Query 013962
Match_columns 433
No_of_seqs 257 out of 2716
Neff 10.8
Searched_HMMs 13730
Date Mon Mar 25 02:59:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013962.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/013962hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1veca_ c.37.1.19 (A:) DEAD bo 100.0 1.4E-36 1E-40 254.4 22.1 190 2-196 16-205 (206)
2 d2j0sa1 c.37.1.19 (A:22-243) P 100.0 4.1E-37 3E-41 259.2 18.0 191 2-198 30-220 (222)
3 d2bmfa2 c.37.1.14 (A:178-482) 100.0 1.1E-36 8.1E-41 274.1 15.6 272 23-348 6-299 (305)
4 d1t6na_ c.37.1.19 (A:) Spliceo 100.0 9.1E-36 6.7E-40 249.6 19.7 191 2-197 14-206 (207)
5 d2g9na1 c.37.1.19 (A:21-238) I 100.0 2.3E-35 1.7E-39 248.5 17.1 192 2-199 25-217 (218)
6 d1hv8a1 c.37.1.19 (A:3-210) Pu 100.0 1.7E-34 1.2E-38 242.6 19.9 189 2-198 17-206 (208)
7 d1wrba1 c.37.1.19 (A:164-401) 100.0 1.1E-33 8.3E-38 241.8 24.4 197 1-198 33-237 (238)
8 d1qdea_ c.37.1.19 (A:) Initiat 100.0 2.4E-34 1.7E-38 241.5 19.2 189 2-197 23-211 (212)
9 d1s2ma1 c.37.1.19 (A:46-251) P 100.0 1.9E-33 1.4E-37 236.1 19.4 191 2-198 14-204 (206)
10 d1q0ua_ c.37.1.19 (A:) Probabl 100.0 6.7E-32 4.9E-36 227.9 17.0 192 2-198 14-208 (209)
11 d1s2ma2 c.37.1.19 (A:252-422) 100.0 1.2E-28 9E-33 199.4 19.2 150 205-363 4-153 (171)
12 d1fuka_ c.37.1.19 (A:) Initiat 100.0 1.1E-28 8.2E-33 197.0 18.0 146 209-363 2-148 (162)
13 d1hv8a2 c.37.1.19 (A:211-365) 100.0 1.2E-28 8.6E-33 196.2 18.0 147 206-362 2-148 (155)
14 d2j0sa2 c.37.1.19 (A:244-411) 100.0 1.1E-28 7.7E-33 198.2 17.5 150 204-362 4-154 (168)
15 d1oywa3 c.37.1.19 (A:207-406) 100.0 1.4E-27 1E-31 196.8 16.9 134 216-358 13-146 (200)
16 d2p6ra3 c.37.1.19 (A:1-202) He 99.9 5.9E-28 4.3E-32 202.3 13.7 176 3-193 17-195 (202)
17 d1t5ia_ c.37.1.19 (A:) Spliceo 99.9 3E-27 2.2E-31 190.1 16.5 145 208-361 2-147 (168)
18 d2rb4a1 c.37.1.19 (A:307-474) 99.9 1.8E-26 1.3E-30 185.4 18.2 149 205-362 3-158 (168)
19 d1wp9a1 c.37.1.19 (A:1-200) pu 99.9 3E-26 2.2E-30 191.9 19.9 167 8-184 6-172 (200)
20 d1c4oa2 c.37.1.19 (A:410-583) 99.9 3E-26 2.2E-30 181.2 17.2 128 218-353 14-146 (174)
21 d1oywa2 c.37.1.19 (A:1-206) Re 99.9 6.8E-27 4.9E-31 196.6 14.1 172 6-194 20-202 (206)
22 d1gkub1 c.37.1.16 (B:1-250) He 99.9 1.7E-27 1.2E-31 204.7 7.1 168 4-185 36-221 (237)
23 d1t5la2 c.37.1.19 (A:415-595) 99.9 2.2E-25 1.6E-29 179.7 15.7 127 218-352 14-145 (181)
24 d1jr6a_ c.37.1.14 (A:) HCV hel 99.9 3.7E-23 2.7E-27 158.6 7.3 99 242-350 35-137 (138)
25 d2eyqa3 c.37.1.19 (A:546-778) 99.9 2.1E-21 1.6E-25 161.5 18.6 158 11-187 55-222 (233)
26 d2fz4a1 c.37.1.19 (A:24-229) D 99.9 1.8E-22 1.3E-26 168.5 11.9 136 11-178 70-205 (206)
27 d1gm5a3 c.37.1.19 (A:286-549) 99.9 1.8E-21 1.3E-25 165.2 16.1 161 7-187 80-250 (264)
28 d1rifa_ c.37.1.23 (A:) DNA hel 99.9 2.3E-22 1.7E-26 175.3 10.4 153 11-181 113-265 (282)
29 d1wp9a2 c.37.1.19 (A:201-486) 99.8 5.1E-21 3.7E-25 168.6 13.7 128 219-352 143-278 (286)
30 d2eyqa5 c.37.1.19 (A:779-989) 99.8 9.6E-20 7E-24 146.8 18.3 155 223-384 19-179 (211)
31 d1gm5a4 c.37.1.19 (A:550-755) 99.8 2.6E-21 1.9E-25 158.0 8.4 134 218-358 12-157 (206)
32 d2p6ra4 c.37.1.19 (A:203-403) 99.8 6E-21 4.3E-25 157.4 10.2 111 242-352 40-189 (201)
33 d1yksa1 c.37.1.14 (A:185-324) 99.8 3.4E-20 2.5E-24 145.3 8.1 136 23-179 4-140 (140)
34 d2fwra1 c.37.1.19 (A:257-456) 99.8 4.6E-20 3.4E-24 153.2 6.4 95 241-340 92-186 (200)
35 d1a1va1 c.37.1.14 (A:190-325) 99.8 2.5E-19 1.8E-23 139.2 9.6 128 25-178 7-136 (136)
36 d1a1va2 c.37.1.14 (A:326-624) 99.8 2.3E-19 1.7E-23 151.2 5.8 104 243-347 37-153 (299)
37 d1gkub2 c.37.1.16 (B:251-498) 99.7 1.3E-19 9.3E-24 155.7 -1.9 103 243-355 26-133 (248)
38 d1z3ix2 c.37.1.19 (X:92-389) R 99.7 4.8E-16 3.5E-20 137.1 19.0 161 11-180 55-232 (298)
39 d1z3ix1 c.37.1.19 (X:390-735) 99.6 1.6E-15 1.2E-19 135.0 15.5 110 241-350 117-229 (346)
40 d1tf5a4 c.37.1.19 (A:396-570) 99.6 1.4E-15 9.8E-20 118.2 12.6 131 212-351 11-149 (175)
41 d1z5za1 c.37.1.19 (A:663-906) 99.6 1.2E-15 8.4E-20 130.4 12.4 123 217-346 67-192 (244)
42 d1z63a1 c.37.1.19 (A:432-661) 99.6 2.5E-15 1.8E-19 127.3 10.7 154 7-181 7-165 (230)
43 d1tf5a3 c.37.1.19 (A:1-226,A:3 99.5 7.4E-14 5.4E-18 115.4 15.5 165 12-190 79-264 (273)
44 d1nkta3 c.37.1.19 (A:-15-225,A 99.5 8.9E-14 6.5E-18 115.4 12.8 164 12-189 96-278 (288)
45 d1yksa2 c.37.1.14 (A:325-623) 99.5 2.5E-14 1.8E-18 123.4 9.8 100 243-347 37-155 (299)
46 d1nkta4 c.37.1.19 (A:397-615) 99.4 8.1E-13 5.9E-17 104.0 13.2 134 211-353 10-195 (219)
47 d1w36d1 c.37.1.19 (D:2-360) Ex 98.6 1.8E-07 1.3E-11 82.8 12.8 146 9-177 146-297 (359)
48 d1uaaa1 c.37.1.19 (A:2-307) DE 98.1 3.6E-06 2.6E-10 73.1 8.2 70 11-86 1-70 (306)
49 d1pjra1 c.37.1.19 (A:1-318) DE 97.8 1.2E-05 9E-10 70.1 7.3 72 9-86 9-80 (318)
50 d1a5ta2 c.37.1.20 (A:1-207) de 97.6 8.5E-05 6.2E-09 59.9 8.7 40 12-52 3-49 (207)
51 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 97.3 0.00033 2.4E-08 66.9 9.3 74 8-87 8-81 (623)
52 d1ls1a2 c.37.1.10 (A:89-295) G 97.3 0.0012 8.8E-08 52.5 11.0 131 29-190 13-146 (207)
53 d1l8qa2 c.37.1.20 (A:77-289) C 97.2 0.0008 5.9E-08 54.2 9.4 102 28-179 38-141 (213)
54 d2qy9a2 c.37.1.10 (A:285-495) 97.2 0.0025 1.8E-07 50.6 11.6 132 29-189 12-150 (211)
55 d1t5la1 c.37.1.19 (A:2-414) Nu 97.1 0.00042 3.1E-08 61.5 7.2 65 12-87 12-81 (413)
56 d2gnoa2 c.37.1.20 (A:11-208) g 97.1 0.0024 1.7E-07 50.6 10.7 114 16-179 2-120 (198)
57 d1gm5a3 c.37.1.19 (A:286-549) 97.0 0.00075 5.4E-08 55.9 7.7 88 243-332 133-225 (264)
58 d2eyqa3 c.37.1.19 (A:546-778) 97.0 0.0057 4.2E-07 49.3 12.4 109 213-330 82-195 (233)
59 d1okkd2 c.37.1.10 (D:97-303) G 96.8 0.0076 5.5E-07 47.7 11.7 132 27-189 7-147 (207)
60 d2b8ta1 c.37.1.24 (A:11-149) T 96.8 0.0021 1.5E-07 47.5 7.4 88 29-150 5-92 (139)
61 d2eyqa5 c.37.1.19 (A:779-989) 96.7 0.0022 1.6E-07 50.5 7.2 91 62-165 31-125 (211)
62 d1sxjb2 c.37.1.20 (B:7-230) Re 96.6 0.0016 1.2E-07 53.0 6.4 43 136-179 100-142 (224)
63 d1j8yf2 c.37.1.10 (F:87-297) G 96.6 0.0094 6.9E-07 47.2 10.7 54 136-189 93-149 (211)
64 d1sxjc2 c.37.1.20 (C:12-238) R 96.5 0.0028 2.1E-07 51.5 7.6 41 134-175 96-136 (227)
65 d1iqpa2 c.37.1.20 (A:2-232) Re 96.5 0.0043 3.1E-07 50.5 8.5 42 136-178 108-149 (231)
66 d1xbta1 c.37.1.24 (A:18-150) T 96.4 0.0023 1.7E-07 46.9 5.6 37 29-73 5-41 (133)
67 d1njfa_ c.37.1.20 (A:) delta p 96.4 0.0082 5.9E-07 49.1 9.6 41 136-177 114-154 (239)
68 d1sxje2 c.37.1.20 (E:4-255) Re 96.4 0.00073 5.3E-08 56.1 3.0 40 136-176 130-169 (252)
69 d1ixza_ c.37.1.20 (A:) AAA dom 96.4 0.0052 3.8E-07 50.4 8.1 17 27-43 43-59 (247)
70 d1vmaa2 c.37.1.10 (A:82-294) G 96.3 0.036 2.6E-06 43.9 12.5 131 29-189 14-152 (213)
71 d1xx6a1 c.37.1.24 (A:2-142) Th 96.2 0.007 5.1E-07 44.6 7.0 37 29-73 10-46 (141)
72 d1d2na_ c.37.1.20 (A:) Hexamer 96.0 0.025 1.8E-06 46.2 10.6 16 28-43 42-57 (246)
73 d1sxjd2 c.37.1.20 (D:26-262) R 95.8 0.02 1.5E-06 46.4 9.0 42 137-179 108-149 (237)
74 d1jbka_ c.37.1.20 (A:) ClpB, A 95.8 0.02 1.4E-06 44.5 8.3 120 26-147 43-186 (195)
75 d1r6bx2 c.37.1.20 (X:169-436) 95.7 0.024 1.7E-06 46.7 9.0 26 27-53 40-65 (268)
76 d1c4oa1 c.37.1.19 (A:2-409) Nu 95.6 0.02 1.4E-06 50.5 8.7 66 11-87 8-78 (408)
77 d1g6oa_ c.37.1.11 (A:) Hexamer 95.6 0.0038 2.7E-07 53.5 3.7 52 14-74 153-205 (323)
78 d1p9ra_ c.37.1.11 (A:) Extrace 95.5 0.0098 7.2E-07 52.6 6.2 40 12-52 142-183 (401)
79 d1e32a2 c.37.1.20 (A:201-458) 95.1 0.073 5.3E-06 43.7 10.3 17 27-43 39-55 (258)
80 d1qvra2 c.37.1.20 (A:149-535) 94.8 0.17 1.2E-05 44.0 12.4 121 26-148 43-186 (387)
81 d1c4oa2 c.37.1.19 (A:410-583) 94.6 0.075 5.5E-06 40.3 8.2 76 62-148 31-110 (174)
82 d2i3ba1 c.37.1.11 (A:1-189) Ca 94.5 0.023 1.6E-06 43.9 5.3 27 27-54 2-28 (189)
83 d1ofha_ c.37.1.20 (A:) HslU {H 94.2 0.012 9.1E-07 50.0 3.2 18 26-43 49-66 (309)
84 d1g41a_ c.37.1.20 (A:) HslU {H 93.5 0.015 1.1E-06 51.9 2.7 18 26-43 49-66 (443)
85 d1g5ta_ c.37.1.11 (A:) ATP:cor 93.4 0.081 5.9E-06 39.3 6.2 135 28-185 4-144 (157)
86 d1fuka_ c.37.1.19 (A:) Initiat 93.2 0.44 3.2E-05 35.5 10.3 72 62-144 27-102 (162)
87 d1fnna2 c.37.1.20 (A:1-276) CD 93.1 0.06 4.4E-06 44.3 5.7 25 27-52 44-68 (276)
88 d1t5la2 c.37.1.19 (A:415-595) 92.9 0.34 2.4E-05 36.9 9.3 76 62-148 31-110 (181)
89 d1e9ra_ c.37.1.11 (A:) Bacteri 92.7 0.059 4.3E-06 48.0 5.5 43 25-75 49-91 (433)
90 d1um8a_ c.37.1.20 (A:) ClpX {H 92.7 0.03 2.2E-06 48.6 3.2 17 27-43 69-85 (364)
91 d1cr2a_ c.37.1.11 (A:) Gene 4 92.4 0.062 4.5E-06 44.6 4.9 57 20-84 29-85 (277)
92 d1w36b1 c.37.1.19 (B:1-485) Ex 92.3 0.16 1.2E-05 45.6 8.0 61 26-86 16-80 (485)
93 d1kaga_ c.37.1.2 (A:) Shikimat 92.1 0.046 3.4E-06 41.0 3.4 19 26-44 2-20 (169)
94 d1in4a2 c.37.1.20 (A:17-254) H 92.1 0.075 5.5E-06 42.9 4.9 18 27-44 36-53 (238)
95 d1tf7a2 c.37.1.11 (A:256-497) 91.9 0.073 5.3E-06 43.0 4.6 38 26-71 26-63 (242)
96 d1np6a_ c.37.1.10 (A:) Molybdo 91.3 0.11 7.8E-06 39.1 4.7 34 29-70 5-38 (170)
97 d1hv8a2 c.37.1.19 (A:211-365) 91.3 0.82 6E-05 33.6 9.8 71 62-143 28-102 (155)
98 d1tf7a1 c.37.1.11 (A:14-255) C 91.2 0.091 6.6E-06 42.2 4.5 40 25-71 25-64 (242)
99 d1ly1a_ c.37.1.1 (A:) Polynucl 91.0 0.047 3.4E-06 40.5 2.2 16 28-43 4-19 (152)
100 d1oywa3 c.37.1.19 (A:207-406) 90.9 0.92 6.7E-05 35.0 10.0 71 62-143 30-104 (200)
101 d1ixsb2 c.37.1.20 (B:4-242) Ho 90.8 0.065 4.7E-06 43.3 3.1 18 27-44 36-53 (239)
102 d1s2ma2 c.37.1.19 (A:252-422) 90.5 1.1 8.2E-05 33.4 10.0 74 62-146 32-109 (171)
103 d1lv7a_ c.37.1.20 (A:) AAA dom 90.5 0.15 1.1E-05 41.6 5.0 18 27-44 46-63 (256)
104 d1rkba_ c.37.1.1 (A:) Adenylat 90.3 0.14 9.9E-06 38.6 4.4 18 27-44 5-22 (173)
105 d2bdta1 c.37.1.25 (A:1-176) Hy 90.0 0.062 4.5E-06 40.7 2.2 16 28-43 4-19 (176)
106 d1gvnb_ c.37.1.21 (B:) Plasmid 89.8 0.092 6.7E-06 43.2 3.3 16 28-43 34-49 (273)
107 d1sxja2 c.37.1.20 (A:295-547) 89.7 0.15 1.1E-05 41.4 4.5 23 27-50 53-75 (253)
108 d1zp6a1 c.37.1.25 (A:6-181) Hy 89.7 0.072 5.2E-06 40.5 2.4 19 25-43 3-21 (176)
109 d2fnaa2 c.37.1.20 (A:1-283) Ar 89.6 0.38 2.7E-05 39.3 7.1 18 26-43 29-46 (283)
110 d1y63a_ c.37.1.1 (A:) Probable 89.4 0.081 5.9E-06 40.1 2.4 17 27-43 6-22 (174)
111 d1lw7a2 c.37.1.1 (A:220-411) T 89.0 0.14 9.9E-06 39.2 3.6 17 27-43 8-24 (192)
112 d1hv8a1 c.37.1.19 (A:3-210) Pu 88.7 0.68 4.9E-05 36.1 7.7 74 240-318 70-153 (208)
113 d1khta_ c.37.1.1 (A:) Adenylat 88.7 0.19 1.4E-05 38.3 4.2 25 27-52 2-26 (190)
114 d1qhxa_ c.37.1.3 (A:) Chloramp 88.5 0.1 7.5E-06 39.5 2.5 18 26-43 3-20 (178)
115 d2j0sa2 c.37.1.19 (A:244-411) 88.4 3.4 0.00025 30.6 11.2 94 29-143 11-108 (168)
116 d1byia_ c.37.1.10 (A:) Dethiob 88.4 0.18 1.3E-05 39.8 4.0 35 27-69 2-37 (224)
117 d1yksa2 c.37.1.14 (A:325-623) 88.2 0.39 2.9E-05 39.8 6.1 69 62-142 36-104 (299)
118 d1svma_ c.37.1.20 (A:) Papillo 88.0 0.37 2.7E-05 41.3 6.0 24 26-50 154-177 (362)
119 d1bg2a_ c.37.1.9 (A:) Kinesin 87.9 0.17 1.2E-05 42.9 3.7 24 20-43 68-93 (323)
120 d1u94a1 c.37.1.11 (A:6-268) Re 87.7 0.19 1.4E-05 41.0 3.8 53 19-79 41-99 (263)
121 d1jr6a_ c.37.1.14 (A:) HCV hel 87.7 0.26 1.9E-05 35.6 4.2 66 62-142 35-100 (138)
122 d1xjca_ c.37.1.10 (A:) Molybdo 87.5 0.32 2.3E-05 36.3 4.8 33 29-69 4-36 (165)
123 d1ye8a1 c.37.1.11 (A:1-178) Hy 87.3 0.19 1.3E-05 38.1 3.3 41 136-177 98-138 (178)
124 d2eyqa2 c.37.1.19 (A:349-465) 87.2 0.23 1.6E-05 34.8 3.4 64 243-318 35-98 (117)
125 d1n0wa_ c.37.1.11 (A:) DNA rep 87.1 0.17 1.2E-05 40.0 3.1 23 26-48 23-45 (242)
126 d1viaa_ c.37.1.2 (A:) Shikimat 87.1 0.19 1.4E-05 37.6 3.1 17 27-43 1-17 (161)
127 d1pzna2 c.37.1.11 (A:96-349) D 87.0 0.2 1.4E-05 40.5 3.5 24 26-49 36-59 (254)
128 d1r7ra3 c.37.1.20 (A:471-735) 86.9 0.23 1.7E-05 40.6 3.9 18 26-43 41-58 (265)
129 d1v8ka_ c.37.1.9 (A:) Kinesin 86.8 0.19 1.4E-05 43.3 3.4 24 21-44 107-132 (362)
130 d2rb4a1 c.37.1.19 (A:307-474) 86.7 2 0.00014 31.9 8.9 71 62-143 32-106 (168)
131 d1knqa_ c.37.1.17 (A:) Glucona 86.6 0.14 1E-05 38.5 2.2 17 28-44 8-24 (171)
132 d1m8pa3 c.37.1.15 (A:391-573) 86.5 0.15 1.1E-05 38.7 2.3 26 25-51 5-30 (183)
133 d1szpa2 c.37.1.11 (A:145-395) 86.4 0.16 1.1E-05 40.9 2.5 22 25-46 33-54 (251)
134 d1e6ca_ c.37.1.2 (A:) Shikimat 86.3 0.38 2.8E-05 36.1 4.6 18 27-44 3-20 (170)
135 d1goja_ c.37.1.9 (A:) Kinesin 86.3 0.24 1.7E-05 42.6 3.7 23 21-43 73-97 (354)
136 d1t5ia_ c.37.1.19 (A:) Spliceo 85.7 2.6 0.00019 31.2 9.2 73 62-145 27-103 (168)
137 d1yrba1 c.37.1.10 (A:1-244) AT 85.5 0.37 2.7E-05 38.5 4.5 22 29-51 3-24 (244)
138 d1v5wa_ c.37.1.11 (A:) Meiotic 85.5 0.34 2.5E-05 39.0 4.2 56 26-83 37-92 (258)
139 d1htwa_ c.37.1.18 (A:) Hypothe 85.4 0.17 1.3E-05 37.5 2.0 37 29-76 36-72 (158)
140 d1sdma_ c.37.1.9 (A:) Kinesin 85.3 0.23 1.7E-05 42.8 3.2 24 20-43 67-92 (364)
141 d1zina1 c.37.1.1 (A:1-125,A:16 85.2 0.23 1.6E-05 37.8 2.8 17 28-44 2-18 (182)
142 d1yj5a2 c.37.1.1 (A:351-522) 5 85.1 0.19 1.4E-05 38.0 2.2 15 28-42 16-30 (172)
143 d1zaka1 c.37.1.1 (A:3-127,A:15 85.0 0.23 1.7E-05 38.2 2.8 17 28-44 5-21 (189)
144 d2zfia1 c.37.1.9 (A:4-352) Kin 85.0 0.3 2.2E-05 41.8 3.7 23 21-43 80-104 (349)
145 d1g8pa_ c.37.1.20 (A:) ATPase 85.0 0.13 9.5E-06 43.9 1.3 18 25-42 27-44 (333)
146 d1x88a1 c.37.1.9 (A:18-362) Ki 84.9 0.26 1.9E-05 42.1 3.3 24 20-43 73-98 (345)
147 d1mo6a1 c.37.1.11 (A:1-269) Re 84.8 0.47 3.4E-05 38.6 4.7 55 19-81 47-107 (269)
148 d2cdna1 c.37.1.1 (A:1-181) Ade 84.7 0.25 1.8E-05 37.6 2.8 18 28-45 2-19 (181)
149 d2ncda_ c.37.1.9 (A:) Kinesin 84.6 0.26 1.9E-05 42.5 3.2 25 19-43 116-142 (368)
150 d1s3ga1 c.37.1.1 (A:1-125,A:16 84.5 0.27 1.9E-05 37.5 2.9 17 28-44 2-18 (182)
151 d1ak2a1 c.37.1.1 (A:14-146,A:1 84.5 0.29 2.1E-05 37.6 3.1 19 26-44 3-21 (190)
152 d1x6va3 c.37.1.4 (A:34-228) Ad 84.2 0.14 1E-05 39.6 1.0 17 28-44 21-37 (195)
153 d1f9va_ c.37.1.9 (A:) Kinesin 84.1 0.36 2.6E-05 41.1 3.8 25 20-44 75-101 (342)
154 d3adka_ c.37.1.1 (A:) Adenylat 83.9 0.35 2.5E-05 37.3 3.4 22 23-44 5-26 (194)
155 d1ny5a2 c.37.1.20 (A:138-384) 83.7 0.34 2.5E-05 39.1 3.3 23 21-43 18-40 (247)
156 d1e4va1 c.37.1.1 (A:1-121,A:15 83.6 0.27 2E-05 37.3 2.5 16 28-43 2-17 (179)
157 d1ukza_ c.37.1.1 (A:) Uridylat 83.5 0.31 2.2E-05 37.7 2.9 17 28-44 10-26 (196)
158 d1lvga_ c.37.1.1 (A:) Guanylat 83.4 1.1 8.1E-05 34.2 6.2 15 29-43 3-17 (190)
159 d1qf9a_ c.37.1.1 (A:) UMP/CMP 83.4 0.29 2.1E-05 37.7 2.7 17 28-44 8-24 (194)
160 d2ak3a1 c.37.1.1 (A:0-124,A:16 83.3 0.31 2.3E-05 37.5 2.8 17 28-44 8-24 (189)
161 d1teva_ c.37.1.1 (A:) UMP/CMP 82.6 0.36 2.6E-05 37.1 2.9 16 29-44 4-19 (194)
162 d1akya1 c.37.1.1 (A:3-130,A:16 82.4 0.65 4.7E-05 35.1 4.4 17 28-44 4-20 (180)
163 d2j0sa1 c.37.1.19 (A:22-243) P 82.4 2.4 0.00017 33.2 7.9 73 241-317 84-166 (222)
164 d1w5sa2 c.37.1.20 (A:7-293) CD 82.4 0.22 1.6E-05 40.9 1.7 23 29-52 49-71 (287)
165 d1nksa_ c.37.1.1 (A:) Adenylat 81.9 0.59 4.3E-05 35.5 4.0 34 29-70 4-37 (194)
166 d2i1qa2 c.37.1.11 (A:65-322) D 81.1 0.33 2.4E-05 38.9 2.3 26 26-51 34-59 (258)
167 d1nlfa_ c.37.1.11 (A:) Hexamer 81.0 0.82 6E-05 37.2 4.9 65 20-86 23-90 (274)
168 d2iyva1 c.37.1.2 (A:2-166) Shi 81.0 0.47 3.4E-05 35.4 3.0 17 28-44 3-19 (165)
169 d1znwa1 c.37.1.1 (A:20-201) Gu 80.7 0.38 2.7E-05 36.6 2.4 17 26-42 2-18 (182)
170 d1gkya_ c.37.1.1 (A:) Guanylat 80.5 0.4 2.9E-05 36.7 2.5 16 27-42 2-17 (186)
171 d1xp8a1 c.37.1.11 (A:15-282) R 79.7 0.73 5.3E-05 37.5 3.9 53 19-79 44-102 (268)
172 d1s96a_ c.37.1.1 (A:) Guanylat 79.6 0.45 3.2E-05 37.1 2.5 17 26-42 2-18 (205)
173 d1rz3a_ c.37.1.6 (A:) Hypothet 79.2 0.38 2.8E-05 36.9 2.0 15 29-43 25-39 (198)
174 d1r6bx3 c.37.1.20 (X:437-751) 79.0 0.49 3.6E-05 39.7 2.8 17 28-44 54-70 (315)
175 d1ry6a_ c.37.1.9 (A:) Kinesin 78.9 0.61 4.5E-05 39.4 3.4 20 25-44 82-103 (330)
176 d1bifa1 c.37.1.7 (A:37-249) 6- 78.3 1.2 8.5E-05 34.4 4.8 22 29-51 5-26 (213)
177 d1knxa2 c.91.1.2 (A:133-309) H 77.1 0.58 4.2E-05 35.3 2.3 20 25-44 14-33 (177)
178 d1uj2a_ c.37.1.6 (A:) Uridine- 76.8 0.53 3.8E-05 36.8 2.2 15 29-43 5-19 (213)
179 d1kgda_ c.37.1.1 (A:) Guanylat 75.9 0.66 4.8E-05 35.1 2.4 16 27-42 4-19 (178)
180 d1w44a_ c.37.1.11 (A:) NTPase 75.4 0.5 3.7E-05 39.5 1.7 17 28-44 125-141 (321)
181 d1kkma_ c.91.1.2 (A:) HPr kina 74.8 0.81 5.9E-05 34.4 2.6 20 25-44 13-32 (176)
182 d1qvra3 c.37.1.20 (A:536-850) 74.7 0.71 5.2E-05 38.7 2.5 17 28-44 55-71 (315)
183 d1gkub1 c.37.1.16 (B:1-250) He 74.4 3.2 0.00023 32.6 6.5 73 242-316 86-168 (237)
184 d1ckea_ c.37.1.1 (A:) CMP kina 74.1 0.89 6.5E-05 35.5 2.9 16 29-44 6-21 (225)
185 d2pmka1 c.37.1.12 (A:467-707) 73.9 0.71 5.2E-05 36.9 2.2 17 25-41 28-44 (241)
186 d1xpua3 c.37.1.11 (A:129-417) 73.3 1.7 0.00012 35.5 4.4 29 17-45 31-62 (289)
187 d1ko7a2 c.91.1.2 (A:130-298) H 73.0 0.87 6.3E-05 34.0 2.4 19 25-43 14-32 (169)
188 d1sgwa_ c.37.1.12 (A:) Putativ 72.9 0.83 6E-05 35.3 2.3 17 25-41 26-42 (200)
189 d1ihua1 c.37.1.10 (A:1-296) Ar 72.7 1.9 0.00014 35.3 4.8 35 27-69 9-43 (296)
190 d1sq5a_ c.37.1.6 (A:) Pantothe 72.4 1.8 0.00013 35.8 4.5 22 29-52 83-104 (308)
191 d2hyda1 c.37.1.12 (A:324-578) 72.1 0.8 5.8E-05 36.9 2.1 17 25-41 43-59 (255)
192 d1l2ta_ c.37.1.12 (A:) MJ0796 71.5 0.86 6.2E-05 36.0 2.1 25 25-51 30-54 (230)
193 d1jj7a_ c.37.1.12 (A:) Peptide 71.4 0.96 7E-05 36.3 2.5 18 25-42 39-56 (251)
194 d1q3ta_ c.37.1.1 (A:) CMP kina 70.5 1.4 0.0001 34.3 3.4 17 29-45 6-22 (223)
195 d1gm5a4 c.37.1.19 (A:550-755) 70.5 0.18 1.3E-05 39.4 -2.2 94 62-165 29-132 (206)
196 d1ihua2 c.37.1.10 (A:308-586) 70.3 2.3 0.00017 34.4 4.8 33 29-69 23-55 (279)
197 d1mv5a_ c.37.1.12 (A:) Multidr 70.3 0.78 5.7E-05 36.7 1.7 17 25-41 27-43 (242)
198 d2p6ra4 c.37.1.19 (A:203-403) 70.1 12 0.00089 28.3 8.8 76 62-143 40-144 (201)
199 d3b60a1 c.37.1.12 (A:329-581) 69.7 0.97 7.1E-05 36.4 2.1 18 25-42 40-57 (253)
200 d1g2912 c.37.1.12 (1:1-240) Ma 69.6 0.96 7E-05 36.0 2.0 18 25-42 28-45 (240)
201 d1odfa_ c.37.1.6 (A:) Hypothet 69.0 2.1 0.00015 34.9 4.1 14 30-43 31-44 (286)
202 d2awna2 c.37.1.12 (A:4-235) Ma 68.2 1.1 8.2E-05 35.3 2.2 25 25-51 25-49 (232)
203 d3dhwc1 c.37.1.12 (C:1-240) Me 68.1 1 7.4E-05 35.8 1.9 17 25-41 30-46 (240)
204 d1r0wa_ c.37.1.12 (A:) Cystic 67.2 1.4 0.0001 36.1 2.6 17 25-41 61-77 (281)
205 d1yt8a4 c.46.1.2 (A:243-372) T 66.9 3.3 0.00024 29.0 4.4 38 240-277 78-115 (130)
206 d2vp4a1 c.37.1.1 (A:12-208) De 66.7 1.2 9.1E-05 33.9 2.2 14 29-42 12-25 (197)
207 d1m7ga_ c.37.1.4 (A:) Adenosin 66.5 3.2 0.00023 32.0 4.6 16 28-43 26-41 (208)
208 d2qm8a1 c.37.1.10 (A:5-327) Me 66.4 2.5 0.00018 35.2 4.2 24 29-53 54-77 (323)
209 d3d31a2 c.37.1.12 (A:1-229) Su 66.2 1.6 0.00011 34.4 2.6 18 25-42 25-42 (229)
210 d1a7ja_ c.37.1.6 (A:) Phosphor 65.7 1.8 0.00013 35.4 2.9 15 29-43 7-21 (288)
211 d1wp9a2 c.37.1.19 (A:201-486) 65.7 24 0.0018 28.1 10.4 71 62-143 161-243 (286)
212 d2p67a1 c.37.1.10 (A:1-327) LA 65.6 3 0.00022 34.8 4.5 24 29-53 57-80 (327)
213 d1nija1 c.37.1.10 (A:2-223) Hy 65.5 2.3 0.00017 33.2 3.6 32 29-70 6-37 (222)
214 d1v43a3 c.37.1.12 (A:7-245) Hy 65.2 1.4 0.0001 34.9 2.2 25 25-51 31-55 (239)
215 d2jdid3 c.37.1.11 (D:82-357) C 64.0 5.3 0.00039 32.2 5.6 21 25-45 67-87 (276)
216 d1ji0a_ c.37.1.12 (A:) Branche 63.9 1.4 0.00011 35.0 2.0 18 25-42 31-48 (240)
217 d1nn5a_ c.37.1.1 (A:) Thymidyl 63.0 4.3 0.00031 31.2 4.8 25 28-53 5-29 (209)
218 d1t6na_ c.37.1.19 (A:) Spliceo 62.8 9.2 0.00067 29.1 6.7 74 241-317 68-152 (207)
219 d1gsia_ c.37.1.1 (A:) Thymidyl 62.7 4.2 0.00031 31.0 4.7 24 29-53 3-26 (208)
220 d1uf9a_ c.37.1.1 (A:) Dephosph 62.3 1.6 0.00012 33.1 2.0 14 30-43 7-20 (191)
221 d1qhla_ c.37.1.12 (A:) Cell di 62.2 0.9 6.5E-05 34.8 0.5 22 29-52 27-48 (222)
222 d1oxxk2 c.37.1.12 (K:1-242) Gl 61.8 1.6 0.00011 34.7 1.9 18 25-42 30-47 (242)
223 d1d0xa2 c.37.1.9 (A:2-33,A:80- 61.5 3.4 0.00025 38.6 4.5 38 15-53 111-151 (712)
224 d1lkxa_ c.37.1.9 (A:) Myosin S 61.3 3.3 0.00024 38.5 4.4 39 14-53 71-112 (684)
225 d1br2a2 c.37.1.9 (A:80-789) My 61.1 3.2 0.00023 38.8 4.3 40 12-52 74-116 (710)
226 d1g3qa_ c.37.1.10 (A:) Cell di 61.1 4.1 0.0003 31.7 4.4 31 30-68 7-37 (237)
227 d1wrba1 c.37.1.19 (A:164-401) 60.9 5.8 0.00042 31.2 5.3 73 241-317 97-179 (238)
228 d4tmka_ c.37.1.1 (A:) Thymidyl 59.9 4.1 0.0003 31.2 4.1 27 26-53 2-28 (210)
229 d1b0ua_ c.37.1.12 (A:) ATP-bin 59.8 2 0.00014 34.6 2.2 18 25-42 27-44 (258)
230 d1vhta_ c.37.1.1 (A:) Dephosph 59.6 2 0.00015 33.1 2.2 15 29-43 6-20 (208)
231 d2mysa2 c.37.1.9 (A:4-33,A:80- 59.5 3.5 0.00025 39.1 4.2 40 13-53 107-149 (794)
232 d1l7vc_ c.37.1.12 (C:) ABC tra 59.4 1.5 0.00011 34.7 1.3 18 25-42 24-41 (231)
233 d1w7ja2 c.37.1.9 (A:63-792) My 58.7 4 0.00029 38.3 4.5 41 12-53 77-120 (730)
234 d2jdia3 c.37.1.11 (A:95-379) C 58.7 8.7 0.00064 31.0 6.0 31 18-48 57-90 (285)
235 d2fh5b1 c.37.1.8 (B:63-269) Si 57.7 2.3 0.00017 32.6 2.2 15 27-41 1-15 (207)
236 d1jjva_ c.37.1.1 (A:) Dephosph 57.7 2.3 0.00016 32.7 2.2 14 30-43 6-19 (205)
237 d1z5za1 c.37.1.19 (A:663-906) 57.4 34 0.0024 26.4 9.6 92 35-143 66-162 (244)
238 g1xew.1 c.37.1.12 (X:,Y:) Smc 57.2 1.8 0.00013 36.1 1.6 15 28-42 28-42 (329)
239 d2onka1 c.37.1.12 (A:1-240) Mo 56.2 2.6 0.00019 33.3 2.2 23 27-51 25-47 (240)
240 d1u0la2 c.37.1.8 (A:69-293) Pr 55.8 3.7 0.00027 32.0 3.1 28 14-41 83-110 (225)
241 d1kk8a2 c.37.1.9 (A:1-28,A:77- 55.0 4.3 0.00031 38.5 4.0 40 13-53 105-147 (789)
242 d1tq1a_ c.46.1.3 (A:) Thiosulf 55.0 3.8 0.00028 28.1 2.8 38 240-277 70-108 (119)
243 d1qxna_ c.46.1.3 (A:) Polysulf 54.6 4.8 0.00035 28.4 3.4 37 240-276 80-117 (137)
244 d1veca_ c.37.1.19 (A:) DEAD bo 54.6 11 0.00081 28.6 5.9 73 240-316 69-152 (206)
245 d1wp9a1 c.37.1.19 (A:1-200) pu 54.3 8.1 0.00059 29.0 5.0 70 243-317 53-132 (200)
246 d1hyqa_ c.37.1.10 (A:) Cell di 54.1 7.1 0.00052 30.1 4.7 32 29-68 5-36 (232)
247 d1w1wa_ c.37.1.12 (A:) Smc hea 54.1 3.5 0.00025 35.5 3.1 15 28-42 27-41 (427)
248 d1susa1 c.66.1.1 (A:21-247) Ca 53.8 43 0.0031 25.6 10.5 125 12-175 43-169 (227)
249 d1oywa2 c.37.1.19 (A:1-206) Re 53.7 20 0.0014 26.8 7.3 58 243-300 66-123 (206)
250 d2b2na1 c.37.1.19 (A:26-333) T 53.3 20 0.0015 29.2 7.6 60 62-125 14-89 (308)
251 d1g6ha_ c.37.1.12 (A:) MJ1267 53.0 2.8 0.00021 33.5 2.0 18 25-42 29-46 (254)
252 d2afhe1 c.37.1.10 (E:1-289) Ni 52.8 6.9 0.0005 31.6 4.6 32 29-68 5-36 (289)
253 g1f2t.1 c.37.1.12 (A:,B:) Rad5 52.3 4.2 0.0003 32.8 3.1 15 28-42 25-39 (292)
254 d1vpla_ c.37.1.12 (A:) Putativ 52.0 3.2 0.00023 32.8 2.2 18 25-42 27-44 (238)
255 d1cp2a_ c.37.1.10 (A:) Nitroge 51.8 7 0.00051 31.1 4.5 32 29-68 4-35 (269)
256 d1qdea_ c.37.1.19 (A:) Initiat 51.5 12 0.00088 28.6 5.6 74 240-318 76-159 (212)
257 d1a1va2 c.37.1.14 (A:326-624) 51.4 10 0.00075 30.6 5.2 37 62-103 36-72 (299)
258 d1x1ra1 c.37.1.8 (A:10-178) Ra 49.5 5.5 0.0004 29.2 3.1 13 29-41 7-19 (169)
259 d1p5zb_ c.37.1.1 (B:) Deoxycyt 49.0 3.7 0.00027 32.1 2.2 16 27-42 3-18 (241)
260 d1z06a1 c.37.1.8 (A:32-196) Ra 48.8 5.7 0.00041 28.8 3.1 13 29-41 5-17 (165)
261 d2bmfa2 c.37.1.14 (A:178-482) 48.7 10 0.00074 30.6 5.1 55 62-121 178-232 (305)
262 d1kaoa_ c.37.1.8 (A:) Rap2a {H 48.5 5.8 0.00042 28.9 3.1 14 28-41 5-18 (167)
263 d1tuea_ c.37.1.20 (A:) Replica 47.5 6.6 0.00048 29.8 3.2 24 27-51 54-77 (205)
264 d1r8sa_ c.37.1.8 (A:) ADP-ribo 47.3 4.4 0.00032 29.0 2.2 13 29-41 3-15 (160)
265 d1urha2 c.46.1.2 (A:149-268) 3 47.1 12 0.0009 25.2 4.6 38 240-277 80-118 (120)
266 d1wmsa_ c.37.1.8 (A:) Rab9a {H 47.1 6.9 0.0005 28.7 3.4 13 29-41 9-21 (174)
267 g1ii8.1 c.37.1.12 (A:,B:) Rad5 46.7 5.6 0.0004 32.9 3.1 16 27-42 24-39 (369)
268 d1c9ka_ c.37.1.11 (A:) Adenosy 46.6 8.4 0.00061 28.7 3.7 48 29-88 2-49 (180)
269 d1z0fa1 c.37.1.8 (A:8-173) Rab 46.6 6.3 0.00046 28.6 3.1 13 29-41 7-19 (166)
270 d1gkub2 c.37.1.16 (B:251-498) 46.5 20 0.0015 27.9 6.4 73 62-143 25-98 (248)
271 d2g9na1 c.37.1.19 (A:21-238) I 46.0 6.5 0.00047 30.4 3.1 73 241-316 79-161 (218)
272 d1gmxa_ c.46.1.3 (A:) Sulfurtr 45.7 5.9 0.00043 26.5 2.5 38 240-277 56-94 (108)
273 d1ksha_ c.37.1.8 (A:) ADP-ribo 45.6 4.8 0.00035 29.2 2.2 14 28-41 4-17 (165)
274 d2ocpa1 c.37.1.1 (A:37-277) De 43.8 4.8 0.00035 31.5 2.0 15 28-42 4-18 (241)
275 d1r2qa_ c.37.1.8 (A:) Rab5a {H 43.5 7.5 0.00055 28.3 3.1 14 28-41 8-21 (170)
276 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 43.3 4.1 0.0003 30.1 1.5 14 28-41 15-28 (186)
277 d1luaa1 c.2.1.7 (A:98-288) Met 43.3 25 0.0018 26.0 6.2 79 24-121 21-100 (191)
278 d3raba_ c.37.1.8 (A:) Rab3a {R 43.1 5.5 0.0004 29.1 2.2 13 29-41 8-20 (169)
279 d1c1ya_ c.37.1.8 (A:) Rap1A {H 43.1 7.7 0.00056 28.1 3.1 14 28-41 5-18 (167)
280 d1h65a_ c.37.1.8 (A:) Chloropl 42.7 4.7 0.00034 32.1 1.8 14 28-41 34-47 (257)
281 d1mkya1 c.37.1.8 (A:2-172) Pro 42.5 5.8 0.00042 29.0 2.2 13 29-41 3-15 (171)
282 d1deka_ c.37.1.1 (A:) Deoxynuc 42.3 5.6 0.00041 31.1 2.2 15 29-43 4-18 (241)
283 d1m7ba_ c.37.1.8 (A:) RhoE (RN 42.0 7.4 0.00054 28.7 2.8 13 29-41 5-17 (179)
284 d2b2na1 c.37.1.19 (A:26-333) T 41.6 34 0.0025 27.7 7.2 85 243-327 15-117 (308)
285 d2f7sa1 c.37.1.8 (A:5-190) Rab 41.6 6.1 0.00044 29.4 2.3 13 29-41 8-20 (186)
286 d1ctqa_ c.37.1.8 (A:) cH-p21 R 40.9 8 0.00058 28.0 2.8 13 29-41 6-18 (166)
287 d1nrjb_ c.37.1.8 (B:) Signal r 40.9 6.1 0.00044 29.9 2.2 14 28-41 5-18 (209)
288 d1tmka_ c.37.1.1 (A:) Thymidyl 40.7 17 0.0012 27.7 4.9 18 26-43 3-20 (214)
289 d1z3ix1 c.37.1.19 (X:390-735) 40.6 90 0.0065 25.5 11.9 95 36-147 99-199 (346)
290 d1upta_ c.37.1.8 (A:) ADP-ribo 40.2 6.5 0.00047 28.3 2.2 14 28-41 7-20 (169)
291 d1e69a_ c.37.1.12 (A:) Smc hea 39.7 6.3 0.00046 32.1 2.3 15 28-42 26-40 (308)
292 d2qtvb1 c.37.1.8 (B:24-189) SA 39.5 6.8 0.00049 27.9 2.2 14 28-41 2-15 (166)
293 d1g16a_ c.37.1.8 (A:) Rab-rela 39.4 8.7 0.00064 27.8 2.8 13 29-41 5-17 (166)
294 d1xtqa1 c.37.1.8 (A:3-169) GTP 39.1 8.9 0.00065 27.8 2.8 14 28-41 6-19 (167)
295 d2cxxa1 c.37.1.8 (A:2-185) GTP 39.1 5.5 0.0004 29.4 1.6 14 28-41 2-15 (184)
296 d1z2aa1 c.37.1.8 (A:8-171) Rab 38.9 7.1 0.00051 28.3 2.2 13 29-41 5-17 (164)
297 d2a5ja1 c.37.1.8 (A:9-181) Rab 38.5 7.2 0.00052 28.5 2.2 13 29-41 6-18 (173)
298 d2atva1 c.37.1.8 (A:5-172) Ras 38.3 7.5 0.00054 28.3 2.2 13 29-41 5-17 (168)
299 d1fx0a3 c.37.1.11 (A:97-372) C 38.2 5.6 0.00041 32.1 1.6 20 25-44 66-85 (276)
300 d1i2ma_ c.37.1.8 (A:) Ran {Hum 38.0 6.9 0.00051 28.6 2.0 13 29-41 6-18 (170)
301 d1svia_ c.37.1.8 (A:) Probable 37.6 6.3 0.00046 29.6 1.8 14 28-41 25-38 (195)
302 d1moza_ c.37.1.8 (A:) ADP-ribo 37.3 5.9 0.00043 29.3 1.5 14 28-41 19-32 (182)
303 d2bmea1 c.37.1.8 (A:6-179) Rab 36.7 7.3 0.00053 28.5 2.0 13 29-41 8-20 (174)
304 d2atxa1 c.37.1.8 (A:9-193) Rho 36.7 10 0.00075 28.0 2.9 13 29-41 12-24 (185)
305 d2erxa1 c.37.1.8 (A:6-176) di- 36.7 8.1 0.00059 28.1 2.2 13 29-41 5-17 (171)
306 d1zd9a1 c.37.1.8 (A:18-181) AD 36.3 7.8 0.00057 28.0 2.1 14 28-41 4-17 (164)
307 d1wf3a1 c.37.1.8 (A:3-180) GTP 36.1 8.2 0.0006 28.3 2.2 14 28-41 7-20 (178)
308 d2f9la1 c.37.1.8 (A:8-182) Rab 36.0 8.3 0.00061 28.2 2.2 13 29-41 7-19 (175)
309 d1zj6a1 c.37.1.8 (A:2-178) ADP 35.7 7.7 0.00056 28.3 2.0 20 22-41 9-30 (177)
310 d2gj8a1 c.37.1.8 (A:216-376) P 35.5 7.9 0.00057 27.7 2.0 14 28-41 3-16 (161)
311 d1x3sa1 c.37.1.8 (A:2-178) Rab 35.3 12 0.00087 27.3 3.1 13 29-41 10-22 (177)
312 d1z08a1 c.37.1.8 (A:17-183) Ra 35.0 8.9 0.00065 27.8 2.2 14 29-42 6-19 (167)
313 d1ys7a2 c.23.1.1 (A:7-127) Tra 35.0 37 0.0027 22.7 5.5 27 245-271 4-30 (121)
314 d1yt8a1 c.46.1.2 (A:107-242) T 34.9 13 0.00098 25.9 3.1 36 241-276 79-116 (136)
315 d2gjsa1 c.37.1.8 (A:91-258) Ra 34.7 9.2 0.00067 27.8 2.2 13 29-41 4-16 (168)
316 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 34.6 11 0.00078 27.6 2.7 14 28-41 4-17 (177)
317 d1xhfa1 c.23.1.1 (A:2-122) Aer 34.6 35 0.0025 22.9 5.3 50 243-298 3-52 (121)
318 d2fn4a1 c.37.1.8 (A:24-196) r- 34.2 8.6 0.00063 28.1 2.0 14 28-41 8-21 (173)
319 d1udxa2 c.37.1.8 (A:157-336) O 33.8 7.4 0.00054 28.7 1.6 15 28-42 3-17 (180)
320 d1ky3a_ c.37.1.8 (A:) Rab-rela 33.7 9.6 0.0007 27.8 2.2 13 29-41 5-17 (175)
321 d2bmja1 c.37.1.8 (A:66-240) Ce 33.4 14 0.001 27.0 3.2 14 28-41 7-20 (175)
322 d2erya1 c.37.1.8 (A:10-180) r- 33.3 9.1 0.00066 27.8 2.0 14 28-41 7-20 (171)
323 d1azta2 c.37.1.8 (A:35-65,A:20 33.3 9.5 0.00069 29.3 2.2 15 28-42 8-22 (221)
324 d1yxma1 c.2.1.2 (A:7-303) Pero 33.2 1.1E+02 0.0079 24.2 10.0 86 23-121 9-102 (297)
325 d1e0sa_ c.37.1.8 (A:) ADP-ribo 33.1 13 0.00092 27.1 2.8 22 20-41 4-27 (173)
326 d1fzqa_ c.37.1.8 (A:) ADP-ribo 32.9 9.1 0.00066 27.9 2.0 14 28-41 18-31 (176)
327 d2c07a1 c.2.1.2 (A:54-304) bet 32.9 96 0.007 23.8 8.5 58 243-300 35-95 (251)
328 d1t9ha2 c.37.1.8 (A:68-298) Pr 32.8 5.4 0.00039 31.2 0.6 20 22-41 93-112 (231)
329 d1u8za_ c.37.1.8 (A:) Ras-rela 32.4 10 0.00075 27.5 2.2 14 28-41 6-19 (168)
330 d2g6ba1 c.37.1.8 (A:58-227) Ra 32.2 10 0.00076 27.4 2.2 13 29-41 9-21 (170)
331 d1yt8a2 c.46.1.2 (A:6-106) Thi 32.0 14 0.001 23.9 2.7 35 242-276 58-93 (101)
332 g1pyo.1 c.17.1.1 (A:,B:) Caspa 31.9 63 0.0046 25.0 7.2 49 241-290 25-87 (257)
333 d1e5da1 c.23.5.1 (A:251-402) R 31.7 61 0.0044 22.5 6.6 58 243-303 3-65 (152)
334 d2g3ya1 c.37.1.8 (A:73-244) GT 31.3 11 0.00082 27.4 2.2 13 29-41 6-18 (172)
335 d1z0ja1 c.37.1.8 (A:2-168) Rab 31.0 11 0.00084 27.1 2.2 14 28-41 6-19 (167)
336 d1lnza2 c.37.1.8 (A:158-342) O 30.8 12 0.00085 27.6 2.3 14 28-41 3-16 (185)
337 d1u0ja_ c.37.1.20 (A:) Rep 40 30.6 24 0.0018 27.9 4.3 36 13-50 87-127 (267)
338 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 30.6 12 0.00085 27.6 2.2 13 29-41 5-17 (184)
339 d1mkya2 c.37.1.8 (A:173-358) P 30.5 11 0.00083 27.6 2.2 14 28-41 10-23 (186)
340 d1yzqa1 c.37.1.8 (A:14-177) Ra 30.5 11 0.00078 27.1 2.0 13 29-41 3-15 (164)
341 d2fu5c1 c.37.1.8 (C:3-175) Rab 30.2 9.4 0.00068 27.9 1.6 13 29-41 9-21 (173)
342 d1osna_ c.37.1.1 (A:) Thymidin 30.2 11 0.00083 31.1 2.2 14 29-42 8-21 (331)
343 d1mh1a_ c.37.1.8 (A:) Rac {Hum 30.0 15 0.0011 26.9 2.9 13 29-41 8-20 (183)
344 g1qtn.1 c.17.1.1 (A:,B:) Caspa 29.7 63 0.0046 24.7 6.8 49 241-290 10-79 (242)
345 d2ew1a1 c.37.1.8 (A:4-174) Rab 29.6 11 0.00082 27.3 2.0 13 29-41 8-20 (171)
346 d2a5yb3 c.37.1.20 (B:109-385) 29.5 15 0.0011 29.4 2.9 15 29-43 47-61 (277)
347 d1p6xa_ c.37.1.1 (A:) Thymidin 29.5 17 0.0012 30.0 3.2 15 28-42 8-22 (333)
348 d2gc6a1 c.59.1.2 (A:297-425) F 29.4 16 0.0012 24.9 2.7 42 140-184 13-54 (129)
349 d1vl1a_ c.124.1.1 (A:) 6-phosp 29.2 49 0.0036 25.0 5.9 56 73-147 14-69 (218)
350 d1zcba2 c.37.1.8 (A:47-75,A:20 29.0 12 0.0009 27.7 2.2 13 29-41 5-17 (200)
351 d1s2ma1 c.37.1.19 (A:46-251) P 29.0 50 0.0036 24.5 5.9 74 240-317 67-150 (206)
352 d1puia_ c.37.1.8 (A:) Probable 28.9 12 0.00086 27.4 2.0 14 28-41 18-31 (188)
353 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 28.9 13 0.00094 26.9 2.2 13 29-41 6-18 (170)
354 d2ngra_ c.37.1.8 (A:) CDC42 {H 28.4 16 0.0011 27.1 2.7 13 29-41 6-18 (191)
355 d1e0ca2 c.46.1.2 (A:136-271) S 28.3 18 0.0013 25.1 2.9 37 240-276 86-123 (136)
356 d2bcgy1 c.37.1.8 (Y:3-196) GTP 28.2 12 0.00089 27.9 2.0 13 29-41 9-21 (194)
357 d2a9pa1 c.23.1.1 (A:2-118) DNA 27.7 44 0.0032 22.1 4.8 48 244-297 2-49 (117)
358 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 27.6 12 0.00091 27.6 2.0 15 28-42 4-18 (200)
359 d2bv3a2 c.37.1.8 (A:7-282) Elo 27.5 16 0.0012 29.2 2.7 17 27-43 7-23 (276)
360 d1peya_ c.23.1.1 (A:) Sporulat 27.3 48 0.0035 22.0 5.0 30 243-272 2-31 (119)
361 d1egaa1 c.37.1.8 (A:4-182) GTP 26.9 14 0.001 26.8 2.1 13 29-41 8-20 (179)
362 d1wb9a2 c.37.1.12 (A:567-800) 26.5 30 0.0022 26.7 4.1 17 27-44 42-58 (234)
363 d1ozbi_ g.74.1.1 (I:) Preprote 25.6 7.1 0.00052 18.2 0.1 8 33-40 7-14 (26)
364 d1fmca_ c.2.1.2 (A:) 7-alpha-h 24.9 1E+02 0.0076 23.6 7.4 58 243-300 36-96 (255)
365 d2rhca1 c.2.1.2 (A:5-261) beta 24.6 1.4E+02 0.01 22.7 8.5 57 244-300 28-87 (257)
366 d1svsa1 c.37.1.8 (A:32-60,A:18 24.0 17 0.0013 26.6 2.2 14 28-41 4-17 (195)
367 d1mvoa_ c.23.1.1 (A:) PhoP rec 23.8 60 0.0044 21.5 5.0 30 244-273 4-33 (121)
368 d1r0ka2 c.2.1.3 (A:3-126,A:265 23.7 1.1E+02 0.0082 21.3 9.4 14 27-40 3-17 (150)
