-value=26 Score=35.02 Aligned_cols=73 Identities=22% Similarity=0.294 Sum_probs=47.3
Q ss_pred HHHHHHhcCCCCCCcHHHHHHHHHHHHHHHH-----cCCC-----------CCCcc----cccchhHHH---HHHHHHHH
Q 013959 311 ITLCKASQVSVFPSDREFRDAAIEAGEVLWK-----NGLV-----------KKVGL----ADGAAGNAY---AFLSLYRL 367 (433)
Q Consensus 311 l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~-----~g~~-----------~~~~L----CHG~aG~~~---~Ll~~~~~ 367 (433)
=.++.++. ..+ ++.+++.|...++.++. .|+. .+++. |-..++.+. =|.+++++
T Consensus 112 GGLLSAy~--Lsg-d~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~l 188 (478)
T 1nxc_A 112 GGLLSAYY--LSG-EEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHL 188 (478)
T ss_dssp HHHHHHHH--HHC-CHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHH
T ss_pred hhhhhhhh--ccC-CHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHH
Confidence 35666777 666 89999998888887542 2221 11111 112233222 25789999
Q ss_pred hCChHHHHHHHHHHHHHHh
Q 013959 368 TGETIYVERANAFSSFLYH 386 (433)
Q Consensus 368 t~~~~~~~~a~~~~~~~~~ 386 (433)
|+|++|.+.|+++.+.+.+
T Consensus 189 TGd~~Y~~~a~~~~~~l~~ 207 (478)
T 1nxc_A 189 SGDPVFAEKVMKIRTVLNK 207 (478)
T ss_dssp HCCTHHHHHHHHHHHHHHH
T ss_pred HCChHHHHHHHHHHHHHHh
Confidence 9999999999998877654
No 40
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=41.01 E-value=36 Score=32.28 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=56.6
Q ss_pred CChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHcCCCCC---Ccccccchh--------------HHHHHHHHHHH
Q 013959 305 GATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWKNGLVKK---VGLADGAAG--------------NAYAFLSLYRL 367 (433)
Q Consensus 305 G~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~~~~---~~LCHG~aG--------------~~~~Ll~~~~~ 367 (433)
|+.=|+.+|+.+.+ ..+ ++.|.+++.+.++.+++..+... .-|.=|.-| ...+|..+++.
T Consensus 107 gDl~IA~ALl~A~~--~Wg-~~~Y~~~A~~il~~i~~~~v~~~~g~~~llPg~~gf~~~~~~~~npSY~~p~~~~~fa~~ 183 (334)
T 1wzz_A 107 GDLLIALALGRAGK--RFQ-RPDYIQDAMAIYGDVLNLMTMKAGPYVVLMPGAVGFTKKDSVILNLSYYVMPSLLQAFDL 183 (334)
T ss_dssp HHHHHHHHHHHHHH--HHT-CHHHHHHHHHHHHHHHHHHEEEETTEEEECSCSSSCBCSSEEEECGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HhC-CHHHHHHHHHHHHHHHHhcccCCCCeEEECCCcccccCCCCCeechhhcCHHHHHHHHHc
Confidence 44558899999999 888 89999999999998887654321 122234333 23667778888
Q ss_pred hCChHHHHHHHHHHHHHHh
Q 013959 368 TGETIYVERANAFSSFLYH 386 (433)
Q Consensus 368 t~~~~~~~~a~~~~~~~~~ 386 (433)
+++..|.+.+......+.+
T Consensus 184 ~~~~~W~~~~~~~~~ll~~ 202 (334)
T 1wzz_A 184 TADPRWRQVMEDGIRLVSA 202 (334)
T ss_dssp HCCTHHHHHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHH
Confidence 9998999888776665543
No 41
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=37.61 E-value=1.8e+02 Score=27.98 Aligned_cols=119 Identities=13% Similarity=0.164 Sum_probs=67.8
Q ss_pred CChhHHHHHHHHHHHHHhccCC-CCC--CCCCCCCCCCC--cccccccCChhHHHHHHHHhcCCCCCCcH---HHHHHHH
Q 013959 262 LSEEDAEDVKGTLRYMMSNRFP-QSG--NYPVSEGNPRD--KLVQWSHGATGVAITLCKASQVSVFPSDR---EFRDAAI 333 (433)
Q Consensus 262 ~~~~~~~~i~~~l~~l~~~~~~-~~g--nwp~~~~~~~~--~~~~WChG~~Gi~l~~l~~~~~~~~~~~~---~~~~~a~ 333 (433)
.++..++...+..+|..+.... ..+ .|.-. .+... ...+=-=|+.=|+.+|+.+.+ ..+ ++ .|.+++.
T Consensus 89 ~d~~d~~~FD~l~~wt~~~l~~~~~~L~aW~~~-~~g~~~~d~n~AtDgDl~IA~ALl~A~~--~Wg-~~g~~~Y~~~A~ 164 (386)
T 1v5d_A 89 YDSNAQKIYDGLFKTARTFKSSQNPNLMGWVVA-DSKKAQGHFDSATDGDLDIAYSLLLAHK--QWG-SNGTVNYLKEAQ 164 (386)
T ss_dssp TBTTHHHHHHHHHHHHHHTBCSSCTTSBCSEEC-SSGGGTTTSCCCHHHHHHHHHHHHHHHH--HHC-SSSSSCHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHhccCCCCCeEEEEC-CCCCcCCCCCCCCHHHHHHHHHHHHHHH--HcC-CCchHhHHHHHH
Confidence 3334557788888888775432 122 23110 00000 001111234448889999999 777 66 7999999
Q ss_pred HHHHHHHHcCCCCC-Ccccccc----hh--------HHHHHHHHHHHhCChHHHHHHHHHHHHH
Q 013959 334 EAGEVLWKNGLVKK-VGLADGA----AG--------NAYAFLSLYRLTGETIYVERANAFSSFL 384 (433)
Q Consensus 334 ~a~~~~~~~g~~~~-~~LCHG~----aG--------~~~~Ll~~~~~t~~~~~~~~a~~~~~~~ 384 (433)
+.++.+++..+... ..+--|. .+ ....|..+++.++++.|.+.+......+
T Consensus 165 ~il~~i~~~~~~~~~~~l~~g~~~~~~~~~~npSY~~p~~l~~f~~~~~~~~W~~v~~~~~~~l 228 (386)
T 1v5d_A 165 DMITKGIKASNVTNNNQLNLGDWDSKSSLDTRPSDWMMSHLRAFYEFTGDKTWLTVINNLYDVY 228 (386)
T ss_dssp HHHHHTHHHHHBCTTSSBCSSTTSCTTCCCBCGGGCCHHHHHHHHHHHCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCeeeecccCCCCCCeechhhccHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 99888776543211 1111111 01 1266778899999988988877655554
No 42
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=36.51 E-value=31 Score=34.97 Aligned_cols=73 Identities=19% Similarity=0.162 Sum_probs=48.3
Q ss_pred HHHHHhcCCCCCCcHHHHHHHHHHHHHHHH-----cCCCC-----------CC----cccccchhHHH-HHHHHHHHhCC
Q 013959 312 TLCKASQVSVFPSDREFRDAAIEAGEVLWK-----NGLVK-----------KV----GLADGAAGNAY-AFLSLYRLTGE 370 (433)
Q Consensus 312 ~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~-----~g~~~-----------~~----~LCHG~aG~~~-~Ll~~~~~t~~ 370 (433)
.++.++. ..+ ++.+++.|...++.++. .|+.. ++ .-|-..+|.+. =|.+++++|+|
T Consensus 177 GLLSAy~--Lsg-d~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTGd 253 (538)
T 1x9d_A 177 GLLSAYH--LSG-DSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTGD 253 (538)
T ss_dssp HHHHHHH--HHC-CHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHCC
T ss_pred hhhhHHH--hcC-CHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhCC
Confidence 5666666 666 89999998888877542 23211 01 12323333222 26789999999
Q ss_pred hHHHHHHHHHHHHHHhh
Q 013959 371 TIYVERANAFSSFLYHN 387 (433)
Q Consensus 371 ~~~~~~a~~~~~~~~~~ 387 (433)
++|.+.|+++.+.+.+.
T Consensus 254 ~~Y~~~a~r~~~~l~~~ 270 (538)
T 1x9d_A 254 KKFQEAVEKVTQHIHGL 270 (538)
T ss_dssp THHHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHhc
Confidence 99999999998887653
No 43
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=33.25 E-value=1.3e+02 Score=30.97 Aligned_cols=79 Identities=11% Similarity=0.031 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCcccccccCChhHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHcCC
Q 013959 265 EDAEDVKGTLRYMMSNRFPQSGNYPVSEGNPRDKLVQWSHGATGVAITLCKASQVSVFPSDREFRDAAIEAGEVLWKNGL 344 (433)
Q Consensus 265 ~~~~~i~~~l~~l~~~~~~~~gnwp~~~~~~~~~~~~WChG~~Gi~l~~l~~~~~~~~~~~~~~~~~a~~a~~~~~~~g~ 344 (433)
...+.++++++++.+.|.+ +|.|+.... +=+--.+|.++++..... . +++ ..++.++.+.....