369 g1nme.1 c.17.1.1 (A:,B:) Apopa 23.2 83 0.006 23.9 6.3 47 243-290 17-77 (238)
370 d1x1ta1 c.2.1.2 (A:1-260) D(-) 23.1 1.5E+02 0.011 22.6 9.3 83 23-122 1-92 (260)
371 d1zesa1 c.23.1.1 (A:3-123) Pho 23.0 74 0.0054 21.0 5.3 48 244-297 2-49 (121)
372 d1krwa_ c.23.1.1 (A:) NTRC rec 22.8 99 0.0072 20.4 6.7 51 243-299 4-54 (123)
373 d1ye8a1 c.37.1.11 (A:1-178) Hy 22.6 51 0.0037 23.3 4.7 23 28-51 2-24 (178)
374 d1t1va_ c.47.1.14 (A:) SH3BGRL 22.5 87 0.0063 19.6 6.0 43 245-287 4-53 (93)
375 d1yb1a_ c.2.1.2 (A:) 17-beta-h 22.0 1.3E+02 0.0092 22.9 7.2 58 243-300 32-92 (244)
376 d1wmaa1 c.2.1.2 (A:2-276) Carb 21.9 95 0.0069 24.1 6.6 58 243-300 29-89 (275)
377 d2c07a1 c.2.1.2 (A:54-304) bet 21.5 1.6E+02 0.012 22.3 8.0 80 24-121 8-95 (251)
378 d1nyta1 c.2.1.7 (A:102-271) Sh 21.4 51 0.0037 23.6 4.4 48 24-84 16-63 (170)
379 d1u11a_ c.23.8.1 (A:) N5-CAIR 21.2 1.3E+02 0.0096 21.2 7.8 57 244-300 4-65 (159)
380 d1ycga1 c.23.5.1 (A:251-399) N 20.5 95 0.0069 21.2 5.7 57 244-303 4-65 (149)
381 d2b8ea1 c.108.1.7 (A:416-434,A 20.4 1.2E+02 0.009 20.5 6.7 44 245-293 40-84 (135)
382 d1gega_ c.2.1.2 (A:) meso-2,3- 20.2 1.7E+02 0.013 22.2 8.0 57 244-300 27-86 (255)
383 d1yt8a3 c.46.1.2 (A:373-529) T 20.2 22 0.0016 25.4 1.9 37 240-276 56-93 (157)
384 d1e2ka_ c.37.1.1 (A:) Thymidin 20.2 20 0.0015 29.4 1.9 14 29-42 7-20 (329)
No 1
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.4e-36 Score=254.38 Aligned_cols=190 Identities=34% Similarity=0.625 Sum_probs=177.0
Q ss_pred cccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 2 KDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 2 ~~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
++|..+||.+|+|+|+++++.+++|+|+++.+|||||||++|++|++..+... .++.++++++|+++|+.|.++.
T Consensus 16 ~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllP~l~~~~~~-----~~~~~~lil~pt~el~~q~~~~ 90 (206)
T d1veca_ 16 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLK-----KDNIQAMVIVPTRELALQVSQI 90 (206)
T ss_dssp HHHHTTTCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHHHHHHHHHHHCCTT-----SCSCCEEEECSCHHHHHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHcCCCEEeeccCccccccccccchhhccccc-----ccCcceEEEeecchhhHHHHHH
Confidence 57889999999999999999999999999999999999999999999987653 3478899999999999999999
Q ss_pred HHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHH
Q 013962 82 VKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 161 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~ 161 (433)
+..+.....+..+....|+.........+..+++|+|+||+++.+++......+.++.++|+||||.+++.+|...+..+
T Consensus 91 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ivv~TPgrl~~~~~~~~~~~~~l~~lVlDEaD~ll~~~f~~~i~~I 170 (206)
T d1veca_ 91 CIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDI 170 (206)
T ss_dssp HHHHTTTSSSCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEETHHHHTSTTTHHHHHHH
T ss_pred HHHHhhcccCcccccccCCccHHHHHHHHHhccCeEEeCCccccccccchhccccccceEEEeccccccccchHHHHHHH
Confidence 99998777778888899999888888888889999999999999999998889999999999999999999999999999
Q ss_pred HhhCCCCCcEEEEEeecchHHHHHHHHhcCCCeEE
Q 013962 162 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQV 196 (433)
Q Consensus 162 ~~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~ 196 (433)
+..+++..|++++|||++..+..+++.++.+|..+
T Consensus 171 ~~~~~~~~Q~~l~SAT~~~~v~~l~~~~l~~P~~I 205 (206)
T d1veca_ 171 ILTLPKNRQILLYSATFPLSVQKFMNSHLEKPYEI 205 (206)
T ss_dssp HHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEE
T ss_pred HHhCCCCCEEEEEEecCCHHHHHHHHHHCCCCEEE
Confidence 99999999999999999999999999999998764
No 2
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=4.1e-37 Score=259.24 Aligned_cols=191 Identities=37% Similarity=0.625 Sum_probs=176.9
Q ss_pred cccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 2 KDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 2 ~~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
++|..+||.+|+|+|.++++.+++|+|+++.+|||||||++|++|+++.+.... ...++++++||++|+.|.++.
T Consensus 30 ~~L~~~g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTlayllPil~~l~~~~-----~~~~~lil~PtreLa~Qi~~~ 104 (222)
T d2j0sa1 30 RGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV-----RETQALILAPTRELAVQIQKG 104 (222)
T ss_dssp HHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHTCCTTS-----CSCCEEEECSSHHHHHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhhhhcccccccccccc-----cCceeEEecchHHHHHHHHHH
Confidence 568889999999999999999999999999999999999999999999876543 377899999999999999999
Q ss_pred HHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHH
Q 013962 82 VKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 161 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~ 161 (433)
+.++.... ++++..+.|+.........+..+++|+|+||+++.+++......+.++.++|+||||.+++.++...+..+
T Consensus 105 ~~~l~~~~-~i~~~~~~g~~~~~~~~~~l~~~~~Ilv~TPgrl~~~~~~~~~~~~~l~~lVlDEaD~ll~~~f~~~i~~I 183 (222)
T d2j0sa1 105 LLALGDYM-NVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDV 183 (222)
T ss_dssp HHHHTTTT-TCCEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHHHHTSTTTHHHHHHH
T ss_pred HHHHhCcc-ceeEEEEeecccchhhHHHhccCCeEEeCCCCcHHhcccccccccccceeeeecchhHhhhcCcHHHHHHH
Confidence 99998764 78999999999988888888888999999999999999998889999999999999999999999999999
Q ss_pred HhhCCCCCcEEEEEeecchHHHHHHHHhcCCCeEEEe
Q 013962 162 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 198 (433)
Q Consensus 162 ~~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~~~ 198 (433)
+..++...|++++|||++..+..++..++.+|..+.+
T Consensus 184 ~~~l~~~~Q~ilfSAT~~~~v~~l~~~~l~~Pv~I~V 220 (222)
T d2j0sa1 184 YRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILV 220 (222)
T ss_dssp HTTSCTTCEEEEEESCCCHHHHTTGGGTCSSCEEECC
T ss_pred HHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEEEE
Confidence 9999999999999999999999999999999987654
No 3
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=100.00 E-value=1.1e-36 Score=274.14 Aligned_cols=272 Identities=19% Similarity=0.262 Sum_probs=185.4
Q ss_pred hhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCC
Q 013962 23 ALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 102 (433)
Q Consensus 23 ~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (433)
+.+++++++.||||||||++|+.+++...... +.++||++|+++|+.|+++++..+.........
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~~-------~~~~lvi~Ptr~La~q~~~~l~~~~~~~~~~~~-------- 70 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVREAIKR-------GLRTLILAPTRVVAAEMEEALRGLPIRYQTPAI-------- 70 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHHHHHHH-------TCCEEEEESSHHHHHHHHHHTTTSCCBCCC-----------
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHHHHHhc-------CCEEEEEccHHHHHHHHHHHHhcCCcceeeeEE--------
Confidence 45788999999999999998888888776654 778999999999999999888765322111110
Q ss_pred HHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHHhhC--CCCCcEEEEEeecch
Q 013962 103 IAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL--PDKHQTLLFSATMPV 180 (433)
Q Consensus 103 ~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~--~~~~~~i~~SAT~~~ 180 (433)
.........++++|++.|...... ...+.+++++|+||+|++..+++ ....++..+ ....+++++|||++.
T Consensus 71 ----~~~~~~~~~i~~~t~~~l~~~~~~-~~~~~~~~~vViDE~H~~~~~~~--~~~~~l~~~~~~~~~~~v~~SAT~~~ 143 (305)
T d2bmfa2 71 ----RAEHTGREIVDLMCHATFTMRLLS-PIRVPNYNLIIMDEAHFTDPASI--AARGYISTRVEMGEAAGIFMTATPPG 143 (305)
T ss_dssp ---------CCCSEEEEEHHHHHHHHTS-SSCCCCCSEEEEESTTCCSHHHH--HHHHHHHHHHHHTSCEEEEECSSCTT
T ss_pred ----eecccCccccccCCcHHHHHHHhc-CccccceeEEEeeeeeecchhhH--HHHHHHHHhhccccceEEEeecCCCc
Confidence 012235578999999988766553 45567899999999998865431 122222221 346789999999974
Q ss_pred HHHHHHHHhcCCCeEEEecCcCCCCCCceEEEEEcCchhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHH
Q 013962 181 EIEALAQEYLTDPVQVKVGKVSSPTANVIQILEKVSENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSE 260 (433)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~ 260 (433)
.... +..... .+................ ..+ ....++++|||++++.++.+++
T Consensus 144 ~~~~----~~~~~~------------~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~lvf~~~~~~~~~l~~ 196 (305)
T d2bmfa2 144 SRDP----FPQSNA------------PIMDEEREIPERSWNSGH-EWV----------TDFKGKTVWFVPSIKAGNDIAA 196 (305)
T ss_dssp CCCS----SCCCSS------------CEEEEECCCCCSCCSSCC-HHH----------HSSCSCEEEECSCHHHHHHHHH
T ss_pred ceee----ecccCC------------cceEEEEeccHHHHHHHH-HHH----------HhhCCCEEEEeccHHHHHHHHH
Confidence 3211 000000 001111111111100000 000 0234569999999999999999
Q ss_pred HHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecccccCcccCCCcEEEE----------cc----------CC
Q 013962 261 ALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVN----------LD----------LP 320 (433)
Q Consensus 261 ~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~----------~~----------~~ 320 (433)
.|++.+..+..+|+++....+ ..|++|..+++|+|+++++|+|++ ++.||. ++ .|
T Consensus 197 ~L~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~lvaT~~~~~G~~~~-~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (305)
T d2bmfa2 197 CLRKNGKKVIQLSRKTFDSEY----IKTRTNDWDFVVTTDISEMGANFK-AERVIDPRRCMKPVILTDGEERVILAGPMP 271 (305)
T ss_dssp HHHHHTCCCEECCTTCHHHHG----GGGGTSCCSEEEECGGGGTTCCCC-CSEEEECCEEEEEEEECSSSCEEEEEEEEE
T ss_pred HHHhCCCCEEEeCCcChHHHH----hhhhccchhhhhhhHHHHhcCCCC-ccEEEEcCCceeeeEecCCCCceEEecccc
Confidence 999999999999998865443 467899999999999999999995 555553 22 24
Q ss_pred CChhHHHhhcccCCCCCCceeEEEEecc
Q 013962 321 KTVEDYVHRIGRTGRGGSMGQATSFYTD 348 (433)
Q Consensus 321 ~s~~~~~Q~~GR~~R~g~~g~~~~~~~~ 348 (433)
.|..+|+||+||+||.|+.+...+++..
T Consensus 272 ~s~~~~~Qr~GR~GR~~~~~~~~~~~~~ 299 (305)
T d2bmfa2 272 VTHSSAAQRRGRVGRNPKNENDQYIYMG 299 (305)
T ss_dssp CCHHHHHHHHTTSSCSSSCCCEEEEECS
T ss_pred CCHHHHhhhhcCcCcCCCCceEEEEECC
Confidence 5788999999999999988877777653
No 4
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=9.1e-36 Score=249.64 Aligned_cols=191 Identities=32% Similarity=0.541 Sum_probs=172.3
Q ss_pred cccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 2 KDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 2 ~~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
++|..+||.+|+|+|.++++.+++|+|+++.+|||||||++|++|+++.+... ..+.++++++|+++|+.|+.+.
T Consensus 14 ~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla~~lp~l~~~~~~-----~~~~~~lil~PtreL~~qi~~~ 88 (207)
T d1t6na_ 14 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----TGQVSVLVMCHTRELAFQISKE 88 (207)
T ss_dssp HHHHHTTCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHCCCC-----TTCCCEEEECSCHHHHHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHcCCCeEEEeccccccccccccceeeeeccc-----CCCceEEEEeccchhhHHHHHH
Confidence 57789999999999999999999999999999999999999999999886543 3477899999999999999999
Q ss_pred HHHHhccCCCceEEEEECCCCHHHHHHHh-hCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccC-CCHHHHH
Q 013962 82 VKALSRSLDSFKTAIVVGGTNIAEQRSEL-RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDM-GFEPQIR 159 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~-~~~~~~~ 159 (433)
+..+...........+.|+.........+ ...++|+|+||+++.+++......++++.++|+||||.+.+. ++...+.
T Consensus 89 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ilI~TP~rl~~~~~~~~~~l~~l~~lVlDEaD~ll~~~~~~~~i~ 168 (207)
T d1t6na_ 89 YERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQ 168 (207)
T ss_dssp HHHHTTTSTTCCEEEESCCSCHHHHHHHHHHSCCSEEEECHHHHHHHHHTTSSCCTTCCEEEEESHHHHHSSHHHHHHHH
T ss_pred HHHHHhhCCCceeEEEeccccHHHHHHHHHhcCCCEEEeCcchhhhhccCCceeccccceeehhhhhhhhhcCCcHHHHH
Confidence 99998877778888889998877666555 467899999999999999988888999999999999999974 6888899
Q ss_pred HHHhhCCCCCcEEEEEeecchHHHHHHHHhcCCCeEEE
Q 013962 160 EVMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVK 197 (433)
Q Consensus 160 ~~~~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~~ 197 (433)
.++..+++..|++++|||++..+...++.++.+|..+.
T Consensus 169 ~I~~~~~~~~Q~il~SAT~~~~v~~l~~~~l~~P~~I~ 206 (207)
T d1t6na_ 169 EIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIF 206 (207)
T ss_dssp HHHHTSCSSSEEEEEESCCCTTTHHHHHTTCSSCEEEE
T ss_pred HHHHhCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEEe
Confidence 99999999999999999999999999999999987764
No 5
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.3e-35 Score=248.51 Aligned_cols=192 Identities=36% Similarity=0.574 Sum_probs=167.7
Q ss_pred cccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 2 KDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 2 ~~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
++|..+||.+|+|+|..+++.++.|+++++++|||||||++|++|+++.+... ..+.++++++|+++|+.|.++.
T Consensus 25 ~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllp~l~~i~~~-----~~~~~alil~Pt~eL~~Q~~~~ 99 (218)
T d2g9na1 25 RGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELD-----LKATQALVLAPTRELAQQIQKV 99 (218)
T ss_dssp HHHHHHTCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHHHHHHHHHCCTT-----CCSCCEEEECSSHHHHHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhhhhhhhheeccc-----ccCccEEEEcccchhhhhHHHH
Confidence 46788999999999999999999999999999999999999999999998553 3488899999999999999999
Q ss_pred HHHHhccCCCceEEEEECCCCHHHHH-HHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHH
Q 013962 82 VKALSRSLDSFKTAIVVGGTNIAEQR-SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIRE 160 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~ 160 (433)
+..+.... +.....+.++....... ......++|+|+||+++.+++.+....++++.++|+||||.+.+.++...+..
T Consensus 100 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~l~~lVlDEaD~ll~~~f~~~~~~ 178 (218)
T d2g9na1 100 VMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYD 178 (218)
T ss_dssp HHHHHTTT-TCCEEEECC--CCCSTTTSSSSCCCSEEEECHHHHHHHHHTTSSCSTTCCEEEEESHHHHHHTTCHHHHHH
T ss_pred Hhhhcccc-ceeEEeeecccchhHHHHHHhcCCCEEEEeCChhHHHHHhcCCcccccceEEEeeecchhhcCchHHHHHH
Confidence 99998875 56666666554433222 22335689999999999999999888999999999999999999999999999
Q ss_pred HHhhCCCCCcEEEEEeecchHHHHHHHHhcCCCeEEEec
Q 013962 161 VMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKVG 199 (433)
Q Consensus 161 ~~~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~~~~ 199 (433)
++..++...|++++|||++..+....+.++.+|..+.+.
T Consensus 179 Il~~~~~~~Q~il~SAT~~~~v~~~~~~~l~~pv~i~v~ 217 (218)
T d2g9na1 179 IFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVK 217 (218)
T ss_dssp HHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEEECC
T ss_pred HHHhCCCCCeEEEEEecCCHHHHHHHHHHCCCCEEEEEe
Confidence 999999999999999999999999999999999887653
No 6
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=1.7e-34 Score=242.55 Aligned_cols=189 Identities=41% Similarity=0.668 Sum_probs=170.0
Q ss_pred cccccCCCCCCcHHHHHHHHHhhcCC-cEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHH
Q 013962 2 KDIEFHEYTRPTSIQAQAMPVALSGR-DLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEK 80 (433)
Q Consensus 2 ~~~~~~~~~~~~~~Q~~~i~~~~~~~-~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~ 80 (433)
++|..+||.+|+|+|.++++.+++++ ++++.+|||+|||++|++|++...... .+++++|++|+++|+.|+.+
T Consensus 17 ~~l~~~g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~~~~~~~------~~~~~lil~pt~~l~~q~~~ 90 (208)
T d1hv8a1 17 NAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNEN------NGIEAIILTPTRELAIQVAD 90 (208)
T ss_dssp HHHHHHTCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHHHSCSS------SSCCEEEECSCHHHHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeecccccccccc------cCcceEEEeeccccchhhhh
Confidence 46778999999999999999999875 899999999999999999998875443 48899999999999999999
Q ss_pred HHHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHH
Q 013962 81 EVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIRE 160 (433)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~ 160 (433)
.+..+.... +..+....|+.....+...+ .+++|+|+||++|.+++.++...+++++++|+||||.+.+.++...+..
T Consensus 91 ~~~~~~~~~-~~~v~~~~g~~~~~~~~~~l-~~~~IlV~TP~~l~~~l~~~~~~~~~l~~lViDEad~l~~~~~~~~i~~ 168 (208)
T d1hv8a1 91 EIESLKGNK-NLKIAKIYGGKAIYPQIKAL-KNANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLNMGFIKDVEK 168 (208)
T ss_dssp HHHHHHCSS-CCCEEEECTTSCHHHHHHHH-HTCSEEEECHHHHHHHHHTTCSCTTSCCEEEEETHHHHHTTTTHHHHHH
T ss_pred hhhhhcccC-CeEEEEeeCCCChHHHHHhc-CCCCEEEEChHHHHHHHHcCCCCcccCcEEEEEChHHhhcCCChHHHHH
Confidence 999998764 68888899998877766655 4689999999999999998888899999999999999999999999999
Q ss_pred HHhhCCCCCcEEEEEeecchHHHHHHHHhcCCCeEEEe
Q 013962 161 VMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 198 (433)
Q Consensus 161 ~~~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~~~ 198 (433)
++..+++++|++++|||++..+...++.++.+|..+..
T Consensus 169 I~~~~~~~~Q~i~~SAT~~~~v~~~~~~~l~~~~~I~~ 206 (208)
T d1hv8a1 169 ILNACNKDKRILLFSATMPREILNLAKKYMGDYSFIKA 206 (208)
T ss_dssp HHHTSCSSCEEEEECSSCCHHHHHHHHHHCCSEEEEEC
T ss_pred HHHhCCCCCeEEEEEccCCHHHHHHHHHHCCCCeEEEE
Confidence 99999999999999999999999999999998877654
No 7
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=100.00 E-value=1.1e-33 Score=241.75 Aligned_cols=197 Identities=45% Similarity=0.733 Sum_probs=175.5
Q ss_pred CcccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCC----CCCCCCceEEEEcCcHHHHH
Q 013962 1 MKDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTP----VGRGDGPLALVLAPTRELAQ 76 (433)
Q Consensus 1 ~~~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~----~~~~~~~~~lvl~P~~~L~~ 76 (433)
+++|..+||.+|+|+|.++++.+++|+|+++++|||||||++|++|+++.+..... .....++++++++|+++|+.
T Consensus 33 ~~~L~~~g~~~pt~iQ~~~ip~il~g~dvvi~a~TGsGKTlayllp~l~~l~~~~~~~~~~~~~~~~~alil~pt~el~~ 112 (238)
T d1wrba1 33 RNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYPKCLILAPTRELAI 112 (238)
T ss_dssp TTTTTTTTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHHHTTCC------CCBCCSEEEECSSHHHHH
T ss_pred HHHHHHCCCCCCCHHHHHHhhhhhCCCCEEEECCCCCCcceeeHHHHHHHHHhcccccccccCCCCceEEEeccchhhhc
Confidence 46788999999999999999999999999999999999999999999999876422 12345788999999999999
Q ss_pred HHHHHHHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHH
Q 013962 77 QIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEP 156 (433)
Q Consensus 77 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~ 156 (433)
|+.+.+..+.... ++++..+.|+............+++|+|+||++|.+++..+...+.++.++|+||||.+++.+|..
T Consensus 113 q~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ivV~TP~~l~~~~~~~~~~l~~v~~lViDEaD~ll~~~f~~ 191 (238)
T d1wrba1 113 QILSESQKFSLNT-PLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEP 191 (238)
T ss_dssp HHHHHHHHHHTTS-SCCEEEECSSSCSHHHHHHHSSCCSEEEECHHHHHHHHHTTSBCCTTCCEEEEETHHHHHHTTCHH
T ss_pred chheeeeecccCC-CcEEEEEeccchhhHHHhhcccCCceeecCHHHHHhHHccCceeccccceeeeehhhhhhhhccHH
Confidence 9999999988765 688999999988887777788889999999999999999888889999999999999999999999
Q ss_pred HHHHHHhhCC----CCCcEEEEEeecchHHHHHHHHhcCCCeEEEe
Q 013962 157 QIREVMQNLP----DKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 198 (433)
Q Consensus 157 ~~~~~~~~~~----~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~~~ 198 (433)
.+..+++.+. ..+|++++|||++..+..+++.++.+|..+.+
T Consensus 192 ~i~~Il~~~~~~~~~~~Q~il~SAT~~~~v~~l~~~~~~~p~~i~v 237 (238)
T d1wrba1 192 QIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTV 237 (238)
T ss_dssp HHHHHHHSSCCCCGGGCEEEEEESSCCHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHhcCCCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEEEe
Confidence 9999988664 25699999999999999999999999987765
No 8
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2.4e-34 Score=241.48 Aligned_cols=189 Identities=37% Similarity=0.603 Sum_probs=163.0
Q ss_pred cccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 2 KDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 2 ~~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
++|..+||.+|+|+|.++++.++.|+|+++.+|||||||++|++|++..+... ..++++++++|+++|+.|....
T Consensus 23 ~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~~lp~i~~l~~~-----~~~~~~lil~pt~el~~q~~~~ 97 (212)
T d1qdea_ 23 RGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTS-----VKAPQALMLAPTRELALQIQKV 97 (212)
T ss_dssp HHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHCCTT-----CCSCCEEEECSSHHHHHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhhHhhhHhhhhcc-----CCCcceEEEcccHHHhhhhhhh
Confidence 56788999999999999999999999999999999999999999999987543 3488999999999999999999
Q ss_pred HHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHH
Q 013962 82 VKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 161 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~ 161 (433)
+..+.... ........++.......... .+++|+|+||+++.+++......+.+++++|+||||.+.+.++...+..+
T Consensus 98 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~IvI~TP~~l~~~~~~~~~~l~~l~~lVlDEad~lld~~f~~~v~~I 175 (212)
T d1qdea_ 98 VMALAFHM-DIKVHACIGGTSFVEDAEGL-RDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQI 175 (212)
T ss_dssp HHHHTTTS-CCCEEEECC----------C-TTCSEEEECHHHHHHHHHTTSSCCTTCCEEEEETHHHHHHTTCHHHHHHH
T ss_pred hccccccc-ccceeeEeeccchhHHHHHh-cCCcEEEECCCccccccccCceecCcceEEeehhhhhhcccchHHHHHHH
Confidence 98877654 56666666666555444433 46899999999999999999899999999999999999999999999999
Q ss_pred HhhCCCCCcEEEEEeecchHHHHHHHHhcCCCeEEE
Q 013962 162 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVK 197 (433)
Q Consensus 162 ~~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~~ 197 (433)
+..+++.+|++++|||+++.+...++.++.+|..+.
T Consensus 176 ~~~~~~~~Q~vl~SAT~~~~v~~l~~~~l~~Pv~i~ 211 (212)
T d1qdea_ 176 FTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRIL 211 (212)
T ss_dssp HHHSCTTCEEEEEESSCCHHHHHHHHHHCSSCEEEC
T ss_pred HHhCCCCCeEEEEEeeCCHHHHHHHHHHCCCCEEEe
Confidence 999999999999999999999999999999997653
No 9
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.9e-33 Score=236.08 Aligned_cols=191 Identities=38% Similarity=0.626 Sum_probs=176.4
Q ss_pred cccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 2 KDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 2 ~~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
++|..+||.+|+|+|.++++.+++|+|+++.+|||+|||++|++|++..+.... .+.+.++++|+..++.|....
T Consensus 14 ~~L~~~g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTlay~lp~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 88 (206)
T d1s2ma1 14 MGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKL-----NKIQALIMVPTRELALQTSQV 88 (206)
T ss_dssp HHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTS-----CSCCEEEECSSHHHHHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhhhhcccccccccccc-----ccccceeeccchhhhhhhhhh
Confidence 578899999999999999999999999999999999999999999999876543 477899999999999999988
Q ss_pred HHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHH
Q 013962 82 VKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 161 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~ 161 (433)
+..+... .++++....|+.........+..+++|+|+||++|.+++......+.++.++|+||||.+.+.+|...+..+
T Consensus 89 ~~~~~~~-~~~~~~~~~g~~~~~~~~~~l~~~~~Ili~TP~~l~~~l~~~~~~l~~l~~lV~DEaD~l~~~~f~~~v~~I 167 (206)
T d1s2ma1 89 VRTLGKH-CGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQI 167 (206)
T ss_dssp HHHHTTT-TTCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTTCSCCTTCCEEEEESHHHHSSHHHHHHHHHH
T ss_pred hhhcccc-cCeeEEeecCccchhhHHHHhcccceEEEECCcccccccccceeecccceEEEeechhhhhhhhhHHHHHHH
Confidence 8887765 479999999999998888888889999999999999999998889999999999999999999999999999
Q ss_pred HhhCCCCCcEEEEEeecchHHHHHHHHhcCCCeEEEe
Q 013962 162 MQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 198 (433)
Q Consensus 162 ~~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~~~ 198 (433)
+..+++.+|++++|||++..+..++..++.+|..+.+
T Consensus 168 ~~~l~~~~Q~il~SATl~~~v~~~~~~~l~~P~~I~~ 204 (206)
T d1s2ma1 168 LSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINL 204 (206)
T ss_dssp HTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEESC
T ss_pred HHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEEEe
Confidence 9999999999999999999999999999999977654
No 10
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.98 E-value=6.7e-32 Score=227.95 Aligned_cols=192 Identities=32% Similarity=0.567 Sum_probs=166.8
Q ss_pred cccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 2 KDIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 2 ~~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
++|..+||.+|+|+|.+|++.+++|+|+++.+|||||||++|++|++....... .....++++|+..++.+.+..
T Consensus 14 ~~l~~~g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTlayllp~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 88 (209)
T d1q0ua_ 14 EAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEKIKPER-----AEVQAVITAPTRELATQIYHE 88 (209)
T ss_dssp HHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHHHHHHHHHHCCTTS-----CSCCEEEECSSHHHHHHHHHH
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHCCCCeEeecccccccceeeeeeecccccccc-----ccccccccccccchhHHHHHH
Confidence 567889999999999999999999999999999999999999999998876542 367789999999999999988
Q ss_pred HHHHhccC---CCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHH
Q 013962 82 VKALSRSL---DSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQI 158 (433)
Q Consensus 82 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~ 158 (433)
+....... ....+....++.+..........+++|+|+||+++..++.+....+.++.++|+||||.+.++++...+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ilv~TP~~l~~~~~~~~~~~~~l~~lViDEad~ll~~~f~~~v 168 (209)
T d1q0ua_ 89 TLKITKFCPKDRMIVARCLIGGTDKQKALEKLNVQPHIVIGTPGRINDFIREQALDVHTAHILVVDEADLMLDMGFITDV 168 (209)
T ss_dssp HHHHHTTSCGGGCCCEEEECCCSHHHHTTCCCSSCCSEEEECHHHHHHHHHTTCCCGGGCCEEEECSHHHHHHTTCHHHH
T ss_pred HHhhhccccccccccccccccchhhHHHHHHhccCceEEEecCchhhhhhhhhccccccceEEEEeecccccccccHHHH
Confidence 88766543 235555666666555444445577999999999999999988888899999999999999999999999
Q ss_pred HHHHhhCCCCCcEEEEEeecchHHHHHHHHhcCCCeEEEe
Q 013962 159 REVMQNLPDKHQTLLFSATMPVEIEALAQEYLTDPVQVKV 198 (433)
Q Consensus 159 ~~~~~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~~~~~~ 198 (433)
..++..++++.|++++|||++..+...++.++.+|..+.+
T Consensus 169 ~~I~~~~~~~~Q~il~SATl~~~v~~l~~~~l~~p~~i~V 208 (209)
T d1q0ua_ 169 DQIAARMPKDLQMLVFSATIPEKLKPFLKKYMENPTFVHV 208 (209)
T ss_dssp HHHHHTSCTTCEEEEEESCCCGGGHHHHHHHCSSCEEEEC
T ss_pred HHHHHHCCCCCEEEEEEccCCHHHHHHHHHHCCCCEEEEe
Confidence 9999999999999999999999999999999999987754
No 11
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=1.2e-28 Score=199.38 Aligned_cols=150 Identities=29% Similarity=0.497 Sum_probs=138.2
Q ss_pred CCCceEEEEEcCchhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHH
Q 013962 205 TANVIQILEKVSENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESA 284 (433)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~ 284 (433)
..++.|.+..++...+...+...+.+ .+..++||||+++..++.++..|...++.+..+||+++..+|..+
T Consensus 4 l~~i~q~yi~v~~~~K~~~L~~ll~~---------~~~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~ 74 (171)
T d1s2ma2 4 LKGITQYYAFVEERQKLHCLNTLFSK---------LQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKV 74 (171)
T ss_dssp CTTEEEEEEECCGGGHHHHHHHHHHH---------SCCSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHH
T ss_pred ccceEEEEEEcCHHHHHHHHHHHHHh---------CCCCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhh
Confidence 45678889999888888888877754 345689999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCcEEEEecccccCcccCCCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEeccccHHHHHHHHHHhhh
Q 013962 285 LRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVAQIKKAIVD 363 (433)
Q Consensus 285 ~~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~~~~~~~~~~~ 363 (433)
++.|++|..++||||+++++|+|+|++++||+|++|+++..|+||+||+||.|+.|.+++++.+.|...+..+++.+..
T Consensus 75 ~~~f~~~~~~ilv~Td~~~~Gid~~~v~~VI~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~v~~~e~~~~~~i~~~l~~ 153 (171)
T d1s2ma2 75 FHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELGT 153 (171)
T ss_dssp HHHHHTTSSSEEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTCCEEEEEEECGGGHHHHHHHHHHHTC
T ss_pred hhhcccCccccccchhHhhhccccceeEEEEecCCcchHHHHHHHhhhcccCCCccEEEEEeCHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888888876543
No 12
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=1.1e-28 Score=197.02 Aligned_cols=146 Identities=32% Similarity=0.550 Sum_probs=125.0
Q ss_pred eEEEEEcCchh-hHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHH
Q 013962 209 IQILEKVSENE-KVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 287 (433)
Q Consensus 209 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~ 287 (433)
.|.+..+...+ +.+.+...+.. .+..++||||+++..++.+++.|...++.+..+||+++..+|..+++.
T Consensus 2 ~q~~~~v~~~e~K~~~L~~ll~~---------~~~~k~iIF~~s~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~l~~ 72 (162)
T d1fuka_ 2 KQFYVNVEEEEYKYECLTDLYDS---------ISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKE 72 (162)
T ss_dssp EEEEEEEESGGGHHHHHHHHHHH---------TTCSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHHh---------CCCCcEEEEEEEEchHHHHHHHHhhcCceEEEeccCCchhhHHHHHHH
Confidence 46666665444 66666665533 334679999999999999999999999999999999999999999999
Q ss_pred HhcCCCcEEEEecccccCcccCCCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEeccccHHHHHHHHHHhhh
Q 013962 288 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVAQIKKAIVD 363 (433)
Q Consensus 288 f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~~~~~~~~~~~ 363 (433)
|+.|+.+|||||+++++|+|+|++++||+||+|+++..|+||+||+||.|+.|.+++++++.|...+..+++.+..
T Consensus 73 f~~~~~~iLv~Tdv~~rGiDi~~v~~VI~~d~P~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~ 148 (162)
T d1fuka_ 73 FRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYST 148 (162)
T ss_dssp HHTTSCSEEEEEGGGTTTCCCCSCSEEEESSCCSSGGGGGGSSCSCC-----CEEEEEEETTTHHHHHHHHHHSSC
T ss_pred HhhcccceeeccccccccccCCCceEEEEeccchhHHHHHhhccccccCCCccEEEEEcCHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999888888776543
No 13
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.96 E-value=1.2e-28 Score=196.25 Aligned_cols=147 Identities=39% Similarity=0.577 Sum_probs=134.5
Q ss_pred CCceEEEEEcCchhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHH
Q 013962 206 ANVIQILEKVSENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESAL 285 (433)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~ 285 (433)
.++.+.+..++..++.+.+...+. ..+.++||||++++.++.+++.|+..++.+..+|++++..+|..++
T Consensus 2 ~nI~~~~i~v~~~~K~~~L~~ll~----------~~~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~~~r~~~~ 71 (155)
T d1hv8a2 2 ANIEQSYVEVNENERFEALCRLLK----------NKEFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVI 71 (155)
T ss_dssp SSSEEEEEECCGGGHHHHHHHHHC----------STTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCHHHHHHHH
T ss_pred CCeEEEEEEeChHHHHHHHHHHHc----------cCCCCEEEEECchHHHHHHHhhhcccccccccccccchhhhhhhhh
Confidence 467888899988888888776653 2235699999999999999999999999999999999999999999
Q ss_pred HHHhcCCCcEEEEecccccCcccCCCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEeccccHHHHHHHHHHhh
Q 013962 286 RDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVAQIKKAIV 362 (433)
Q Consensus 286 ~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~~~~~~~~~~ 362 (433)
++|++|+.++||||+++++|+|+|++++||++++|+|+..|+||+||+||.|+.|.+++++.+.|...+..+++.+.