T Consensus 10 ~~~~~~~~~~~~~~~~q~~-dG~w~~~~~-------~~~~~~~~~v~~~~~~~~---~--~~~---~~~~~~~yl~~~Q~ 73 (631)
T 2sqc_A 10 AYARTLDRAVEYLLSCQKD-EGYWWGPLL-------SNVTMEAEYVLLCHILDR---V--DRD---RMEKIRRYLLHEQR 73 (631)
T ss_dssp HHHHHHHHHHHHHHHHCCT-TSCCCCCEE-------CCTHHHHHHHHHHHHTTC---C--CHH---HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHhcCC-CCcccccCC-------CcchhhHHHHHHHHHhCC---C--CHH---HHHHHHHHHHHhcC
Confidence 3467899999999998887 899984221 112234555555544433 1 443 34444555555443
Q ss_pred CCC-CcccccchhHHH
Q 013959 345 VKK-VGLADGAAGNAY 359 (433)
Q Consensus 345 ~~~-~~LCHG~aG~~~ 359 (433)
..+ -++|++..|+..
T Consensus 74 ~dGgW~~~~~~~~~~~ 89 (631)
T 2sqc_A 74 EDGTWALYPGGPPDLD 89 (631)
T ss_dssp TTSCCCSSTTCCCCHH
T ss_pred CCCCccCCCCCCcchH
Confidence 333 688887665443
No 44
>1syq_B Talin 1; cytoskeleton, vinculin, cell adhesion; 2.42A {Homo sapiens}
Probab=30.84 E-value=30 Score=18.73 Aligned_cols=19 Identities=32% Similarity=0.520 Sum_probs=16.0
Q ss_pred ccHHHHHHHHHHccCcccC
Q 013959 408 QGLAGTACIWFDLLEPVNA 426 (433)
Q Consensus 408 ~G~aGig~~Llr~~~p~~~ 426 (433)
.|++|....|||-..|..+
T Consensus 7 kglagavsellrsaqpasa 25 (26)
T 1syq_B 7 KGLAGAVSELLRSAQPASA 25 (26)
T ss_dssp HHHHHHHHHHHHHTSCTTC
T ss_pred hHhHHHHHHHHHhcCcccc
Confidence 5899999999999888653
No 45
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=27.47 E-value=62 Score=30.60 Aligned_cols=41 Identities=12% Similarity=-0.032 Sum_probs=35.0
Q ss_pred CccccChHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHh
Q 013959 79 PTLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVV 119 (433)
Q Consensus 79 ~~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~~i~~~~~~~ 119 (433)
.+.-+|--=||+.|+..++..+++.|.+.|.++++.+.+..
T Consensus 102 n~AtDgDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~ 142 (334)
T 1wzz_A 102 NNATDGDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLM 142 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 45666666699999999999999999999999999888754
No 46
>3e7j_A Heparinase II protein; alpha and beta lyase, alpha6/alpha6 incomplete toroid, sugar protein, lyase; HET: NAG GCU GCD; 2.10A {Pedobacter heparinus} PDB: 3e80_A* 2fut_A* 2fuq_A*
Probab=25.94 E-value=1.4e+02 Score=31.65 Aligned_cols=19 Identities=0% Similarity=-0.366 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhHhCCCCCc
Q 013959 189 GFLWAALFVNKHLGAGTLP 207 (433)
Q Consensus 189 G~l~~Ll~l~~~~~~~~~l 207 (433)
--+..|...|..+++++++
T Consensus 83 ~rl~~LalAylLtgD~rya 101 (749)
T 3e7j_A 83 VRVELMALNYLMTKDPKVG 101 (749)
T ss_dssp HHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHhhcCCHHHH
Confidence 3355666677788887554
No 47
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=25.47 E-value=1.4e+02 Score=31.53 Aligned_cols=24 Identities=17% Similarity=0.393 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCC
Q 013959 266 DAEDVKGTLRYMMSNRFPQSGNYPV 290 (433)
Q Consensus 266 ~~~~i~~~l~~l~~~~~~~~gnwp~ 290 (433)
..+.++++++|+++.|.+ +|.|+.