T Consensus 72 ~~f~~~~~~ilv~T~~~~~Gid~~~v~~Vi~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~ 148 (155)
T d1hv8a2 72 RLFKQKKIRILIATDVMSRGIDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRREYKKLRYIERAMK 148 (155)
T ss_dssp HHHHTTSSSEEEECTTHHHHCCCSCCSEEEESSCCSCHHHHHHHSTTTCCSSSCCEEEEEECTTSHHHHHHHHHHHT
T ss_pred hhhhcccceeeeehhHHhhhhhhccCcEEEEecCCCCHHHHHHHHHhcCcCCCCceEEEEEchHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888776654
No 14
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=1.1e-28 Score=198.23 Aligned_cols=150 Identities=32% Similarity=0.549 Sum_probs=134.7
Q ss_pred CCCCceEEEEEcCch-hhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHH
Q 013962 204 PTANVIQILEKVSEN-EKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRE 282 (433)
Q Consensus 204 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~ 282 (433)
...++.|.+..++.. .+...+...+... +..++||||++++.++.+++.|...++.+..+||+++..+|.
T Consensus 4 tl~~i~q~~v~v~~~~~K~~~L~~ll~~~---------~~~k~iiF~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~ 74 (168)
T d2j0sa2 4 TLEGIKQFFVAVEREEWKFDTLCDLYDTL---------TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERE 74 (168)
T ss_dssp SCTTEEEEEEEESSTTHHHHHHHHHHHHH---------TSSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSCHHHHH
T ss_pred CCCCcEEEEEEecChHHHHHHHHHHHHhC---------CCCceEEEeeeHHHHHHHHHHhhhcccchhhhhhhhhHHHHH
Confidence 346778888888765 4777776665432 335799999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcEEEEecccccCcccCCCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEeccccHHHHHHHHHHhh
Q 013962 283 SALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVAQIKKAIV 362 (433)
Q Consensus 283 ~~~~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~~~~~~~~~~ 362 (433)
.+++.|++|+.++||||+++++|+|+|++++||+||+|+++..|+||+||+||.|+.|.+++++.+.|...++.+++.+.
T Consensus 75 ~~~~~fk~g~~~iLv~Td~~~rGiDi~~v~~VIn~d~P~~~~~yihR~GR~gR~g~~G~~i~~~~~~d~~~~~~i~~~~~ 154 (168)
T d2j0sa2 75 SIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYS 154 (168)
T ss_dssp HHHHHHHHTSSCEEEECGGGSSSCCCTTEEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEEGGGHHHHHHHHHHTT
T ss_pred HHHHHHhcCCccEEeccchhcccccccCcceEEEecCCcCHHHHHhhhccccccCCCcEEEEEECHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888877654
No 15
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.95 E-value=1.4e-27 Score=196.76 Aligned_cols=134 Identities=25% Similarity=0.461 Sum_probs=120.8
Q ss_pred CchhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcE
Q 013962 216 SENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNI 295 (433)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~v 295 (433)
...++...+...+.. .++.++||||+++..++.+++.|...++.+..+||+++..+|..+++.|++|+++|
T Consensus 13 ~~~~k~~~L~~~l~~---------~~~~~~IIF~~t~~~~~~l~~~l~~~~~~~~~~h~~~~~~~r~~~~~~f~~g~~~i 83 (200)
T d1oywa3 13 EKFKPLDQLMRYVQE---------QRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQI 83 (200)
T ss_dssp ECSSHHHHHHHHHHH---------TTTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTTSCSE
T ss_pred cCCcHHHHHHHHHHh---------cCCCCEEEEEeeehhhHHhhhhhccCCceeEEecCCCcHHHHHHHHHHHhcccceE
Confidence 344566666655543 33456999999999999999999999999999999999999999999999999999
Q ss_pred EEEecccccCcccCCCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEeccccHHHHHHHH
Q 013962 296 LVATDVASRGLDVMGVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVAQIK 358 (433)
Q Consensus 296 lv~T~~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~~~~~~ 358 (433)
||||+++++|+|+|++++||++++|.|+..|+||+||+||.|.+|.+++++.+.|...++++.
T Consensus 84 lvaTd~~~~GiD~p~v~~VI~~~~P~~~~~y~qr~GR~gR~g~~g~ai~~~~~~d~~~l~~~i 146 (200)
T d1oywa3 84 VVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL 146 (200)
T ss_dssp EEECTTSCTTTCCTTCCEEEESSCCSSHHHHHHHHTTSCTTSSCEEEEEEECHHHHHHHHHHH
T ss_pred EEecchhhhccCCCCCCEEEECCCccchHHHHHHhhhhhcCCCCceEEEecCHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999998887776554
No 16
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.95 E-value=5.9e-28 Score=202.28 Aligned_cols=176 Identities=20% Similarity=0.278 Sum_probs=135.7
Q ss_pred ccccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHH
Q 013962 3 DIEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEV 82 (433)
Q Consensus 3 ~~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~ 82 (433)
.|...|+.+|+|+|.+++..+++++++++++|||+|||.+++++++..+.. ++++++++|+++|+.|+++++
T Consensus 17 ~l~~~g~~~l~~~Q~~ai~~l~~~~~~il~apTGsGKT~~a~l~i~~~~~~--------~~~vl~l~P~~~L~~q~~~~~ 88 (202)
T d2p6ra3 17 ILKEEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIK--------GGKSLYVVPLRALAGEKYESF 88 (202)
T ss_dssp HHHCC---CCCCCCHHHHHHHTTCSCEEEECSSHHHHHHHHHHHHHHHHHT--------TCCEEEEESSHHHHHHHHHHH
T ss_pred HHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCchhHHHHHHHHHHhhc--------cCcceeecccHHHHHHHHHHH
Confidence 466889999999999999999999999999999999999998888877655 667999999999999999999
Q ss_pred HHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHH
Q 013962 83 KALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVM 162 (433)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~ 162 (433)
+++... ...+....++.... ......+.++++||..+...+......+..+++||+||+|.+.+..+...+..++
T Consensus 89 ~~~~~~--~~~v~~~~~~~~~~---~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~ii~DE~h~~~~~~r~~~~~~~l 163 (202)
T d2p6ra3 89 KKWEKI--GLRIGISTGDYESR---DEHLGDCDIIVTTSEKADSLIRNRASWIKAVSCLVVDEIHLLDSEKRGATLEILV 163 (202)
T ss_dssp TTTTTT--TCCEEEECSSCBCC---SSCSTTCSEEEEEHHHHHHHHHTTCSGGGGCCEEEETTGGGGGCTTTHHHHHHHH
T ss_pred HHHhhc--cccceeeccCcccc---cccccccceeeeccHHHHHHHhccchhhhhhhhccccHHHHhcccccchHHHHHH
Confidence 887654 34555555554322 1223467899999999998888877778889999999999988776555544443
Q ss_pred ---hhCCCCCcEEEEEeecchHHHHHHHHhcCCC
Q 013962 163 ---QNLPDKHQTLLFSATMPVEIEALAQEYLTDP 193 (433)
Q Consensus 163 ---~~~~~~~~~i~~SAT~~~~~~~~~~~~~~~~ 193 (433)
...+++.|+++||||+++ .... ..|+..+
T Consensus 164 ~~i~~~~~~~~~l~lSATl~n-~~~~-~~~l~~~ 195 (202)
T d2p6ra3 164 TKMRRMNKALRVIGLSATAPN-VTEI-AEWLDAD 195 (202)
T ss_dssp HHHHHHCTTCEEEEEECCCTT-HHHH-HHHTTCE
T ss_pred HHHHhcCCCCcEEEEcCCCCc-HHHH-HHHcCCC
Confidence 344668899999999865 3343 4565443
No 17
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=3e-27 Score=190.09 Aligned_cols=145 Identities=32% Similarity=0.557 Sum_probs=128.9
Q ss_pred ceEEEEEcCchhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHH
Q 013962 208 VIQILEKVSENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 287 (433)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~ 287 (433)
+.+.+..+..+.|.+.+...+... ...++||||+++..++.+++.|.+.++++..+||+|+..+|..+++.
T Consensus 2 l~q~~v~~~~~~K~~~L~~ll~~~---------~~~k~iIF~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~~r~~~l~~ 72 (168)
T d1t5ia_ 2 LQQYYVKLKDNEKNRKLFDLLDVL---------EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQ 72 (168)
T ss_dssp CEEEEEECCGGGHHHHHHHHHHHS---------CCSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHH
T ss_pred cEEEEEEeChHHHHHHHHHHHHhC---------CCCeEEEEEeeeecchhhhhhhccccccccccccccchhhhhhhhhh
Confidence 457788888888988888876542 33569999999999999999999999999999999999999999999
Q ss_pred HhcCCCcEEEEecccccCcccCCCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEecccc-HHHHHHHHHHh
Q 013962 288 FRNGSTNILVATDVASRGLDVMGVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRD-MLLVAQIKKAI 361 (433)
Q Consensus 288 f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d-~~~~~~~~~~~ 361 (433)
|++|+++|||||+++++|+|+|.+++||++++|+++..|+||+||+||.|+.|.+++++++.+ ...+..+++.+
T Consensus 73 F~~g~~~iLv~T~~~~~Gid~~~~~~vi~~~~p~~~~~yiqr~GR~gR~g~~g~~i~l~~~~~~~~~~~~i~~~~ 147 (168)
T d1t5ia_ 73 FKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRF 147 (168)
T ss_dssp HHTTSCSEEEESSCCSTTCCGGGCSEEEESSCCSSHHHHHHHHHHHTGGGCCCEEEEEECSHHHHHHHHHHHHHH
T ss_pred hccccceeeeccccccchhhcccchhhhhhhcccchhhHhhhhhhcccCCCccEEEEEECchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999987754 44555555443
No 18
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.94 E-value=1.8e-26 Score=185.36 Aligned_cols=149 Identities=28% Similarity=0.461 Sum_probs=125.2
Q ss_pred CCCceEEEEEcCc-hhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHH
Q 013962 205 TANVIQILEKVSE-NEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRES 283 (433)
Q Consensus 205 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~ 283 (433)
..++.|.+..++. ..+...+...+. .....++||||+++..++.++..|...++++..+||++++.+|..
T Consensus 3 l~~ikq~y~~~~~~~~K~~~L~~ll~---------~~~~~~~lIF~~~~~~~~~l~~~l~~~~~~~~~~hg~~~~~~R~~ 73 (168)
T d2rb4a1 3 LNNIRQYYVLCEHRKDKYQALCNIYG---------SITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRAS 73 (168)
T ss_dssp BCCEEEEEEECSSHHHHHHHHHHHHT---------TSCCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHH
T ss_pred ccccEEEEEEeCCHHHHHHHHHHHHH---------hCCCCcEEEEcCHHHHHHHHHHHHHhcCCcceecccchhhHHHHH
Confidence 3466777777764 345555444432 134578999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCcEEEEecccccCcccCCCcEEEEccCCC------ChhHHHhhcccCCCCCCceeEEEEeccccHHHHHHH
Q 013962 284 ALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK------TVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVAQI 357 (433)
Q Consensus 284 ~~~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~~------s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~~~~~ 357 (433)
++++|++|..++||||+++++|+|+|++++||+||.|+ ++..|+||+||+||.|+.|.++.++++.|...+..+
T Consensus 74 ~~~~F~~g~~~ilv~Td~~~~Gid~~~v~~Vi~yd~P~~~~~~~~~~~yihR~GR~gR~g~~g~~i~~~~~~d~~~l~~i 153 (168)
T d2rb4a1 74 IIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKI 153 (168)
T ss_dssp HHHHHHTTSCSEEEECCSCCTTTCCTTEEEEEESSCCC--CCSCCHHHHHHHHCBC----CCEEEEEEECGGGHHHHHHH
T ss_pred HhhhhcCCceeeeechhhhhhhhccccccEEEeecCCCcccccCCHHHHHHHhhhcccCCCceEEEEEEcHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 468899999999999999999999999998888777
Q ss_pred HHHhh
Q 013962 358 KKAIV 362 (433)
Q Consensus 358 ~~~~~ 362 (433)
++.+.
T Consensus 154 ~~~~~ 158 (168)
T d2rb4a1 154 QDHFN 158 (168)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 66543
No 19
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.94 E-value=3e-26 Score=191.93 Aligned_cols=167 Identities=22% Similarity=0.208 Sum_probs=130.9
Q ss_pred CCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhc
Q 013962 8 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSR 87 (433)
Q Consensus 8 ~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~ 87 (433)
.+-+|++||.++++.+.. +++++++|||+|||+++++++...+... +.++++++|+++|+.|+++++.+++.
T Consensus 6 ~~~~pr~~Q~~~~~~~~~-~n~lv~~pTGsGKT~i~~~~~~~~~~~~-------~~~il~i~P~~~L~~q~~~~~~~~~~ 77 (200)
T d1wp9a1 6 DLIQPRIYQEVIYAKCKE-TNCLIVLPTGLGKTLIAMMIAEYRLTKY-------GGKVLMLAPTKPLVLQHAESFRRLFN 77 (200)
T ss_dssp HHHCCCHHHHHHHHHGGG-SCEEEECCTTSCHHHHHHHHHHHHHHHS-------CSCEEEECSSHHHHHHHHHHHHHHBC
T ss_pred CCCCCCHHHHHHHHHHhc-CCeEEEeCCCCcHHHHHHHHHHHHHHhc-------CCcEEEEcCchHHHHHHHHHHHHhhc
Confidence 345899999999998875 5799999999999999888777666543 67899999999999999999999986
Q ss_pred cCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHHhhCCC
Q 013962 88 SLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPD 167 (433)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~ 167 (433)
.. +..+....++........ ...+..++++||+.+.+.+......+.++++||+||||++.+................
T Consensus 78 ~~-~~~v~~~~~~~~~~~~~~-~~~~~~i~i~t~~~~~~~~~~~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~ 155 (200)
T d1wp9a1 78 LP-PEKIVALTGEKSPEERSK-AWARAKVIVATPQTIENDLLAGRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAK 155 (200)
T ss_dssp SC-GGGEEEECSCSCHHHHHH-HHHHCSEEEECHHHHHHHHHTTSCCTTSCSEEEEETGGGCSTTCHHHHHHHHHHHHCS
T ss_pred cc-ccceeeeecccchhHHHH-hhhcccccccccchhHHHHhhhhhhccccceEEEEehhhhhcchhHHHHHHHHHhcCC
Confidence 53 577777777766655443 3344689999999999988888888889999999999998765433333333333345
Q ss_pred CCcEEEEEeecchHHHH
Q 013962 168 KHQTLLFSATMPVEIEA 184 (433)
Q Consensus 168 ~~~~i~~SAT~~~~~~~ 184 (433)
.++++++||||......
T Consensus 156 ~~~~l~~SATp~~~~~~ 172 (200)
T d1wp9a1 156 NPLVIGLTASPGSTPEK 172 (200)
T ss_dssp SCCEEEEESCSCSSHHH
T ss_pred CCcEEEEEecCCCcHHH
Confidence 67899999999654443
No 20
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=99.94 E-value=3e-26 Score=181.18 Aligned_cols=128 Identities=26% Similarity=0.343 Sum_probs=110.0
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEE
Q 013962 218 NEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILV 297 (433)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv 297 (433)
....+.++..+.+.. ..+.++||||+++..|+.+++.|...|+.+..+||+|++.+|..++++|++|+++|||
T Consensus 14 ~~qv~dll~~i~~~~-------~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLV 86 (174)
T d1c4oa2 14 ENQILDLMEGIRERA-------ARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLV 86 (174)
T ss_dssp TTHHHHHHHHHHHHH-------HTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTTSCSEEE
T ss_pred CCCHHHHHHHHHHHH-------hcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHCCCeEEEE
Confidence 345566666655543 2356799999999999999999999999999999999999999999999999999999
Q ss_pred EecccccCcccCCCcEEEEccCCC-----ChhHHHhhcccCCCCCCceeEEEEeccccHHH
Q 013962 298 ATDVASRGLDVMGVAHVVNLDLPK-----TVEDYVHRIGRTGRGGSMGQATSFYTDRDMLL 353 (433)
Q Consensus 298 ~T~~~~~Gidip~~~~Vi~~~~~~-----s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~ 353 (433)
||+++++|+|+|++++||++++|. |..+|+|++||+||.|+ |.+++++.......
T Consensus 87 aT~v~~~GiDip~V~~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~-g~~~~~~~~~~~~~ 146 (174)
T d1c4oa2 87 GINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAR-GEVWLYADRVSEAM 146 (174)
T ss_dssp ESCCCCTTCCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSCCHHH
T ss_pred eeeeeeeeccCCCCcEEEEeccccccccchhHHHHHHhhhhhhcCC-CeeEEeecCCCHHH
Confidence 999999999999999999999876 45789999999999876 77776766555443
No 21
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.94 E-value=6.8e-27 Score=196.58 Aligned_cols=172 Identities=20% Similarity=0.266 Sum_probs=129.2
Q ss_pred cCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHH
Q 013962 6 FHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKAL 85 (433)
Q Consensus 6 ~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~ 85 (433)
.+||.+|||+|.+|++++++|+|+++.+|||+|||++|.+|++.. ..++++++|+++|+.|+.+.++.+
T Consensus 20 ~fg~~~~rp~Q~~ai~~~l~g~~vlv~apTGsGKT~~~~~~~~~~-----------~~~~~~v~P~~~L~~q~~~~l~~~ 88 (206)
T d1oywa2 20 TFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLL-----------NGLTVVVSPLISLMKDQVDQLQAN 88 (206)
T ss_dssp TTCCSSCCTTHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHS-----------SSEEEEECSCHHHHHHHHHHHHHT
T ss_pred hcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCCCcchhhhhhhhc-----------cCceEEeccchhhhhhHHHHHHhh
Confidence 469999999999999999999999999999999999999888754 778999999999999999999886
Q ss_pred hccCCCceEEEEECCCCHH----HHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCH--HH--
Q 013962 86 SRSLDSFKTAIVVGGTNIA----EQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFE--PQ-- 157 (433)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~--~~-- 157 (433)
. ............. ...........|+++|+..+.............++++|+||||++.+++.. ..
T Consensus 89 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~~~~~~~~v~~lviDEaH~~~~~~~~~~~~~~ 163 (206)
T d1oywa2 89 G-----VAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYA 163 (206)
T ss_dssp T-----CCEEEECTTSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTTHHHHHTTSCEEEEEESSGGGGCTTSSCCCHHHH
T ss_pred c-----ccccccccccccccchhHHHHHhcCCceEEEEechhhhchhhcccchhheeeeeeeeeeeeeeccccchHHHHH
Confidence 4 3334444443322 222234567899999999885444333345667999999999998876532 22
Q ss_pred -HHHHHhhCCCCCcEEEEEeecchHHHHHHHHh--cCCCe
Q 013962 158 -IREVMQNLPDKHQTLLFSATMPVEIEALAQEY--LTDPV 194 (433)
Q Consensus 158 -~~~~~~~~~~~~~~i~~SAT~~~~~~~~~~~~--~~~~~ 194 (433)
+..+...+ ++.|++++|||+++.+.+.+..+ +.+|+
T Consensus 164 ~~~~l~~~~-~~~~ii~lSATl~~~v~~di~~~L~l~~p~ 202 (206)
T d1oywa2 164 ALGQLRQRF-PTLPFMALTATADDTTRQDIVRLLGLNDPL 202 (206)
T ss_dssp GGGGHHHHC-TTSCEEEEESCCCHHHHHHHHHHHTCCSCE
T ss_pred HHHHHHHhC-CCCceEEEEeCCCHHHHHHHHHHcCCCCCc
Confidence 23334445 46899999999998876544433 56774
No 22
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.93 E-value=1.7e-27 Score=204.74 Aligned_cols=168 Identities=18% Similarity=0.167 Sum_probs=125.0
Q ss_pred cccCCCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHH
Q 013962 4 IEFHEYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 83 (433)
Q Consensus 4 ~~~~~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~ 83 (433)
+-..++.+|+++|+++++.++.|+++++.+|||+|||++++++++..... +++++|++|+++|+.|++++++
T Consensus 36 ~~~~~~~~p~~~Q~~~i~~~l~g~~~~i~apTGsGKT~~~~~~~~~~~~~--------~~rvliv~Pt~~La~Q~~~~l~ 107 (237)
T d1gkub1 36 FFRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALK--------GKRCYVIFPTSLLVIQAAETIR 107 (237)
T ss_dssp HHHTTTCSCCHHHHHHHHHHHTTCCEECCCCBTSCSHHHHHHHHHHHHTT--------SCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHhccCCCCHHHHHHHHHHHCCCCEEEEecCCChHHHHHHHHHHHHHHh--------cCeEEEEeccHHHHHHHHHHHH
Confidence 44567889999999999999999999999999999999998888766543 7789999999999999999999
Q ss_pred HHhccCC---CceEEEEECCCCHHHHHHHh--hCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHH
Q 013962 84 ALSRSLD---SFKTAIVVGGTNIAEQRSEL--RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQI 158 (433)
Q Consensus 84 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~ 158 (433)
+++...+ ...+....++.........+ ..+++|+|+||+.+.+. ...+.++++||+||+|.+++.+. ..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ilv~Tp~~l~~~----~~~~~~~~~vVvDE~d~~l~~~~--~~ 181 (237)
T d1gkub1 108 KYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKH----YRELGHFDFIFVDDVDAILKASK--NV 181 (237)
T ss_dssp HHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHC----STTSCCCSEEEESCHHHHHTSTH--HH
T ss_pred HHHHHcCCceEEEEeeeecccchhhhhhhhccccccceeccChHHHHHh----hhhcCCCCEEEEEChhhhhhccc--ch
Confidence 9976542 22334444444444433333 34578999999988653 33467899999999999876532 22
Q ss_pred HHHHhh-------------CCCCCcEEEEEeecchHHHHH
Q 013962 159 REVMQN-------------LPDKHQTLLFSATMPVEIEAL 185 (433)
Q Consensus 159 ~~~~~~-------------~~~~~~~i~~SAT~~~~~~~~ 185 (433)
...+.. .+...|++++|||++......
T Consensus 182 ~~~~~~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~~~~~ 221 (237)
T d1gkub1 182 DKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGKKAE 221 (237)
T ss_dssp HHHHHHTTEEEETTTTEEEECCSSEEEECCCCSCCCTTHH
T ss_pred hHHHHhcCChHHHHHHHhhCCCCCeEEEEeCCCCcccHHH
Confidence 222221 234568999999998655443
No 23
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=99.93 E-value=2.2e-25 Score=179.66 Aligned_cols=127 Identities=24% Similarity=0.375 Sum_probs=107.9
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEE
Q 013962 218 NEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILV 297 (433)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv 297 (433)
..+++.++..+.+.. ..+.++||||+++..++.+++.|+..|+++..+||+|++.+|..+++.|++|+++|||
T Consensus 14 ~~qvd~ll~~i~~~~-------~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLV 86 (181)
T d1t5la2 14 KGQIDDLIGEIRERV-------ERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLV 86 (181)
T ss_dssp TTHHHHHHHHHHHHH-------HTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHHTSCSEEE
T ss_pred CCcHHHHHHHHHHHH-------hcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHHHHHHHHHHCCCCCEEE
Confidence 445566666655433 2235699999999999999999999999999999999999999999999999999999
Q ss_pred EecccccCcccCCCcEEEEccCCC-----ChhHHHhhcccCCCCCCceeEEEEeccccHH
Q 013962 298 ATDVASRGLDVMGVAHVVNLDLPK-----TVEDYVHRIGRTGRGGSMGQATSFYTDRDML 352 (433)
Q Consensus 298 ~T~~~~~Gidip~~~~Vi~~~~~~-----s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~ 352 (433)
||+++++|+|+|++++||+|+.|. |...|+||+||+||.|. |.+.+++......
T Consensus 87 aTdv~~rGiDip~v~~VI~~d~p~~~~~~s~~~yi~R~GRagR~g~-~~~~~~~~~~~~~ 145 (181)
T d1t5la2 87 GINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAN-GHVIMYADTITKS 145 (181)
T ss_dssp ESCCCSSSCCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTT-CEEEEECSSCCHH
T ss_pred ehhHHHccCCCCCCCEEEEecCCcccccccHHHHHHHHHhhccccC-ceeEeecchhhHH
Confidence 999999999999999999999995 68899999999999986 4444444444433
No 24
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.87 E-value=3.7e-23 Score=158.65 Aligned_cols=99 Identities=30% Similarity=0.454 Sum_probs=89.4
Q ss_pred CCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecccccCcccCCCcEEEEcc---
Q 013962 242 FPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLD--- 318 (433)
Q Consensus 242 ~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~--- 318 (433)
.+++||||+++..|+.+++.|+..++.+..+|++++.. .|++|+.+|||||+++++|+| |+++.||+++
T Consensus 35 ~~k~IVFc~t~~~ae~la~~L~~~G~~~~~~H~~~~~~-------~~~~~~~~vlvaTd~~~~GiD-~~v~~Vi~~~~~~ 106 (138)
T d1jr6a_ 35 GGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVS-------VIPTNGDVVVVATDALMTGFT-GDFDSVIDCNTSD 106 (138)
T ss_dssp TSCEEEECSCHHHHHHHHHHHHHHTCEEEEECTTCCSC-------CCTTSSCEEEEESSSSCSSSC-CCBSEEEECSEET
T ss_pred CCCEEEEeCcHHHHHHHHHHHhccccchhhhhccchhh-------hhhhhhcceeehhHHHHhccc-cccceEEEEEecC
Confidence 35699999999999999999999999999999999854 478899999999999999999 9999999854
Q ss_pred -CCCChhHHHhhcccCCCCCCceeEEEEecccc
Q 013962 319 -LPKTVEDYVHRIGRTGRGGSMGQATSFYTDRD 350 (433)
Q Consensus 319 -~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d 350 (433)
+|.+...|+||+||+|| |++|. +.++.+.|
T Consensus 107 ~~P~~~~~y~qr~GR~gR-g~~G~-~~~i~~~e 137 (138)
T d1jr6a_ 107 GKPQDAVSRTQRRGRTGR-GKPGI-YRFVAPGE 137 (138)
T ss_dssp TEECCHHHHHHHHTTBCS-SSCEE-EEECCSSC
T ss_pred CCCCCHHHHHhHhccccC-CCCcE-EEEEcCCC
Confidence 69999999999999999 89885 66777665
No 25
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.87 E-value=2.1e-21 Score=161.51 Aligned_cols=158 Identities=23% Similarity=0.231 Sum_probs=124.5
Q ss_pred CCcHHHHHHHHHhhc----C--CcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHH
Q 013962 11 RPTSIQAQAMPVALS----G--RDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKA 84 (433)
Q Consensus 11 ~~~~~Q~~~i~~~~~----~--~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~ 84 (433)
.+++-|..++..+.+ + .+.+++|+||||||.+|+..+...+.. |.++++++|+..|+.|+++.+++
T Consensus 55 ~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~--------g~qv~~l~Pt~~La~Q~~~~~~~ 126 (233)
T d2eyqa3 55 ETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDN--------HKQVAVLVPTTLLAQQHYDNFRD 126 (233)
T ss_dssp CCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTT--------TCEEEEECSSHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHc--------CCceEEEccHHHhHHHHHHHHHH
Confidence 789999999988863 2 368999999999999999888887655 99999999999999999999999
Q ss_pred HhccCCCceEEEEECCCCHHHHHH----HhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHH
Q 013962 85 LSRSLDSFKTAIVVGGTNIAEQRS----ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIRE 160 (433)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~ 160 (433)
++..+ +.++..+++.....+... ...+..+|+|+|...+. ....+.++++||+||-|++... -..
T Consensus 127 ~~~~~-~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~-----~~~~f~~LgLiIiDEeH~fg~k-----Q~~ 195 (233)
T d2eyqa3 127 RFANW-PVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQ-----SDVKFKDLGLLIVDEEHRFGVR-----HKE 195 (233)
T ss_dssp HSTTT-TCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHH-----SCCCCSSEEEEEEESGGGSCHH-----HHH
T ss_pred HHhhC-CCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhc-----cCCccccccceeeechhhhhhH-----HHH
Confidence 98765 688889998887654433 33567899999976664 3466788999999999986532 122
Q ss_pred HHhhCCCCCcEEEEEeecchHHHHHHH
Q 013962 161 VMQNLPDKHQTLLFSATMPVEIEALAQ 187 (433)
Q Consensus 161 ~~~~~~~~~~~i~~SAT~~~~~~~~~~ 187 (433)
.+.....++.++.+||||.+.....+.
T Consensus 196 ~l~~~~~~~~~l~~SATPiprtl~~~~ 222 (233)
T d2eyqa3 196 RIKAMRANVDILTLTATPIPRTLNMAM 222 (233)
T ss_dssp HHHHHHTTSEEEEEESSCCCHHHHHHH
T ss_pred HHHhhCCCCCEEEEecchhHHHHHHHH
Confidence 223334567899999999988765544
No 26
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.87 E-value=1.8e-22 Score=168.51 Aligned_cols=136 Identities=19% Similarity=0.139 Sum_probs=103.7
Q ss_pred CCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCC
Q 013962 11 RPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLD 90 (433)
Q Consensus 11 ~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~ 90 (433)
+|++||++++..+.++++.++.+|||+|||++++..+... +.++||+||+++|+.||.+++..+..
T Consensus 70 ~Lr~yQ~eav~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~-----------~~~~Liv~p~~~L~~q~~~~~~~~~~--- 135 (206)
T d2fz4a1 70 SLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAINEL-----------STPTLIVVPTLALAEQWKERLGIFGE--- 135 (206)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEESSSTTHHHHHHHHHHHS-----------CSCEEEEESSHHHHHHHHHHHGGGCG---
T ss_pred CcCHHHHHHHHHHHhCCCcEEEeCCCCCceehHHhHHHHh-----------cCceeEEEcccchHHHHHHHHHhhcc---
Confidence 7999999999999999999999999999999875443222 56799999999999999999988642
Q ss_pred CceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHHhhCCCCCc
Q 013962 91 SFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 170 (433)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~ 170 (433)
..+....|+.. ....|+++|++.+...... ...++++||+||||++... .+..++..++ ...
T Consensus 136 -~~~~~~~~~~~---------~~~~i~i~t~~~~~~~~~~---~~~~~~lvIiDEaH~~~a~----~~~~i~~~~~-~~~ 197 (206)
T d2fz4a1 136 -EYVGEFSGRIK---------ELKPLTVSTYDSAYVNAEK---LGNRFMLLIFDEVHHLPAE----SYVQIAQMSI-APF 197 (206)
T ss_dssp -GGEEEESSSCB---------CCCSEEEEEHHHHHHTHHH---HTTTCSEEEEECSSCCCTT----THHHHHHTCC-CSE
T ss_pred -cchhhcccccc---------cccccccceehhhhhhhHh---hCCcCCEEEEECCeeCCcH----HHHHHHhccC-CCc
Confidence 33445544432 3468999999988655442 1346899999999998643 3455555554 456
Q ss_pred EEEEEeec
Q 013962 171 TLLFSATM 178 (433)
Q Consensus 171 ~i~~SAT~ 178 (433)
.++||||+
T Consensus 198 ~lgLTATl 205 (206)
T d2fz4a1 198 RLGLTATF 205 (206)
T ss_dssp EEEEEESC
T ss_pred EEEEecCC
Confidence 78999997
No 27
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.87 E-value=1.8e-21 Score=165.19 Aligned_cols=161 Identities=24% Similarity=0.262 Sum_probs=124.1
Q ss_pred CCCCCCcHHHHHHHHHhhc----C--CcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHH
Q 013962 7 HEYTRPTSIQAQAMPVALS----G--RDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEK 80 (433)
Q Consensus 7 ~~~~~~~~~Q~~~i~~~~~----~--~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~ 80 (433)
+.| .||+-|.+|+..+.. + .+.+++|+||||||.+|+..++..+.. |.++++++||..|+.|+++
T Consensus 80 LPF-eLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~--------g~q~~~m~Pt~~La~Qh~~ 150 (264)
T d1gm5a3 80 LPF-KLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEA--------GFQTAFMVPTSILAIQHYR 150 (264)
T ss_dssp SSS-CCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHH--------TSCEEEECSCHHHHHHHHH
T ss_pred ccc-cCCchHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHHhc--------ccceeEEeehHhhhHHHHH
Confidence 444 799999999999863 2 368999999999999999988887766 8899999999999999999
Q ss_pred HHHHHhccCCCceEEEEECCCCHHHHHHH----hhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHH
Q 013962 81 EVKALSRSLDSFKTAIVVGGTNIAEQRSE----LRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEP 156 (433)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~ 156 (433)
.+.+++..+ ++.+..++|+....+.... ..++.+|+|+|..-+.+ ...+.++++|||||-|++.....
T Consensus 151 ~~~~~f~~~-~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~-----~~~f~~LglviiDEqH~fgv~Qr-- 222 (264)
T d1gm5a3 151 RTVESFSKF-NIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQE-----DVHFKNLGLVIIDEQHRFGVKQR-- 222 (264)
T ss_dssp HHHHHHTCS-SCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHH-----CCCCSCCCEEEEESCCCC-------
T ss_pred HHHHhhhhc-cccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcC-----CCCccccceeeeccccccchhhH--
Confidence 999999775 6889999998876554432 34679999999776653 35567899999999998764321
Q ss_pred HHHHHHhhCCCCCcEEEEEeecchHHHHHHH
Q 013962 157 QIREVMQNLPDKHQTLLFSATMPVEIEALAQ 187 (433)
Q Consensus 157 ~~~~~~~~~~~~~~~i~~SAT~~~~~~~~~~ 187 (433)
..+..-...+.++.|||||.++......
T Consensus 223 ---~~l~~~~~~~~~l~~SATPiprtl~~~~ 250 (264)
T d1gm5a3 223 ---EALMNKGKMVDTLVMSATPIPRSMALAF 250 (264)
T ss_dssp ---CCCCSSSSCCCEEEEESSCCCHHHHHHH
T ss_pred ---HHHHHhCcCCCEEEEECCCCHHHHHHHH
Confidence 1111122357899999999888765543
No 28
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.86 E-value=2.3e-22 Score=175.34 Aligned_cols=153 Identities=15% Similarity=0.170 Sum_probs=112.7
Q ss_pred CCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCC
Q 013962 11 RPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLD 90 (433)
Q Consensus 11 ~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~ 90 (433)
+||+||.+|+..++.+++.++.+|||+|||+++...+ ..+.... ..++||+||+++|+.||++++.++....
T Consensus 113 ~~rdyQ~~av~~~l~~~~~il~~pTGsGKT~i~~~i~-~~~~~~~------~~k~Liivp~~~Lv~Q~~~~f~~~~~~~- 184 (282)
T d1rifa_ 113 EPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLA-RYYLENY------EGKILIIVPTTALTTQMADDFVDYRLFS- 184 (282)
T ss_dssp CCCHHHHHHHHHHHHHSEEEECCCTTSCHHHHHHHHH-HHHHHHC------SSEEEEECSSHHHHHHHHHHHHHHTSCC-
T ss_pred ccchHHHHHHHHHHhcCCceeEEEcccCccHHHHHHH-HHhhhcc------cceEEEEEcCchhHHHHHHHHHHhhccc-
Confidence 6999999999999999999999999999999875544 3333332 5689999999999999999999986432
Q ss_pred CceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHHhhCCCCCc
Q 013962 91 SFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 170 (433)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~ 170 (433)
...+....++..... .......++++|++++.+... ..+.++++||+||||++. ...+..++..+.+...
T Consensus 185 ~~~~~~~~~g~~~~~---~~~~~~~i~i~t~qs~~~~~~---~~~~~f~~VIvDEaH~~~----a~~~~~il~~~~~~~~ 254 (282)
T d1rifa_ 185 HAMIKKIGGGASKDD---KYKNDAPVVVGTWQTVVKQPK---EWFSQFGMMMNDECHLAT----GKSISSIISGLNNCMF 254 (282)
T ss_dssp GGGEEECSTTCSSTT---CCCTTCSEEEECHHHHTTSCG---GGGGGEEEEEEETGGGCC----HHHHHHHTTTCTTCCE
T ss_pred cccceeecceecccc---cccccceEEEEeeehhhhhcc---cccCCCCEEEEECCCCCC----chhHHHHHHhccCCCe
Confidence 334444444433211 122357899999988754322 235679999999999875 4456777777765555
Q ss_pred EEEEEeecchH
Q 013962 171 TLLFSATMPVE 181 (433)
Q Consensus 171 ~i~~SAT~~~~ 181 (433)
.++|||||+..
T Consensus 255 rlGlTaT~~~~ 265 (282)
T d1rifa_ 255 KFGLSGSLRDG 265 (282)
T ss_dssp EEEECSSCCTT
T ss_pred EEEEEeecCCC
Confidence 69999998644
No 29
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.84 E-value=5.1e-21 Score=168.64 Aligned_cols=128 Identities=29% Similarity=0.399 Sum_probs=106.2
Q ss_pred hhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecC--------CCCHHHHHHHHHHHhc
Q 013962 219 EKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHG--------GRNQSDRESALRDFRN 290 (433)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~--------~~~~~~r~~~~~~f~~ 290 (433)
.|...+...+.+.... .++.++||||+++..++.+++.|...++++..++| +++..+|..+++.|++
T Consensus 143 pK~~~l~~~l~~~~~~-----~~~~k~iiF~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~ 217 (286)
T d1wp9a2 143 PKMDKLKEIIREQLQR-----KQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFAR 217 (286)
T ss_dssp HHHHHHHHHHHHHHHH-----CTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECCSSCC-------CCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHh-----CCCCcEEEEeCcHHhHHHHHHHHHHcCCceEEeeccccccccchhchHHHHHHHHHHHc
Confidence 4555555554433221 34567999999999999999999999999888866 5666789999999999
Q ss_pred CCCcEEEEecccccCcccCCCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEeccccHH
Q 013962 291 GSTNILVATDVASRGLDVMGVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDML 352 (433)
Q Consensus 291 g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~ 352 (433)
|+++|||||+++++|+|+|+|++||+||+|+|+..|+||+||+||.+ .|.++.++++....
T Consensus 218 g~~~vLv~T~~~~~Gld~~~~~~Vi~~d~~~~~~~~~Qr~GR~gR~~-~~~~~~l~~~~~~e 278 (286)
T d1wp9a2 218 GEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHM-PGRVIILMAKGTRD 278 (286)
T ss_dssp TSCSEEEECGGGGGGGGSTTCCEEEESSCCHHHHHHHHHHTTSCSCC-CSEEEEEEETTSHH
T ss_pred CCCcEEEEccceeccccCCCCCEEEEeCCCCCHHHHHHHHHhCCCCC-CCEEEEEEeCCCHH
Confidence 99999999999999999999999999999999999999999999975 58888888876544
No 30
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.84 E-value=9.6e-20 Score=146.77 Aligned_cols=155 Identities=16% Similarity=0.165 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHC--CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEec
Q 013962 223 RLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAE--GLHAVALHGGRNQSDRESALRDFRNGSTNILVATD 300 (433)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~ 300 (433)
.+...+.+.. ..++++.+.||.++..+.+.+.+.+. +.++..+||.|+++++..++.+|.+|+++|||||+
T Consensus 19 ~i~~~I~~El-------~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~Tt 91 (211)
T d2eyqa5 19 VVREAILREI-------LRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTT 91 (211)
T ss_dssp HHHHHHHHHH-------TTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESS
T ss_pred HHHHHHHHHH-------HcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEeh
Confidence 3455555443 55678999999999999999999875 67899999999999999999999999999999999
Q ss_pred ccccCcccCCCcEEEEccCCC-ChhHHHhhcccCCCCCCceeEEEEecccc---HHHHHHHHHHhhhhcccccccchhhh
Q 013962 301 VASRGLDVMGVAHVVNLDLPK-TVEDYVHRIGRTGRGGSMGQATSFYTDRD---MLLVAQIKKAIVDAESGNAVAFATGK 376 (433)
Q Consensus 301 ~~~~Gidip~~~~Vi~~~~~~-s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d---~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (433)
+++.|+|+|+++++|+.+... ..+++.|.+||+||.+..+.|++++.... ..-.++++......+.+..+.+++.+
T Consensus 92 vIEvGiDvpnA~~iiI~~a~rfGLaQLhQLRGRVGR~~~~s~c~l~~~~~~~~~~~a~~RL~~l~~~~dlg~GF~iA~~D 171 (211)
T d2eyqa5 92 IIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHD 171 (211)
T ss_dssp TTGGGSCCTTEEEEEETTTTSSCHHHHHHHHTTCCBTTBCEEEEEEECCGGGSCHHHHHHHHHHTTCCSBSHHHHHHHHH
T ss_pred hhhhccCCCCCcEEEEecchhccccccccccceeeecCccceEEEEecCCcCCCchHHHHHHHHHhcccCCcceeeeHhH
Confidence 999999999999999988874 89999999999999999999999986542 33334444333333334456666666
Q ss_pred HHHHHHHH
Q 013962 377 VARRKERE 384 (433)
Q Consensus 377 ~~~~~~~~ 384 (433)
...|..-.
T Consensus 172 L~iRG~G~ 179 (211)
T d2eyqa5 172 LEIRGAGE 179 (211)
T ss_dssp HHHHHHHH
T ss_pred HhhcCCcc
Confidence 65554443
No 31
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.83 E-value=2.6e-21 Score=158.02 Aligned_cols=134 Identities=20% Similarity=0.288 Sum_probs=104.3
Q ss_pred hhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHH--------HHHHHHHC---CCceeeecCCCCHHHHHHHHH
Q 013962 218 NEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDE--------VSEALVAE---GLHAVALHGGRNQSDRESALR 286 (433)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~--------l~~~L~~~---~~~~~~~~~~~~~~~r~~~~~ 286 (433)
.++.+.+...+.+.. ..++++.+.||.+++.+. ..+.|.+. +.++..+||.|++++|..+++
T Consensus 12 ~~~~~~v~~~I~~el-------~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~ 84 (206)
T d1gm5a4 12 MDRVNEVYEFVRQEV-------MRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVML 84 (206)
T ss_dssp SSTHHHHHHHHHHHT-------TTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHH
T ss_pred cccHHHHHHHHHHHH-------HcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHH
Confidence 345566666666544 445568888988765543 33334332 567889999999999999999
Q ss_pred HHhcCCCcEEEEecccccCcccCCCcEEEEccCCC-ChhHHHhhcccCCCCCCceeEEEEeccccHHHHHHHH
Q 013962 287 DFRNGSTNILVATDVASRGLDVMGVAHVVNLDLPK-TVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVAQIK 358 (433)
Q Consensus 287 ~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~~-s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~~~~~~ 358 (433)
+|.+|+++|||||+++++|||+|+++++|++++|. ..+++.|.+||+||.|..|.|++++.+.+....++++
T Consensus 85 ~F~~g~~~iLVaTtViE~GIDip~a~~iii~~a~~fglsqlhQlrGRvGR~~~~~~~~l~~~~~~~~~~~rl~ 157 (206)
T d1gm5a4 85 EFAEGRYDILVSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAMERLR 157 (206)
T ss_dssp HHTTTSSSBCCCSSCCCSCSCCTTCCEEEBCSCSSSCTTHHHHHHHTSCCSSTTCEEECCCCSCCHHHHHHHH
T ss_pred HHHCCCEEEEEEehhhhccccccCCcEEEEEccCCccHHHHHhhhhheeeccccceeEeeeccccccchhhhh
Confidence 99999999999999999999999999999999886 7999999999999999999999999876665555553
No 32
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.83 E-value=6e-21 Score=157.42 Aligned_cols=111 Identities=24% Similarity=0.309 Sum_probs=96.0
Q ss_pred CCeEEEEEeccccHHHHHHHHHHC------------------------------CCceeeecCCCCHHHHHHHHHHHhcC
Q 013962 242 FPLTIVFVERKTRCDEVSEALVAE------------------------------GLHAVALHGGRNQSDRESALRDFRNG 291 (433)
Q Consensus 242 ~~~~lvf~~~~~~~~~l~~~L~~~------------------------------~~~~~~~~~~~~~~~r~~~~~~f~~g 291 (433)
++++||||+|+..|+.++..|... ...+..+|++|++.+|..+++.|++|
T Consensus 40 ~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~g 119 (201)
T d2p6ra4 40 NGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRRG 119 (201)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHTT
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhCC
Confidence 356999999999999888887542 12378899999999999999999999
Q ss_pred CCcEEEEecccccCcccCCCcEEEE-------ccCCCChhHHHhhcccCCCCCC--ceeEEEEeccccHH
Q 013962 292 STNILVATDVASRGLDVMGVAHVVN-------LDLPKTVEDYVHRIGRTGRGGS--MGQATSFYTDRDML 352 (433)
Q Consensus 292 ~~~vlv~T~~~~~Gidip~~~~Vi~-------~~~~~s~~~~~Q~~GR~~R~g~--~g~~~~~~~~~d~~ 352 (433)
.++|||||+++++|+|+|...+||. .+.|.+..+|.||+|||||.|. .|.+++++.+.+..
T Consensus 120 ~i~vlvaT~~l~~Gin~p~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRAGR~g~~~~G~~~l~~~~~~~~ 189 (201)
T d2p6ra4 120 NIKVVVATPTLAAGVNLPARRVIVRSLYRFDGYSKRIKVSEYKQMAGRAGRPGMDERGEAIIIVGKRDRE 189 (201)
T ss_dssp SCCEEEECSTTTSSSCCCBSEEEECCSEEESSSEEECCHHHHHHHHTTBSCTTTCSCEEEEEECCGGGHH
T ss_pred CceEEEechHHHhhcCCCCceEEEecceeccCCcCCCCHHHHHHHhcccCCCCCCCeeEEEEEeCCCChH
Confidence 9999999999999999998888886 5667899999999999999985 68888888776654
No 33
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.80 E-value=3.4e-20 Score=145.29 Aligned_cols=136 Identities=21% Similarity=0.229 Sum_probs=91.7
Q ss_pred hhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCC
Q 013962 23 ALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 102 (433)
Q Consensus 23 ~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (433)
+..++++++.+|||+|||.+++..++...... +.++++++|++.+++|+++.+... ...+....+..
T Consensus 4 l~~~~~~il~~~tGsGKT~~~~~~~~~~~~~~-------~~~vli~~p~~~l~~q~~~~~~~~-----~~~~~~~~~~~- 70 (140)
T d1yksa1 4 LKKGMTTVLDFHPGAGKTRRFLPQILAECARR-------RLRTLVLAPTRVVLSEMKEAFHGL-----DVKFHTQAFSA- 70 (140)
T ss_dssp TSTTCEEEECCCTTSSTTTTHHHHHHHHHHHT-------TCCEEEEESSHHHHHHHHHHTTTS-----CEEEESSCCCC-
T ss_pred HHcCCcEEEEcCCCCChhHHHHHHHHHHhhhc-------CceeeeeecchhHHHHHHHHhhhh-----hhhhccccccc-
Confidence 34678999999999999988877766666553 778999999999999988766432 22222111111
Q ss_pred HHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCH-HHHHHHHhhCCCCCcEEEEEeecc
Q 013962 103 IAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFE-PQIREVMQNLPDKHQTLLFSATMP 179 (433)
Q Consensus 103 ~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~-~~~~~~~~~~~~~~~~i~~SAT~~ 179 (433)
.......+.+.|...+..... ....+.++++||+||||++...+.. ..+...+.. .++.++++||||||
T Consensus 71 ------~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~-~~~~~~l~lTATPp 140 (140)
T d1yksa1 71 ------HGSGREVIDAMCHATLTYRML-EPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRAR-ANESATILMTATPP 140 (140)
T ss_dssp ------CCCSSCCEEEEEHHHHHHHHT-SSSCCCCCSEEEETTTTCCSHHHHHHHHHHHHHHH-TTSCEEEEECSSCT
T ss_pred ------ccccccchhhhhHHHHHHHHh-ccccccceeEEEEccccccChhhHHHHHHHHHHhh-CCCCCEEEEEcCCC
Confidence 111335677788777765443 3456788999999999987543221 112222233 35789999999997
No 34
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.78 E-value=4.6e-20 Score=153.21 Aligned_cols=95 Identities=22% Similarity=0.332 Sum_probs=87.8
Q ss_pred CCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecccccCcccCCCcEEEEccCC
Q 013962 241 PFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP 320 (433)
Q Consensus 241 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~ 320 (433)
++.++||||++...++.+++.| .+..+||+++..+|..+++.|++|+++|||+|+++++|+|+|.+++||++++|
T Consensus 92 ~~~k~lvf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~R~~~l~~F~~~~~~vLv~~~~~~~Gidl~~~~~vi~~~~~ 166 (200)
T d2fwra1 92 RKDKIIIFTRHNELVYRISKVF-----LIPAITHRTSREEREEILEGFRTGRFRAIVSSQVLDEGIDVPDANVGVIMSGS 166 (200)
T ss_dssp SSSCBCCBCSCHHHHHHHHHHT-----TCCBCCSSSCSHHHHTHHHHHHHSSCSBCBCSSCCCSSSCSCCBSEEEEECCS
T ss_pred CCCcEEEEeCcHHHHHHHHhhc-----CcceeeCCCCHHHHHHHHHHhhcCCeeeeeecchhhcccCCCCCCEEEEeCCC
Confidence 4467999999999999998876 35568999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHhhcccCCCCCCce
Q 013962 321 KTVEDYVHRIGRTGRGGSMG 340 (433)
Q Consensus 321 ~s~~~~~Q~~GR~~R~g~~g 340 (433)
+|+..|+|++||++|.|+.+
T Consensus 167 ~s~~~~~Q~iGR~~R~~~~k 186 (200)
T d2fwra1 167 GSAREYIQRLGRILRPSKGK 186 (200)
T ss_dssp SCCHHHHHHHHHSBCCCTTT
T ss_pred CCHHHHHHHHHhcCCCCCCC
Confidence 99999999999999998754
No 35
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.78 E-value=2.5e-19 Score=139.17 Aligned_cols=128 Identities=23% Similarity=0.176 Sum_probs=88.1
Q ss_pred cCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHH
Q 013962 25 SGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 104 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (433)
..+..++.+|||+|||+++...+. . .+.+++|++|++.|++||++.+.+.+... .....++..
T Consensus 7 ~~~~~ll~apTGsGKT~~~~~~~~----~-------~~~~vli~~P~~~l~~q~~~~~~~~~~~~----~~~~~~~~~-- 69 (136)
T d1a1va1 7 SFQVAHLHAPTGSGKSTKVPAAYA----A-------QGYKVLVLNPSVAATLGFGAYMSKAHGVD----PNIRTGVRT-- 69 (136)
T ss_dssp SCEEEEEECCTTSCTTTHHHHHHH----T-------TTCCEEEEESCHHHHHHHHHHHHHHHSCC----CEEECSSCE--
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHH----H-------cCCcEEEEcChHHHHHHHHHHHHHHhhcc----ccccccccc--
Confidence 345689999999999976533222 2 27789999999999999999999887432 223333321
Q ss_pred HHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHHhhCC--CCCcEEEEEeec
Q 013962 105 EQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLP--DKHQTLLFSATM 178 (433)
Q Consensus 105 ~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~--~~~~~i~~SAT~ 178 (433)
......++++|.+.+.... ...+.++++||+||+|++... ....+..++..++ +..+++++||||
T Consensus 70 -----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~vIiDE~H~~~~~-~~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 70 -----ITTGSPITYSTYGKFLADG---GCSGGAYDIIICDECHSTDAT-SILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp -----ECCCCSEEEEEHHHHHHTT---GGGGCCCSEEEEETTTCCSHH-HHHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred -----cccccceEEEeeeeecccc---chhhhcCCEEEEecccccCHH-HHHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 1234578899988765443 345678999999999986432 2233455555543 455789999997
No 36
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.75 E-value=2.3e-19 Score=151.21 Aligned_cols=104 Identities=26% Similarity=0.347 Sum_probs=92.1
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHH----------HHHHHHHhcCCCcEEEEeccccc---CcccC
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDR----------ESALRDFRNGSTNILVATDVASR---GLDVM 309 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r----------~~~~~~f~~g~~~vlv~T~~~~~---Gidip 309 (433)
+++||||+++..|+.+++.|++.++++..+|++++.+.| ...++.|..|+.+++|+|+++.+ |+|++
T Consensus 37 gk~LVFcnSR~~aE~La~~L~~~Gi~a~~~Hgglsq~~R~~~gd~~i~~~~aLe~f~~G~~dvVVaT~~~a~g~~giDid 116 (299)
T d1a1va2 37 GRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTSGDVVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFSLD 116 (299)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCGGGSCSSSSEEEEECTTC---CCCCBSEEEECCEEEEEEEECCCS
T ss_pred CCEEEECCcHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHhccchHHHHHHHHHHHhcCCCcEEEEEeehhccCCCCCCC
Confidence 569999999999999999999999999999999998876 45788999999999999999888 67788
Q ss_pred CCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEec
Q 013962 310 GVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYT 347 (433)
Q Consensus 310 ~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~ 347 (433)
.+.+||+++.|.|..+|+||+||+|| |.+|...++..
T Consensus 117 ~V~~VI~~d~P~SvesyIQRiGRTGR-Gr~G~~~~l~~ 153 (299)
T d1a1va2 117 PTFTIETTTLPQDAVSRTQRRGRTGR-GKPGIYRFVAP 153 (299)
T ss_dssp SSCEEEEEEEECBHHHHHHHHTTBCS-SSCEEEEESCS
T ss_pred cceEEEeCCCCCCHHHHHhhccccCC-CCCceEEEEec
Confidence 88899999999999999999999999 88887766654
No 37
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.71 E-value=1.3e-19 Score=155.70 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=89.8
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEe----cccccCcccCC-CcEEEEc
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVAT----DVASRGLDVMG-VAHVVNL 317 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T----~~~~~Gidip~-~~~Vi~~ 317 (433)
.++||||++++.++.+++.|... +||++++.+|..++++|++|+++||||| +++++|+|+|+ +++||+|
T Consensus 26 ~~~iif~~~~~~~~~l~~~l~~~------~hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~~~v~~rGlDip~~v~~VI~~ 99 (248)
T d1gkub2 26 TGGIIYARTGEEAEEIYESLKNK------FRIGIVTATKKGDYEKFVEGEIDHLIGTAHYYGTLVRGLDLPERIRFAVFV 99 (248)
T ss_dssp SCEEEEESSHHHHHHHHHTTTTS------SCEEECTTSSSHHHHHHHHTSCSEEEEECC------CCSCCTTTCCEEEEE
T ss_pred CCEEEEECCHHHHHHHHHHHHHh------ccCCCCHHHHHHHHHHHHhCCCeEEEEeccccchhhhccCccccccEEEEe
Confidence 45999999999999999999753 7999999999999999999999999999 67999999996 9999999
Q ss_pred cCCCChhHHHhhcccCCCCCCceeEEEEeccccHHHHH
Q 013962 318 DLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDMLLVA 355 (433)
Q Consensus 318 ~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~~~ 355 (433)
|+|+ |.|++||+||.|..|.+++++...+.....
T Consensus 100 d~P~----~~~r~gR~~R~g~~~~~~~~~~~~~~~~~~ 133 (248)
T d1gkub2 100 GCPS----FRVTIEDIDSLSPQMVKLLAYLYRNVDEIE 133 (248)
T ss_dssp SCCE----EEEECSCGGGSCHHHHHHHHTTTSCHHHHH
T ss_pred CCCc----chhhhhhhhccCcceEeeeeccHhhHHHHH
Confidence 9994 889999999999999988888777765544
No 38
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.70 E-value=4.8e-16 Score=137.08 Aligned_cols=161 Identities=18% Similarity=0.205 Sum_probs=107.4
Q ss_pred CCcHHHHHHHHHhh---------cCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 11 RPTSIQAQAMPVAL---------SGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 11 ~~~~~Q~~~i~~~~---------~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
.|+|||.+++..+. .+..+|++..+|.|||++++. ++..+........+...++|||||. +|..||.++
T Consensus 55 ~Lr~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qaia-~l~~l~~~~~~~~~~~~~~LIV~P~-sl~~qW~~E 132 (298)
T d1z3ix2 55 VLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCIT-LIWTLLKQSPDCKPEIDKVIVVSPS-SLVRNWYNE 132 (298)
T ss_dssp TCCHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHHH-HHHHHHHCCTTSSCSCSCEEEEECH-HHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHHH-HHHHHHHhcccccCCCCcEEEEccc-hhhHHHHHH
Confidence 68999999998764 244699999999999987654 4444444433333345679999996 688999999
Q ss_pred HHHHhccCCCceEEEEECCCCHHHHHHH---h-----hCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCC
Q 013962 82 VKALSRSLDSFKTAIVVGGTNIAEQRSE---L-----RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMG 153 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~ 153 (433)
+.+++.. ...+..+.++......... . ....+++++|++.+..... .....++++||+||+|++.+..
T Consensus 133 i~k~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~~~~--~l~~~~~~~vI~DEaH~ikn~~ 208 (298)
T d1z3ix2 133 VGKWLGG--RVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAE--VLHKGKVGLVICDEGHRLKNSD 208 (298)
T ss_dssp HHHHHGG--GCCEEEECSSCHHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHHHTT--TTTTSCCCEEEETTGGGCCTTC
T ss_pred HHhhcCC--ceeEEEEeCchHHHHHHHHHHhhhccCccccceEEEEeecccccchh--cccccceeeeeccccccccccc
Confidence 9999864 3445555555433222211 1 1245799999998865432 2223458899999999997653
Q ss_pred CHHHHHHHHhhCCCCCcEEEEEeecch
Q 013962 154 FEPQIREVMQNLPDKHQTLLFSATMPV 180 (433)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~i~~SAT~~~ 180 (433)
.. ....+..++ ....+++||||..
T Consensus 209 -s~-~~~a~~~l~-~~~rllLTGTPi~ 232 (298)
T d1z3ix2 209 -NQ-TYLALNSMN-AQRRVLISGTPIQ 232 (298)
T ss_dssp -HH-HHHHHHHHC-CSEEEEECSSCSG
T ss_pred -ch-hhhhhhccc-cceeeeecchHHh
Confidence 22 233333343 4557999999953
No 39
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.64 E-value=1.6e-15 Score=134.95 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=98.8
Q ss_pred CCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCc---EEEEecccccCcccCCCcEEEEc
Q 013962 241 PFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTN---ILVATDVASRGLDVMGVAHVVNL 317 (433)
Q Consensus 241 ~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~---vlv~T~~~~~Gidip~~~~Vi~~ 317 (433)
++.++|||++.....+.+.+.|...++.+..++|.++..+|..+++.|+++... +|++|.+++.|+|++.++.||++
T Consensus 117 ~g~KvlIFs~~~~~ld~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLls~~agg~GlnL~~a~~vi~~ 196 (346)
T d1z3ix1 117 TSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMF 196 (346)
T ss_dssp CCCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGGGSCTTCCCTTEEEEEEC
T ss_pred cCCceeEEeehhhhhHHHHHHHhhhhccccccccchhHHHHHHHHHhhhcccccceeeeecchhhhhccccccceEEEEe
Confidence 346799999999999999999999999999999999999999999999987542 56677899999999999999999
Q ss_pred cCCCChhHHHhhcccCCCCCCceeEEEEecccc
Q 013962 318 DLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRD 350 (433)
Q Consensus 318 ~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d 350 (433)
+++|++..+.|++||+.|.|+...|.++.....
T Consensus 197 d~~wnp~~~~Qa~~R~~R~GQ~~~V~v~rli~~ 229 (346)
T d1z3ix1 197 DPDWNPANDEQAMARVWRDGQKKTCYIYRLLST 229 (346)
T ss_dssp SCCSSHHHHHHHHTTSSSTTCCSCEEEEEEEET
T ss_pred cCCCccchHhHhhhcccccCCCCceEEEEEEeC
Confidence 999999999999999999999887776664433
No 40
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.63 E-value=1.4e-15 Score=118.17 Aligned_cols=131 Identities=18% Similarity=0.194 Sum_probs=107.5
Q ss_pred EEEcCchhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcC
Q 013962 212 LEKVSENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNG 291 (433)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g 291 (433)
..+....+|..++...+.+.. ..+.|+||++.|++.++.+++.|.+.++++.++++.....+...+-+..+.|
T Consensus 11 ~vf~T~~eK~~AIi~eV~~~~-------~~grPVLIgT~SIe~SE~ls~~L~~~gi~h~vLnAk~~~~Ea~II~~Ag~~g 83 (175)
T d1tf5a4 11 LIYRTMEGKFKAVAEDVAQRY-------MTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEEAGQKG 83 (175)
T ss_dssp EEESSHHHHHHHHHHHHHHHH-------HHTCCEEEEESCHHHHHHHHHHHHTTTCCCEEECSSCHHHHHHHHTTTTSTT
T ss_pred eEEcCHHHHHHHHHHHHHHHH-------hcCCCEEEEeCcHHHHHHHHHHHHHcCCCceeehhhhHHHHHHHHHhccCCC
Confidence 345567788888888876644 2346699999999999999999999999999999986655555444444444
Q ss_pred CCcEEEEecccccCcccC--------CCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEeccccH
Q 013962 292 STNILVATDVASRGLDVM--------GVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDM 351 (433)
Q Consensus 292 ~~~vlv~T~~~~~Gidip--------~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~ 351 (433)
.|.|||+++++|.|+. +--+||....+.|.....|..||+||+|.+|.+.++++..|.
T Consensus 84 --~VtIATNmAGRGtDikl~~~v~~~GGLhVI~t~~~~s~Rid~Ql~GR~gRQGdpGs~~~~~sleD~ 149 (175)
T d1tf5a4 84 --AVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDE 149 (175)
T ss_dssp --CEEEEETTSSTTCCCCCCTTSGGGTSEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEETTSS
T ss_pred --ceeehhhHHHcCCCccchHHHHhCCCcEEEEeccCcchhHHHHHhcchhhhCCCcccEEEEEcCHH
Confidence 4999999999999994 223899999999999999999999999999999999987774
No 41
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.62 E-value=1.2e-15 Score=130.41 Aligned_cols=123 Identities=15% Similarity=0.167 Sum_probs=90.4
Q ss_pred chhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHC-CCceeeecCCCCHHHHHHHHHHHhcC-CCc
Q 013962 217 ENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAE-GLHAVALHGGRNQSDRESALRDFRNG-STN 294 (433)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~r~~~~~~f~~g-~~~ 294 (433)
...|...+...+.+.. ..+.++||||+.....+.+...|... +..+..+||+++..+|..+++.|+++ ...
T Consensus 67 ~S~K~~~l~~~l~~~~-------~~g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~~ 139 (244)
T d1z5za1 67 RSGKMIRTMEIIEEAL-------DEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVK 139 (244)
T ss_dssp TCHHHHHHHHHHHHHH-------HTTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHHCTTCC
T ss_pred hhhHHHHHHHHHHhhc-------ccccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhccccch
Confidence 3567777777765543 23457999999999999998888654 88899999999999999999999876 467
Q ss_pred EEEEe-cccccCcccCCCcEEEEccCCCChhHHHhhcccCCCCCCceeEEEEe
Q 013962 295 ILVAT-DVASRGLDVMGVAHVVNLDLPKTVEDYVHRIGRTGRGGSMGQATSFY 346 (433)
Q Consensus 295 vlv~T-~~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~GR~~R~g~~g~~~~~~ 346 (433)
+++++ .+.+.|+|++.+++||+++++||+..+.|+.||+.|.|+...+.++.
T Consensus 140 vll~~~~~~g~Glnl~~a~~vi~~~~~wn~~~~~Qa~~R~~R~Gq~~~v~i~~ 192 (244)
T d1z5za1 140 FIVLSVKAGGFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIVHK 192 (244)
T ss_dssp EEEEECCTTCCCCCCTTCSEEEECSCCSCTTTC--------------CCEEEE
T ss_pred hccccccccccccccchhhhhhhcCchhhhHHHhhhcceeeecCCCCceEEEE
Confidence 77655 78999999999999999999999999999999999999876665554
No 42
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.59 E-value=2.5e-15 Score=127.25 Aligned_cols=154 Identities=14% Similarity=0.159 Sum_probs=101.8
Q ss_pred CCCC-CCcHHHHHHHHHhh----cCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 7 HEYT-RPTSIQAQAMPVAL----SGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 7 ~~~~-~~~~~Q~~~i~~~~----~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
.+++ +|+|||.+++..+. .+..+|++.++|.|||++++..+ ..+.... ...++||+|| ..+..||.++
T Consensus 7 ~~~~~~L~~yQ~~~v~~~~~~~~~~~g~iLaDe~GlGKT~~~i~~~-~~~~~~~-----~~~~~LIv~p-~~l~~~W~~e 79 (230)
T d1z63a1 7 YNIKANLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVF-SDAKKEN-----ELTPSLVICP-LSVLKNWEEE 79 (230)
T ss_dssp CSCSSCCCHHHHHHHHHHHHHHHTTCCEEECCCTTSCHHHHHHHHH-HHHHHTT-----CCSSEEEEEC-STTHHHHHHH
T ss_pred hhhhcchhHHHHHHHHHHHHhhhcCCCEEEEeCCCCChHHHHHHhh-hhhhhcc-----cccccceecc-hhhhhHHHHH
Confidence 3444 69999999998764 34569999999999999875444 4443322 2567899999 6788999999
Q ss_pred HHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHH
Q 013962 82 VKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREV 161 (433)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~ 161 (433)
+.++... ..+......... ....+.+|+++|++.+.....- .-..+++||+||+|.+.+... .....
T Consensus 80 ~~~~~~~---~~~~~~~~~~~~-----~~~~~~~vvi~~~~~~~~~~~l---~~~~~~~vI~DEah~~k~~~s--~~~~~ 146 (230)
T d1z63a1 80 LSKFAPH---LRFAVFHEDRSK-----IKLEDYDIILTTYAVLLRDTRL---KEVEWKYIVIDEAQNIKNPQT--KIFKA 146 (230)
T ss_dssp HHHHCTT---SCEEECSSSTTS-----CCGGGSSEEEEEHHHHTTCHHH---HTCCEEEEEEETGGGGSCTTS--HHHHH
T ss_pred HHhhccc---ccceeeccccch-----hhccCcCEEEeeHHHHHhHHHH---hcccceEEEEEhhhcccccch--hhhhh
Confidence 9988643 333332222111 1123468999999987433221 113478999999999987532 22333
Q ss_pred HhhCCCCCcEEEEEeecchH
Q 013962 162 MQNLPDKHQTLLFSATMPVE 181 (433)
Q Consensus 162 ~~~~~~~~~~i~~SAT~~~~ 181 (433)
+..++ ....+++||||..+
T Consensus 147 ~~~l~-a~~r~~LTgTPi~n 165 (230)
T d1z63a1 147 VKELK-SKYRIALTGTPIEN 165 (230)
T ss_dssp HHTSC-EEEEEEECSSCSTT
T ss_pred hhhhc-cceEEEEecchHHh
Confidence 44444 44578999999643
No 43
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.54 E-value=7.4e-14 Score=115.41 Aligned_cols=165 Identities=19% Similarity=0.231 Sum_probs=125.7
Q ss_pred CcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCC
Q 013962 12 PTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDS 91 (433)
Q Consensus 12 ~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~ 91 (433)
++||..+.+..+.-++.-+..+.||-|||+++.+|+....+. |+.|-|++.+..|+..-++++..++..+ +
T Consensus 79 ~RhyDVQLiGgi~L~~G~iaem~TGEGKTL~a~l~a~l~al~--------g~~vhvvTvNdyLA~RDae~m~~iy~~l-G 149 (273)
T d1tf5a3 79 MFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALT--------GKGVHVVTVNEYLASRDAEQMGKIFEFL-G 149 (273)
T ss_dssp CCCCHHHHHHHHHHHTTSEEECCTTSCHHHHHHHHHHHHHTT--------SSCEEEEESSHHHHHHHHHHHHHHHHHT-T
T ss_pred eEEehhHHHHHHHHHhhhheeecCCCcchhHHHHHHHHHHhc--------CCCceEEecCccccchhhhHHhHHHHHc-C
Confidence 444444555555544556999999999999999999988887 8889999999999999999999999987 8
Q ss_pred ceEEEEECCCCHHHHHHHhhCCCcEEEeccHHH-HHHHHcCCC------CCCCccEEEEcccchhc-cCCCHH-------
Q 013962 92 FKTAIVVGGTNIAEQRSELRGGVSIVVATPGRF-LDHLQQGNT------SLSRVSFVILDEADRML-DMGFEP------- 156 (433)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l-~~~~~~~~~------~~~~~~~vIiDE~h~~~-~~~~~~------- 156 (433)
++++++..+....+....+. ++|+++|...| +++++.+.. ..+.+.+.|+||+|.++ +....+
T Consensus 150 lsvg~~~~~~~~~~r~~~Y~--~di~Ygt~~e~~fDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiliDeartpliisg~~ 227 (273)
T d1tf5a3 150 LTVGLNLNSMSKDEKREAYA--ADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQS 227 (273)
T ss_dssp CCEEECCTTSCHHHHHHHHH--SSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHHTTTTTCEEEEEEEE
T ss_pred CCccccccccCHHHHHHHhh--CCceecchhhhhhhhcchhhhcChhhhccCCCCEEEEEcchhhhhhccCCceEeccCc
Confidence 99999998888877766654 79999999988 777776543 24568999999999865 221111
Q ss_pred ------HHHHHHhhCCCCCcEEEEEeecchHHHHHHHHhc
Q 013962 157 ------QIREVMQNLPDKHQTLLFSATMPVEIEALAQEYL 190 (433)
Q Consensus 157 ------~~~~~~~~~~~~~~~i~~SAT~~~~~~~~~~~~~ 190 (433)
.+..+. +-..++.+||+|......++..-|-
T Consensus 228 ~~~a~it~q~~f---~~y~~l~gmtgta~~~~~e~~~iy~ 264 (273)
T d1tf5a3 228 MTLATITFQNYF---RMYEKLAGMTGTAKTEEEEFRNIYN 264 (273)
T ss_dssp EEEEEEEHHHHH---TTSSEEEEEESCCGGGHHHHHHHHC
T ss_pred cchhhhhHHHHH---HHHHHHhCCccccHHHHHHHHhccC
Confidence 122332 3345789999999877777766663
No 44
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.50 E-value=8.9e-14 Score=115.42 Aligned_cols=164 Identities=20% Similarity=0.264 Sum_probs=126.0
Q ss_pred CcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCC
Q 013962 12 PTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDS 91 (433)
Q Consensus 12 ~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~ 91 (433)
++||-.+.+..+.-++.-++.|.||-|||+++.+|+....+. |+.|-|++.+..|+..-++++..++..+ +
T Consensus 96 mRhyDVQLiGgi~l~~g~iaem~TGEGKTL~a~l~a~l~al~--------g~~vhvvTvNdyLA~RDa~~m~~~y~~l-G 166 (288)
T d1nkta3 96 QRPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALA--------GNGVHIVTVNDYLAKRDSEWMGRVHRFL-G 166 (288)
T ss_dssp CCCCHHHHHHHHHHHTTEEEECCTTSCHHHHTHHHHHHHHTT--------TSCEEEEESSHHHHHHHHHHHHHHHHHT-T
T ss_pred ceeeeehhHHHHHHhhhhhhcccCCCchhHHHHHHHHHHHhc--------CCCeEEEecCchhhhhhHHHHHHHHHHh-C
Confidence 444555555556556778999999999999999999988887 8889999999999999999999999987 8
Q ss_pred ceEEEEECCCCHHHHHHHhhCCCcEEEeccHHH-HHHHHcCCC------CCCCccEEEEcccchhc-cCCCHH-------
Q 013962 92 FKTAIVVGGTNIAEQRSELRGGVSIVVATPGRF-LDHLQQGNT------SLSRVSFVILDEADRML-DMGFEP------- 156 (433)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l-~~~~~~~~~------~~~~~~~vIiDE~h~~~-~~~~~~------- 156 (433)
+.++++..+....+....+. ++|+++|...| +++++.+.. ..+.+.++||||+|.++ +....+
T Consensus 167 lsvg~~~~~~~~~~~~~~Y~--~di~Y~t~~e~gfDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiLiDeartpLiis~~~ 244 (288)
T d1nkta3 167 LQVGVILATMTPDERRVAYN--ADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSILIDEARTPLIISNQT 244 (288)
T ss_dssp CCEEECCTTCCHHHHHHHHH--SSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEETTHHHHHTTGGGSCEEEEEEE
T ss_pred CCcCcccccCChHHHHHHhh--cccccccHHHHhhhhhhhhhccChhhhcccCCcEEEEEcccccccccccCceEeccCC
Confidence 99999999998887766654 79999999988 777776542 24568999999999865 211000
Q ss_pred ----HHHHHHhhCCCCCcEEEEEeecchHHHHHHHHh
Q 013962 157 ----QIREVMQNLPDKHQTLLFSATMPVEIEALAQEY 189 (433)
Q Consensus 157 ----~~~~~~~~~~~~~~~i~~SAT~~~~~~~~~~~~ 189 (433)
.+.... +-..++-+||+|......++..-|
T Consensus 245 ~a~it~qn~f---r~y~kl~gmtgta~te~~E~~~iy 278 (288)
T d1nkta3 245 LATITLQNYF---RLYDKLAGMTGTAQTEAAELHEIY 278 (288)
T ss_dssp EEEECHHHHH---TTSSEEEEEESCCGGGHHHHHHHH
T ss_pred cchhhHHHHH---HHHHHHhCCcccHHHHHHHHHHHh
Confidence 112222 234567889999887777776666
No 45
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.50 E-value=2.5e-14 Score=123.36 Aligned_cols=100 Identities=19% Similarity=0.309 Sum_probs=80.3
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecccccCcccCCCcEEEEccCC--
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLDLP-- 320 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~~~-- 320 (433)
++++|||+++.+++.+++.|++.+.++..+||.+...++. .|.+|+.++||||+++++|+|+ ++..||+.+.+
T Consensus 37 g~~~~F~~s~~~~~~~a~~L~~~g~~V~~l~~~~~~~e~~----~~~~~~~~~~~~t~~~~~~~~~-~~~~vid~g~~~~ 111 (299)
T d1yksa2 37 RPTAWFLPSIRAANVMAASLRKAGKSVVVLNRKTFEREYP----TIKQKKPDFILATDIAEMGANL-CVERVLDCRTAFK 111 (299)
T ss_dssp SCEEEECSCHHHHHHHHHHHHHTTCCEEECCSSSCC------------CCCSEEEESSSTTCCTTC-CCSEEEECCEEEE
T ss_pred CCEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCcCcHhHHh----hhhcCCcCEEEEechhhhceec-CceEEEecCceec
Confidence 5699999999999999999999999999999999987765 4678999999999999999999 59999976642
Q ss_pred -----------------CChhHHHhhcccCCCCCCceeEEEEec
Q 013962 321 -----------------KTVEDYVHRIGRTGRGGSMGQATSFYT 347 (433)
Q Consensus 321 -----------------~s~~~~~Q~~GR~~R~g~~g~~~~~~~ 347 (433)
.|..+..||.||+||.+....+++++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~qr~gr~gr~~~~~~~~~~y~ 155 (299)
T d1yksa2 112 PVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPNRDGDSYYYS 155 (299)
T ss_dssp EEEETTTTEEEEEEEEECCHHHHHHHHTTSSCCTTCCCEEEEEC
T ss_pred eeeecCCCCeeEEeeeecCHHHHHHhcccccccCCCceEEEEeC
Confidence 367888999999999865555555554
No 46
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.44 E-value=8.1e-13 Score=104.02 Aligned_cols=134 Identities=19% Similarity=0.204 Sum_probs=111.1
Q ss_pred EEEEcCchhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhc
Q 013962 211 ILEKVSENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 290 (433)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 290 (433)
...+....+|..+++..+.+.. ..+.|+||.+.|++..+.+++.|.+.++++.++++.....+-..+-+.-+.
T Consensus 10 D~Vy~T~~~K~~Avv~ei~~~h-------~~GqPVLVGT~SVe~SE~lS~lL~~~gi~h~vLNAK~herEAeIIAqAG~~ 82 (219)
T d1nkta4 10 DLIYKTEEAKYIAVVDDVAERY-------AKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQEATIIAVAGRR 82 (219)
T ss_dssp CEEESCHHHHHHHHHHHHHHHH-------HTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEECSSCHHHHHHHHHTTTST
T ss_pred CeEEcCHHHHHHHHHHHHHHHH-------hcCCCEEEeeCcHHHHHHHHHHHHHhccchhccchhhHHHHHHHHHhcccC
Confidence 3455677888888888887765 445779999999999999999999999999999997655555555544444
Q ss_pred CCCcEEEEecccccCcccC----------------------------------------------------CCcEEEEcc
Q 013962 291 GSTNILVATDVASRGLDVM----------------------------------------------------GVAHVVNLD 318 (433)
Q Consensus 291 g~~~vlv~T~~~~~Gidip----------------------------------------------------~~~~Vi~~~ 318 (433)
|. |.|||+|+++|.||. +--+||-..
T Consensus 83 Ga--VTIATNMAGRGTDI~LGgn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGL~VIGTE 160 (219)
T d1nkta4 83 GG--VTVATNMAGRGTDIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTE 160 (219)
T ss_dssp TC--EEEEETTCSTTCCCCTTCCHHHHHHHHHHHTTCCTTTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTSEEEEECS
T ss_pred Cc--EEeeccccCCCCceeecCchhhhhHHHhhhcccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecc
Confidence 44 999999999999992 112799999
Q ss_pred CCCChhHHHhhcccCCCCCCceeEEEEeccccHHH
Q 013962 319 LPKTVEDYVHRIGRTGRGGSMGQATSFYTDRDMLL 353 (433)
Q Consensus 319 ~~~s~~~~~Q~~GR~~R~g~~g~~~~~~~~~d~~~ 353 (433)
...|...-.|..||+||+|.+|.+.+|++..|..+
T Consensus 161 rHeSrRIDnQLRGRsGRQGDPGsSrFflSLeDdLm 195 (219)
T d1nkta4 161 RHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELM 195 (219)
T ss_dssp CCSSHHHHHHHHHTSSGGGCCEEEEEEEETTSHHH
T ss_pred ccccccccccccccccccCCCccceeEEeccHHHH
Confidence 99999999999999999999999999999888654
No 47
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=98.61 E-value=1.8e-07 Score=82.78 Aligned_cols=146 Identities=19% Similarity=0.261 Sum_probs=89.3
Q ss_pred CCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhcc
Q 013962 9 YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRS 88 (433)
Q Consensus 9 ~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~ 88 (433)
-....+.|.+|+..++.++-++|.||.|+|||.+. ..++..+.... ...+.++++++||-.-+.++.+.+......
T Consensus 146 ~~~~~~~Q~~A~~~al~~~~~vI~G~pGTGKTt~i-~~~l~~l~~~~---~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~ 221 (359)
T d1w36d1 146 VSDEINWQKVAAAVALTRRISVISGGPGTGKTTTV-AKLLAALIQMA---DGERCRIRLAAPTGKAAARLTESLGKALRQ 221 (359)
T ss_dssp CTTSCCHHHHHHHHHHTBSEEEEECCTTSTHHHHH-HHHHHHHHHTC---SSCCCCEEEEBSSHHHHHHHHHHHTHHHHH
T ss_pred CcccccHHHHHHHHHHcCCeEEEEcCCCCCceehH-HHHHHHHHHHH---hccCCeEEEecCcHHHHHHHHHHHHHHHhh
Confidence 34457789999999999888999999999999874 33333333321 123778999999998888887776554332
Q ss_pred CCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHH------HHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHH
Q 013962 89 LDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFL------DHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVM 162 (433)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~------~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~ 162 (433)
........ .....-..|..++. ..+.........+++|||||+-.+. ...+..++
T Consensus 222 ~~~~~~~~---------------~~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~----~~l~~~ll 282 (359)
T d1w36d1 222 LPLTDEQK---------------KRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMID----LPMMSRLI 282 (359)
T ss_dssp SSCCSCCC---------------CSCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCB----HHHHHHHH
T ss_pred cCchhhhh---------------hhhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhccC----HHHHHHHH
Confidence 21100000 00000011211111 1112223334568999999999753 45677888
Q ss_pred hhCCCCCcEEEEEee
Q 013962 163 QNLPDKHQTLLFSAT 177 (433)
Q Consensus 163 ~~~~~~~~~i~~SAT 177 (433)
..+++..++|++.-.
T Consensus 283 ~~~~~~~~lILvGD~ 297 (359)
T d1w36d1 283 DALPDHARVIFLGDR 297 (359)
T ss_dssp HTCCTTCEEEEEECT
T ss_pred HHhcCCCEEEEECCh
Confidence 888888888776544
No 48
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=98.08 E-value=3.6e-06 Score=73.12 Aligned_cols=70 Identities=21% Similarity=0.116 Sum_probs=53.7
Q ss_pred CCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHh
Q 013962 11 RPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALS 86 (433)
Q Consensus 11 ~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~ 86 (433)
+|+|-|.+|+.. ....++|.|+.|||||.+.+..+...+..... +..+++++++|++++..+...+.+..
T Consensus 1 ~L~~eQ~~av~~--~~~~~lI~g~aGTGKTt~l~~rv~~ll~~~~~----~~~~ILvlt~tn~a~~~i~~~~~~~~ 70 (306)
T d1uaaa1 1 RLNPGQQQAVEF--VTGPCLVLAGAGSGKTRVITNKIAHLIRGCGY----QARHIAAVTFTNKAAREMKERVGQTL 70 (306)
T ss_dssp CCCHHHHHHHHC--CSSEEEECCCTTSCHHHHHHHHHHHHHHHHCC----CGGGEEEEESSHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHhC--CCCCEEEEeeCCccHHHHHHHHHHHHHHhcCC----ChhHEEEEeCcHHHHHHHHHHHHHhc
Confidence 588999999975 34569999999999998876655554433221 24579999999999998888887764
No 49
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.85 E-value=1.2e-05 Score=70.08 Aligned_cols=72 Identities=22% Similarity=0.178 Sum_probs=55.3
Q ss_pred CCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHh
Q 013962 9 YTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALS 86 (433)
Q Consensus 9 ~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~ 86 (433)
...|++-|.+++... ...++|.|+.|||||.+++..+...+.... .+..+++++++++..+..+...+....
T Consensus 9 ~~~L~~eQ~~~v~~~--~g~~lV~g~aGSGKTt~l~~ri~~ll~~~~----~~p~~il~lt~t~~aa~~~~~~~~~~~ 80 (318)
T d1pjra1 9 LAHLNKEQQEAVRTT--EGPLLIMAGAGSGKTRVLTHRIAYLMAEKH----VAPWNILAITFTNKAAREMRERVQSLL 80 (318)
T ss_dssp HTTSCHHHHHHHHCC--SSCEEEEECTTSCHHHHHHHHHHHHHHTTC----CCGGGEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHhCC--CCCEEEEecCCccHHHHHHHHHHHHHHcCC----CCHHHeEeEeccHHHHHHHHHHHHhhc
Confidence 346899999999864 356999999999999987766655554321 123579999999999999888887654
No 50
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.64 E-value=8.5e-05 Score=59.95 Aligned_cols=40 Identities=20% Similarity=0.130 Sum_probs=28.7
Q ss_pred CcHHHHHHHHHhh----cCC---cEEEEcCCCChHHHHHHHHHHHHHh
Q 013962 12 PTSIQAQAMPVAL----SGR---DLLGCAETGSGKTAAFTIPMIQHCV 52 (433)
Q Consensus 12 ~~~~Q~~~i~~~~----~~~---~~l~~~~TGsGKT~~~~~~~~~~~~ 52 (433)
++|||..++..+. +++ .+++.||.|+|||.++. .++..+.
T Consensus 3 ~yPw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~-~~a~~l~ 49 (207)
T d1a5ta2 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIY-ALSRYLL 49 (207)
T ss_dssp CCGGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHH-HHHHHHT
T ss_pred CCcccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHH-HHHHhcc
Confidence 5789988887765 322 38999999999997654 4444444
No 51
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.29 E-value=0.00033 Score=66.87 Aligned_cols=74 Identities=22% Similarity=0.160 Sum_probs=56.7
Q ss_pred CCCCCcHHHHHHHHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhc
Q 013962 8 EYTRPTSIQAQAMPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSR 87 (433)
Q Consensus 8 ~~~~~~~~Q~~~i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~ 87 (433)
-..+|++-|.+++.. ...+++|.|..|||||.+++..+...+.+.. .+..++++|+.|+..++++.+++...++
T Consensus 8 ~~~~L~~eQ~~~v~~--~~~~~lV~A~AGSGKT~~lv~ri~~ll~~~~----~~p~~Il~ltft~~Aa~ei~~Ri~~~l~ 81 (623)
T g1qhh.1 8 LLAHLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKH----VAPWNILAITFTNKAAREMRERVQSLLG 81 (623)
T ss_dssp HHTTSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTTC----CCGGGEEEEESSHHHHHHHHHHHHHHHG
T ss_pred HHHhcCHHHHHHHcC--CCCCEEEEEeCchHHHHHHHHHHHHHHHcCC----CCcccEEEEeccHHHHHHHHHHHHHhcc
Confidence 356899999999973 3467899999999999887766655544421 1245699999999999999998887653
No 52
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.28 E-value=0.0012 Score=52.53 Aligned_cols=131 Identities=18% Similarity=0.233 Sum_probs=69.1
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcC--cHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAP--TRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQ 106 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P--~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (433)
+++.+|||+|||.+..- +..++... +.++.+++. .+.-+. ++++.+.+.+ ++.+.......+....
T Consensus 13 i~lvGp~GvGKTTTiaK-LA~~~~~~-------g~kV~lit~Dt~R~gA~---eQL~~~a~~l-~v~~~~~~~~~~~~~~ 80 (207)
T d1ls1a2 13 WFLVGLQGSGKTTTAAK-LALYYKGK-------GRRPLLVAADTQRPAAR---EQLRLLGEKV-GVPVLEVMDGESPESI 80 (207)
T ss_dssp EEEECCTTTTHHHHHHH-HHHHHHHT-------TCCEEEEECCSSCHHHH---HHHHHHHHHH-TCCEEECCTTCCHHHH
T ss_pred EEEECCCCCCHHHHHHH-HHHHHHHC-------CCcEEEEecccccchHH---HHHHHHHHhc-CCccccccccchhhHH
Confidence 56799999999977544 44444432 455655553 233333 3444444332 3333333333222211
Q ss_pred HHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCC-CHHHHHHHHhhCCCCCcEEEEEeecchHHHHH
Q 013962 107 RSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMG-FEPQIREVMQNLPDKHQTLLFSATMPVEIEAL 185 (433)
Q Consensus 107 ~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~-~~~~~~~~~~~~~~~~~~i~~SAT~~~~~~~~ 185 (433)
.... ... ....+.++|++|=+-+..... ....+..+....++...++.++|+........
T Consensus 81 ~~~~--------------~~~-----~~~~~~d~vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~~~~~ 141 (207)
T d1ls1a2 81 RRRV--------------EEK-----ARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSV 141 (207)
T ss_dssp HHHH--------------HHH-----HHHHTCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHHHHHH
T ss_pred HHHH--------------HHH-----HhhccCcceeecccccchhhhhhHHHHHHHHhhcCCceEEEEeccccchhHHHH
Confidence 1000 000 012346788888887654321 33455556566666666788888888776666
Q ss_pred HHHhc
Q 013962 186 AQEYL 190 (433)
Q Consensus 186 ~~~~~ 190 (433)
+..+.
T Consensus 142 ~~~f~ 146 (207)
T d1ls1a2 142 ARAFD 146 (207)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 53
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=97.21 E-value=0.0008 Score=54.17 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=56.5
Q ss_pred cEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHH
Q 013962 28 DLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 107 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (433)
.+++.||+|+|||... .++...+... +..++++ +...+..+....+..-
T Consensus 38 ~l~l~G~~G~GKTHLl-~A~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~---------------------- 86 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHLL-QAAGNEAKKR-------GYRVIYS-SADDFAQAMVEHLKKG---------------------- 86 (213)
T ss_dssp SEEEECSSSSSHHHHH-HHHHHHHHHT-------TCCEEEE-EHHHHHHHHHHHHHHT----------------------
T ss_pred cEEEECCCCCcHHHHH-HHHHHHhccC-------ccceEEe-chHHHHHHHHHHHHcc----------------------
Confidence 3899999999999753 4444444442 4455554 4455555444443320
Q ss_pred HHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCC-CHHHHHHHHhhCC-CCCcEEEEEeecc
Q 013962 108 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMG-FEPQIREVMQNLP-DKHQTLLFSATMP 179 (433)
Q Consensus 108 ~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~-~~~~~~~~~~~~~-~~~~~i~~SAT~~ 179 (433)
....+...+ ...+++++|++|.+.... ....+..++..+. .+.++|+.|..+|
T Consensus 87 ------------~~~~~~~~~-------~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p 141 (213)
T d1l8qa2 87 ------------TINEFRNMY-------KSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHP 141 (213)
T ss_dssp ------------CHHHHHHHH-------HTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCG
T ss_pred ------------chhhHHHHH-------hhccchhhhhhhhhcCchHHHHHHHHHHHHHhhccceEEEecCCcc
Confidence 111122222 247899999999886432 3334445554443 4455555555444
No 54
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.16 E-value=0.0025 Score=50.63 Aligned_cols=132 Identities=15% Similarity=0.211 Sum_probs=65.5
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 108 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (433)
+++.+|||+|||.+..- +..++... +.++.+++.-..-.. -.++++.+.+.+ ++.+.......+.....