T Consensus 479 ~~~~i~~av~wLls~Q~~-DGgw~a 502 (732)
T 1w6k_A 479 PRERLCDAVAVLLNMRNP-DGGFAT 502 (732)
T ss_dssp CHHHHHHHHHHHHTTCCT-TSCBCS
T ss_pred hHHHHHHHHHHHHHhcCC-CCCEEe
Confidence 467899999999998876 788864
No 48
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=25.04 E-value=74 Score=30.37 Aligned_cols=40 Identities=15% Similarity=0.059 Sum_probs=33.8
Q ss_pred ccccChHHHHHHHHHHhhhhCChHHHHHHHHHHHHHHHHh
Q 013959 80 TLYTGLLGTAFICLRSYELTGNQQELLLSAEIIDTCASVV 119 (433)
Q Consensus 80 ~LY~G~~Gial~l~~L~~~t~~~~y~~~a~~~i~~~~~~~ 119 (433)
+.-+|--=||+.|+..++..+++.|.+.|.++++.+.+..
T Consensus 92 sAtDGDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~I~~~~ 131 (355)
T 3qxf_A 92 SASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREE 131 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 4555656699999999999999999999999999887753
No 49
>1t01_B Talin 1; five helix bundle, cell adhesion, structural protein; 2.06A {Mus musculus}
Probab=23.69 E-value=38 Score=18.31 Aligned_cols=17 Identities=29% Similarity=0.519 Sum_probs=13.8
Q ss_pred ccHHHHHHHHHHccCcc
Q 013959 408 QGLAGTACIWFDLLEPV 424 (433)
Q Consensus 408 ~G~aGig~~Llr~~~p~ 424 (433)
.|++|....|||-+.|.
T Consensus 9 kglagavsellrsaqp~ 25 (26)
T 1t01_B 9 KGLAGAVSELLRSAQPX 25 (26)
T ss_dssp HHHHHHHHHHHHHHCC-
T ss_pred HHhHHHHHHHHHhcCCC
Confidence 58899999999988874
No 50
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=21.94 E-value=1.2e+02 Score=31.16 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=29.2
Q ss_pred ccchhHHHHHHhcCCC-ChhHHHHHHHHHHHHHhccCCCCCCCC
Q 013959 247 ANGLAGILQVLLHFPL-SEEDAEDVKGTLRYMMSNRFPQSGNYP 289 (433)
Q Consensus 247 aHG~aGI~~~L~~l~~-~~~~~~~i~~~l~~l~~~~~~~~gnwp 289 (433)
.--.+|.+.++.-++. ++ +.+++.++|+.+.|.+ +|.|.
T Consensus 40 ~~~~~~~v~~~~~~~~~~~---~~~~~~~~yl~~~Q~~-dGgW~ 79 (631)
T 2sqc_A 40 VTMEAEYVLLCHILDRVDR---DRMEKIRRYLLHEQRE-DGTWA 79 (631)
T ss_dssp THHHHHHHHHHHHTTCCCH---HHHHHHHHHHHHHSCT-TSCCC
T ss_pred chhhHHHHHHHHHhCCCCH---HHHHHHHHHHHHhcCC-CCCcc
Confidence 3356777777777664 44 6788999999998875 89995
No 51
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=21.42 E-value=6.2e+02 Score=25.29 Aligned_cols=116 Identities=17% Similarity=0.237 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHhccCCCCC---------CCCCC-CCCCCCcccccccC-----ChhHHHHHHHHhcCCCCCCc---
Q 013959 264 EEDAEDVKGTLRYMMSNRFPQSG---------NYPVS-EGNPRDKLVQWSHG-----ATGVAITLCKASQVSVFPSD--- 325 (433)
Q Consensus 264 ~~~~~~i~~~l~~l~~~~~~~~g---------nwp~~-~~~~~~~~~~WChG-----~~Gi~l~~l~~~~~~~~~~~--- 325 (433)
+..++.|+=.++|+++.+.++.| .|+.. ..++.....-+.+. +.-.+-++..++. +++ +
T Consensus 188 ~d~ldeikwg~D~llk~~~~~~g~~y~~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~--vf~-~~D~ 264 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQDPATGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAAL--VYR-PFDP 264 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBCTTTCCBBSEEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHH--HHT-TTCH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEEecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHH--hhc-ccCH
Q ss_pred ---HHHHHHHHHHHHHHHHcCC---CCCCcccccchh-------HHHHHHHHHHHhCChHHHHHHHHHHH
Q 013959 326 ---REFRDAAIEAGEVLWKNGL---VKKVGLADGAAG-------NAYAFLSLYRLTGETIYVERANAFSS 382 (433)
Q Consensus 326 ---~~~~~~a~~a~~~~~~~g~---~~~~~LCHG~aG-------~~~~Ll~~~~~t~~~~~~~~a~~~~~ 382 (433)
+++++.|+++.+-..+.-. .....-..|.-+ ...+-..+|+.|++++|++.+.....