T Consensus 12 i~lvGptGvGKTTTiAK-LA~~~~~~-------g~kV~lit~Dt~R~g-A~eQL~~~a~~l-~v~~~~~~~~~d~~~~l- 80 (211)
T d2qy9a2 12 ILMVGVNGVGKTTTIGK-LARQFEQQ-------GKSVMLAAGDTFRAA-AVEQLQVWGQRN-NIPVIAQHTGADSASVI- 80 (211)
T ss_dssp EEEECCTTSCHHHHHHH-HHHHHHTT-------TCCEEEECCCTTCHH-HHHHHHHHHHHT-TCCEECCSTTCCHHHHH-
T ss_pred EEEECCCCCCHHHHHHH-HHHHHHHC-------CCcEEEEeccccccc-chhhhhhhhhhc-CCcccccccCCCHHHHH-
Confidence 66799999999987544 44444332 445555553221111 234455555443 34443333332221111
Q ss_pred HhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccC-CCHHHHHHHHhhCC------CCCcEEEEEeecchH
Q 013962 109 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDM-GFEPQIREVMQNLP------DKHQTLLFSATMPVE 181 (433)
Q Consensus 109 ~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~-~~~~~~~~~~~~~~------~~~~~i~~SAT~~~~ 181 (433)
.+.... ....++++|+||=+-+.... ..-..+..+....+ +...++.++|+....
T Consensus 81 ----------------~~~~~~--a~~~~~d~ilIDTaGr~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~ 142 (211)
T d2qy9a2 81 ----------------FDAIQA--AKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQN 142 (211)
T ss_dssp ----------------HHHHHH--HHHTTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHH
T ss_pred ----------------HHHHHH--HHHcCCCEEEeccCCCccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcc
Confidence 111110 01235788999988754322 12233444433332 344578889998766
Q ss_pred HHHHHHHh
Q 013962 182 IEALAQEY 189 (433)
Q Consensus 182 ~~~~~~~~ 189 (433)
....+..+
T Consensus 143 ~~~~~~~~ 150 (211)
T d2qy9a2 143 AVSQAKLF 150 (211)
T ss_dssp HHHHHHHH
T ss_pred hHHHHhhh
Confidence 55555444
No 55
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=97.11 E-value=0.00042 Score=61.50 Aligned_cols=65 Identities=29% Similarity=0.373 Sum_probs=48.2
Q ss_pred CcHHHHHHHHHhh----cC-CcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHh
Q 013962 12 PTSIQAQAMPVAL----SG-RDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALS 86 (433)
Q Consensus 12 ~~~~Q~~~i~~~~----~~-~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~ 86 (433)
|+=-|=+|+..+. .| +..+|.|-||||||+++. .++... +..+|||+|+..++.|++++++.++
T Consensus 12 p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA-~l~~~~----------~rp~LVVt~n~~~A~qL~~dL~~~l 80 (413)
T d1t5la1 12 PQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTIS-NVIAQV----------NKPTLVIAHNKTLAGQLYSELKEFF 80 (413)
T ss_dssp CCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHH-HHHHHH----------TCCEEEECSSHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHhcCCCcEEEeCCCCcHHHHHHH-HHHHHh----------CCCEEEEeCCHHHHHHHHHHHHHHc
Confidence 3334666665555 34 468899999999997643 333332 5669999999999999999999987
Q ss_pred c
Q 013962 87 R 87 (433)
Q Consensus 87 ~ 87 (433)
.
T Consensus 81 ~ 81 (413)
T d1t5la1 81 P 81 (413)
T ss_dssp T
T ss_pred C
Confidence 4
No 56
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.07 E-value=0.0024 Score=50.61 Aligned_cols=114 Identities=15% Similarity=0.144 Sum_probs=65.1
Q ss_pred HHHHHHHhhcC---CcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHH--HHHHHHHHHHHhccCC
Q 013962 16 QAQAMPVALSG---RDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTREL--AQQIEKEVKALSRSLD 90 (433)
Q Consensus 16 Q~~~i~~~~~~---~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L--~~q~~~~~~~~~~~~~ 90 (433)
|.+.+..+.+. .++++.||.|+|||..+.. +...+.... ...+-++++.|...- .+|+. .+.++
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~-l~~~i~~~~----~~h~D~~~i~~~~~~I~Id~IR-~i~~~----- 70 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLE-LPEYVEKFP----PKASDVLEIDPEGENIGIDDIR-TIKDF----- 70 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHH-HHHHHHTSC----CCTTTEEEECCSSSCBCHHHHH-HHHHH-----
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHH-HHHHHhccc----cCCCCEEEEeCCcCCCCHHHHH-HHHHH-----
Confidence 66777777643 3699999999999976543 333332211 123446777774211 12211 12221
Q ss_pred CceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHHhhCCCCCc
Q 013962 91 SFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQ 170 (433)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~ 170 (433)
+.. .......+++|+||||.|... ....+.++++.-+++..
T Consensus 71 -------------------------------------~~~-~~~~~~~KviIId~ad~l~~~-aqNaLLK~LEEPp~~t~ 111 (198)
T d2gnoa2 71 -------------------------------------LNY-SPELYTRKYVIVHDCERMTQQ-AANAFLKALEEPPEYAV 111 (198)
T ss_dssp -------------------------------------HTS-CCSSSSSEEEEETTGGGBCHH-HHHHTHHHHHSCCTTEE
T ss_pred -------------------------------------Hhh-CcccCCCEEEEEeCccccchh-hhhHHHHHHhCCCCCce
Confidence 111 122355789999999988643 34455666666566676
Q ss_pred EEEEEeecc
Q 013962 171 TLLFSATMP 179 (433)
Q Consensus 171 ~i~~SAT~~ 179 (433)
++++|..+.
T Consensus 112 fiLit~~~~ 120 (198)
T d2gnoa2 112 IVLNTRRWH 120 (198)
T ss_dssp EEEEESCGG
T ss_pred eeeccCChh
Confidence 776666553
No 57
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.04 E-value=0.00075 Score=55.87 Aligned_cols=88 Identities=16% Similarity=0.161 Sum_probs=66.9
Q ss_pred CeEEEEEeccccHHHHHHHHH----HCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEec-ccccCcccCCCcEEEEc
Q 013962 243 PLTIVFVERKTRCDEVSEALV----AEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATD-VASRGLDVMGVAHVVNL 317 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~----~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~-~~~~Gidip~~~~Vi~~ 317 (433)
.++++.+|+.--+....+.+. ..++.+..+||+++..+|..++....+|+++|+|+|. .+...+.+.++..||.-
T Consensus 133 ~q~~~m~Pt~~La~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~~~~f~~LglviiD 212 (264)
T d1gm5a3 133 FQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIID 212 (264)
T ss_dssp SCEEEECSCHHHHHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCCCEEEEE
T ss_pred cceeEEeehHhhhHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcCCCCccccceeeec
Confidence 459999999888776655554 4478999999999999999999999999999999995 55667888888888876
Q ss_pred cCCCChhHHHhhccc
Q 013962 318 DLPKTVEDYVHRIGR 332 (433)
Q Consensus 318 ~~~~s~~~~~Q~~GR 332 (433)
... .-.|.||.+-
T Consensus 213 EqH--~fgv~Qr~~l 225 (264)
T d1gm5a3 213 EQH--RFGVKQREAL 225 (264)
T ss_dssp SCC--CC-----CCC
T ss_pred ccc--ccchhhHHHH
Confidence 644 2456776543
No 58
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=96.98 E-value=0.0057 Score=49.34 Aligned_cols=109 Identities=9% Similarity=0.046 Sum_probs=80.6
Q ss_pred EEcCchhhHHHHHHHHHHHHHhhhhcCCCCCeEEEEEeccccHHHHHHHHHH----CCCceeeecCCCCHHHHHHHHHHH
Q 013962 213 EKVSENEKVDRLLALLVEEAFLAEKSCHPFPLTIVFVERKTRCDEVSEALVA----EGLHAVALHGGRNQSDRESALRDF 288 (433)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~~r~~~~~~f 288 (433)
.-.....|....+..+.... ..+.++++.+|+.--+....+.+++ .+..+..+|+.++..+|..+++.+
T Consensus 82 ~GdvGsGKT~V~~~a~~~~~-------~~g~qv~~l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~ 154 (233)
T d2eyqa3 82 CGDVGFGKTEVAMRAAFLAV-------DNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEV 154 (233)
T ss_dssp ECCCCTTTHHHHHHHHHHHH-------TTTCEEEEECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHH
T ss_pred EcCCCCCcHHHHHHHHHHHH-------HcCCceEEEccHHHhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHH
Confidence 33344455444444443333 3446699999999999888888875 477899999999999999999999
Q ss_pred hcCCCcEEEEec-ccccCcccCCCcEEEEccCCCChhHHHhhc
Q 013962 289 RNGSTNILVATD-VASRGLDVMGVAHVVNLDLPKTVEDYVHRI 330 (433)
Q Consensus 289 ~~g~~~vlv~T~-~~~~Gidip~~~~Vi~~~~~~s~~~~~Q~~ 330 (433)
.+|+.+|+|.|. .+...+.+++...||.-... .-.|.|+.
T Consensus 155 ~~g~~~iviGths~l~~~~~f~~LgLiIiDEeH--~fg~kQ~~ 195 (233)
T d2eyqa3 155 AEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEH--RFGVRHKE 195 (233)
T ss_dssp HTTCCSEEEECTHHHHSCCCCSSEEEEEEESGG--GSCHHHHH
T ss_pred hCCCCCEEEeehhhhccCCccccccceeeechh--hhhhHHHH
Confidence 999999999996 55567888888888876543 23455543
No 59
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.83 E-value=0.0076 Score=47.69 Aligned_cols=132 Identities=19% Similarity=0.144 Sum_probs=62.2
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEc-Cc-HHHHHHHHHHHHHHhccCCCceEEEEECCCCHH
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLA-PT-RELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA 104 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~-P~-~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (433)
+-+++.+|||+|||.+..- +..++... +.++.+++ .+ |.=+.++.+.+.+.. ++.+.....+.+..
T Consensus 7 ~vi~lvGptGvGKTTTiaK-LA~~~~~~-------g~kV~lit~Dt~R~gA~eQL~~~a~~l----~i~~~~~~~~~d~~ 74 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAK-LGRYYQNL-------GKKVMFCAGDTFRAAGGTQLSEWGKRL----SIPVIQGPEGTDPA 74 (207)
T ss_dssp SEEEEECSTTSSHHHHHHH-HHHHHHTT-------TCCEEEECCCCSSTTHHHHHHHHHHHH----TCCEECCCTTCCHH
T ss_pred EEEEEECCCCCCHHHHHHH-HHHHHHHC-------CCcEEEEEeccccccchhhHhhccccc----CceEEeccCCccHH
Confidence 4468899999999987544 44444332 44555554 32 333333333333322 33332222222221
Q ss_pred HHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCC-CHHHHHHHHhh------CCCCCcEEEEEee
Q 013962 105 EQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMG-FEPQIREVMQN------LPDKHQTLLFSAT 177 (433)
Q Consensus 105 ~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~-~~~~~~~~~~~------~~~~~~~i~~SAT 177 (433)
.... +.... ....+.++|+||=+=+..... .-..+..+... ..+...++.++||
T Consensus 75 ~~~~-----------------~~~~~--~~~~~~d~ilIDTaGr~~~d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~a~ 135 (207)
T d1okkd2 75 ALAY-----------------DAVQA--MKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAV 135 (207)
T ss_dssp HHHH-----------------HHHHH--HHHHTCSEEEECCCCCCTTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETT
T ss_pred HHHH-----------------HHHHH--HHHCCCCEEEcCccccchhhHHHHHHHHHHHHHhhhcccCCCceEEEEeecc
Confidence 1110 10000 011246788888877654321 12223333222 1234457888898
Q ss_pred cchHHHHHHHHh
Q 013962 178 MPVEIEALAQEY 189 (433)
Q Consensus 178 ~~~~~~~~~~~~ 189 (433)
........+..+
T Consensus 136 ~~~~~~~~~~~~ 147 (207)
T d1okkd2 136 TGQNGLEQAKKF 147 (207)
T ss_dssp BCTHHHHHHHHH
T ss_pred cCchHHHHHHHh
Confidence 876655544443
No 60
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=96.76 E-value=0.0021 Score=47.49 Aligned_cols=88 Identities=16% Similarity=0.093 Sum_probs=52.6
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 108 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (433)
-++.||+.||||.- ++-.+..+... +.+++++-|...-.. . .. +....|..
T Consensus 5 ~~i~GpMfsGKTte-Li~~~~~~~~~-------~~kv~~ikp~~D~R~---------~---~~--i~s~~g~~------- 55 (139)
T d2b8ta1 5 EFITGPMFAGKTAE-LIRRLHRLEYA-------DVKYLVFKPKIDTRS---------I---RN--IQSRTGTS------- 55 (139)
T ss_dssp EEEECSTTSCHHHH-HHHHHHHHHHT-------TCCEEEEEECCCGGG---------C---SS--CCCCCCCS-------
T ss_pred EEEEccccCHHHHH-HHHHHHHHHHC-------CCcEEEEEEcccccc---------c---ce--EEcccCce-------
Confidence 47899999999964 44444444432 778999999754211 0 11 11111111
Q ss_pred HhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhc
Q 013962 109 ELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRML 150 (433)
Q Consensus 109 ~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~ 150 (433)
-..+.+.+...+.+.+..... ..+.++|.|||+|-+.
T Consensus 56 ----~~~~~~~~~~~~~~~~~~~~~-~~~~dvI~IDE~QFf~ 92 (139)
T d2b8ta1 56 ----LPSVEVESAPEILNYIMSNSF-NDETKVIGIDEVQFFD 92 (139)
T ss_dssp ----SCCEEESSTHHHHHHHHSTTS-CTTCCEEEECSGGGSC
T ss_pred ----eeeEEeccchhhHHHHHhhcc-ccCcCEEEechhhhcc
Confidence 124556666666666554332 3568999999999653
No 61
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=96.66 E-value=0.0022 Score=50.47 Aligned_cols=91 Identities=16% Similarity=0.206 Sum_probs=71.7
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
+.++.||||...-.+..++.+++.+ ++.++.+++|..+..+....+ .++.+|+|+| ..+.. ..+..+
T Consensus 31 GgQvy~V~p~I~~~e~~~~~l~~~~---p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~T-----tvIEv-GiDvpn 101 (211)
T d2eyqa5 31 GGQVYYLYNDVENIQKAAERLAELV---PEARIAIGHGQMRERELERVMNDFHHQRFNVLVCT-----TIIET-GIDIPT 101 (211)
T ss_dssp TCEEEEECCCSSCHHHHHHHHHHHC---TTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEES-----STTGG-GSCCTT
T ss_pred CCeEEEEEcCccchhhHHHHHHHhC---CceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEe-----hhhhh-ccCCCC
Confidence 9999999999988888888888875 578999999999887766554 4679999999 44333 466788
Q ss_pred ccEEEEcccchhccCCCHHHHHHHHhhC
Q 013962 138 VSFVILDEADRMLDMGFEPQIREVMQNL 165 (433)
Q Consensus 138 ~~~vIiDE~h~~~~~~~~~~~~~~~~~~ 165 (433)
..++||..|+++. ...+..+..+.
T Consensus 102 A~~iiI~~a~rfG----LaQLhQLRGRV 125 (211)
T d2eyqa5 102 ANTIIIERADHFG----LAQLHQLRGRV 125 (211)
T ss_dssp EEEEEETTTTSSC----HHHHHHHHTTC
T ss_pred CcEEEEecchhcc----cccccccccee
Confidence 9999999999874 34566665554
No 62
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.61 E-value=0.0016 Score=52.95 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=26.6
Q ss_pred CCccEEEEcccchhccCCCHHHHHHHHhhCCCCCcEEEEEeecc
Q 013962 136 SRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMP 179 (433)
Q Consensus 136 ~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SAT~~ 179 (433)
....++|+||+|.+... ....+...+...+....+++.+....
T Consensus 100 ~~~kviiiDe~d~~~~~-~~~~ll~~~e~~~~~~~~i~~~~~~~ 142 (224)
T d1sxjb2 100 GKHKIVILDEADSMTAG-AQQALRRTMELYSNSTRFAFACNQSN 142 (224)
T ss_dssp TCCEEEEEESGGGSCHH-HHHTTHHHHHHTTTTEEEEEEESCGG
T ss_pred cceEEEEEecccccchh-HHHHHhhhccccccceeeeeccCchh
Confidence 34679999999988754 23334445555555555666655543
No 63
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.60 E-value=0.0094 Score=47.24 Aligned_cols=54 Identities=17% Similarity=0.302 Sum_probs=32.7
Q ss_pred CCccEEEEcccchhccCC---CHHHHHHHHhhCCCCCcEEEEEeecchHHHHHHHHh
Q 013962 136 SRVSFVILDEADRMLDMG---FEPQIREVMQNLPDKHQTLLFSATMPVEIEALAQEY 189 (433)
Q Consensus 136 ~~~~~vIiDE~h~~~~~~---~~~~~~~~~~~~~~~~~~i~~SAT~~~~~~~~~~~~ 189 (433)
.+.++|+||=+=+..... ....+..+....++...++.++|+...........+
T Consensus 93 ~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~~ 149 (211)
T d1j8yf2 93 EKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLASKF 149 (211)
T ss_dssp TTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHHHHH
T ss_pred cCCceEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEecccCcchHHHHhhh
Confidence 347788888776432211 123455666666666667888999876555544444
No 64
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.54 E-value=0.0028 Score=51.46 Aligned_cols=41 Identities=22% Similarity=0.365 Sum_probs=25.1
Q ss_pred CCCCccEEEEcccchhccCCCHHHHHHHHhhCCCCCcEEEEE
Q 013962 134 SLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFS 175 (433)
Q Consensus 134 ~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~S 175 (433)
......++|+||+|.+... ....+..++...+....+++.+
T Consensus 96 ~~~~~kiiiiDe~d~~~~~-~~~~Ll~~le~~~~~~~~~~~~ 136 (227)
T d1sxjc2 96 FSKGFKLIILDEADAMTNA-AQNALRRVIERYTKNTRFCVLA 136 (227)
T ss_dssp SSCSCEEEEETTGGGSCHH-HHHHHHHHHHHTTTTEEEEEEE
T ss_pred cCCCeEEEEEeccccchhh-HHHHHHHHhhhcccceeecccc
Confidence 3445679999999988654 3444555566555454444433
No 65
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.51 E-value=0.0043 Score=50.52 Aligned_cols=42 Identities=19% Similarity=0.292 Sum_probs=24.0
Q ss_pred CCccEEEEcccchhccCCCHHHHHHHHhhCCCCCcEEEEEeec
Q 013962 136 SRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATM 178 (433)
Q Consensus 136 ~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SAT~ 178 (433)
....++++||+|.+... ....+..++........+++.+..+
T Consensus 108 ~~~~iilide~d~~~~~-~~~~ll~~l~~~~~~~~~i~~~n~~ 149 (231)
T d1iqpa2 108 ASFKIIFLDEADALTQD-AQQALRRTMEMFSSNVRFILSCNYS 149 (231)
T ss_dssp CSCEEEEEETGGGSCHH-HHHHHHHHHHHTTTTEEEEEEESCG
T ss_pred CCceEEeehhhhhcchh-HHHHHhhhcccCCcceEEEeccCCh
Confidence 34678999999987644 2334445555444444444444333
No 66
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.44 E-value=0.0023 Score=46.86 Aligned_cols=37 Identities=14% Similarity=0.092 Sum_probs=26.5
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRE 73 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~ 73 (433)
-++.||+.||||.- ++-.+..+... +..++++-|...
T Consensus 5 ~li~GpMfsGKTt~-Li~~~~~~~~~-------g~~v~~ikp~~D 41 (133)
T d1xbta1 5 QVILGPMFSGKSTE-LMRRVRRFQIA-------QYKCLVIKYAKD 41 (133)
T ss_dssp EEEECCTTSCHHHH-HHHHHHHHHTT-------TCCEEEEEETTC
T ss_pred EEEEecccCHHHHH-HHHHHHHHHHc-------CCcEEEEecccc
Confidence 57899999999964 45555444432 777999998754
No 67
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=96.40 E-value=0.0082 Score=49.07 Aligned_cols=41 Identities=15% Similarity=0.239 Sum_probs=25.1
Q ss_pred CCccEEEEcccchhccCCCHHHHHHHHhhCCCCCcEEEEEee
Q 013962 136 SRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSAT 177 (433)
Q Consensus 136 ~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SAT 177 (433)
....++|+||+|.+... ....+..++...+....+++.|--
T Consensus 114 ~~~kviiIde~d~l~~~-~q~~Llk~lE~~~~~~~~il~tn~ 154 (239)
T d1njfa_ 114 GRFKVYLIDEVHMLSRH-SFNALLKTLEEPPEHVKFLLATTD 154 (239)
T ss_dssp SSSEEEEEETGGGSCHH-HHHHHHHHHHSCCTTEEEEEEESC
T ss_pred CCCEEEEEECcccCCHH-HHHHHHHHHhcCCCCeEEEEEcCC
Confidence 34679999999987533 233455666655555555554433
No 68
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.39 E-value=0.00073 Score=56.12 Aligned_cols=40 Identities=18% Similarity=0.347 Sum_probs=25.8
Q ss_pred CCccEEEEcccchhccCCCHHHHHHHHhhCCCCCcEEEEEe
Q 013962 136 SRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSA 176 (433)
Q Consensus 136 ~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SA 176 (433)
....++|+||+|.+... ....+..++...+....+++.|-
T Consensus 130 ~~~~iiiide~d~l~~~-~~~~l~~~~e~~~~~~~~Il~tn 169 (252)
T d1sxje2 130 HRYKCVIINEANSLTKD-AQAALRRTMEKYSKNIRLIMVCD 169 (252)
T ss_dssp -CCEEEEEECTTSSCHH-HHHHHHHHHHHSTTTEEEEEEES
T ss_pred CCceEEEeccccccccc-cchhhhcccccccccccceeeec
Confidence 34679999999987544 34456666776666665555443
No 69
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=96.36 E-value=0.0052 Score=50.43 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=14.9
Q ss_pred CcEEEEcCCCChHHHHH
Q 013962 27 RDLLGCAETGSGKTAAF 43 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~ 43 (433)
+.+|+.||+|+|||+.+
T Consensus 43 ~giLl~GppGtGKT~la 59 (247)
T d1ixza_ 43 KGVLLVGPPGVGKTHLA 59 (247)
T ss_dssp SEEEEECCTTSSHHHHH
T ss_pred ceEEEecCCCCChhHHH
Confidence 46999999999999865
No 70
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.32 E-value=0.036 Score=43.85 Aligned_cols=131 Identities=18% Similarity=0.171 Sum_probs=61.4
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcH-HHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTR-ELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQR 107 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~-~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (433)
+++.+|||+|||.+.. -+..++..+. .+..++-+.+- .=+. ++++.+...+ ++.+.....+.+.....
T Consensus 14 i~lvGptGvGKTTTiA-KLAa~~~~~~------~kV~lit~Dt~R~gA~---eQL~~~a~~l-~i~~~~~~~~~d~~~~~ 82 (213)
T d1vmaa2 14 IMVVGVNGTGKTTSCG-KLAKMFVDEG------KSVVLAAADTFRAAAI---EQLKIWGERV-GATVISHSEGADPAAVA 82 (213)
T ss_dssp EEEECCTTSSHHHHHH-HHHHHHHHTT------CCEEEEEECTTCHHHH---HHHHHHHHHH-TCEEECCSTTCCHHHHH
T ss_pred EEEECCCCCCHHHHHH-HHHHHHHHCC------CceEEEeecccccchh---HHHHHHhhhc-CccccccCCCCcHHHHH
Confidence 6779999999998754 4444544431 33444444432 3222 3344444332 33333222222221111
Q ss_pred HHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCC-CHHHHHHHHhhCC------CCCcEEEEEeecch
Q 013962 108 SELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMG-FEPQIREVMQNLP------DKHQTLLFSATMPV 180 (433)
Q Consensus 108 ~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~-~~~~~~~~~~~~~------~~~~~i~~SAT~~~ 180 (433)
... ... ....+.++|+||=+-+..... .-..+..+..... +...++.++||...
T Consensus 83 ~~~---------------~~~----~~~~~~d~ilIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~ 143 (213)
T d1vmaa2 83 FDA---------------VAH----ALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQ 143 (213)
T ss_dssp HHH---------------HHH----HHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHH
T ss_pred HHH---------------HHH----HHHcCCCEEEEeccccccchHHHHHHHHHHHhhhhhccccccceeEEeeccccCc
Confidence 000 000 012346788888776543211 2223344443332 23457888888865
Q ss_pred HHHHHHHHh
Q 013962 181 EIEALAQEY 189 (433)
Q Consensus 181 ~~~~~~~~~ 189 (433)
.....+..+
T Consensus 144 ~~~~~~~~~ 152 (213)
T d1vmaa2 144 NGLVQAKIF 152 (213)
T ss_dssp HHHHHHHHH
T ss_pred chhhhhhhh
Confidence 544444433
No 71
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=96.16 E-value=0.007 Score=44.57 Aligned_cols=37 Identities=19% Similarity=0.132 Sum_probs=26.2
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRE 73 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~ 73 (433)
-++.||+.||||.- ++-.+..+... +.+++++-|...
T Consensus 10 ~lI~GpMfSGKTte-Li~~~~~~~~~-------g~~vl~i~~~~D 46 (141)
T d1xx6a1 10 EVIVGPMYSGKSEE-LIRRIRRAKIA-------KQKIQVFKPEID 46 (141)
T ss_dssp EEEECSTTSSHHHH-HHHHHHHHHHT-------TCCEEEEEEC--
T ss_pred EEEEeccccHHHHH-HHHHHHHhhhc-------CCcEEEEEeccc
Confidence 58899999999964 45555444432 778999999754
No 72
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=96.02 E-value=0.025 Score=46.20 Aligned_cols=16 Identities=38% Similarity=0.231 Sum_probs=14.3
Q ss_pred cEEEEcCCCChHHHHH
Q 013962 28 DLLGCAETGSGKTAAF 43 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~ 43 (433)
++|+.||+|+|||..+
T Consensus 42 ~vLL~GppGtGKT~la 57 (246)
T d1d2na_ 42 SVLLEGPPHSGKTALA 57 (246)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 5999999999999765
No 73
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.77 E-value=0.02 Score=46.43 Aligned_cols=42 Identities=24% Similarity=0.319 Sum_probs=25.1
Q ss_pred CccEEEEcccchhccCCCHHHHHHHHhhCCCCCcEEEEEeecc
Q 013962 137 RVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMP 179 (433)
Q Consensus 137 ~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SAT~~ 179 (433)
...++|+||+|.+... ....+..++...+....++..+....
T Consensus 108 ~~~viiiDe~d~l~~~-~~~~l~~~~~~~~~~~~~i~~~~~~~ 149 (237)
T d1sxjd2 108 PYKIIILDEADSMTAD-AQSALRRTMETYSGVTRFCLICNYVT 149 (237)
T ss_dssp SCEEEEETTGGGSCHH-HHHHHHHHHHHTTTTEEEEEEESCGG
T ss_pred CceEEEEecccccCHH-HHHHHhhccccccccccccccccccc
Confidence 4568999999988654 23344455555555555555444443
No 74
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=95.76 E-value=0.02 Score=44.52 Aligned_cols=120 Identities=17% Similarity=0.184 Sum_probs=64.6
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHH------HHHHHHHHHHhccC--CCceEEEE
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA------QQIEKEVKALSRSL--DSFKTAIV 97 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~------~q~~~~~~~~~~~~--~~~~~~~~ 97 (433)
.+|+++.+++|.|||.+. .-+...+....-...-.+.+++-+-+ ..|. .||.++++...... ..-++..+
T Consensus 43 k~n~lLvG~pGVGKTalv-~~LA~ri~~~~vp~~L~~~~i~~ld~-~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILf 120 (195)
T d1jbka_ 43 KNNPVLIGEPGVGKTAIV-EGLAQRIINGEVPEGLKGRRVLALDM-GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF 120 (195)
T ss_dssp SCEEEEECCTTSCHHHHH-HHHHHHHHHTCSCGGGTTCEEEEECH-HHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEE
T ss_pred CCCeEEEecCCcccHHHH-HHHHHHHHhCCCCHHHcCceEEEeeH-HHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 357999999999999764 33444444321111112455555544 4444 46777776655332 11122222
Q ss_pred EC-------------CCCH-HHHHHHhh-CCCcE-EEeccHHHHHHHHcCCCCCCCccEEEEcccc
Q 013962 98 VG-------------GTNI-AEQRSELR-GGVSI-VVATPGRFLDHLQQGNTSLSRVSFVILDEAD 147 (433)
Q Consensus 98 ~~-------------~~~~-~~~~~~~~-~~~~I-vv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h 147 (433)
.. +.+. .-....+. +...+ .-|||+.+..++.......+.|..|-++|-.
T Consensus 121 IDeih~l~~~g~~~g~~d~~~~Lkp~L~rg~l~~IgatT~eey~~~~e~d~aL~rrF~~I~V~Ep~ 186 (195)
T d1jbka_ 121 IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPS 186 (195)
T ss_dssp EETGGGGTT------CCCCHHHHHHHHHTTSCCEEEEECHHHHHHHTTTCHHHHTTEEEEECCCCC
T ss_pred cchHHHHhcCCCCCCcccHHHHHHHHHhCCCceEEecCCHHHHHHHHHcCHHHHhcCCEeecCCCC
Confidence 21 1121 11122222 33444 4478888877766655556778889888864
No 75
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=95.68 E-value=0.024 Score=46.70 Aligned_cols=26 Identities=31% Similarity=0.262 Sum_probs=18.8
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
+|+++.||.|.|||.+. .-+...+..
T Consensus 40 ~n~lLVG~~GvGKTalv-~~la~ri~~ 65 (268)
T d1r6bx2 40 NNPLLVGESGVGKTAIA-EGLAWRIVQ 65 (268)
T ss_dssp CEEEEECCTTSSHHHHH-HHHHHHHHH
T ss_pred CCcEEECCCCCcHHHHH-HHHHHHHHh
Confidence 57999999999999754 334444444
No 76
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=95.58 E-value=0.02 Score=50.52 Aligned_cols=66 Identities=33% Similarity=0.452 Sum_probs=49.0
Q ss_pred CCcHHHHHHHHHhh----cCCc-EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHH
Q 013962 11 RPTSIQAQAMPVAL----SGRD-LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKAL 85 (433)
Q Consensus 11 ~~~~~Q~~~i~~~~----~~~~-~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~ 85 (433)
+|+--|-+|+..+. .+.. ..+.+.+||+||++.. .+.... +..+|||+|+...+.++++.+..+
T Consensus 8 ~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A-~l~~~~----------~rp~LvVt~~~~~A~~l~~dL~~~ 76 (408)
T d1c4oa1 8 SPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMA-KVIEAL----------GRPALVLAPNKILAAQLAAEFREL 76 (408)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHH-HHHHHH----------TCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH-HHHHHh----------CCCEEEEeCCHHHHHHHHHHHHHh
Confidence 55556766776654 4444 6889999999997543 233322 556899999999999999999998
Q ss_pred hc
Q 013962 86 SR 87 (433)
Q Consensus 86 ~~ 87 (433)
+.
T Consensus 77 l~ 78 (408)
T d1c4oa1 77 FP 78 (408)
T ss_dssp CT
T ss_pred cC
Confidence 64
No 77
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.56 E-value=0.0038 Score=53.49 Aligned_cols=52 Identities=21% Similarity=0.368 Sum_probs=33.6
Q ss_pred HHHHHHHHHhh-cCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHH
Q 013962 14 SIQAQAMPVAL-SGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTREL 74 (433)
Q Consensus 14 ~~Q~~~i~~~~-~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L 74 (433)
+.+...+..+. .+++++++|+||||||.. +..++..+. ...+++.+-.+.+|
T Consensus 153 ~~~~~~l~~~v~~~~nili~G~tgSGKTT~-l~al~~~i~--------~~~rivtiEd~~El 205 (323)
T d1g6oa_ 153 EQAISAIKDGIAIGKNVIVCGGTGSGKTTY-IKSIMEFIP--------KEERIISIEDTEEI 205 (323)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESTTSSHHHH-HHHHGGGSC--------TTCCEEEEESSCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccccchHH-HHHHhhhcc--------cccceeeccchhhh
Confidence 33444444333 678999999999999963 444444321 26678888777776
No 78
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=95.46 E-value=0.0098 Score=52.64 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=30.7
Q ss_pred CcHHHHHHHHHhhcCCc--EEEEcCCCChHHHHHHHHHHHHHh
Q 013962 12 PTSIQAQAMPVALSGRD--LLGCAETGSGKTAAFTIPMIQHCV 52 (433)
Q Consensus 12 ~~~~Q~~~i~~~~~~~~--~l~~~~TGsGKT~~~~~~~~~~~~ 52 (433)
+.+.|.+.+..+....+ +|+.||||||||.+ +..++..+.
T Consensus 142 ~~~~~~~~l~~l~~~~~GliLvtGpTGSGKSTT-l~~~l~~~~ 183 (401)
T d1p9ra_ 142 MTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTT-LYAGLQELN 183 (401)
T ss_dssp CCHHHHHHHHHHHTSSSEEEEEECSTTSCHHHH-HHHHHHHHC
T ss_pred ccHHHHHHHHHHHhhhhceEEEEcCCCCCccHH-HHHHhhhhc
Confidence 46889989988886544 88999999999965 455666653
No 79
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.11 E-value=0.073 Score=43.65 Aligned_cols=17 Identities=35% Similarity=0.450 Sum_probs=14.8
Q ss_pred CcEEEEcCCCChHHHHH
Q 013962 27 RDLLGCAETGSGKTAAF 43 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~ 43 (433)
+.+|+.||+|+|||..+
T Consensus 39 ~giLL~GppGtGKT~l~ 55 (258)
T d1e32a2 39 RGILLYGPPGTGKTLIA 55 (258)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred ceeEEecCCCCCchHHH
Confidence 56999999999999753
No 80
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=94.85 E-value=0.17 Score=43.95 Aligned_cols=121 Identities=20% Similarity=0.207 Sum_probs=62.2
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHH-----HHHHHHHHHHhccCC--CceEEEEE
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA-----QQIEKEVKALSRSLD--SFKTAIVV 98 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~-----~q~~~~~~~~~~~~~--~~~~~~~~ 98 (433)
.+|.++.|+.|.|||.+.- -+...+....-...-.+.+++.+-+..-++ .+|.+.++.+..... .-.+.++.
T Consensus 43 k~n~llvG~~GvGKtaiv~-~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfi 121 (387)
T d1qvra2 43 KNNPVLIGEPGVGKTAIVE-GLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFI 121 (387)
T ss_dssp CCCCEEEECTTSCHHHHHH-HHHHHHHHTCSCTTSTTCEEEEECC-----------CHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred CCCCeEECCCCCCHHHHHH-HHHHHHHhCCCCHHHcCceEEEeeHhhhhcccCcchhHHHHHHHHHHHhccCCCceEEEe
Confidence 3579999999999997543 344444443212222356666666655554 256666665543221 11222222
Q ss_pred CCC-------------CHH-HHHHHh-hCCCc-EEEeccHHHHHHHHcCCCCCCCccEEEEcccch
Q 013962 99 GGT-------------NIA-EQRSEL-RGGVS-IVVATPGRFLDHLQQGNTSLSRVSFVILDEADR 148 (433)
Q Consensus 99 ~~~-------------~~~-~~~~~~-~~~~~-Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~ 148 (433)
... +.. .....+ .+..+ |.-|||+.+.. +.......+.|..|-|+|-+.
T Consensus 122 de~h~l~~~g~~~g~~d~a~~Lkp~L~rg~~~~I~~tT~~ey~~-~e~d~al~rrF~~v~v~ep~~ 186 (387)
T d1qvra2 122 DELHTVVGAGKAEGAVDAGNMLKPALARGELRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTV 186 (387)
T ss_dssp CCC-------------------HHHHHTTCCCEEEEECHHHHHH-HTTCTTTCSCCCCEEECCCCH
T ss_pred ccHHHHhcCCCCCCcccHHHHHHHHHhCCCcceeeecCHHHHHH-hcccHHHHHhcccccCCCCcH
Confidence 111 111 111112 23344 45578888854 565555667799999999884
No 81
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=94.58 E-value=0.075 Score=40.30 Aligned_cols=76 Identities=17% Similarity=0.255 Sum_probs=60.2
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
+.++||.|+++.-++.....+... ++.+..++|+.+..+....+ .+..+|+|+| +.+.. ..+..+
T Consensus 31 g~r~lvfc~t~~~~~~l~~~L~~~-----Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT-----~v~~~-GiDip~ 99 (174)
T d1c4oa2 31 GERTLVTVLTVRMAEELTSFLVEH-----GIRARYLHHELDAFKRQALIRDLRLGHYDCLVGI-----NLLRE-GLDIPE 99 (174)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHHT-----TCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEES-----CCCCT-TCCCTT
T ss_pred CCcEEEEEcchhHHHHHHHHHHhc-----CCceEEEecccchHHHHHHHHHHHCCCeEEEEee-----eeeee-eccCCC
Confidence 889999999999999888888873 89999999999877665544 4689999999 44433 466788
Q ss_pred ccEEEEcccch
Q 013962 138 VSFVILDEADR 148 (433)
Q Consensus 138 ~~~vIiDE~h~ 148 (433)
+++||+=.++.
T Consensus 100 V~~Vi~~~~~~ 110 (174)
T d1c4oa2 100 VSLVAILDADK 110 (174)
T ss_dssp EEEEEETTTTS
T ss_pred CcEEEEecccc
Confidence 99999855543
No 82
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.50 E-value=0.023 Score=43.87 Aligned_cols=27 Identities=19% Similarity=0.166 Sum_probs=20.4
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHHHhhc
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQHCVAQ 54 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~~~~~ 54 (433)
++++|.||+|+|||.. +..++..+...
T Consensus 2 k~v~ItG~~GtGKTtl-~~~i~~~l~~~ 28 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTL-IHKASEVLKSS 28 (189)
T ss_dssp CCEEEESCCSSCHHHH-HHHHHHHHHHT
T ss_pred cEEEEECCCCCcHHHH-HHHHHHHHHHC
Confidence 6799999999999974 45556665553
No 83
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=94.16 E-value=0.012 Score=49.98 Aligned_cols=18 Identities=33% Similarity=0.423 Sum_probs=16.0
Q ss_pred CCcEEEEcCCCChHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~ 43 (433)
.+++++.||||+|||..+
T Consensus 49 ~~~iLl~GPpG~GKT~lA 66 (309)
T d1ofha_ 49 PKNILMIGPTGVGKTEIA 66 (309)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred CceEEEECCCCCCHHHHH
Confidence 468999999999999865
No 84
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=93.54 E-value=0.015 Score=51.88 Aligned_cols=18 Identities=33% Similarity=0.423 Sum_probs=15.8
Q ss_pred CCcEEEEcCCCChHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~ 43 (433)
.+|+|+.||||+|||+.+
T Consensus 49 ksNILliGPTGvGKTlLA 66 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIA 66 (443)
T ss_dssp CCCEEEECCTTSSHHHHH
T ss_pred cccEEEECCCCCCHHHHH
Confidence 468999999999999864
No 85
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=93.43 E-value=0.081 Score=39.27 Aligned_cols=135 Identities=15% Similarity=0.102 Sum_probs=70.1
Q ss_pred cEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCC----H
Q 013962 28 DLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN----I 103 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~----~ 103 (433)
-+.|.-..|-|||.+++-.++..+-. |.+|+++-=.+.-... .+. ...... ++.......+.. .
T Consensus 4 ~i~vytG~GKGKTTAAlG~alRA~G~--------G~rV~ivQFlKg~~~~--ge~-~~~~~~-~~~~~~~~~~~~~~~~~ 71 (157)
T d1g5ta_ 4 IIIVFTGNGKGKTTAAFGTAARAVGH--------GKNVGVVQFIKGTWPN--GER-NLLEPH-GVEFQVMATGFTWETQN 71 (157)
T ss_dssp CEEEEESSSSCHHHHHHHHHHHHHHT--------TCCEEEEESSCCSSCC--HHH-HHHGGG-TCEEEECCTTCCCCGGG
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHhcC--------CCEEEEEEEecCCccc--chh-hhhccc-CcEEEEecCCCcccCCC
Confidence 36677888999999888877777655 8888888633311100 011 111111 222221111111 1
Q ss_pred HHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCC--CHHHHHHHHhhCCCCCcEEEEEeecchH
Q 013962 104 AEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMG--FEPQIREVMQNLPDKHQTLLFSATMPVE 181 (433)
Q Consensus 104 ~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~--~~~~~~~~~~~~~~~~~~i~~SAT~~~~ 181 (433)
.+.... .....+..... ...-..+++||+||+-...+.+ ....+..++...|...-+|+..-.+|..
T Consensus 72 ~e~~~~----------~a~~~~~~a~~-~~~~~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~ 140 (157)
T d1g5ta_ 72 READTA----------ACMAVWQHGKR-MLADPLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRD 140 (157)
T ss_dssp HHHHHH----------HHHHHHHHHHH-HTTCTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHH
T ss_pred hHHHHH----------HHHHHHHHHHH-HhhcCccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHH
Confidence 110000 00111222221 1223558999999999888776 4456777777766666555444446655
Q ss_pred HHHH
Q 013962 182 IEAL 185 (433)
Q Consensus 182 ~~~~ 185 (433)
+.+.
T Consensus 141 L~e~ 144 (157)
T d1g5ta_ 141 ILDL 144 (157)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 86
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.15 E-value=0.44 Score=35.49 Aligned_cols=72 Identities=19% Similarity=0.319 Sum_probs=55.5
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
..++||.|.++.-+++.++.+... ++.+..++|+.........+ .++.+|+|+| +.+.+ ..++.+
T Consensus 27 ~~k~iIF~~s~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~r~~~l~~f~~~~~~iLv~T-----dv~~r-GiDi~~ 95 (162)
T d1fuka_ 27 VTQAVIFCNTRRKVEELTTKLRND-----KFTVSAIYSDLPQQERDTIMKEFRSGSSRILIST-----DLLAR-GIDVQQ 95 (162)
T ss_dssp CSCEEEEESSHHHHHHHHHHHHHT-----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEE-----GGGTT-TCCCCS
T ss_pred CCcEEEEEEEEchHHHHHHHHhhc-----CceEEEeccCCchhhHHHHHHHHhhcccceeecc-----ccccc-cccCCC
Confidence 567999999999999998887763 68889999998876665543 3678899999 44433 466778
Q ss_pred ccEEEEc
Q 013962 138 VSFVILD 144 (433)
Q Consensus 138 ~~~vIiD 144 (433)
+++||.=
T Consensus 96 v~~VI~~ 102 (162)
T d1fuka_ 96 VSLVINY 102 (162)
T ss_dssp CSEEEES
T ss_pred ceEEEEe
Confidence 8888863
No 87
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=93.08 E-value=0.06 Score=44.35 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=18.8
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHHHh
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQHCV 52 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~~~ 52 (433)
.++++.||+|+|||.++ -.++..+.
T Consensus 44 ~~lll~GppGtGKT~l~-~~l~~~l~ 68 (276)
T d1fnna2 44 PRATLLGRPGTGKTVTL-RKLWELYK 68 (276)
T ss_dssp CEEEEECCTTSSHHHHH-HHHHHHHT
T ss_pred CceEEECCCCCCHHHHH-HHHHHHHh
Confidence 57999999999999754 44555553
No 88
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=92.90 E-value=0.34 Score=36.94 Aligned_cols=76 Identities=21% Similarity=0.315 Sum_probs=60.5
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
+.+++|.|+++.-++..+..+... ++.+..++|+.+..+....+ .+..+|+|+| +.+.+ ..+..+
T Consensus 31 ~~~~iif~~~~~~~~~~~~~l~~~-----g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaT-----dv~~r-GiDip~ 99 (181)
T d1t5la2 31 NERTLVTTLTKKMAEDLTDYLKEA-----GIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGI-----NLLRE-GLDIPE 99 (181)
T ss_dssp TCEEEEECSSHHHHHHHHHHHHTT-----TCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEES-----CCCSS-SCCCTT
T ss_pred CCeEEEEeehhhhhHHHHHHHHhC-----CcceeEecCCccHHHHHHHHHHHHCCCCCEEEeh-----hHHHc-cCCCCC
Confidence 678999999999988877777753 79999999999877665544 4689999999 44443 567788
Q ss_pred ccEEEEcccch
Q 013962 138 VSFVILDEADR 148 (433)
Q Consensus 138 ~~~vIiDE~h~ 148 (433)
+++||.-++..