T Consensus 265 ~yA~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~Del~wAA~~Ly~aTgd~~Yl~~a~~~~~ 334 (537)
T 3gzk_A 265 ALSSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDELLWASCALLRMTGDSAWARVCEPLLD 334 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHHHHHHHHHHHHHHCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchHHHHHHHHHHHHhCCHHHHHHHHHhhh
No 52
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=20.67 E-value=1.6e+02 Score=28.09 Aligned_cols=79 Identities=15% Similarity=0.199 Sum_probs=52.9
Q ss_pred CChhHHHHHHHHhcCCCCCCcH---HHHHHHHHHHHHHHHcCCCCC-Ccccccc--hh---------HHHHHHHHHHHhC
Q 013959 305 GATGVAITLCKASQVSVFPSDR---EFRDAAIEAGEVLWKNGLVKK-VGLADGA--AG---------NAYAFLSLYRLTG 369 (433)
Q Consensus 305 G~~Gi~l~~l~~~~~~~~~~~~---~~~~~a~~a~~~~~~~g~~~~-~~LCHG~--aG---------~~~~Ll~~~~~t~ 369 (433)
|+.=|+.+|+.+.+ ..+ ++ .|.+++.+.++.+++..+..+ .-|.-|. .+ ...+|..+++.++
T Consensus 121 gDl~IA~ALl~A~~--~W~-~~g~~~Y~~~A~~i~~~i~~~~~~~~~~~l~pg~~~~~~~~~npSY~~p~~~~~fa~~~~ 197 (363)
T 1kwf_A 121 ADEDIALALIFADK--LWG-SSGAINYGQEARTLINNLYNHCVEHGSYVLKPGDRWGGSSVTNPSYFAPAWYKVYAQYTG 197 (363)
T ss_dssp HHHHHHHHHHHHHH--HHC-SSSSSCHHHHHHHHHHHHHHHHBCTTTCCBCSBSSSCBTTBBCGGGCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH--HhC-CCcchhHHHHHHHHHHHHHHHhccCCCeEEeccccCCCCCEecchhcCHHHHHHHHHccC
Confidence 44458889999999 777 66 799999999888877644322 2233343 11 2455667788888
Q ss_pred ChHHHHHHHHHHHHHHh
Q 013959 370 ETIYVERANAFSSFLYH 386 (433)
Q Consensus 370 ~~~~~~~a~~~~~~~~~ 386 (433)
++.|.+.+....+.+.+
T Consensus 198 ~~~W~~~~~~~~~~l~~ 214 (363)
T 1kwf_A 198 DTRWNQVADKCYQIVEE 214 (363)
T ss_dssp CTHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHH
Confidence 88898887766555443
No 53
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=20.33 E-value=4.6e+02 Score=26.76 Aligned_cols=85 Identities=13% Similarity=0.041 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCCCCCCCCCccccChHH----HHHHHHHHhhhhCChHHHHHHHHHHHHHHHHhcc
Q 013959 46 TFLKAAVSLKDQVVEVTWRRGSGGGGEPGRGMDPTLYTGLLG----TAFICLRSYELTGNQQELLLSAEIIDTCASVVRD 121 (433)
Q Consensus 46 ~~l~~A~~i~d~i~~~~~~~~~~~~~~~~~~~~~~LY~G~~G----ial~l~~L~~~t~~~~y~~~a~~~i~~~~~~~~~ 121 (433)
.+++..++.+|.++.............+..-.+.++.-|... .++.++..++++++.+|++.|.+-|+.++-.
T Consensus 434 ~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~~WGs~~~~~n~a~~~~~a~~~~~~~~y~~~A~~qidYiLG~--- 510 (609)
T 1ut9_A 434 KARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGYPWGSNSFILNQMIVMGYAYDFTGDSKYLDGMFDGISYLLGR--- 510 (609)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSCCTTHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHBTC---
T ss_pred HHHHHHHHHHHHHHHhhccCCCCccccccccCCCCcccccCHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHhccCC---
Confidence 455556666677776532211100000000012334446443 3445555567889999999998777766642
Q ss_pred CCCcccccCcch
Q 013959 122 STRHVTFLCGRG 133 (433)
Q Consensus 122 ~~~~~~~~~G~~ 133 (433)
.+...|+..|.+
T Consensus 511 NP~~~SyVvG~G 522 (609)
T 1ut9_A 511 NAMDQSYVTGYG 522 (609)
T ss_dssp STTCCBCBBTCS
T ss_pred CCCCceEEEecC
Confidence 233567777754
Done!