T Consensus 100 v~~VI~~d~p~ 110 (181)
T d1t5la2 100 VSLVAILDADK 110 (181)
T ss_dssp EEEEEETTTTS
T ss_pred CCEEEEecCCc
Confidence 99999877764
No 89
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=92.75 E-value=0.059 Score=48.04 Aligned_cols=43 Identities=21% Similarity=0.347 Sum_probs=31.1
Q ss_pred cCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELA 75 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~ 75 (433)
..++++|.|+||+|||.+ +..++..+... +..++|+=|.-++.
T Consensus 49 ~~~H~~I~G~tGsGKT~~-l~~li~~~~~~-------g~~~iiiD~kge~~ 91 (433)
T d1e9ra_ 49 EPRHLLVNGATGTGKSVL-LRELAYTGLLR-------GDRMVIVDPNGDML 91 (433)
T ss_dssp GGGCEEEEECTTSSHHHH-HHHHHHHHHHT-------TCEEEEEEETTHHH
T ss_pred ccceEEEEeCCCCcHHHH-HHHHHHHHHhC-------CCCEEEEeCChhHH
Confidence 346899999999999975 45555555553 66788888876553
No 90
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=92.70 E-value=0.03 Score=48.60 Aligned_cols=17 Identities=41% Similarity=0.446 Sum_probs=15.2
Q ss_pred CcEEEEcCCCChHHHHH
Q 013962 27 RDLLGCAETGSGKTAAF 43 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~ 43 (433)
.++|+.||||.|||.++
T Consensus 69 ~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 69 SNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred cceeeeCCCCccHHHHH
Confidence 57999999999999865
No 91
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=92.44 E-value=0.062 Score=44.59 Aligned_cols=57 Identities=14% Similarity=0.136 Sum_probs=35.6
Q ss_pred HHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHH
Q 013962 20 MPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKA 84 (433)
Q Consensus 20 i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~ 84 (433)
+.-+..|.-+++.|+||+|||..++..+....... +.++++++.--. ..++..++..
T Consensus 29 ~~G~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~-------g~~v~~~s~E~~-~~~~~~r~~~ 85 (277)
T d1cr2a_ 29 TLGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAM-------GKKVGLAMLEES-VEETAEDLIG 85 (277)
T ss_dssp HCSBCTTCEEEEECSTTSSHHHHHHHHHHHHHHTS-------CCCEEEEESSSC-HHHHHHHHHH
T ss_pred hcCCCCCeEEEEEeCCCCCHHHHHHHHHHhhhhhc-------ccceeEeeeccc-hhhHHhHHHH
Confidence 34455667799999999999976555444433332 677888876432 3334444433
No 92
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=92.29 E-value=0.16 Score=45.58 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=42.8
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCC----CCCCceEEEEcCcHHHHHHHHHHHHHHh
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVG----RGDGPLALVLAPTRELAQQIEKEVKALS 86 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~----~~~~~~~lvl~P~~~L~~q~~~~~~~~~ 86 (433)
...+||.|.-|||||.+.+.-++..+....... .-.-..+|+|+=|+.-+.++.+++....
T Consensus 16 ~g~~lv~A~AGsGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Emk~RI~~~L 80 (485)
T d1w36b1 16 QGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNI 80 (485)
T ss_dssp SSCEEEECCTTSCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCchHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHHHHHHHHHH
Confidence 357999999999999988777777765432110 0112458888888888888887775544
No 93
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=92.13 E-value=0.046 Score=41.00 Aligned_cols=19 Identities=21% Similarity=0.335 Sum_probs=15.9
Q ss_pred CCcEEEEcCCCChHHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~ 44 (433)
.+++++.||+|+|||.++-
T Consensus 2 ~k~I~l~G~~GsGKSTvak 20 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIGR 20 (169)
T ss_dssp CCCEEEECCTTSCHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHH
Confidence 4678999999999997653
No 94
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=92.13 E-value=0.075 Score=42.88 Aligned_cols=18 Identities=28% Similarity=0.292 Sum_probs=15.4
Q ss_pred CcEEEEcCCCChHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~ 44 (433)
.++|+.||+|+|||.++-
T Consensus 36 ~~~L~~GPpGtGKT~lA~ 53 (238)
T d1in4a2 36 DHVLLAGPPGLGKTTLAH 53 (238)
T ss_dssp CCEEEESSTTSSHHHHHH
T ss_pred CeEEEECCCCCcHHHHHH
Confidence 479999999999997653
No 95
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=91.94 E-value=0.073 Score=43.03 Aligned_cols=38 Identities=24% Similarity=0.226 Sum_probs=26.4
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCc
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPT 71 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~ 71 (433)
+.-+++.+++|+|||..++..+... ... +..+++++-.
T Consensus 26 gsl~li~G~pGsGKT~l~~qia~~~-~~~-------~~~~~~is~e 63 (242)
T d1tf7a2 26 DSIILATGATGTGKTLLVSRFVENA-CAN-------KERAILFAYE 63 (242)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHH-HTT-------TCCEEEEESS
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHH-HHh-------ccccceeecc
Confidence 3568999999999998665554443 332 6667777653
No 96
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=91.32 E-value=0.11 Score=39.15 Aligned_cols=34 Identities=26% Similarity=0.254 Sum_probs=23.3
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcC
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAP 70 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P 70 (433)
+.+.|+.|||||. .+-.++..+..+ |.++.++..
T Consensus 5 i~itG~~GSGKTT-L~~~L~~~l~~~-------g~~v~v~~~ 38 (170)
T d1np6a_ 5 LAFAAWSGTGKTT-LLKKLIPALCAR-------GIRPGLIKH 38 (170)
T ss_dssp EEEECCTTSCHHH-HHHHHHHHHHHT-------TCCEEEEEE
T ss_pred EEEEcCCCCCHHH-HHHHHHHHHHHC-------CCeEEEecc
Confidence 6789999999995 445566655543 556666554
No 97
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=91.30 E-value=0.82 Score=33.59 Aligned_cols=71 Identities=17% Similarity=0.343 Sum_probs=52.4
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
+.++||.|+++.-+.++++.+... ++.+..+.++....+....+ .+..+|+|+| +.+.. ..++..
T Consensus 28 ~~k~IIF~~s~~~~~~l~~~L~~~-----g~~~~~~~~~~~~~~r~~~~~~f~~~~~~ilv~T-----~~~~~-Gid~~~ 96 (155)
T d1hv8a2 28 EFYGLVFCKTKRDTKELASMLRDI-----GFKAGAIHGDLSQSQREKVIRLFKQKKIRILIAT-----DVMSR-GIDVND 96 (155)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHT-----TCCEEEECSSSCHHHHHHHHHHHHTTSSSEEEEC-----TTHHH-HCCCSC
T ss_pred CCCEEEEECchHHHHHHHhhhccc-----ccccccccccchhhhhhhhhhhhhcccceeeeeh-----hHHhh-hhhhcc
Confidence 557899999999999888888764 67888899988766655443 4578999999 33332 355677
Q ss_pred ccEEEE
Q 013962 138 VSFVIL 143 (433)
Q Consensus 138 ~~~vIi 143 (433)
+++||.
T Consensus 97 v~~Vi~ 102 (155)
T d1hv8a2 97 LNCVIN 102 (155)
T ss_dssp CSEEEE
T ss_pred CcEEEE
Confidence 888874
No 98
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=91.21 E-value=0.091 Score=42.16 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=27.1
Q ss_pred cCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCc
Q 013962 25 SGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPT 71 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~ 71 (433)
.|.-+++.|++|+|||..++..+...+... +..++++..-
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~~-------~~~~~~~s~e 64 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIEF-------DEPGVFVTFE 64 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHHH-------CCCEEEEESS
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhc-------CCCccccccc
Confidence 345689999999999976655455444443 4457777653
No 99
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=91.02 E-value=0.047 Score=40.49 Aligned_cols=16 Identities=31% Similarity=0.277 Sum_probs=13.4
Q ss_pred cEEEEcCCCChHHHHH
Q 013962 28 DLLGCAETGSGKTAAF 43 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~ 43 (433)
-+++.|++|||||..+
T Consensus 4 lIii~G~pGsGKTTla 19 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWA 19 (152)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3688999999999754
No 100
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=90.94 E-value=0.92 Score=35.02 Aligned_cols=71 Identities=18% Similarity=0.244 Sum_probs=53.6
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
+.++||.|+|+.-++.++..+... ++.+..++|+.........+ .+..+|+|+| +.+.. ..++.+
T Consensus 30 ~~~~IIF~~t~~~~~~l~~~l~~~-----~~~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaT-----d~~~~-GiD~p~ 98 (200)
T d1oywa3 30 GKSGIIYCNSRAKVEDTAARLQSK-----GISAAAYHAGLENNVRADVQEKFQRDDLQIVVAT-----VAFGM-GINKPN 98 (200)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHT-----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEC-----TTSCT-TTCCTT
T ss_pred CCCEEEEEeeehhhHHhhhhhccC-----CceeEEecCCCcHHHHHHHHHHHhcccceEEEec-----chhhh-ccCCCC
Confidence 667999999999999888877763 68889999998866555443 4678999999 44333 456677
Q ss_pred ccEEEE
Q 013962 138 VSFVIL 143 (433)
Q Consensus 138 ~~~vIi 143 (433)
+++||.
T Consensus 99 v~~VI~ 104 (200)
T d1oywa3 99 VRFVVH 104 (200)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 888873
No 101
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=90.85 E-value=0.065 Score=43.33 Aligned_cols=18 Identities=33% Similarity=0.322 Sum_probs=15.4
Q ss_pred CcEEEEcCCCChHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~ 44 (433)
.++|+.||+|+|||.++-
T Consensus 36 ~~~Ll~GPpG~GKTtla~ 53 (239)
T d1ixsb2 36 EHLLLFGPPGLGKTTLAH 53 (239)
T ss_dssp CCEEEECCTTSCHHHHHH
T ss_pred CeEEEECCCCCCHHHHHH
Confidence 479999999999997653
No 102
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.52 E-value=1.1 Score=33.44 Aligned_cols=74 Identities=15% Similarity=0.201 Sum_probs=55.1
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
+.++||.|.++.-++.++..+... ++.+..++|+.+..+....+ .+..+|+|+|. .+ ....++.+
T Consensus 32 ~~k~iVF~~~~~~~~~l~~~L~~~-----g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td-----~~-~~Gid~~~ 100 (171)
T d1s2ma2 32 INQAIIFCNSTNRVELLAKKITDL-----GYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSD-----LL-TRGIDIQA 100 (171)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHH-----TCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESS-----CS-SSSCCCTT
T ss_pred CCceEEEEeeeehhhHhHHhhhcc-----cccccccccccchhhhhhhhhhcccCccccccchh-----Hh-hhccccce
Confidence 678999999999999888888775 68888899998866555443 46789999993 22 23466777
Q ss_pred ccEEEEccc
Q 013962 138 VSFVILDEA 146 (433)
Q Consensus 138 ~~~vIiDE~ 146 (433)
+++||.=+.
T Consensus 101 v~~VI~~d~ 109 (171)
T d1s2ma2 101 VNVVINFDF 109 (171)
T ss_dssp EEEEEESSC
T ss_pred eEEEEecCC
Confidence 888885433
No 103
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=90.47 E-value=0.15 Score=41.60 Aligned_cols=18 Identities=28% Similarity=0.390 Sum_probs=15.4
Q ss_pred CcEEEEcCCCChHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~ 44 (433)
+.+++.||+|+|||+++-
T Consensus 46 ~~iLL~GppGtGKT~la~ 63 (256)
T d1lv7a_ 46 KGVLMVGPPGTGKTLLAK 63 (256)
T ss_dssp CEEEEECCTTSCHHHHHH
T ss_pred CeEEeeCCCCCCccHHHH
Confidence 569999999999998653
No 104
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=90.26 E-value=0.14 Score=38.62 Aligned_cols=18 Identities=28% Similarity=0.296 Sum_probs=15.1
Q ss_pred CcEEEEcCCCChHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~ 44 (433)
.++++.||+|||||.++-
T Consensus 5 ~~I~i~G~pGsGKTTia~ 22 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGK 22 (173)
T ss_dssp CCEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 468899999999997653
No 105
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=90.01 E-value=0.062 Score=40.68 Aligned_cols=16 Identities=19% Similarity=0.245 Sum_probs=13.7
Q ss_pred cEEEEcCCCChHHHHH
Q 013962 28 DLLGCAETGSGKTAAF 43 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~ 43 (433)
-+++.||+|||||.++
T Consensus 4 lI~i~G~~GsGKTTva 19 (176)
T d2bdta1 4 LYIITGPAGVGKSTTC 19 (176)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999999764
No 106
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=89.79 E-value=0.092 Score=43.21 Aligned_cols=16 Identities=38% Similarity=0.405 Sum_probs=14.0
Q ss_pred cEEEEcCCCChHHHHH
Q 013962 28 DLLGCAETGSGKTAAF 43 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~ 43 (433)
.+++.||+|+|||..+
T Consensus 34 ~ilL~GpPGtGKT~la 49 (273)
T d1gvnb_ 34 AFLLGGQPGSGKTSLR 49 (273)
T ss_dssp EEEEECCTTSCTHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4899999999999764
No 107
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.72 E-value=0.15 Score=41.40 Aligned_cols=23 Identities=30% Similarity=0.268 Sum_probs=17.0
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQH 50 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~ 50 (433)
..+++.||+|+|||.++ ..+...
T Consensus 53 ~~lll~GPpG~GKTt~a-~~la~~ 75 (253)
T d1sxja2 53 RAAMLYGPPGIGKTTAA-HLVAQE 75 (253)
T ss_dssp SEEEEECSTTSSHHHHH-HHHHHH
T ss_pred ceEEEECCCCCCHHHHH-HHHHHH
Confidence 45999999999999754 334443
No 108
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=89.72 E-value=0.072 Score=40.46 Aligned_cols=19 Identities=37% Similarity=0.454 Sum_probs=15.4
Q ss_pred cCCcEEEEcCCCChHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~ 43 (433)
.|+-+++.||+|||||.++
T Consensus 3 ~g~iI~l~G~~GsGKSTia 21 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIA 21 (176)
T ss_dssp TTEEEEEEECTTSCHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH
Confidence 3556889999999999754
No 109
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=89.59 E-value=0.38 Score=39.27 Aligned_cols=18 Identities=17% Similarity=0.082 Sum_probs=15.0
Q ss_pred CCcEEEEcCCCChHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~ 43 (433)
++.++|.||.|+|||..+
T Consensus 29 ~~~i~i~G~~G~GKTsLl 46 (283)
T d2fnaa2 29 APITLVLGLRRTGKSSII 46 (283)
T ss_dssp SSEEEEEESTTSSHHHHH
T ss_pred CCEEEEEcCCCCcHHHHH
Confidence 456889999999999653
No 110
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=89.42 E-value=0.081 Score=40.09 Aligned_cols=17 Identities=29% Similarity=0.405 Sum_probs=14.6
Q ss_pred CcEEEEcCCCChHHHHH
Q 013962 27 RDLLGCAETGSGKTAAF 43 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~ 43 (433)
.++++.||+|+|||.++
T Consensus 6 ~~I~i~G~~GsGKTT~~ 22 (174)
T d1y63a_ 6 INILITGTPGTGKTSMA 22 (174)
T ss_dssp CEEEEECSTTSSHHHHH
T ss_pred CEEEEEeCCCCCHHHHH
Confidence 46899999999999754
No 111
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=89.05 E-value=0.14 Score=39.17 Aligned_cols=17 Identities=18% Similarity=0.194 Sum_probs=14.7
Q ss_pred CcEEEEcCCCChHHHHH
Q 013962 27 RDLLGCAETGSGKTAAF 43 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~ 43 (433)
+.+++.||+|+|||..+
T Consensus 8 K~I~i~G~~GsGKTTla 24 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLV 24 (192)
T ss_dssp EEEEEECCTTSHHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 56999999999999753
No 112
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=88.71 E-value=0.68 Score=36.08 Aligned_cols=74 Identities=18% Similarity=0.209 Sum_probs=53.3
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHC----CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEec-----cc-ccCcccC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAE----GLHAVALHGGRNQSDRESALRDFRNGSTNILVATD-----VA-SRGLDVM 309 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~-----~~-~~Gidip 309 (433)
..+.+++|.|++++.+..+.+.+... +..+...+|+.+..+....++ ..+|+|+|+ .+ ...+++.
T Consensus 70 ~~~~~~lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l~-----~~~IlV~TP~~l~~~l~~~~~~~~ 144 (208)
T d1hv8a1 70 NNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALK-----NANIVVGTPGRILDHINRGTLNLK 144 (208)
T ss_dssp SSSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHHH-----TCSEEEECHHHHHHHHHTTCSCTT
T ss_pred ccCcceEEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhcC-----CCCEEEEChHHHHHHHHcCCCCcc
Confidence 45567999999999999887777654 567888888877766554442 367999994 22 3456778
Q ss_pred CCcEEEEcc
Q 013962 310 GVAHVVNLD 318 (433)
Q Consensus 310 ~~~~Vi~~~ 318 (433)
++.++|.-+
T Consensus 145 ~l~~lViDE 153 (208)
T d1hv8a1 145 NVKYFILDE 153 (208)
T ss_dssp SCCEEEEET
T ss_pred cCcEEEEEC
Confidence 888877643
No 113
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=88.68 E-value=0.19 Score=38.35 Aligned_cols=25 Identities=12% Similarity=0.112 Sum_probs=17.3
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHHHh
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQHCV 52 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~~~ 52 (433)
+-+++.|++|||||... -.+...+.
T Consensus 2 kiI~i~G~~GsGKsT~~-~~L~~~l~ 26 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSS-QLAMDNLR 26 (190)
T ss_dssp CEEEEECCTTSCHHHHH-HHHHHHHH
T ss_pred CEEEEECCCCCCHHHHH-HHHHHHHH
Confidence 45789999999999643 33444443
No 114
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=88.51 E-value=0.1 Score=39.49 Aligned_cols=18 Identities=17% Similarity=0.257 Sum_probs=14.8
Q ss_pred CCcEEEEcCCCChHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~ 43 (433)
.+-+++.|++|||||.++
T Consensus 3 ~kiI~l~G~~GsGKsTva 20 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIV 20 (178)
T ss_dssp CCEEEEECCTTSSHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 455788999999999754
No 115
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.40 E-value=3.4 Score=30.57 Aligned_cols=94 Identities=15% Similarity=0.224 Sum_probs=65.9
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRS 108 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (433)
..+..+....|.. ++..++... .+.++||.|.++.-++..+..+... ++.+..++|+........
T Consensus 11 ~~v~v~~~~~K~~-~L~~ll~~~---------~~~k~iiF~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~r~~ 75 (168)
T d2j0sa2 11 FFVAVEREEWKFD-TLCDLYDTL---------TITQAVIFCNTKRKVDWLTEKMREA-----NFTVSSMHGDMPQKERES 75 (168)
T ss_dssp EEEEESSTTHHHH-HHHHHHHHH---------TSSEEEEECSSHHHHHHHHHHHHHT-----TCCCEEECTTSCHHHHHH
T ss_pred EEEEecChHHHHH-HHHHHHHhC---------CCCceEEEeeeHHHHHHHHHHhhhc-----ccchhhhhhhhhHHHHHH
Confidence 3455555567764 344444432 2678999999999999888877764 677888899988766554
Q ss_pred Hh----hCCCcEEEeccHHHHHHHHcCCCCCCCccEEEE
Q 013962 109 EL----RGGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 143 (433)
Q Consensus 109 ~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIi 143 (433)
.+ .+..+|+|+| +.+.+ ..++.++++||.
T Consensus 76 ~~~~fk~g~~~iLv~T-----d~~~r-GiDi~~v~~VIn 108 (168)
T d2j0sa2 76 IMKEFRSGASRVLIST-----DVWAR-GLDVPQVSLIIN 108 (168)
T ss_dssp HHHHHHHTSSCEEEEC-----GGGSS-SCCCTTEEEEEE
T ss_pred HHHHHhcCCccEEecc-----chhcc-cccccCcceEEE
Confidence 43 4678999999 54443 566777888874
No 116
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=88.37 E-value=0.18 Score=39.77 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=22.5
Q ss_pred CcEEEEcC-CCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEc
Q 013962 27 RDLLGCAE-TGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLA 69 (433)
Q Consensus 27 ~~~l~~~~-TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~ 69 (433)
+.++|.+- ||.|||.+.+. +...+.+. |.+|+++=
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~-La~aLa~~-------G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCA-LLQAAKAA-------GYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHH-HHHHHHHT-------TCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHH-HHHHHHHC-------CCeEEEEC
Confidence 35666666 79999987543 33333332 77888873
No 117
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=88.22 E-value=0.39 Score=39.82 Aligned_cols=69 Identities=16% Similarity=0.123 Sum_probs=46.7
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEE
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFV 141 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~v 141 (433)
.++++|.||+..-+++++..+++. +..+..++|.....+......+..+|+|+| +..... ..+ ++.+|
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~~~-----g~~V~~l~~~~~~~e~~~~~~~~~~~~~~t-----~~~~~~-~~~-~~~~v 103 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLRKA-----GKSVVVLNRKTFEREYPTIKQKKPDFILAT-----DIAEMG-ANL-CVERV 103 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHT-----TCCEEECCSSSCC--------CCCSEEEES-----SSTTCC-TTC-CCSEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhc-----CCeEEEEcCcCcHhHHhhhhcCCcCEEEEe-----chhhhc-eec-CceEE
Confidence 667999999999999999988874 577888888887777666666778999999 544432 334 36665
Q ss_pred E
Q 013962 142 I 142 (433)
Q Consensus 142 I 142 (433)
|
T Consensus 104 i 104 (299)
T d1yksa2 104 L 104 (299)
T ss_dssp E
T ss_pred E
Confidence 4
No 118
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=88.01 E-value=0.37 Score=41.32 Aligned_cols=24 Identities=25% Similarity=0.170 Sum_probs=17.8
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQH 50 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~~ 50 (433)
++.+++.||+|+|||..+ ..++..
T Consensus 154 ~~~~~~~g~~~~gk~~~~-~~~~~~ 177 (362)
T d1svma_ 154 KRYWLFKGPIDSGKTTLA-AALLEL 177 (362)
T ss_dssp CCEEEEECSTTSSHHHHH-HHHHHH
T ss_pred cCeEEEECCCCCCHHHHH-HHHHHH
Confidence 356999999999999765 444444
No 119
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.94 E-value=0.17 Score=42.90 Aligned_cols=24 Identities=29% Similarity=0.490 Sum_probs=18.7
Q ss_pred HHHhhcCCc--EEEEcCCCChHHHHH
Q 013962 20 MPVALSGRD--LLGCAETGSGKTAAF 43 (433)
Q Consensus 20 i~~~~~~~~--~l~~~~TGsGKT~~~ 43 (433)
+..+++|.+ ++..|+||||||.+.
T Consensus 68 v~~~l~G~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 68 VKDVLEGYNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHcCCCcceeeecccCCCCceec
Confidence 344556765 788999999999875
No 120
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=87.74 E-value=0.19 Score=41.01 Aligned_cols=53 Identities=19% Similarity=0.167 Sum_probs=35.2
Q ss_pred HHHHhhc-C-----CcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHH
Q 013962 19 AMPVALS-G-----RDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIE 79 (433)
Q Consensus 19 ~i~~~~~-~-----~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~ 79 (433)
+++.++. | +-+.+.+|+|+|||..++..+...... +..++|+-.-..+..+++
T Consensus 41 ~lD~~Lg~GGi~~g~itei~G~~gsGKTtl~l~~~~~~q~~--------g~~~vyidtE~~~~~~~a 99 (263)
T d1u94a1 41 SLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQRE--------GKTCAFIDAEHALDPIYA 99 (263)
T ss_dssp HHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHHHHHHT--------TCCEEEEESSCCCCHHHH
T ss_pred HHHHHhcCCCccCceEEEEecCCCcHHHHHHHHHHHHHHcC--------CCEEEEEccccccCHHHH
Confidence 5555663 3 458999999999998766555554322 667788776656555443
No 121
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=87.74 E-value=0.26 Score=35.63 Aligned_cols=66 Identities=23% Similarity=0.341 Sum_probs=49.1
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEE
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFV 141 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~v 141 (433)
+.++||.|+++.-++++++.+... ++.+..++++...... ..+..+|+|+| +.+... .+ .++++|
T Consensus 35 ~~k~IVFc~t~~~ae~la~~L~~~-----G~~~~~~H~~~~~~~~---~~~~~~vlvaT-----d~~~~G-iD-~~v~~V 99 (138)
T d1jr6a_ 35 GGRHLIFCHSKKKCDELAAKLVAL-----GINAVAYYRGLDVSVI---PTNGDVVVVAT-----DALMTG-FT-GDFDSV 99 (138)
T ss_dssp TSCEEEECSCHHHHHHHHHHHHHH-----TCEEEEECTTCCSCCC---TTSSCEEEEES-----SSSCSS-SC-CCBSEE
T ss_pred CCCEEEEeCcHHHHHHHHHHHhcc-----ccchhhhhccchhhhh---hhhhcceeehh-----HHHHhc-cc-cccceE
Confidence 667999999999999999988875 6888888888764332 34668899999 554443 33 457777
Q ss_pred E
Q 013962 142 I 142 (433)
Q Consensus 142 I 142 (433)
|
T Consensus 100 i 100 (138)
T d1jr6a_ 100 I 100 (138)
T ss_dssp E
T ss_pred E
Confidence 5
No 122
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=87.53 E-value=0.32 Score=36.34 Aligned_cols=33 Identities=18% Similarity=0.070 Sum_probs=22.3
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEc
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLA 69 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~ 69 (433)
+-|.|+.|||||. .+..++..+... |.++-++-
T Consensus 4 i~I~G~~gSGKTT-li~~l~~~L~~~-------g~~v~vik 36 (165)
T d1xjca_ 4 WQVVGYKHSGKTT-LMEKWVAAAVRE-------GWRVGTVK 36 (165)
T ss_dssp EEEECCTTSSHHH-HHHHHHHHHHHT-------TCCEEEEE
T ss_pred EEEEeCCCCCHHH-HHHHHHHHHHhC-------CCeEEEEE
Confidence 3589999999995 455566666553 55565554
No 123
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=87.31 E-value=0.19 Score=38.14 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=23.7
Q ss_pred CCccEEEEcccchhccCCCHHHHHHHHhhCCCCCcEEEEEee
Q 013962 136 SRVSFVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSAT 177 (433)
Q Consensus 136 ~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SAT 177 (433)
...+++++||++..... .......+...+......++++..
T Consensus 98 ~~~~vlllDE~~~~~~~-~~~~~~~l~~~l~~~~~~il~~~h 138 (178)
T d1ye8a1 98 DRRKVIIIDEIGKMELF-SKKFRDLVRQIMHDPNVNVVATIP 138 (178)
T ss_dssp CTTCEEEECCCSTTGGG-CHHHHHHHHHHHTCTTSEEEEECC
T ss_pred cCCCceeecCCCccchh-hHHHHHHHHHHhccCCCEEEEEEc
Confidence 45789999998765443 234444555555544445555443
No 124
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=87.18 E-value=0.23 Score=34.82 Aligned_cols=64 Identities=11% Similarity=0.040 Sum_probs=50.7
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecccccCcccCCCcEEEEcc
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVASRGLDVMGVAHVVNLD 318 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~~~~Gidip~~~~Vi~~~ 318 (433)
.++|+.|.+....+.+.+.|...++.+..+.+. ..|.++. +.|+...+..|+-+|..+.+|..+
T Consensus 35 ~~Vli~a~s~g~~erl~e~L~~~~i~~~~~~~~----------~~~~~~~--~~i~~~~l~~GF~~~~~~l~vItE 98 (117)
T d2eyqa2 35 GPVVFSVESEGRREALGELLARIKIAPQRIMRL----------DEASDRG--RYLMIGAAEHGFVDTVRNLALICE 98 (117)
T ss_dssp SCCCEEESSHHHHHHHHHHHGGGTCCCEECSSG----------GGCCTTC--CEEEECCCCSCEEETTTTEEEEEH
T ss_pred CeEEEEECCccHHHHHHHHHHHcCCCceEecCh----------hhhcCce--EEEEEecCccccccCCCCEEEEEc
Confidence 458999999999999999999999987666542 1233344 667778899999999999988765
No 125
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.14 E-value=0.17 Score=39.97 Aligned_cols=23 Identities=22% Similarity=0.094 Sum_probs=17.6
Q ss_pred CCcEEEEcCCCChHHHHHHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMI 48 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~ 48 (433)
|+-+++.||+|+|||..++..+.
T Consensus 23 G~v~~i~G~~GsGKT~l~l~la~ 45 (242)
T d1n0wa_ 23 GSITEMFGEFRTGKTQICHTLAV 45 (242)
T ss_dssp TSEEEEECCTTSSHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCHHHHHHHHHH
Confidence 45699999999999976554443
No 126
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=87.12 E-value=0.19 Score=37.59 Aligned_cols=17 Identities=24% Similarity=0.323 Sum_probs=14.5
Q ss_pred CcEEEEcCCCChHHHHH
Q 013962 27 RDLLGCAETGSGKTAAF 43 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~ 43 (433)
+++++.|++|+|||.++
T Consensus 1 k~I~liG~~GsGKsTi~ 17 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLA 17 (161)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 46889999999999764
No 127
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=87.00 E-value=0.2 Score=40.55 Aligned_cols=24 Identities=25% Similarity=0.057 Sum_probs=18.0
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQ 49 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~ 49 (433)
|.-++|.+|+|+|||..++..+..
T Consensus 36 G~~~li~G~pGsGKT~~~lq~~~~ 59 (254)
T d1pzna2 36 QAITEVFGEFGSGKTQLAHTLAVM 59 (254)
T ss_dssp SEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHH
Confidence 346999999999999765544443
No 128
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.95 E-value=0.23 Score=40.64 Aligned_cols=18 Identities=28% Similarity=0.329 Sum_probs=15.3
Q ss_pred CCcEEEEcCCCChHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~ 43 (433)
.+.+|+.||+|+|||..+
T Consensus 41 ~~giLL~Gp~GtGKT~l~ 58 (265)
T d1r7ra3 41 SKGVLFYGPPGCGKTLLA 58 (265)
T ss_dssp CCEEEEBCCTTSSHHHHH
T ss_pred CCeEEEECCCCCcchhHH
Confidence 356999999999999754
No 129
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=86.84 E-value=0.19 Score=43.29 Aligned_cols=24 Identities=29% Similarity=0.472 Sum_probs=17.8
Q ss_pred HHhhcCCc--EEEEcCCCChHHHHHH
Q 013962 21 PVALSGRD--LLGCAETGSGKTAAFT 44 (433)
Q Consensus 21 ~~~~~~~~--~l~~~~TGsGKT~~~~ 44 (433)
..+++|.+ ++..|+||||||.+..
T Consensus 107 ~~~l~G~n~tifaYGqTGSGKTyTm~ 132 (362)
T d1v8ka_ 107 QTIFEGGKATCFAYGQTGSGKTHTMG 132 (362)
T ss_dssp HHHHTTCEEEEEEEESTTSSHHHHHH
T ss_pred HHHHhccCceEEeeccCCCCCceeee
Confidence 34456665 6778999999999854
No 130
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.68 E-value=2 Score=31.91 Aligned_cols=71 Identities=17% Similarity=0.292 Sum_probs=52.8
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
..++||.|.++.-+..++..+.. .++.+..++|+....+....+ .+..+++|+| +.+. ...++.+
T Consensus 32 ~~~~lIF~~~~~~~~~l~~~l~~-----~~~~~~~~hg~~~~~~R~~~~~~F~~g~~~ilv~T-----d~~~-~Gid~~~ 100 (168)
T d2rb4a1 32 IGQAIIFCQTRRNAKWLTVEMIQ-----DGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITT-----NVCA-RGIDVKQ 100 (168)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHT-----TTCCEEEECSSCCHHHHHHHHHHHHTTSCSEEEEC-----CSCC-TTTCCTT
T ss_pred CCcEEEEcCHHHHHHHHHHHHHh-----cCCcceecccchhhHHHHHHhhhhcCCceeeeech-----hhhh-hhhcccc
Confidence 67899999999998888776665 378899999999877655443 4678999999 3322 2455677
Q ss_pred ccEEEE
Q 013962 138 VSFVIL 143 (433)
Q Consensus 138 ~~~vIi 143 (433)
+.+||.
T Consensus 101 v~~Vi~ 106 (168)
T d2rb4a1 101 VTIVVN 106 (168)
T ss_dssp EEEEEE
T ss_pred ccEEEe
Confidence 777775
No 131
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=86.56 E-value=0.14 Score=38.54 Aligned_cols=17 Identities=29% Similarity=0.288 Sum_probs=14.0
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
-+++.|++|||||.++-
T Consensus 8 iivl~G~~GsGKsT~a~ 24 (171)
T d1knqa_ 8 IYVLMGVSGSGKSAVAS 24 (171)
T ss_dssp EEEEECSTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37889999999997653
No 132
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=86.50 E-value=0.15 Score=38.67 Aligned_cols=26 Identities=19% Similarity=0.103 Sum_probs=18.0
Q ss_pred cCCcEEEEcCCCChHHHHHHHHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
.|..+++.|++|||||.++ -.+...+
T Consensus 5 ~g~~I~l~G~~GsGKTTia-~~La~~L 30 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIA-RALQVTL 30 (183)
T ss_dssp CCEEEEEECSTTSSHHHHH-HHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHH-HHHHHHH
Confidence 3455788999999999765 3333343
No 133
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.40 E-value=0.16 Score=40.93 Aligned_cols=22 Identities=18% Similarity=0.049 Sum_probs=17.0
Q ss_pred cCCcEEEEcCCCChHHHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFTIP 46 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~~ 46 (433)
.|+-+++.||+|+|||..++..
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~ 54 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTL 54 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHH
T ss_pred CCeEEEEEcCCCCCHHHHHHHH
Confidence 3456999999999999765443
No 134
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=86.35 E-value=0.38 Score=36.12 Aligned_cols=18 Identities=17% Similarity=0.205 Sum_probs=15.1
Q ss_pred CcEEEEcCCCChHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~ 44 (433)
+.+++.|++|+|||.++-
T Consensus 3 ~~Iil~G~~GsGKSTia~ 20 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGR 20 (170)
T ss_dssp CCEEEESCTTSSHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH
Confidence 568889999999998654
No 135
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=86.28 E-value=0.24 Score=42.57 Aligned_cols=23 Identities=26% Similarity=0.508 Sum_probs=17.8
Q ss_pred HHhhcCCc--EEEEcCCCChHHHHH
Q 013962 21 PVALSGRD--LLGCAETGSGKTAAF 43 (433)
Q Consensus 21 ~~~~~~~~--~l~~~~TGsGKT~~~ 43 (433)
..+++|.+ ++..|+||||||.+.
T Consensus 73 ~~~l~G~n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 73 DDILNGYNGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp HHHTTTCCEEEEEECSTTSSHHHHH
T ss_pred HHhhccCceeEEecccCCCCcceee
Confidence 34456765 778999999999875
No 136
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.73 E-value=2.6 Score=31.25 Aligned_cols=73 Identities=14% Similarity=0.131 Sum_probs=52.3
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh----hCCCcEEEeccHHHHHHHHcCCCCCCC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL----RGGVSIVVATPGRFLDHLQQGNTSLSR 137 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~Ivv~T~~~l~~~~~~~~~~~~~ 137 (433)
..++||.|+++.-++.+.+.+.+. ++.+..++|+.+..+....+ .+..+|+|+| +.+. ...++..
T Consensus 27 ~~k~iIF~~~~~~~~~l~~~L~~~-----~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T-----~~~~-~Gid~~~ 95 (168)
T d1t5ia_ 27 FNQVVIFVKSVQRCIALAQLLVEQ-----NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVAT-----NLFG-RGMDIER 95 (168)
T ss_dssp CSSEEEECSSHHHHHHHHHHHHHT-----TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEES-----SCCS-TTCCGGG
T ss_pred CCeEEEEEeeeecchhhhhhhccc-----cccccccccccchhhhhhhhhhhccccceeeecc-----cccc-chhhccc
Confidence 567999999999888888777763 67888999998877665543 3578899999 3322 2345556
Q ss_pred ccEEEEcc
Q 013962 138 VSFVILDE 145 (433)
Q Consensus 138 ~~~vIiDE 145 (433)
+++||.=+
T Consensus 96 ~~~vi~~~ 103 (168)
T d1t5ia_ 96 VNIAFNYD 103 (168)
T ss_dssp CSEEEESS
T ss_pred chhhhhhh
Confidence 77776533
No 137
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=85.53 E-value=0.37 Score=38.49 Aligned_cols=22 Identities=27% Similarity=0.237 Sum_probs=16.5
Q ss_pred EEEEcCCCChHHHHHHHHHHHHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
+++.|+.|+|||. ++-.++.++
T Consensus 3 i~v~G~~GsGKTT-Ll~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTT-LTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHH-HHHHHHHHH
T ss_pred EEEEcCCCCcHHH-HHHHHHHHH
Confidence 5789999999995 455565554
No 138
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.47 E-value=0.34 Score=39.05 Aligned_cols=56 Identities=11% Similarity=0.058 Sum_probs=31.8
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVK 83 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~ 83 (433)
|+-++|.+++|+|||..++..+........ .......++++.....+..++...+.
T Consensus 37 G~~~~i~G~~GsGKT~lalq~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (258)
T d1v5wa_ 37 MAITEAFGEFRTGKTQLSHTLCVTAQLPGA--GGYPGGKIIFIDTENTFRPDRLRDIA 92 (258)
T ss_dssp SEEEEEECCTTCTHHHHHHHHHHHTTSCBT--TTBCCCEEEEEESSSCCCHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHhhhh--cccccceEEEechHHHHHHHHHHHHH
Confidence 346899999999999866554443322211 01124456666665555444444443
No 139
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=85.39 E-value=0.17 Score=37.48 Aligned_cols=37 Identities=30% Similarity=0.306 Sum_probs=25.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQ 76 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~ 76 (433)
+++.|+-|+|||. +.-.++..+- ..--|-+||=.|++
T Consensus 36 i~L~G~LGaGKTt-fvr~~~~~lg----------~~~~V~SPTF~l~~ 72 (158)
T d1htwa_ 36 VYLNGDLGAGKTT-LTRGMLQGIG----------HQGNVKSPTYTLVE 72 (158)
T ss_dssp EEEECSTTSSHHH-HHHHHHHHTT----------CCSCCCCCTTTCEE
T ss_pred EEEecCCCccHHH-HHHHHHhhcc----------cccccCCCceEEEE
Confidence 7789999999994 5566666542 22236788877765
No 140
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=85.33 E-value=0.23 Score=42.79 Aligned_cols=24 Identities=33% Similarity=0.584 Sum_probs=18.6
Q ss_pred HHHhhcCCc--EEEEcCCCChHHHHH
Q 013962 20 MPVALSGRD--LLGCAETGSGKTAAF 43 (433)
Q Consensus 20 i~~~~~~~~--~l~~~~TGsGKT~~~ 43 (433)
+..+++|.+ ++..|+||||||.+.
T Consensus 67 v~~~l~G~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 67 VQSAVDGYNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp HHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHhcCCceeeeccccCCCCccccc
Confidence 455566765 778999999999875
No 141
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=85.19 E-value=0.23 Score=37.84 Aligned_cols=17 Identities=24% Similarity=0.294 Sum_probs=14.3
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
+++|.||+|||||..+-
T Consensus 2 ~I~i~G~pGSGKsT~a~ 18 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAE 18 (182)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37899999999998653
No 142
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=85.09 E-value=0.19 Score=38.05 Aligned_cols=15 Identities=20% Similarity=0.339 Sum_probs=13.0
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
-++++|++|||||..
T Consensus 16 liil~G~pGsGKST~ 30 (172)
T d1yj5a2 16 VVVAVGFPGAGKSTF 30 (172)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 378899999999964
No 143
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=85.04 E-value=0.23 Score=38.17 Aligned_cols=17 Identities=18% Similarity=0.241 Sum_probs=14.5
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
.+++.||+|||||..+-
T Consensus 5 ~I~i~GppGsGKsT~a~ 21 (189)
T d1zaka1 5 KVMISGAPASGKGTQCE 21 (189)
T ss_dssp CEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 58899999999997653
No 144
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=85.03 E-value=0.3 Score=41.84 Aligned_cols=23 Identities=26% Similarity=0.550 Sum_probs=17.9
Q ss_pred HHhhcCCc--EEEEcCCCChHHHHH
Q 013962 21 PVALSGRD--LLGCAETGSGKTAAF 43 (433)
Q Consensus 21 ~~~~~~~~--~l~~~~TGsGKT~~~ 43 (433)
..+++|.+ ++..|+||||||.+.
T Consensus 80 ~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 80 QHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHhccCceeeeeccCCCCCceee
Confidence 34456765 788999999999875
No 145
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=84.97 E-value=0.13 Score=43.87 Aligned_cols=18 Identities=28% Similarity=0.411 Sum_probs=15.6
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.+.++|+.||+|+|||..
T Consensus 27 ~~h~vLl~G~pG~GKT~l 44 (333)
T d1g8pa_ 27 GIGGVLVFGDRGTGKSTA 44 (333)
T ss_dssp GGCCEEEECCGGGCTTHH
T ss_pred CCCeEEEECCCCccHHHH
Confidence 457899999999999974
No 146
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=84.94 E-value=0.26 Score=42.13 Aligned_cols=24 Identities=25% Similarity=0.535 Sum_probs=18.5
Q ss_pred HHHhhcCCc--EEEEcCCCChHHHHH
Q 013962 20 MPVALSGRD--LLGCAETGSGKTAAF 43 (433)
Q Consensus 20 i~~~~~~~~--~l~~~~TGsGKT~~~ 43 (433)
+..+++|.+ ++..|+||||||.+.
T Consensus 73 v~~~l~G~n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 73 LDEVIMGYNCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp HHHHHTTCEEEEEEEECTTSSHHHHH
T ss_pred HHHHhccCCceEEeeeeccccceEEe
Confidence 344556765 778999999999875
No 147
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.84 E-value=0.47 Score=38.65 Aligned_cols=55 Identities=27% Similarity=0.295 Sum_probs=36.2
Q ss_pred HHHHhhc------CCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHH
Q 013962 19 AMPVALS------GRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKE 81 (433)
Q Consensus 19 ~i~~~~~------~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~ 81 (433)
+++.++. ++-+.+.+|.|+|||..++..+...... +..++|+-.-..+..++++.
T Consensus 47 ~lD~~lg~gG~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~--------g~~~vyIDtE~~~~~e~a~~ 107 (269)
T d1mo6a1 47 ALDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAA--------GGVAAFIDAEHALDPDYAKK 107 (269)
T ss_dssp HHHHHTSSSSBCSSSEEEEECSSSSSHHHHHHHHHHHHHHT--------TCEEEEEESSCCCCHHHHHH
T ss_pred HHHHhhccCCcccceeEEEecCCCcHHHHHHHHHHHHHhcC--------CCEEEEEECCccCCHHHHHH
Confidence 4555553 3558999999999998766555443322 67788877666665554433
No 148
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=84.70 E-value=0.25 Score=37.62 Aligned_cols=18 Identities=22% Similarity=0.226 Sum_probs=14.6
Q ss_pred cEEEEcCCCChHHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFTI 45 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~~ 45 (433)
++++.||+|||||..+-.
T Consensus 2 ~I~i~G~pGsGKsT~a~~ 19 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVK 19 (181)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 478899999999986543
No 149
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=84.62 E-value=0.26 Score=42.52 Aligned_cols=25 Identities=36% Similarity=0.595 Sum_probs=19.2
Q ss_pred HHHHhhcCCc--EEEEcCCCChHHHHH
Q 013962 19 AMPVALSGRD--LLGCAETGSGKTAAF 43 (433)
Q Consensus 19 ~i~~~~~~~~--~l~~~~TGsGKT~~~ 43 (433)
.+..+++|.+ ++..|+||||||.+.
T Consensus 116 lv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 116 LIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcccceeEEeeccCCCccceEe
Confidence 3445567765 788999999999874
No 150
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=84.52 E-value=0.27 Score=37.52 Aligned_cols=17 Identities=18% Similarity=0.272 Sum_probs=14.1
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
.+++.||+|||||..+-
T Consensus 2 ~I~i~G~pGSGKsT~a~ 18 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQAD 18 (182)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37889999999998653
No 151
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=84.48 E-value=0.29 Score=37.60 Aligned_cols=19 Identities=21% Similarity=0.242 Sum_probs=15.3
Q ss_pred CCcEEEEcCCCChHHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~ 44 (433)
+-.+++.||+|||||..+-
T Consensus 3 ~~riil~G~pGSGKsT~a~ 21 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAP 21 (190)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 3457889999999998654
No 152
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.20 E-value=0.14 Score=39.57 Aligned_cols=17 Identities=24% Similarity=0.251 Sum_probs=13.6
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
.+++.|++|||||.++-
T Consensus 21 vI~L~G~pGSGKTTiAk 37 (195)
T d1x6va3 21 TVWLTGLSGAGKTTVSM 37 (195)
T ss_dssp EEEEESSCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 46688999999997653
No 153
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=84.08 E-value=0.36 Score=41.14 Aligned_cols=25 Identities=32% Similarity=0.563 Sum_probs=18.8
Q ss_pred HHHhhcCCc--EEEEcCCCChHHHHHH
Q 013962 20 MPVALSGRD--LLGCAETGSGKTAAFT 44 (433)
Q Consensus 20 i~~~~~~~~--~l~~~~TGsGKT~~~~ 44 (433)
+..+++|.+ ++..|+||||||.+..
T Consensus 75 v~~~l~G~n~~i~aYGqtgSGKT~T~~ 101 (342)
T d1f9va_ 75 VQSSLDGYNVCIFAYGQTGSGKTFTML 101 (342)
T ss_dssp HGGGGGTCCEEEEEECCTTSSHHHHHH
T ss_pred hcchhcccccceeeeeccCCccccccc
Confidence 344556665 7789999999998863
No 154
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=83.86 E-value=0.35 Score=37.28 Aligned_cols=22 Identities=18% Similarity=0.220 Sum_probs=17.0
Q ss_pred hhcCCcEEEEcCCCChHHHHHH
Q 013962 23 ALSGRDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 23 ~~~~~~~l~~~~TGsGKT~~~~ 44 (433)
+...+-+++.||+|||||..+-
T Consensus 5 ~~~~~iI~l~G~pGSGKsT~a~ 26 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGKGTQCE 26 (194)
T ss_dssp HHTSCEEEEEECTTSSHHHHHH
T ss_pred ccCCcEEEEECCCCCCHHHHHH
Confidence 3445668899999999997543
No 155
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=83.75 E-value=0.34 Score=39.10 Aligned_cols=23 Identities=22% Similarity=0.278 Sum_probs=17.7
Q ss_pred HHhhcCCcEEEEcCCCChHHHHH
Q 013962 21 PVALSGRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 21 ~~~~~~~~~l~~~~TGsGKT~~~ 43 (433)
.....+..++|.|++|+|||.++
T Consensus 18 ~~a~~~~pvlI~Ge~GtGK~~~A 40 (247)
T d1ny5a2 18 KISCAECPVLITGESGVGKEVVA 40 (247)
T ss_dssp HHTTCCSCEEEECSTTSSHHHHH
T ss_pred HHhCCCCCEEEECCCCcCHHHHH
Confidence 33345567999999999999754
No 156
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=83.57 E-value=0.27 Score=37.34 Aligned_cols=16 Identities=13% Similarity=0.098 Sum_probs=13.7
Q ss_pred cEEEEcCCCChHHHHH
Q 013962 28 DLLGCAETGSGKTAAF 43 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~ 43 (433)
++++.||+|||||..+
T Consensus 2 ~I~i~G~pGSGKsT~~ 17 (179)
T d1e4va1 2 RIILLGAPVAGKGTQA 17 (179)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4688999999999865
No 157
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=83.49 E-value=0.31 Score=37.66 Aligned_cols=17 Identities=18% Similarity=0.253 Sum_probs=14.0
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
.+++.||+|||||..+-
T Consensus 10 iI~i~GppGSGKsT~a~ 26 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCE 26 (196)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 37889999999997653
No 158
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.41 E-value=1.1 Score=34.16 Aligned_cols=15 Identities=20% Similarity=0.472 Sum_probs=13.1
Q ss_pred EEEEcCCCChHHHHH
Q 013962 29 LLGCAETGSGKTAAF 43 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~ 43 (433)
++|.||+|+|||.++
T Consensus 3 Ivl~GPsGsGK~tl~ 17 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLL 17 (190)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 789999999999753
No 159
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=83.36 E-value=0.29 Score=37.74 Aligned_cols=17 Identities=24% Similarity=0.268 Sum_probs=14.1
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
-+++.||+|||||..+-
T Consensus 8 iI~i~G~pGSGKsT~a~ 24 (194)
T d1qf9a_ 8 VVFVLGGPGSGKGTQCA 24 (194)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47889999999997653
No 160
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=83.33 E-value=0.31 Score=37.48 Aligned_cols=17 Identities=24% Similarity=0.186 Sum_probs=14.4
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
.+++.||+|||||..+-
T Consensus 8 rIiliG~PGSGKtT~a~ 24 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVSS 24 (189)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 58889999999997653
No 161
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.56 E-value=0.36 Score=37.13 Aligned_cols=16 Identities=19% Similarity=0.322 Sum_probs=13.8
Q ss_pred EEEEcCCCChHHHHHH
Q 013962 29 LLGCAETGSGKTAAFT 44 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~ 44 (433)
++|.||+|||||..+-
T Consensus 4 I~i~GppGSGKsT~a~ 19 (194)
T d1teva_ 4 VFVLGGPGAGKGTQCA 19 (194)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 6899999999998654
No 162
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.42 E-value=0.65 Score=35.14 Aligned_cols=17 Identities=18% Similarity=0.266 Sum_probs=14.1
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
.+++.||+|||||..+-
T Consensus 4 rIvl~G~pGSGKtT~a~ 20 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAP 20 (180)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47888999999998653
No 163
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.38 E-value=2.4 Score=33.17 Aligned_cols=73 Identities=15% Similarity=0.191 Sum_probs=52.3
Q ss_pred CCCeEEEEEeccccHHHHHHHHHHC----CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecc------cccCcccCC
Q 013962 241 PFPLTIVFVERKTRCDEVSEALVAE----GLHAVALHGGRNQSDRESALRDFRNGSTNILVATDV------ASRGLDVMG 310 (433)
Q Consensus 241 ~~~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~------~~~Gidip~ 310 (433)
....++|++|+++-+..+.+.+... ++.+..+.|+.+..+....++ . ..+|+|+|+- -...+++.+
T Consensus 84 ~~~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~---~-~~~Ilv~TPgrl~~~~~~~~~~~~~ 159 (222)
T d2j0sa1 84 RETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLD---Y-GQHVVAGTPGRVFDMIRRRSLRTRA 159 (222)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHH---H-CCSEEEECHHHHHHHHHTTSSCCTT
T ss_pred cCceeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhc---c-CCeEEeCCCCcHHhccccccccccc
Confidence 3456999999999999988887654 567788888887766555443 2 3579999941 145667777
Q ss_pred CcEEEEc
Q 013962 311 VAHVVNL 317 (433)
Q Consensus 311 ~~~Vi~~ 317 (433)
++++|.-
T Consensus 160 l~~lVlD 166 (222)
T d2j0sa1 160 IKMLVLD 166 (222)
T ss_dssp CCEEEEE
T ss_pred ceeeeec
Confidence 8877753
No 164
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=82.36 E-value=0.22 Score=40.92 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=16.0
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHh
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCV 52 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~ 52 (433)
+++.||+|+|||.++ -.++..+.
T Consensus 49 l~l~GppGtGKT~l~-~~l~~~l~ 71 (287)
T d1w5sa2 49 YGSIGRVGIGKTTLA-KFTVKRVS 71 (287)
T ss_dssp EECTTCCSSSHHHHH-HHHHHHHH
T ss_pred EEeECCCCCCHHHHH-HHHHHHHH
Confidence 456799999999764 44555443
No 165
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=81.91 E-value=0.59 Score=35.50 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=21.1
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcC
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAP 70 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P 70 (433)
+++.|+.|+|||.++ -.+...+... +..+.++.+
T Consensus 4 ivi~G~~GsGKTT~~-~~La~~L~~~-------~~~~~~~~~ 37 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVL-AKVKEILDNQ-------GINNKIINY 37 (194)
T ss_dssp EEEEECTTSCHHHHH-HHHHHHHHTT-------TCCEEEEEH
T ss_pred EEEECCCCCCHHHHH-HHHHHHHHHc-------CCCEEEEEC
Confidence 567999999999654 3344444332 555555554
No 166
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=81.06 E-value=0.33 Score=38.90 Aligned_cols=26 Identities=19% Similarity=0.028 Sum_probs=19.6
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
+.-++|.|++|+|||..++..+...+
T Consensus 34 G~l~~i~G~~G~GKT~~~l~~a~~~~ 59 (258)
T d2i1qa2 34 QSVTEFAGVFGSGKTQIMHQSCVNLQ 59 (258)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 45689999999999987655555443
No 167
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=81.04 E-value=0.82 Score=37.21 Aligned_cols=65 Identities=15% Similarity=0.158 Sum_probs=37.1
Q ss_pred HHHhhcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCC---CCCCCceEEEEcCcHHHHHHHHHHHHHHh
Q 013962 20 MPVALSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPV---GRGDGPLALVLAPTRELAQQIEKEVKALS 86 (433)
Q Consensus 20 i~~~~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~---~~~~~~~~lvl~P~~~L~~q~~~~~~~~~ 86 (433)
++-+..+.-++|.|++|+|||..++..++ .+...... ....+..++++.-- .-..++.+++..+.
T Consensus 23 i~G~~pg~~~~i~G~~G~GKS~l~l~la~-~ia~g~~~~~~~~~~~~~vl~~~~E-~~~~~~~~Rl~~~~ 90 (274)
T d1nlfa_ 23 LPNMVAGTVGALVSPGGAGKSMLALQLAA-QIAGGPDLLEVGELPTGPVIYLPAE-DPPTAIHHRLHALG 90 (274)
T ss_dssp ETTEETTSEEEEEESTTSSHHHHHHHHHH-HHHTCCCTTCCCCCCCCCEEEEESS-SCHHHHHHHHHHHH
T ss_pred hCCccCCcEEEEEeCCCCCHHHHHHHHHH-HHHcCCCcccccccCCCceEEEecc-chHHHHHHHHHHHh
Confidence 34455567789999999999976554443 33322110 11224467776643 33455666666654
No 168
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=80.97 E-value=0.47 Score=35.37 Aligned_cols=17 Identities=24% Similarity=0.178 Sum_probs=13.9
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
++++.|++|+|||.++-
T Consensus 3 ~IvliG~~G~GKSTig~ 19 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGR 19 (165)
T ss_dssp SEEEECSTTSSHHHHHH
T ss_pred cEEEECCCCCCHHHHHH
Confidence 46778999999998654
No 169
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=80.65 E-value=0.38 Score=36.63 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=14.4
Q ss_pred CCcEEEEcCCCChHHHH
Q 013962 26 GRDLLGCAETGSGKTAA 42 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~ 42 (433)
|+-+++.||+|+|||..
T Consensus 2 G~iivl~GpsG~GK~tl 18 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTV 18 (182)
T ss_dssp CCEEEEECSTTSSHHHH
T ss_pred CeEEEEECCCCCCHHHH
Confidence 45678999999999975
No 170
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.52 E-value=0.4 Score=36.66 Aligned_cols=16 Identities=25% Similarity=0.511 Sum_probs=13.6
Q ss_pred CcEEEEcCCCChHHHH
Q 013962 27 RDLLGCAETGSGKTAA 42 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~ 42 (433)
+-++|.||+|+|||..
T Consensus 2 rpIvl~GpsG~GK~tl 17 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTL 17 (186)
T ss_dssp CCEEEECCTTSSHHHH
T ss_pred CeEEEECCCCCCHHHH
Confidence 3489999999999974
No 171
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=79.70 E-value=0.73 Score=37.49 Aligned_cols=53 Identities=19% Similarity=0.161 Sum_probs=34.9
Q ss_pred HHHHhhc-C-----CcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHH
Q 013962 19 AMPVALS-G-----RDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIE 79 (433)
Q Consensus 19 ~i~~~~~-~-----~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~ 79 (433)
+++.++. | +-+.+.+|.|+|||..++..+.. .... +..++|+-.-..+..+++
T Consensus 44 ~lD~~Lg~GGip~g~itei~G~~~sGKT~l~l~~~~~-aqk~-------g~~v~yiDtE~~~~~~~a 102 (268)
T d1xp8a1 44 SLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQ-AQKA-------GGTCAFIDAEHALDPVYA 102 (268)
T ss_dssp HHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHH-HHHT-------TCCEEEEESSCCCCHHHH
T ss_pred HHHHHhcCCCccCceEEEEecCCccchHHHHHHHHHH-HHhC-------CCEEEEEECCccCCHHHH
Confidence 4555664 3 45889999999999876554444 3332 677888876656655443
No 172
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=79.59 E-value=0.45 Score=37.11 Aligned_cols=17 Identities=29% Similarity=0.477 Sum_probs=14.6
Q ss_pred CCcEEEEcCCCChHHHH
Q 013962 26 GRDLLGCAETGSGKTAA 42 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~ 42 (433)
|+-+++.||+|+|||..
T Consensus 2 G~livi~GPSG~GK~tl 18 (205)
T d1s96a_ 2 GTLYIVSAPSGAGKSSL 18 (205)
T ss_dssp CCEEEEECCTTSCHHHH
T ss_pred CeEEEEECCCCCCHHHH
Confidence 56689999999999974
No 173
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=79.23 E-value=0.38 Score=36.87 Aligned_cols=15 Identities=33% Similarity=0.040 Sum_probs=12.2
Q ss_pred EEEEcCCCChHHHHH
Q 013962 29 LLGCAETGSGKTAAF 43 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~ 43 (433)
+-|.|++|||||..+
T Consensus 25 IgI~G~~GSGKSTla 39 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLA 39 (198)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 348999999999754
No 174
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=79.03 E-value=0.49 Score=39.70 Aligned_cols=17 Identities=35% Similarity=0.395 Sum_probs=14.4
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
++++.||||+|||..+-
T Consensus 54 ~~lf~Gp~GvGKT~lak 70 (315)
T d1r6bx3 54 SFLFAGPTGVGKTEVTV 70 (315)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCcchhHHHHH
Confidence 48889999999998654
No 175
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=78.86 E-value=0.61 Score=39.39 Aligned_cols=20 Identities=35% Similarity=0.458 Sum_probs=15.8
Q ss_pred cCCc--EEEEcCCCChHHHHHH
Q 013962 25 SGRD--LLGCAETGSGKTAAFT 44 (433)
Q Consensus 25 ~~~~--~l~~~~TGsGKT~~~~ 44 (433)
+|.+ ++..|+||||||.+..
T Consensus 82 ~G~n~~i~aYGqTGSGKTyTm~ 103 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTGSGKTYTML 103 (330)
T ss_dssp HCCEEEEEEECCTTSSHHHHHH
T ss_pred cCCCeEEEeeeccccccceeee
Confidence 4655 6778999999998854
No 176
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=78.29 E-value=1.2 Score=34.41 Aligned_cols=22 Identities=14% Similarity=0.048 Sum_probs=15.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHHH
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
+++.|.+|||||..+ -.+...+
T Consensus 5 i~l~GlpgsGKSTla-~~L~~~l 26 (213)
T d1bifa1 5 IVMVGLPARGKTYIS-KKLTRYL 26 (213)
T ss_dssp EEEECCTTSSHHHHH-HHHHHHH
T ss_pred EEEECCCCCCHHHHH-HHHHHHH
Confidence 678999999999765 3333443
No 177
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=77.14 E-value=0.58 Score=35.27 Aligned_cols=20 Identities=25% Similarity=0.305 Sum_probs=16.6
Q ss_pred cCCcEEEEcCCCChHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~ 44 (433)
.+..+++.++.|+|||.+++
T Consensus 14 ~g~gvli~G~sG~GKS~lal 33 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECAL 33 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHH
Confidence 45679999999999997654
No 178
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.84 E-value=0.53 Score=36.79 Aligned_cols=15 Identities=27% Similarity=0.264 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHHHH
Q 013962 29 LLGCAETGSGKTAAF 43 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~ 43 (433)
+-|.|++|||||..+
T Consensus 5 IgI~G~~gSGKSTla 19 (213)
T d1uj2a_ 5 IGVSGGTASGKSSVC 19 (213)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 347899999999654
No 179
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.87 E-value=0.66 Score=35.12 Aligned_cols=16 Identities=19% Similarity=0.333 Sum_probs=13.8
Q ss_pred CcEEEEcCCCChHHHH
Q 013962 27 RDLLGCAETGSGKTAA 42 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~ 42 (433)
+-+++.||+|+|||..
T Consensus 4 k~ivl~Gpsg~GK~tl 19 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHI 19 (178)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred CcEEEECCCCCCHHHH
Confidence 4588999999999974
No 180
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=75.36 E-value=0.5 Score=39.53 Aligned_cols=17 Identities=24% Similarity=0.241 Sum_probs=13.3
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
.+++.+|+|+|||+.+-
T Consensus 125 ~~l~~G~pG~GKT~la~ 141 (321)
T d1w44a_ 125 MVIVTGKGNSGKTPLVH 141 (321)
T ss_dssp EEEEECSSSSCHHHHHH
T ss_pred eEEEECCCCccHHHHHH
Confidence 35568999999998653
No 181
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=74.84 E-value=0.81 Score=34.40 Aligned_cols=20 Identities=25% Similarity=0.368 Sum_probs=16.5
Q ss_pred cCCcEEEEcCCCChHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~ 44 (433)
.++-+++.++.|+|||.+++
T Consensus 13 ~g~gvl~~G~sG~GKStlal 32 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETAL 32 (176)
T ss_dssp TTEEEEEECCTTSCHHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHHH
Confidence 45679999999999997654
No 182
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=74.74 E-value=0.71 Score=38.66 Aligned_cols=17 Identities=35% Similarity=0.331 Sum_probs=14.0
Q ss_pred cEEEEcCCCChHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFT 44 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~ 44 (433)
.+++.||||+|||.++-
T Consensus 55 ~~lf~Gp~G~GKt~lak 71 (315)
T d1qvra3 55 SFLFLGPTGVGKTELAK 71 (315)
T ss_dssp EEEEBSCSSSSHHHHHH
T ss_pred EEEEECCCcchHHHHHH
Confidence 36788999999998653
No 183
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=74.44 E-value=3.2 Score=32.63 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=47.4
Q ss_pred CCeEEEEEeccccHHHHHHHHHHC----CCc----eeeecCCCCHHHHHHHHHHHhcCCCcEEEEec-ccccC-cccCCC
Q 013962 242 FPLTIVFVERKTRCDEVSEALVAE----GLH----AVALHGGRNQSDRESALRDFRNGSTNILVATD-VASRG-LDVMGV 311 (433)
Q Consensus 242 ~~~~lvf~~~~~~~~~l~~~L~~~----~~~----~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~-~~~~G-idip~~ 311 (433)
+.++|+.+|++.-++...+.+++. ++. +..+++..+..++...++... ..+|+|+|+ .+... .++..+
T Consensus 86 ~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~Ilv~Tp~~l~~~~~~~~~~ 163 (237)
T d1gkub1 86 GKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLR--NFKIVITTTQFLSKHYRELGHF 163 (237)
T ss_dssp SCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGG--GCSEEEEEHHHHHHCSTTSCCC
T ss_pred cCeEEEEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhcccc--ccceeccChHHHHHhhhhcCCC
Confidence 457999999999998888887653 333 345566667667666655443 456999994 33322 334556
Q ss_pred cEEEE
Q 013962 312 AHVVN 316 (433)
Q Consensus 312 ~~Vi~ 316 (433)
++||.
T Consensus 164 ~~vVv 168 (237)
T d1gkub1 164 DFIFV 168 (237)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 66664
No 184
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=74.07 E-value=0.89 Score=35.50 Aligned_cols=16 Identities=19% Similarity=0.218 Sum_probs=13.0
Q ss_pred EEEEcCCCChHHHHHH
Q 013962 29 LLGCAETGSGKTAAFT 44 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~ 44 (433)
+.|.||+|||||..+-
T Consensus 6 I~I~GppGSGKgT~ak 21 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCK 21 (225)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 4667999999998654
No 185
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=73.92 E-value=0.71 Score=36.88 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=15.3
Q ss_pred cCCcEEEEcCCCChHHH
Q 013962 25 SGRDLLGCAETGSGKTA 41 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~ 41 (433)
.|..+.|.+|+|||||.
T Consensus 28 ~Ge~vaIvG~sGsGKST 44 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKST 44 (241)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCCHHH
Confidence 57789999999999996
No 186
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=73.32 E-value=1.7 Score=35.53 Aligned_cols=29 Identities=28% Similarity=0.260 Sum_probs=22.6
Q ss_pred HHHHHHhh---cCCcEEEEcCCCChHHHHHHH
Q 013962 17 AQAMPVAL---SGRDLLGCAETGSGKTAAFTI 45 (433)
Q Consensus 17 ~~~i~~~~---~~~~~l~~~~TGsGKT~~~~~ 45 (433)
.+++..+. .|+..+|.++.|+|||.....
T Consensus 31 ~r~ID~l~PigrGQr~~I~g~~g~GKT~l~~~ 62 (289)
T d1xpua3 31 ARVLDLASPIGRGQRGLIVAPPKAGKTMLLQN 62 (289)
T ss_dssp HHHHHHHSCCBTTCEEEEEECSSSSHHHHHHH
T ss_pred ceeeeecccccCCCeeeEeCCCCCCHHHHHHH
Confidence 35666655 789999999999999976443
No 187
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=73.04 E-value=0.87 Score=33.99 Aligned_cols=19 Identities=26% Similarity=0.399 Sum_probs=16.1
Q ss_pred cCCcEEEEcCCCChHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~ 43 (433)
.+..+++.++.|+|||.++
T Consensus 14 ~g~gvli~G~sg~GKS~la 32 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETA 32 (169)
T ss_dssp TTEEEEEEESTTSSHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHH
Confidence 4567999999999999754
No 188
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=72.86 E-value=0.83 Score=35.31 Aligned_cols=17 Identities=29% Similarity=0.288 Sum_probs=15.0
Q ss_pred cCCcEEEEcCCCChHHH
Q 013962 25 SGRDLLGCAETGSGKTA 41 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~ 41 (433)
.|+-+.+.||.|+|||.
T Consensus 26 ~Gei~~l~G~NGsGKST 42 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTT 42 (200)
T ss_dssp TTCCEEEECCTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 56778899999999996
No 189
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=72.68 E-value=1.9 Score=35.33 Aligned_cols=35 Identities=23% Similarity=0.243 Sum_probs=25.0
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEc
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLA 69 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~ 69 (433)
+-+++.+.=|.|||.++...+...... |.+++++-
T Consensus 9 ~~i~~sGKGGVGKTTvaa~lA~~lA~~--------G~rVLlvD 43 (296)
T d1ihua1 9 PYLFFTGKGGVGKTSISCATAIRLAEQ--------GKRVLLVS 43 (296)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHT--------TCCEEEEE
T ss_pred eEEEEECCCcChHHHHHHHHHHHHHHC--------CCCEEEEe
Confidence 347789999999998876544444332 77888776
No 190
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=72.44 E-value=1.8 Score=35.80 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=15.4
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHh
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCV 52 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~ 52 (433)
+-|+|+.|||||..+ -.+..++
T Consensus 83 IGIaG~sgSGKSTla--~~L~~lL 104 (308)
T d1sq5a_ 83 ISIAGSVAVGKSTTA--RVLQALL 104 (308)
T ss_dssp EEEEECTTSSHHHHH--HHHHHHH
T ss_pred EEEeCCCCCCCcHHH--HHHHHHH
Confidence 567999999999754 2444444
No 191
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=72.07 E-value=0.8 Score=36.90 Aligned_cols=17 Identities=24% Similarity=0.421 Sum_probs=15.2
Q ss_pred cCCcEEEEcCCCChHHH
Q 013962 25 SGRDLLGCAETGSGKTA 41 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~ 41 (433)
.|+.+.|.+++|||||.
T Consensus 43 ~Ge~vaivG~sGsGKST 59 (255)
T d2hyda1 43 KGETVAFVGMSGGGKST 59 (255)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCcHHH
Confidence 56779999999999996
No 192
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=71.45 E-value=0.86 Score=36.03 Aligned_cols=25 Identities=24% Similarity=0.309 Sum_probs=18.4
Q ss_pred cCCcEEEEcCCCChHHHHHHHHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
.|..+-+.+|+|||||.. +-++..+
T Consensus 30 ~Ge~~~iiG~sGsGKSTL--l~~i~gl 54 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKSTM--LNIIGCL 54 (230)
T ss_dssp TTCEEEEECSTTSSHHHH--HHHHTTS
T ss_pred CCCEEEEECCCCCCcchh--hHhccCC
Confidence 577899999999999953 3344443
No 193
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.39 E-value=0.96 Score=36.34 Aligned_cols=18 Identities=28% Similarity=0.351 Sum_probs=15.6
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|+.+.+.+|+|||||..
T Consensus 39 ~Ge~vaivG~sGsGKSTL 56 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKSTV 56 (251)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 567899999999999963
No 194
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=70.55 E-value=1.4 Score=34.28 Aligned_cols=17 Identities=24% Similarity=0.215 Sum_probs=13.0
Q ss_pred EEEEcCCCChHHHHHHH
Q 013962 29 LLGCAETGSGKTAAFTI 45 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~ 45 (433)
+.|-||.|||||.++-.
T Consensus 6 IaIdGp~GsGKgT~ak~ 22 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKI 22 (223)
T ss_dssp EEEECSSCSSHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 34669999999987643
No 195
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=70.50 E-value=0.18 Score=39.41 Aligned_cols=94 Identities=18% Similarity=0.312 Sum_probs=55.2
Q ss_pred CceEEEEcCcHHHHHHH-----HHHHHHHhc-cCCCceEEEEECCCCHHHHHH----HhhCCCcEEEeccHHHHHHHHcC
Q 013962 62 GPLALVLAPTRELAQQI-----EKEVKALSR-SLDSFKTAIVVGGTNIAEQRS----ELRGGVSIVVATPGRFLDHLQQG 131 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~Ivv~T~~~l~~~~~~~ 131 (433)
+.++.||||..+=.+.. .+....+.. .++++++..++|..+..+... ...++.+|+|+| ..+. .
T Consensus 29 g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g~~~iLVaT-----tViE-~ 102 (206)
T d1gm5a4 29 GGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVST-----TVIE-V 102 (206)
T ss_dssp SCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTTSSSBCCCS-----SCCC-S
T ss_pred CCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEEEe-----hhhh-c
Confidence 88999999986433221 122222222 235778888888876443333 335679999999 4433 3
Q ss_pred CCCCCCccEEEEcccchhccCCCHHHHHHHHhhC
Q 013962 132 NTSLSRVSFVILDEADRMLDMGFEPQIREVMQNL 165 (433)
Q Consensus 132 ~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~ 165 (433)
..+..+..++|+..++++.- ..+..+..+.
T Consensus 103 GIDip~a~~iii~~a~~fgl----sqlhQlrGRv 132 (206)
T d1gm5a4 103 GIDVPRANVMVIENPERFGL----AQLHQLRGRV 132 (206)
T ss_dssp CSCCTTCCEEEBCSCSSSCT----THHHHHHHTS
T ss_pred cccccCCcEEEEEccCCccH----HHHHhhhhhe
Confidence 56778899999999997642 2445544443
No 196
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=70.28 E-value=2.3 Score=34.43 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=22.4
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEc
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLA 69 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~ 69 (433)
+++.+.=|.|||.++...+...... |.+++++=
T Consensus 23 ii~sGKGGVGKTT~a~nLA~~lA~~--------G~rVllvD 55 (279)
T d1ihua2 23 IMLMGKGGVGKTTMAAAIAVRLADM--------GFDVHLTT 55 (279)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHT--------TCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC--------CCcEEEEe
Confidence 6778999999998776554444332 66666554
No 197
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=70.27 E-value=0.78 Score=36.66 Aligned_cols=17 Identities=18% Similarity=0.278 Sum_probs=14.7
Q ss_pred cCCcEEEEcCCCChHHH
Q 013962 25 SGRDLLGCAETGSGKTA 41 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~ 41 (433)
.|+.+.+.+|+|||||.
T Consensus 27 ~Ge~vaivG~sGsGKST 43 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKST 43 (242)
T ss_dssp TTEEEEEECCTTSSHHH
T ss_pred CCCEEEEECCCCCCHHH
Confidence 45678899999999996
No 198
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=70.08 E-value=12 Score=28.25 Aligned_cols=76 Identities=24% Similarity=0.276 Sum_probs=47.4
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCC-------------------------ceEEEEECCCCHHHHHHHh----hC
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDS-------------------------FKTAIVVGGTNIAEQRSEL----RG 112 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~----~~ 112 (433)
+..+||.||++.-+...+..+......... ..++..+++.......... .+
T Consensus 40 ~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~g 119 (201)
T d2p6ra4 40 NGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRRG 119 (201)
T ss_dssp TCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHTT
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhCC
Confidence 667999999998888888777765432110 1156777887765544322 46
Q ss_pred CCcEEEeccHHHHHHHHcCCCCCCCccEEEE
Q 013962 113 GVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 143 (433)
Q Consensus 113 ~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIi 143 (433)
..+|+|+|.. +.. ..++....+||.
T Consensus 120 ~i~vlvaT~~-----l~~-Gin~p~~~vvi~ 144 (201)
T d2p6ra4 120 NIKVVVATPT-----LAA-GVNLPARRVIVR 144 (201)
T ss_dssp SCCEEEECST-----TTS-SSCCCBSEEEEC
T ss_pred CceEEEechH-----HHh-hcCCCCceEEEe
Confidence 7899999943 222 344554455553
No 199
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=69.67 E-value=0.97 Score=36.37 Aligned_cols=18 Identities=28% Similarity=0.536 Sum_probs=15.5
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|+.+.|.+|+|||||..
T Consensus 40 ~Ge~iaivG~sGsGKSTL 57 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTI 57 (253)
T ss_dssp TTCEEEEEECTTSSHHHH
T ss_pred CCCEEEEECCCCChHHHH
Confidence 567899999999999963
No 200
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=69.59 E-value=0.96 Score=35.96 Aligned_cols=18 Identities=28% Similarity=0.453 Sum_probs=15.4
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|+-+-+.+|.|+|||..
T Consensus 28 ~Ge~~~liG~sGaGKSTl 45 (240)
T d1g2912 28 DGEFMILLGPSGCGKTTT 45 (240)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCChHHHH
Confidence 567789999999999963
No 201
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=68.99 E-value=2.1 Score=34.92 Aligned_cols=14 Identities=29% Similarity=0.299 Sum_probs=11.3
Q ss_pred EEEcCCCChHHHHH
Q 013962 30 LGCAETGSGKTAAF 43 (433)
Q Consensus 30 l~~~~TGsGKT~~~ 43 (433)
-|+|++|||||..+
T Consensus 31 Gi~G~qGSGKSTl~ 44 (286)
T d1odfa_ 31 FFSGPQGSGKSFTS 44 (286)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EeECCCCCCHHHHH
Confidence 36899999999543
No 202
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=68.24 E-value=1.1 Score=35.34 Aligned_cols=25 Identities=24% Similarity=0.363 Sum_probs=18.1
Q ss_pred cCCcEEEEcCCCChHHHHHHHHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
.|.-+.+.+|.|+|||.. +-++.-+
T Consensus 25 ~Gei~~liGpsGsGKSTL--l~~i~Gl 49 (232)
T d2awna2 25 EGEFVVFVGPSGCGKSTL--LRMIAGL 49 (232)
T ss_dssp TTCEEEEECCTTSSHHHH--HHHHHTS
T ss_pred CCCEEEEECCCCChHHHH--HHHHhcC
Confidence 567789999999999953 3344443
No 203
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=68.10 E-value=1 Score=35.82 Aligned_cols=17 Identities=24% Similarity=0.358 Sum_probs=15.1
Q ss_pred cCCcEEEEcCCCChHHH
Q 013962 25 SGRDLLGCAETGSGKTA 41 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~ 41 (433)
.|.-+-+.+|.|||||.
T Consensus 30 ~Ge~~~iiG~sGsGKST 46 (240)
T d3dhwc1 30 AGQIYGVIGASGAGKST 46 (240)
T ss_dssp SSCEEEEEESTTSSHHH
T ss_pred CCCEEEEECCCCCCHHH
Confidence 56778999999999996
No 204
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.17 E-value=1.4 Score=36.07 Aligned_cols=17 Identities=47% Similarity=0.536 Sum_probs=14.5
Q ss_pred cCCcEEEEcCCCChHHH
Q 013962 25 SGRDLLGCAETGSGKTA 41 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~ 41 (433)
.|+-+.|.||+|+|||.
T Consensus 61 ~Ge~vaivG~nGsGKST 77 (281)
T d1r0wa_ 61 KGEMLAITGSTGSGKTS 77 (281)
T ss_dssp TTCEEEEEESTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 35668899999999996
No 205
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=66.88 E-value=3.3 Score=29.01 Aligned_cols=38 Identities=13% Similarity=0.097 Sum_probs=32.8
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHCCCceeeecCCCC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRN 277 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 277 (433)
.+..++++||.+-..+...+..|.+.|+.+..+.|++.
T Consensus 78 ~~~~~ivl~C~~G~rS~~aa~~L~~~G~~v~~l~GG~~ 115 (130)
T d1yt8a4 78 VRGARLVLVDDDGVRANMSASWLAQMGWQVAVLDGLSE 115 (130)
T ss_dssp SBTCEEEEECSSSSHHHHHHHHHHHTTCEEEEECSCCG
T ss_pred CccceEEeecCCCccHHHHHHHHHHcCCCeEEEcCchH
Confidence 34467999999988899999999999999989988864
No 206
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=66.66 E-value=1.2 Score=33.90 Aligned_cols=14 Identities=43% Similarity=0.444 Sum_probs=12.3
Q ss_pred EEEEcCCCChHHHH
Q 013962 29 LLGCAETGSGKTAA 42 (433)
Q Consensus 29 ~l~~~~TGsGKT~~ 42 (433)
+.+.|+.|||||..
T Consensus 12 I~ieG~~GsGKTTl 25 (197)
T d2vp4a1 12 VLIEGNIGSGKTTY 25 (197)
T ss_dssp EEEECSTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 67899999999963
No 207
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=66.54 E-value=3.2 Score=32.01 Aligned_cols=16 Identities=19% Similarity=0.158 Sum_probs=13.7
Q ss_pred cEEEEcCCCChHHHHH
Q 013962 28 DLLGCAETGSGKTAAF 43 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~ 43 (433)
-+.+.|.+|||||..+
T Consensus 26 vIwltGlsGsGKTTia 41 (208)
T d1m7ga_ 26 TIWLTGLSASGKSTLA 41 (208)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4888999999999754
No 208
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=66.45 E-value=2.5 Score=35.20 Aligned_cols=24 Identities=17% Similarity=-0.000 Sum_probs=17.0
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
+=|.+++|+|||. .+-.+...+..
T Consensus 54 igitG~pGaGKST-li~~l~~~~~~ 77 (323)
T d2qm8a1 54 VGITGVPGVGKST-TIDALGSLLTA 77 (323)
T ss_dssp EEEECCTTSCHHH-HHHHHHHHHHH
T ss_pred EeeeCCCCCCHHH-HHHHHHHHHhh
Confidence 6779999999995 44555555444
No 209
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=66.21 E-value=1.6 Score=34.38 Aligned_cols=18 Identities=39% Similarity=0.431 Sum_probs=15.3
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|.-+.+.+|.|+|||..
T Consensus 25 ~Ge~~~liGpsGaGKSTl 42 (229)
T d3d31a2 25 SGEYFVILGPTGAGKTLF 42 (229)
T ss_dssp TTCEEEEECCCTHHHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 566789999999999963
No 210
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=65.66 E-value=1.8 Score=35.38 Aligned_cols=15 Identities=13% Similarity=0.277 Sum_probs=9.6
Q ss_pred EEEEcCCCChHHHHH
Q 013962 29 LLGCAETGSGKTAAF 43 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~ 43 (433)
+-|+|++|||||.++
T Consensus 7 IgIaG~SGSGKTTva 21 (288)
T d1a7ja_ 7 ISVTGSSGAGTSTVK 21 (288)
T ss_dssp EEEESCC---CCTHH
T ss_pred EEEECCCCCcHHHHH
Confidence 668999999999653
No 211
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=65.66 E-value=24 Score=28.07 Aligned_cols=71 Identities=25% Similarity=0.341 Sum_probs=48.0
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHH--------HHH----HHhhCCCcEEEeccHHHHHHHH
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIA--------EQR----SELRGGVSIVVATPGRFLDHLQ 129 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~----~~~~~~~~Ivv~T~~~l~~~~~ 129 (433)
+.++||.|.++.-+..+++.+.+. ++.+..+.|..... ... ....+..+|+|+| +...
T Consensus 161 ~~k~iiF~~~~~~~~~~~~~L~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g~~~vLv~T-----~~~~ 230 (286)
T d1wp9a2 161 NSKIIVFTNYRETAKKIVNELVKD-----GIKAKRFVGQASKENDRGLSQREQKLILDEFARGEFNVLVAT-----SVGE 230 (286)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHHT-----TCCEEEECCSSCC-------CCHHHHHHHHHHHTSCSEEEEC-----GGGG
T ss_pred CCcEEEEeCcHHhHHHHHHHHHHc-----CCceEEeeccccccccchhchHHHHHHHHHHHcCCCcEEEEc-----ccee
Confidence 678999999999999888887763 56777776643321 111 1223578999999 4433
Q ss_pred cCCCCCCCccEEEE
Q 013962 130 QGNTSLSRVSFVIL 143 (433)
Q Consensus 130 ~~~~~~~~~~~vIi 143 (433)
. ..++...++||.
T Consensus 231 ~-Gld~~~~~~Vi~ 243 (286)
T d1wp9a2 231 E-GLDVPEVDLVVF 243 (286)
T ss_dssp G-GGGSTTCCEEEE
T ss_pred c-cccCCCCCEEEE
Confidence 3 456777888886
No 212
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=65.60 E-value=3 Score=34.77 Aligned_cols=24 Identities=21% Similarity=0.202 Sum_probs=17.3
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
+-|.+++|+|||. .+-.+...+..
T Consensus 57 IgitG~pGaGKST-Li~~l~~~~~~ 80 (327)
T d2p67a1 57 LGVTGTPGAGKST-FLEAFGMLLIR 80 (327)
T ss_dssp EEEEECTTSCHHH-HHHHHHHHHHH
T ss_pred EEeeCCCCCCHHH-HHHHHHHHHHh
Confidence 6778999999995 44555555554
No 213
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=65.49 E-value=2.3 Score=33.21 Aligned_cols=32 Identities=25% Similarity=0.264 Sum_probs=20.6
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcC
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAP 70 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P 70 (433)
.++.|.-|||||. ++. .++... ++.++.||+.
T Consensus 6 ~iitGFLGaGKTT-ll~----~lL~~~-----~~~riaVI~N 37 (222)
T d1nija1 6 TLLTGFLGAGKTT-LLR----HILNEQ-----HGYKIAVIEN 37 (222)
T ss_dssp EEEEESSSSSCHH-HHH----HHHHSC-----CCCCEEEECS
T ss_pred EEEeeCCCCCHHH-HHH----HHHhcC-----CCCcEEEEEe
Confidence 5889999999995 333 333321 2556777764
No 214
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=65.18 E-value=1.4 Score=34.93 Aligned_cols=25 Identities=32% Similarity=0.424 Sum_probs=18.4
Q ss_pred cCCcEEEEcCCCChHHHHHHHHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
.|+-+-+.+|.|+|||.. +-++.-+
T Consensus 31 ~Ge~~~liGpsGaGKSTL--l~~i~Gl 55 (239)
T d1v43a3 31 DGEFLVLLGPSGCGKTTT--LRMIAGL 55 (239)
T ss_dssp TTCEEEEECCTTSSHHHH--HHHHHTS
T ss_pred CCCEEEEECCCCChHHHH--HHHHHcC
Confidence 566789999999999963 4444443
No 215
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=63.95 E-value=5.3 Score=32.15 Aligned_cols=21 Identities=24% Similarity=0.227 Sum_probs=17.7
Q ss_pred cCCcEEEEcCCCChHHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFTI 45 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~~ 45 (433)
.|+...+.++.|+|||..+..
T Consensus 67 kGQr~~If~~~g~GKt~l~~~ 87 (276)
T d2jdid3 67 KGGKIGLFGGAGVGKTVLIME 87 (276)
T ss_dssp TTCEEEEEECTTSSHHHHHHH
T ss_pred CCCEEEeeCCCCCCHHHHHHH
Confidence 688999999999999975443
No 216
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=63.87 E-value=1.4 Score=34.96 Aligned_cols=18 Identities=28% Similarity=0.396 Sum_probs=15.3
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|+-+-+.+|.|+|||..
T Consensus 31 ~Gei~~liGpnGaGKSTl 48 (240)
T d1ji0a_ 31 RGQIVTLIGANGAGKTTT 48 (240)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 567789999999999963
No 217
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.98 E-value=4.3 Score=31.19 Aligned_cols=25 Identities=12% Similarity=0.076 Sum_probs=16.7
Q ss_pred cEEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 28 DLLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
=+.+.|+-|+|||..+ -.+.+.+..
T Consensus 5 lI~ieG~dGsGKsT~~-~~L~~~L~~ 29 (209)
T d1nn5a_ 5 LIVLEGVDRAGKSTQS-RKLVEALCA 29 (209)
T ss_dssp EEEEEESTTSSHHHHH-HHHHHHHHH
T ss_pred EEEEECCCCCCHHHHH-HHHHHHHHH
Confidence 3566799999999753 344455444
No 218
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.85 E-value=9.2 Score=29.13 Aligned_cols=74 Identities=15% Similarity=0.219 Sum_probs=48.4
Q ss_pred CCCeEEEEEeccccHHHHHHHHHHCC-----CceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecc-----cc-cCcccC
Q 013962 241 PFPLTIVFVERKTRCDEVSEALVAEG-----LHAVALHGGRNQSDRESALRDFRNGSTNILVATDV-----AS-RGLDVM 309 (433)
Q Consensus 241 ~~~~~lvf~~~~~~~~~l~~~L~~~~-----~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~-----~~-~Gidip 309 (433)
....++|.+++++.+..+.+.+.... +.+....|+.+....... +.+...+|+|+|+- +. ..+++.
T Consensus 68 ~~~~~lil~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---l~~~~~~ilI~TP~rl~~~~~~~~~~l~ 144 (207)
T d1t6na_ 68 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEV---LKKNCPHIVVGTPGRILALARNKSLNLK 144 (207)
T ss_dssp TCCCEEEECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHH---HHHSCCSEEEECHHHHHHHHHTTSSCCT
T ss_pred CCceEEEEeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHH---HHhcCCCEEEeCcchhhhhccCCceecc
Confidence 34569999999999988888886542 346677777766554433 33456789999952 11 244555
Q ss_pred CCcEEEEc
Q 013962 310 GVAHVVNL 317 (433)
Q Consensus 310 ~~~~Vi~~ 317 (433)
++.++|.-
T Consensus 145 ~l~~lVlD 152 (207)
T d1t6na_ 145 HIKHFILD 152 (207)
T ss_dssp TCCEEEEE
T ss_pred ccceeehh
Confidence 66665543
No 219
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=62.74 E-value=4.2 Score=30.95 Aligned_cols=24 Identities=17% Similarity=0.072 Sum_probs=15.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
+.+.|.-|||||... -.+.+.+..
T Consensus 3 I~ieG~dGsGKST~~-~~L~~~l~~ 26 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLV-EKLSGAFRA 26 (208)
T ss_dssp EEEECSTTSSHHHHH-HHHHHHHHH
T ss_pred EEEECCCCCCHHHHH-HHHHHHHHH
Confidence 567899999999643 334444433
No 220
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=62.29 E-value=1.6 Score=33.11 Aligned_cols=14 Identities=29% Similarity=0.238 Sum_probs=11.5
Q ss_pred EEEcCCCChHHHHH
Q 013962 30 LGCAETGSGKTAAF 43 (433)
Q Consensus 30 l~~~~TGsGKT~~~ 43 (433)
-|.|+.|||||.++
T Consensus 7 gitG~~gSGKstva 20 (191)
T d1uf9a_ 7 GITGNIGSGKSTVA 20 (191)
T ss_dssp EEEECTTSCHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 36799999999754
No 221
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=62.21 E-value=0.9 Score=34.84 Aligned_cols=22 Identities=14% Similarity=0.261 Sum_probs=15.5
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHh
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCV 52 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~ 52 (433)
.+|.|++|+|||.+ +-++..++
T Consensus 27 tvi~G~NGsGKSti--l~Ai~~~L 48 (222)
T d1qhla_ 27 TTLSGGNGAGKSTT--MAAFVTAL 48 (222)
T ss_dssp HHHHSCCSHHHHHH--HHHHHHHH
T ss_pred EEEECCCCCCHHHH--HHHHHHHh
Confidence 57889999999964 33444443
No 222
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=61.80 E-value=1.6 Score=34.68 Aligned_cols=18 Identities=28% Similarity=0.353 Sum_probs=15.5
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|..+.+.+|.|+|||..
T Consensus 30 ~Ge~~~iiG~sGsGKSTl 47 (242)
T d1oxxk2 30 NGERFGILGPSGAGKTTF 47 (242)
T ss_dssp TTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 567799999999999963
No 223
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=61.52 E-value=3.4 Score=38.62 Aligned_cols=38 Identities=32% Similarity=0.333 Sum_probs=26.2
Q ss_pred HHHHHHHHhh---cCCcEEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 15 IQAQAMPVAL---SGRDLLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 15 ~Q~~~i~~~~---~~~~~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
.=..|+..+. .++.+++.|.+|||||.+. -.++.++..
T Consensus 111 iA~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~-k~il~yL~~ 151 (712)
T d1d0xa2 111 ISDVAYRSMLDDRQNQSLLITGESGAGKTENT-KKVIQYLAS 151 (712)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEEEeCCCCCCHHHHH-HHHHHHHHH
Confidence 3445666665 3457999999999999764 555665544
No 224
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=61.32 E-value=3.3 Score=38.52 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=26.6
Q ss_pred HHHHHHHHHhh---cCCcEEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 14 SIQAQAMPVAL---SGRDLLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 14 ~~Q~~~i~~~~---~~~~~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
..=..|+..+. ..+.+++.|.+|||||.++ --++.++..
T Consensus 71 ~iA~~Ay~~l~~~~~~QsIiisGeSGsGKTe~~-k~il~yL~~ 112 (684)
T d1lkxa_ 71 ALANDAYRSMRQSQENQCVIISGESGAGKTEAS-KKIMQFLTF 112 (684)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECSTTSSHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEEcCCCCCHHHHH-HHHHHHHHH
Confidence 33446666665 2456999999999999764 556666543
No 225
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=61.14 E-value=3.2 Score=38.83 Aligned_cols=40 Identities=28% Similarity=0.297 Sum_probs=27.6
Q ss_pred CcHHHHHHHHHhhc---CCcEEEEcCCCChHHHHHHHHHHHHHh
Q 013962 12 PTSIQAQAMPVALS---GRDLLGCAETGSGKTAAFTIPMIQHCV 52 (433)
Q Consensus 12 ~~~~Q~~~i~~~~~---~~~~l~~~~TGsGKT~~~~~~~~~~~~ 52 (433)
++..=..|+..+.. .+.+|+.|.+|||||.+. --++.++.
T Consensus 74 if~vA~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~-k~il~yL~ 116 (710)
T d1br2a2 74 IYAIADTAYRSMLQDREDQSILCTGESGAGKTENT-KKVIQYLA 116 (710)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHH-HHHHHHHH
Confidence 34445566666663 456999999999999764 55666654
No 226
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=61.13 E-value=4.1 Score=31.72 Aligned_cols=31 Identities=19% Similarity=0.249 Sum_probs=20.6
Q ss_pred EEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEE
Q 013962 30 LGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 68 (433)
Q Consensus 30 l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl 68 (433)
+..+.-|.|||.++...+.... +. |.+|+++
T Consensus 7 v~~~kGGvGKTtia~nLA~~la-~~-------g~~Vlli 37 (237)
T d1g3qa_ 7 IVSGKGGTGKTTVTANLSVALG-DR-------GRKVLAV 37 (237)
T ss_dssp EECSSTTSSHHHHHHHHHHHHH-HT-------TCCEEEE
T ss_pred EECCCCCCcHHHHHHHHHHHHH-hC-------CCCEEEE
Confidence 4557789999988765444433 32 6677777
No 227
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=60.92 E-value=5.8 Score=31.15 Aligned_cols=73 Identities=12% Similarity=0.128 Sum_probs=49.5
Q ss_pred CCCeEEEEEeccccHHHHHHHHHHC----CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecc-c-----ccCcccCC
Q 013962 241 PFPLTIVFVERKTRCDEVSEALVAE----GLHAVALHGGRNQSDRESALRDFRNGSTNILVATDV-A-----SRGLDVMG 310 (433)
Q Consensus 241 ~~~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~-~-----~~Gidip~ 310 (433)
....++|.+++++.+..+.+.+... ++.+..+.|+....+.... .....+|+|+|+- + ...+++.+
T Consensus 97 ~~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~ivV~TP~~l~~~~~~~~~~l~~ 172 (238)
T d1wrba1 97 AYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIRE----VQMGCHLLVATPGRLVDFIEKNKISLEF 172 (238)
T ss_dssp BCCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHHH----HSSCCSEEEECHHHHHHHHHTTSBCCTT
T ss_pred CCceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHhh----cccCCceeecCHHHHHhHHccCceeccc
Confidence 4466999999999998888776543 6677778777665554332 3346789999952 1 23556667
Q ss_pred CcEEEEc
Q 013962 311 VAHVVNL 317 (433)
Q Consensus 311 ~~~Vi~~ 317 (433)
+.++|.-
T Consensus 173 v~~lViD 179 (238)
T d1wrba1 173 CKYIVLD 179 (238)
T ss_dssp CCEEEEE
T ss_pred cceeeee
Confidence 7776643
No 228
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=59.88 E-value=4.1 Score=31.20 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=17.9
Q ss_pred CCcEEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 26 GRDLLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
|+=+++.|+-|||||..+ -.+.+.+..
T Consensus 2 gkfIviEG~dGsGKsT~~-~~L~~~L~~ 28 (210)
T d4tmka_ 2 SKYIVIEGLEGAGKTTAR-NVVVETLEQ 28 (210)
T ss_dssp CCEEEEEECTTSCHHHHH-HHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHH-HHHHHHHHh
Confidence 344678899999999653 334444444
No 229
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=59.83 E-value=2 Score=34.55 Aligned_cols=18 Identities=28% Similarity=0.375 Sum_probs=15.3
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|.-+-+.+|.|+|||..
T Consensus 27 ~GEi~~iiG~sGsGKSTL 44 (258)
T d1b0ua_ 27 AGDVISIIGSSGSGKSTF 44 (258)
T ss_dssp TTCEEEEECCTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 567789999999999963
No 230
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=59.62 E-value=2 Score=33.11 Aligned_cols=15 Identities=27% Similarity=0.297 Sum_probs=12.3
Q ss_pred EEEEcCCCChHHHHH
Q 013962 29 LLGCAETGSGKTAAF 43 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~ 43 (433)
+-|.|+.|||||.++
T Consensus 6 IgitG~igSGKStv~ 20 (208)
T d1vhta_ 6 VALTGGIGSGKSTVA 20 (208)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCcCCHHHHH
Confidence 347999999999754
No 231
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=59.53 E-value=3.5 Score=39.15 Aligned_cols=40 Identities=30% Similarity=0.350 Sum_probs=27.4
Q ss_pred cHHHHHHHHHhhc---CCcEEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 13 TSIQAQAMPVALS---GRDLLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 13 ~~~Q~~~i~~~~~---~~~~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
+..=..|+..+.. ++.+|+.|.+|||||.+. --++.++..
T Consensus 107 faiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~-K~il~yL~~ 149 (794)
T d2mysa2 107 FSISDNAYQFMLTDRENQSILITGESGAGKTVNT-KRVIQYFAT 149 (794)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEcCCCCCHHHHH-HHHHHHHHH
Confidence 3444566666662 346999999999999764 556666544
No 232
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=59.42 E-value=1.5 Score=34.71 Aligned_cols=18 Identities=28% Similarity=0.388 Sum_probs=15.4
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|+-+-+.+|.|+|||..
T Consensus 24 ~Gei~~iiG~nGaGKSTL 41 (231)
T d1l7vc_ 24 AGEILHLVGPNGAGKSTL 41 (231)
T ss_dssp TTCEEECBCCTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 567789999999999963
No 233
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=58.73 E-value=4 Score=38.34 Aligned_cols=41 Identities=15% Similarity=0.197 Sum_probs=27.8
Q ss_pred CcHHHHHHHHHhhc---CCcEEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 12 PTSIQAQAMPVALS---GRDLLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 12 ~~~~Q~~~i~~~~~---~~~~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
++..=..|+..+.. ++.+++.|.+|||||.+. -.++.++..
T Consensus 77 if~vA~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~-k~il~~l~~ 120 (730)
T d1w7ja2 77 IFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSA-KYAMRYFAT 120 (730)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHH-HHHHHHHHH
Confidence 33445566666653 456999999999999864 456666543
No 234
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=58.70 E-value=8.7 Score=31.03 Aligned_cols=31 Identities=23% Similarity=0.255 Sum_probs=22.0
Q ss_pred HHHHHhh---cCCcEEEEcCCCChHHHHHHHHHH
Q 013962 18 QAMPVAL---SGRDLLGCAETGSGKTAAFTIPMI 48 (433)
Q Consensus 18 ~~i~~~~---~~~~~l~~~~TGsGKT~~~~~~~~ 48 (433)
.+++.+. .|+...+.++.|.|||......+.
T Consensus 57 raID~l~pig~GQr~~If~~~g~GKt~ll~~~~~ 90 (285)
T d2jdia3 57 KAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTII 90 (285)
T ss_dssp HHHHHHSCCBTTCBCEEEESTTSSHHHHHHHHHH
T ss_pred eEEecccCccCCCEEEeecCCCCChHHHHHHHHH
Confidence 3444444 688999999999999975443333
No 235
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=57.74 E-value=2.3 Score=32.61 Aligned_cols=15 Identities=40% Similarity=0.348 Sum_probs=13.6
Q ss_pred CcEEEEcCCCChHHH
Q 013962 27 RDLLGCAETGSGKTA 41 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~ 41 (433)
+++++.|++|+|||.
T Consensus 1 k~V~ivG~~~~GKTs 15 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTL 15 (207)
T ss_dssp CEEEEECSTTSSHHH
T ss_pred CEEEEECCCCCCHHH
Confidence 478999999999996
No 236
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=57.72 E-value=2.3 Score=32.74 Aligned_cols=14 Identities=36% Similarity=0.202 Sum_probs=11.7
Q ss_pred EEEcCCCChHHHHH
Q 013962 30 LGCAETGSGKTAAF 43 (433)
Q Consensus 30 l~~~~TGsGKT~~~ 43 (433)
-|.|+.|||||.++
T Consensus 6 gITG~igSGKStv~ 19 (205)
T d1jjva_ 6 GLTGGIGSGKTTIA 19 (205)
T ss_dssp EEECSTTSCHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 47999999999753
No 237
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=57.45 E-value=34 Score=26.41 Aligned_cols=92 Identities=15% Similarity=0.175 Sum_probs=52.8
Q ss_pred CCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHhh---
Q 013962 35 TGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELR--- 111 (433)
Q Consensus 35 TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 111 (433)
..|||.. ++.-++..+... +.++||.+....-.+-....+.... +..+..+.|+.+.......+.
T Consensus 66 ~~S~K~~-~l~~~l~~~~~~-------g~kviIFs~~~~~~~~l~~~l~~~~----~~~~~~i~G~~~~~~R~~~i~~F~ 133 (244)
T d1z5za1 66 RRSGKMI-RTMEIIEEALDE-------GDKIAIFTQFVDMGKIIRNIIEKEL----NTEVPFLYGELSKKERDDIISKFQ 133 (244)
T ss_dssp TTCHHHH-HHHHHHHHHHHT-------TCCEEEEESCHHHHHHHHHHHHHHH----CSCCCEECTTSCHHHHHHHHHHHH
T ss_pred hhhhHHH-HHHHHHHhhccc-------ccceEEEeeceehHHHHHHHHHhhc----cceEEEEecccchhccchhhhhhh
Confidence 3466664 334444443332 7789999988876664444454432 466677889887665544331
Q ss_pred --CCCcEEEeccHHHHHHHHcCCCCCCCccEEEE
Q 013962 112 --GGVSIVVATPGRFLDHLQQGNTSLSRVSFVIL 143 (433)
Q Consensus 112 --~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIi 143 (433)
.+..++++++... .....+.....+|+
T Consensus 134 ~~~~~~vll~~~~~~-----g~Glnl~~a~~vi~ 162 (244)
T d1z5za1 134 NNPSVKFIVLSVKAG-----GFGINLTSANRVIH 162 (244)
T ss_dssp HCTTCCEEEEECCTT-----CCCCCCTTCSEEEE
T ss_pred ccccchhcccccccc-----ccccccchhhhhhh
Confidence 2467787776442 12344555555554
No 238
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=57.16 E-value=1.8 Score=36.11 Aligned_cols=15 Identities=27% Similarity=0.191 Sum_probs=13.0
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
-.++.|++|||||.+
T Consensus 28 lnvi~G~NGsGKS~i 42 (329)
T g1xew.1 28 FTAIVGANGSGKSNI 42 (329)
T ss_dssp EEEEEECTTSSSHHH
T ss_pred eEEEECCCCCCHHHH
Confidence 468999999999974
No 239
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=56.20 E-value=2.6 Score=33.30 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=15.5
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
.-+.+.+|.|+|||.. +-++.-+
T Consensus 25 e~~~liGpnGaGKSTl--l~~i~Gl 47 (240)
T d2onka1 25 DYCVLLGPTGAGKSVF--LELIAGI 47 (240)
T ss_dssp SEEEEECCTTSSHHHH--HHHHHTS
T ss_pred EEEEEECCCCChHHHH--HHHHHcC
Confidence 3456789999999963 4444443
No 240
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=55.82 E-value=3.7 Score=31.97 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhcCCcEEEEcCCCChHHH
Q 013962 14 SIQAQAMPVALSGRDLLGCAETGSGKTA 41 (433)
Q Consensus 14 ~~Q~~~i~~~~~~~~~l~~~~TGsGKT~ 41 (433)
....+.+...+.++..++.|++|.|||.
T Consensus 83 ~~g~~~L~~~l~~kt~~~~G~SGVGKST 110 (225)
T d1u0la2 83 GMGIEELKEYLKGKISTMAGLSGVGKSS 110 (225)
T ss_dssp CTTHHHHHHHHSSSEEEEECSTTSSHHH
T ss_pred chhHhhHHHHhcCCeEEEECCCCCCHHH
Confidence 3445666777788889999999999995
No 241
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=55.01 E-value=4.3 Score=38.48 Aligned_cols=40 Identities=23% Similarity=0.223 Sum_probs=27.0
Q ss_pred cHHHHHHHHHhhc---CCcEEEEcCCCChHHHHHHHHHHHHHhh
Q 013962 13 TSIQAQAMPVALS---GRDLLGCAETGSGKTAAFTIPMIQHCVA 53 (433)
Q Consensus 13 ~~~Q~~~i~~~~~---~~~~l~~~~TGsGKT~~~~~~~~~~~~~ 53 (433)
+..=..|+..+.. ++.+++.|..|||||.+. --++.++..
T Consensus 105 yavA~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~-K~il~yL~~ 147 (789)
T d1kk8a2 105 FSVADNAYQNMVTDRENQSCLITGESGAGKTENT-KKVIMYLAK 147 (789)
T ss_dssp HHHHHHHHHHHHHHTSEEEEEEECSTTSSHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEeCCCCCHHHHH-HHHHHHHHH
Confidence 3344566666652 356999999999999764 555665553
No 242
>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=54.96 E-value=3.8 Score=28.11 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=31.5
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHCCC-ceeeecCCCC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAEGL-HAVALHGGRN 277 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~ 277 (433)
.+..++++||.+-..+...+..|...|+ ++..+.|++.
T Consensus 70 ~~~~~iv~~C~~G~rs~~a~~~L~~~G~~nv~~l~GG~~ 108 (119)
T d1tq1a_ 70 GQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYS 108 (119)
T ss_dssp CTTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHH
T ss_pred CCCcEEEEEcCCcCcHHHHHHHHHhcccCCeEEecChHH
Confidence 3456799999998888999999999988 5888888863
No 243
>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}
Probab=54.63 E-value=4.8 Score=28.44 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=31.2
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHCCC-ceeeecCCC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAEGL-HAVALHGGR 276 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 276 (433)
.+..++++||.+-..+..++..|...|+ .+..+.|++
T Consensus 80 ~~~~~ivvyC~~G~rs~~aa~~L~~~G~~nV~~l~GG~ 117 (137)
T d1qxna_ 80 DPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGM 117 (137)
T ss_dssp CTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCH
T ss_pred CcccceeeeecccchHHHHHHHHHHcCCCcEEEecCHH
Confidence 3456799999998899999999999998 577788884
No 244
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.59 E-value=11 Score=28.60 Aligned_cols=73 Identities=22% Similarity=0.219 Sum_probs=47.1
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHC-----CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecc------cccCccc
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAE-----GLHAVALHGGRNQSDRESALRDFRNGSTNILVATDV------ASRGLDV 308 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~------~~~Gidi 308 (433)
..+..++|.+++++.+..+.+.+... +..+....|+....+....+ ....+++|+|+- -...+++
T Consensus 69 ~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l----~~~~~ivv~TPgrl~~~~~~~~~~~ 144 (206)
T d1veca_ 69 KDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRL----DDTVHVVIATPGRILDLIKKGVAKV 144 (206)
T ss_dssp SCSCCEEEECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHT----TSCCSEEEECHHHHHHHHHTTCSCC
T ss_pred ccCcceEEEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHH----HhccCeEEeCCccccccccchhccc
Confidence 34456999999999999888877643 34566667776655544433 356789999942 1123445
Q ss_pred CCCcEEEE
Q 013962 309 MGVAHVVN 316 (433)
Q Consensus 309 p~~~~Vi~ 316 (433)
.+++++|.
T Consensus 145 ~~l~~lVl 152 (206)
T d1veca_ 145 DHVQMIVL 152 (206)
T ss_dssp TTCCEEEE
T ss_pred cccceEEE
Confidence 55666554
No 245
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=54.35 E-value=8.1 Score=28.98 Aligned_cols=70 Identities=19% Similarity=0.204 Sum_probs=48.8
Q ss_pred CeEEEEEeccccHHHHHHHHHHC----CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEeccc------ccCcccCCCc
Q 013962 243 PLTIVFVERKTRCDEVSEALVAE----GLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVA------SRGLDVMGVA 312 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~~------~~Gidip~~~ 312 (433)
+++++.+|++.-++..++.+.+. +..+..++++....++...... ..++++|.-. ...+...+++
T Consensus 53 ~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~i~i~t~~~~~~~~~~~~~~~~~~~ 127 (200)
T d1wp9a1 53 GKVLMLAPTKPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWAR-----AKVIVATPQTIENDLLAGRISLEDVS 127 (200)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHBCSCGGGEEEECSCSCHHHHHHHHHH-----CSEEEECHHHHHHHHHTTSCCTTSCS
T ss_pred CcEEEEcCchHHHHHHHHHHHHhhcccccceeeeecccchhHHHHhhhc-----ccccccccchhHHHHhhhhhhccccc
Confidence 56999999999998888877764 4567888999898888876654 3588888421 1223334566
Q ss_pred EEEEc
Q 013962 313 HVVNL 317 (433)
Q Consensus 313 ~Vi~~ 317 (433)
.||.-
T Consensus 128 ~vIiD 132 (200)
T d1wp9a1 128 LIVFD 132 (200)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 66643
No 246
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=54.07 E-value=7.1 Score=30.12 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=21.0
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEE
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 68 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl 68 (433)
.+..+.=|.|||.++...+... .+. +.+++++
T Consensus 5 av~s~KGGvGKTtia~nlA~~l-a~~-------g~~Vlli 36 (232)
T d1hyqa_ 5 TVASGKGGTGKTTITANLGVAL-AQL-------GHDVTIV 36 (232)
T ss_dssp EEEESSSCSCHHHHHHHHHHHH-HHT-------TCCEEEE
T ss_pred EEECCCCCChHHHHHHHHHHHH-HhC-------CCCEEEE
Confidence 3567888999998876544433 332 6667766
No 247
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=54.06 E-value=3.5 Score=35.54 Aligned_cols=15 Identities=27% Similarity=0.138 Sum_probs=12.8
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
-.+|.||+|+|||.+
T Consensus 27 l~~i~G~NGsGKS~i 41 (427)
T d1w1wa_ 27 FTSIIGPNGSGKSNM 41 (427)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 368899999999964
No 248
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=53.81 E-value=43 Score=25.60 Aligned_cols=125 Identities=10% Similarity=0.043 Sum_probs=66.9
Q ss_pred CcHHHHHHHHHhh--cCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccC
Q 013962 12 PTSIQAQAMPVAL--SGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSL 89 (433)
Q Consensus 12 ~~~~Q~~~i~~~~--~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~ 89 (433)
..|.|-+.+..+. .+-..++...|+.|-|..++ +..+-. +.+++-+-.....+.-..+.+.+.. .
T Consensus 43 ~~~~~g~~L~~L~~~~~~k~iLEiGT~~GyStl~l---a~al~~--------~g~v~tie~~~~~~~~A~~~~~~~g-~- 109 (227)
T d1susa1 43 TSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLAT---ALAIPE--------DGKILAMDINKENYELGLPVIKKAG-V- 109 (227)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCGGGHHHHHH---HHHSCT--------TCEEEEEESCCHHHHHHHHHHHHTT-C-
T ss_pred cCHHHHHHHHHHHHhcCCCcEEEecchhhhhHHHH---HhhCCC--------CcEEEEEeccchhHHHHHHHHHHhc-c-
Confidence 4566666666665 33458999999999997543 333211 4566665555544432222233211 0
Q ss_pred CCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccchhccCCCHHHHHHHHhhCCCCC
Q 013962 90 DSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEADRMLDMGFEPQIREVMQNLPDKH 169 (433)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~ 169 (433)
.-+ ..++.+.....+..+.........+++|++|=.|.. +...+..+...++++.
T Consensus 110 -~~~--------------------i~~~~g~a~~~L~~l~~~~~~~~~fD~iFiDa~k~~----y~~~~e~~~~ll~~gG 164 (227)
T d1susa1 110 -DHK--------------------IDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDN----YLNYHKRLIDLVKVGG 164 (227)
T ss_dssp -GGG--------------------EEEEESCHHHHHHHHHHCGGGTTCBSEEEECSCSTT----HHHHHHHHHHHBCTTC
T ss_pred -ccc--------------------eeeeehHHHHHHHHHHhccccCCceeEEEeccchhh----hHHHHHHHHhhcCCCc
Confidence 111 234445544444444333323456999999955532 4456666666676554
Q ss_pred cEEEEE
Q 013962 170 QTLLFS 175 (433)
Q Consensus 170 ~~i~~S 175 (433)
++.+-
T Consensus 165 -iii~D 169 (227)
T d1susa1 165 -VIGYD 169 (227)
T ss_dssp -CEEEE
T ss_pred -EEEEc
Confidence 34443
No 249
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=53.67 E-value=20 Score=26.84 Aligned_cols=58 Identities=19% Similarity=0.290 Sum_probs=51.1
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEec
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATD 300 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~ 300 (433)
.++++.++++..+....+.|+..+.......+.....+..........+...++++|.
T Consensus 66 ~~~~~v~P~~~L~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~ 123 (206)
T d1oywa2 66 GLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAP 123 (206)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHTCCSEEEECH
T ss_pred CceEEeccchhhhhhHHHHHHhhcccccccccccccccchhHHHHHhcCCceEEEEec
Confidence 5699999999999999999999988888888888888888888888889999999884
No 250
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=53.26 E-value=20 Score=29.16 Aligned_cols=60 Identities=7% Similarity=0.056 Sum_probs=38.0
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECC---------CCHHH-------HHHHhhCCCcEEEeccHHHH
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGG---------TNIAE-------QRSELRGGVSIVVATPGRFL 125 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-------~~~~~~~~~~Ivv~T~~~l~ 125 (433)
...+|+|+|+...+.++++.++.+.. -.+..+-.. .+... ......++..|+|+|...+.
T Consensus 14 ~~p~lvv~~~~~~A~~l~~~L~~~~~----~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~~iiits~~al~ 89 (308)
T d2b2na1 14 AGPVVLIAPDMQNALRLHDEISQFTD----QMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLM 89 (308)
T ss_dssp SSCEEEEESSHHHHHHHHHHHHTTCS----SCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCSSEEEEEHHHHT
T ss_pred CCCEEEEcCCHHHHHHHHHHHHhcCC----CceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCCceEEeechhhh
Confidence 56689999999999999999987642 223222211 11111 11223456789999988775
No 251
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=53.04 E-value=2.8 Score=33.49 Aligned_cols=18 Identities=33% Similarity=0.383 Sum_probs=15.1
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|.-+-+.+|.|+|||..
T Consensus 29 ~Gei~~liG~nGaGKSTL 46 (254)
T d1g6ha_ 29 KGDVTLIIGPNGSGKSTL 46 (254)
T ss_dssp TTCEEEEECSTTSSHHHH
T ss_pred CCCEEEEECCCCCcHHHH
Confidence 466788999999999963
No 252
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=52.83 E-value=6.9 Score=31.62 Aligned_cols=32 Identities=13% Similarity=0.119 Sum_probs=20.9
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEE
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 68 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl 68 (433)
+.+.+.=|.|||.++...+...... |.+||+|
T Consensus 5 IaisgKGGVGKTT~a~NLA~~LA~~--------G~rVLlI 36 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVAALAEM--------GKKVMIV 36 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHT--------TCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHC--------CCCEEEE
Confidence 4456788999998876544443322 6676655
No 253
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=52.26 E-value=4.2 Score=32.77 Aligned_cols=15 Identities=33% Similarity=0.319 Sum_probs=12.9
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
-.++.|+.|+|||.+
T Consensus 25 ln~IvG~NGsGKSti 39 (292)
T g1f2t.1 25 INLIIGQNGSGKSSL 39 (292)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred eEEEECCCCCCHHHH
Confidence 358999999999974
No 254
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=52.05 E-value=3.2 Score=32.79 Aligned_cols=18 Identities=28% Similarity=0.320 Sum_probs=14.7
Q ss_pred cCCcEEEEcCCCChHHHH
Q 013962 25 SGRDLLGCAETGSGKTAA 42 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~ 42 (433)
.|.-+-+.+|.|+|||..
T Consensus 27 ~Gei~glvG~nGaGKSTL 44 (238)
T d1vpla_ 27 EGEIFGLIGPNGAGKTTT 44 (238)
T ss_dssp TTCEEEEECCTTSSHHHH
T ss_pred CCCEEEEECCCCCCHHHH
Confidence 456677999999999963
No 255
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=51.83 E-value=7 Score=31.13 Aligned_cols=32 Identities=16% Similarity=0.116 Sum_probs=20.7
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEE
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVL 68 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl 68 (433)
+.+.+.=|.|||.++...+...... |.+|+++
T Consensus 4 Iai~gKGGvGKTT~a~nLA~~LA~~--------G~rVllI 35 (269)
T d1cp2a_ 4 VAIYGKGGIGKSTTTQNLTSGLHAM--------GKTIMVV 35 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTT--------TCCEEEE
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhC--------CCcEEEE
Confidence 3456788999998876555444322 6666655
No 256
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.51 E-value=12 Score=28.55 Aligned_cols=74 Identities=14% Similarity=0.189 Sum_probs=44.2
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHC----CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecc------cccCcccC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAE----GLHAVALHGGRNQSDRESALRDFRNGSTNILVATDV------ASRGLDVM 309 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~------~~~Gidip 309 (433)
..+..++|++++++.+..+...+... .......+++.+..++...+ ...+|+|+|+- -..++++.
T Consensus 76 ~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~IvI~TP~~l~~~~~~~~~~l~ 150 (212)
T d1qdea_ 76 VKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-----RDAQIVVGTPGRVFDNIQRRRFRTD 150 (212)
T ss_dssp CCSCCEEEECSSHHHHHHHHHHHHHHTTTSCCCEEEECC----------C-----TTCSEEEECHHHHHHHHHTTSSCCT
T ss_pred CCCcceEEEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHHh-----cCCcEEEECCCccccccccCceecC
Confidence 34567999999999998888887654 33445555544433332221 24679999942 23466777
Q ss_pred CCcEEEEcc
Q 013962 310 GVAHVVNLD 318 (433)
Q Consensus 310 ~~~~Vi~~~ 318 (433)
+++++|.-+
T Consensus 151 ~l~~lVlDE 159 (212)
T d1qdea_ 151 KIKMFILDE 159 (212)
T ss_dssp TCCEEEEET
T ss_pred cceEEeehh
Confidence 888877643
No 257
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=51.35 E-value=10 Score=30.62 Aligned_cols=37 Identities=14% Similarity=0.330 Sum_probs=31.4
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCH
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNI 103 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (433)
+.++||.|+++.-+++++..+++. ++++..++++.+.
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~~~-----Gi~a~~~Hgglsq 72 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLVAL-----GINAVAYYRGLDV 72 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHT-----TCCEEEECTTSCG
T ss_pred CCCEEEECCcHHHHHHHHHHHHHC-----CCCEEEEeCCchH
Confidence 778999999999999999988874 6788888887664
No 258
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=49.51 E-value=5.5 Score=29.17 Aligned_cols=13 Identities=38% Similarity=0.613 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 7 i~lvG~~~vGKTs 19 (169)
T d1x1ra1 7 LVVVGDGGVGKSA 19 (169)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7889999999995
No 259
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.00 E-value=3.7 Score=32.08 Aligned_cols=16 Identities=13% Similarity=0.177 Sum_probs=13.5
Q ss_pred CcEEEEcCCCChHHHH
Q 013962 27 RDLLGCAETGSGKTAA 42 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~ 42 (433)
+-+.+.|+-|||||..
T Consensus 3 k~I~ieG~dGsGKST~ 18 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTF 18 (241)
T ss_dssp EEEEEECSTTSSHHHH
T ss_pred CEEEEECCCCCCHHHH
Confidence 4578999999999974
No 260
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.80 E-value=5.7 Score=28.78 Aligned_cols=13 Identities=23% Similarity=0.465 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 5 v~liG~~~vGKTs 17 (165)
T d1z06a1 5 IIVIGDSNVGKTC 17 (165)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 261
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=48.73 E-value=10 Score=30.61 Aligned_cols=55 Identities=15% Similarity=0.041 Sum_probs=41.7
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEecc
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATP 121 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~ 121 (433)
+.++++.||++.-+..+++.+.+. +..+..++++...........+..+++++|.
T Consensus 178 ~~~~lvf~~~~~~~~~l~~~L~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~lvaT~ 232 (305)
T d2bmfa2 178 KGKTVWFVPSIKAGNDIAACLRKN-----GKKVIQLSRKTFDSEYIKTRTNDWDFVVTTD 232 (305)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHH-----TCCCEECCTTCHHHHGGGGGTSCCSEEEECG
T ss_pred CCCEEEEeccHHHHHHHHHHHHhC-----CCCEEEeCCcChHHHHhhhhccchhhhhhhH
Confidence 567999999999999998888875 4566677777655444444556789999993
No 262
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.51 E-value=5.8 Score=28.86 Aligned_cols=14 Identities=29% Similarity=0.435 Sum_probs=12.5
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 5 Ki~lvG~~~vGKTs 18 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSA 18 (167)
T ss_dssp EEEEECCTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 37899999999995
No 263
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=47.51 E-value=6.6 Score=29.84 Aligned_cols=24 Identities=21% Similarity=0.304 Sum_probs=17.4
Q ss_pred CcEEEEcCCCChHHHHHHHHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
+.+++.||+++|||+.+ ..++..+
T Consensus 54 n~i~~~GP~~TGKS~f~-~sl~~~l 77 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFG-MSFIHFI 77 (205)
T ss_dssp SEEEEESCGGGCHHHHH-HHHHHHH
T ss_pred eEEEEECCCCccHHHHH-HHHHHHh
Confidence 45888999999999754 4455444
No 264
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=47.29 E-value=4.4 Score=29.04 Aligned_cols=13 Identities=31% Similarity=0.399 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 3 ivlvG~~~vGKSs 15 (160)
T d1r8sa_ 3 ILMVGLDAAGKTT 15 (160)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999995
No 265
>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}
Probab=47.08 E-value=12 Score=25.17 Aligned_cols=38 Identities=16% Similarity=-0.025 Sum_probs=31.2
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHCCCc-eeeecCCCC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAEGLH-AVALHGGRN 277 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 277 (433)
.+..++++||.+-..+....-.|+..|++ +..|.|++.
T Consensus 80 ~~~~~ii~yC~sG~~A~~~~~~L~~lG~~~v~~y~Gs~~ 118 (120)
T d1urha2 80 SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWS 118 (120)
T ss_dssp CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCC
T ss_pred CccCceEEEccchhHHHHHHHHHHHcCCCCceEcCCChh
Confidence 44567999999988888889999999884 778888764
No 266
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.08 E-value=6.9 Score=28.66 Aligned_cols=13 Identities=23% Similarity=0.483 Sum_probs=12.2
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 9 I~vvG~~~vGKSS 21 (174)
T d1wmsa_ 9 VILLGDGGVGKSS 21 (174)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 8899999999995
No 267
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=46.72 E-value=5.6 Score=32.89 Aligned_cols=16 Identities=31% Similarity=0.279 Sum_probs=13.3
Q ss_pred CcEEEEcCCCChHHHH
Q 013962 27 RDLLGCAETGSGKTAA 42 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~ 42 (433)
+-.++.|+.|+|||.+
T Consensus 24 ~~~vi~G~NgsGKTti 39 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSL 39 (369)
T ss_dssp EEEEEECCTTSSHHHH
T ss_pred CeEEEECCCCCCHHHH
Confidence 3468899999999964
No 268
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=46.63 E-value=8.4 Score=28.67 Aligned_cols=48 Identities=17% Similarity=0.281 Sum_probs=29.1
Q ss_pred EEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhcc
Q 013962 29 LLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRS 88 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~ 88 (433)
++|.++..||||.-+. .+... ++++++|......-..+.+++...-..
T Consensus 2 iLVtGGarSGKS~~AE-----~l~~~-------~~~~~YiAT~~~~D~em~~RI~~Hr~r 49 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAE-----ALIGD-------APQVLYIATSQILDDEMAARIQHHKDG 49 (180)
T ss_dssp EEEEECTTSSHHHHHH-----HHHCS-------CSSEEEEECCCC------CHHHHHHHT
T ss_pred EEEECCCCccHHHHHH-----HHHhc-------CCCcEEEEccCCCCHHHHHHHHHHHhc
Confidence 5899999999996443 22221 556888888777767777777766443
No 269
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.61 E-value=6.3 Score=28.62 Aligned_cols=13 Identities=23% Similarity=0.442 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 7 ivlvG~~~vGKTs 19 (166)
T d1z0fa1 7 YIIIGDMGVGKSC 19 (166)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 270
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=46.51 E-value=20 Score=27.88 Aligned_cols=73 Identities=21% Similarity=0.313 Sum_probs=43.3
Q ss_pred CceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCC-CccE
Q 013962 62 GPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLS-RVSF 140 (433)
Q Consensus 62 ~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~-~~~~ 140 (433)
+..+||.|+++.-++.+++.+... + ++-+..............+..+|+|+|...- + +.....++. .+++
T Consensus 25 ~~~~iif~~~~~~~~~l~~~l~~~------~-hg~~~~~~R~~~~~~f~~g~~~vLVaT~a~~-~-v~~rGlDip~~v~~ 95 (248)
T d1gkub2 25 GTGGIIYARTGEEAEEIYESLKNK------F-RIGIVTATKKGDYEKFVEGEIDHLIGTAHYY-G-TLVRGLDLPERIRF 95 (248)
T ss_dssp CSCEEEEESSHHHHHHHHHTTTTS------S-CEEECTTSSSHHHHHHHHTSCSEEEEECC--------CCSCCTTTCCE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHh------c-cCCCCHHHHHHHHHHHHhCCCeEEEEecccc-c-hhhhccCccccccE
Confidence 566899999998877766655432 2 2333334444444555568899999995420 1 112345565 4888
Q ss_pred EEE
Q 013962 141 VIL 143 (433)
Q Consensus 141 vIi 143 (433)
||.
T Consensus 96 VI~ 98 (248)
T d1gkub2 96 AVF 98 (248)
T ss_dssp EEE
T ss_pred EEE
Confidence 884
No 271
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.98 E-value=6.5 Score=30.35 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=41.3
Q ss_pred CCCeEEEEEeccccHHHHHHHHHHC----CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecc-----c-ccCcccCC
Q 013962 241 PFPLTIVFVERKTRCDEVSEALVAE----GLHAVALHGGRNQSDRESALRDFRNGSTNILVATDV-----A-SRGLDVMG 310 (433)
Q Consensus 241 ~~~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~-----~-~~Gidip~ 310 (433)
...++||++|+++.+..+.+.+... +..+....++....+. ......+..+|+|+|+- + ...+++.+
T Consensus 79 ~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~IvV~TP~rl~~~l~~~~~~~~~ 155 (218)
T d2g9na1 79 KATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAE---VQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKY 155 (218)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCST---TTSSSSCCCSEEEECHHHHHHHHHTTSSCSTT
T ss_pred cCccEEEEcccchhhhhHHHHHhhhccccceeEEeeecccchhHH---HHHHhcCCCEEEEeCChhHHHHHhcCCccccc
Confidence 4566999999999998888877654 4444444443222111 11222345678888852 2 22344455
Q ss_pred CcEEEE
Q 013962 311 VAHVVN 316 (433)
Q Consensus 311 ~~~Vi~ 316 (433)
++++|.
T Consensus 156 l~~lVl 161 (218)
T d2g9na1 156 IKMFVL 161 (218)
T ss_dssp CCEEEE
T ss_pred ceEEEe
Confidence 666554
No 272
>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}
Probab=45.72 E-value=5.9 Score=26.51 Aligned_cols=38 Identities=13% Similarity=0.208 Sum_probs=31.4
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHCCCc-eeeecCCCC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAEGLH-AVALHGGRN 277 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~ 277 (433)
.+..+++++|.+-..+..++..|...|+. +..+.|++.
T Consensus 56 ~~~~~ivv~c~~g~rs~~~a~~L~~~G~~~v~~l~GG~~ 94 (108)
T d1gmxa_ 56 DFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFE 94 (108)
T ss_dssp CTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHH
T ss_pred cccCcccccCCCChHHHHHHHHHHHcCCCCEEEEcChHH
Confidence 34567999999988899999999999984 777888754
No 273
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=45.58 E-value=4.8 Score=29.22 Aligned_cols=14 Identities=36% Similarity=0.354 Sum_probs=12.6
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 4 ki~ivG~~~~GKTs 17 (165)
T d1ksha_ 4 RLLMLGLDNAGKTT 17 (165)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999995
No 274
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.75 E-value=4.8 Score=31.52 Aligned_cols=15 Identities=20% Similarity=0.091 Sum_probs=12.7
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
-+.+.|+.|||||..
T Consensus 4 ~IviEG~~GsGKST~ 18 (241)
T d2ocpa1 4 RLSIEGNIAVGKSTF 18 (241)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCCcHHHH
Confidence 367899999999974
No 275
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.52 E-value=7.5 Score=28.31 Aligned_cols=14 Identities=29% Similarity=0.427 Sum_probs=12.4
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 8 Ki~vvG~~~vGKTs 21 (170)
T d1r2qa_ 8 KLVLLGESAVGKSS 21 (170)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 37899999999995
No 276
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=43.33 E-value=4.1 Score=30.05 Aligned_cols=14 Identities=29% Similarity=0.280 Sum_probs=12.9
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|++|+|||.
T Consensus 15 kI~lvG~~~vGKTs 28 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTT 28 (186)
T ss_dssp EEEEEEETTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 58999999999996
No 277
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=43.29 E-value=25 Score=26.01 Aligned_cols=79 Identities=16% Similarity=0.157 Sum_probs=44.9
Q ss_pred hcCCcEEEEcC-CCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCC
Q 013962 24 LSGRDLLGCAE-TGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 102 (433)
Q Consensus 24 ~~~~~~l~~~~-TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (433)
++++.++|.+. -|.|+-++-. ++.. |.+++++.-+.+-..+..+.+..... ..... .+..
T Consensus 21 l~gK~vlItGasgGIG~~ia~~--la~~-----------G~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~--~d~~ 81 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAAL--LAGE-----------GAEVVLCGRKLDKAQAAADSVNKRFK----VNVTA--AETA 81 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHH--HHHT-----------TCEEEEEESSHHHHHHHHHHHHHHHT----CCCEE--EECC
T ss_pred CCCCEEEEECCCHHHHHHHHHH--HHhh-----------ccchhhcccchHHHHHHHHHHHhccc----hhhhh--hhcc
Confidence 36788888875 4567765422 2222 77888888887777777777766432 22211 1222
Q ss_pred HHHHHHHhhCCCcEEEecc
Q 013962 103 IAEQRSELRGGVSIVVATP 121 (433)
Q Consensus 103 ~~~~~~~~~~~~~Ivv~T~ 121 (433)
.........++.+|+|.+.
T Consensus 82 ~~~~~~~~~~~iDilin~A 100 (191)
T d1luaa1 82 DDASRAEAVKGAHFVFTAG 100 (191)
T ss_dssp SHHHHHHHTTTCSEEEECC
T ss_pred cHHHHHHHhcCcCeeeecC
Confidence 2222233446678888663
No 278
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=43.10 E-value=5.5 Score=29.10 Aligned_cols=13 Identities=31% Similarity=0.435 Sum_probs=12.2
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|++|+|||.
T Consensus 8 i~vvG~~~vGKTs 20 (169)
T d3raba_ 8 ILIIGNSSVGKTS 20 (169)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 8899999999995
No 279
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.07 E-value=7.7 Score=28.13 Aligned_cols=14 Identities=36% Similarity=0.487 Sum_probs=12.4
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|..|+|||.
T Consensus 5 KivvvG~~~vGKTs 18 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSA 18 (167)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 37899999999995
No 280
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=42.74 E-value=4.7 Score=32.15 Aligned_cols=14 Identities=29% Similarity=0.506 Sum_probs=12.9
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
++++.|.||+|||.
T Consensus 34 ~I~LvG~tg~GKSS 47 (257)
T d1h65a_ 34 TILVMGKGGVGKSS 47 (257)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCCcHHH
Confidence 58999999999996
No 281
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=42.54 E-value=5.8 Score=28.99 Aligned_cols=13 Identities=23% Similarity=0.350 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+.+.|++|+|||.
T Consensus 3 V~liG~~n~GKSs 15 (171)
T d1mkya1 3 VLIVGRPNVGKST 15 (171)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6889999999995
No 282
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=42.29 E-value=5.6 Score=31.11 Aligned_cols=15 Identities=20% Similarity=0.204 Sum_probs=12.7
Q ss_pred EEEEcCCCChHHHHH
Q 013962 29 LLGCAETGSGKTAAF 43 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~ 43 (433)
+-|.|+.|||||.++
T Consensus 4 IgiTG~igSGKsTva 18 (241)
T d1deka_ 4 IFLSGVKRSGKDTTA 18 (241)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 567899999999865
No 283
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.04 E-value=7.4 Score=28.74 Aligned_cols=13 Identities=31% Similarity=0.509 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 5 ivliG~~~vGKTs 17 (179)
T d1m7ba_ 5 IVVVGDSQCGKTA 17 (179)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 6899999999995
No 284
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=41.59 E-value=34 Score=27.69 Aligned_cols=85 Identities=11% Similarity=0.001 Sum_probs=53.3
Q ss_pred CeEEEEEeccccHHHHHHHHHHC-CCceeeecC-------CC-----CHHHHHHHHHHHhcCCCcEEEEec--ccccCcc
Q 013962 243 PLTIVFVERKTRCDEVSEALVAE-GLHAVALHG-------GR-----NQSDRESALRDFRNGSTNILVATD--VASRGLD 307 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~-~~~~~~~~~-------~~-----~~~~r~~~~~~f~~g~~~vlv~T~--~~~~Gid 307 (433)
+++||.|++...|+.+++.|+.. +..+..+-+ .. ...+|..++..+.+++..|+|+|- .+.....
T Consensus 15 ~p~lvv~~~~~~A~~l~~~L~~~~~~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~~iiits~~al~~~~~p 94 (308)
T d2b2na1 15 GPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQRGVLIVPVNTLMQRVCP 94 (308)
T ss_dssp SCEEEEESSHHHHHHHHHHHHTTCSSCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCSSEEEEEHHHHTBCCCC
T ss_pred CCEEEEcCCHHHHHHHHHHHHhcCCCceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCCceEEeechhhhhhccc
Confidence 56999999999999999999765 222332211 11 134678888888888888888883 2333222
Q ss_pred cCC---CcEEEEccCCCChhHHH
Q 013962 308 VMG---VAHVVNLDLPKTVEDYV 327 (433)
Q Consensus 308 ip~---~~~Vi~~~~~~s~~~~~ 327 (433)
... ....+..+...+...+.
T Consensus 95 ~~~~~~~~~~l~~g~~~~~~~l~ 117 (308)
T d2b2na1 95 HSFLHGHALVMKKGQRLSRDALR 117 (308)
T ss_dssp HHHHHHHCEEEETTCBCCHHHHH
T ss_pred HHHHHHHHHhhhhhccccHHHHH
Confidence 211 22456666666655543
No 285
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.55 E-value=6.1 Score=29.37 Aligned_cols=13 Identities=46% Similarity=0.774 Sum_probs=12.1
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|++|+|||.
T Consensus 8 i~ivG~~~vGKTs 20 (186)
T d2f7sa1 8 LLALGDSGVGKTT 20 (186)
T ss_dssp EEEESCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999996
No 286
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.90 E-value=8 Score=28.00 Aligned_cols=13 Identities=38% Similarity=0.544 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 6 i~viG~~~vGKTs 18 (166)
T d1ctqa_ 6 LVVVGAGGVGKSA 18 (166)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999995
No 287
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.89 E-value=6.1 Score=29.91 Aligned_cols=14 Identities=29% Similarity=0.432 Sum_probs=12.8
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|++|+|||.
T Consensus 5 ~V~lvG~~n~GKTS 18 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTS 18 (209)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 58999999999996
No 288
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.73 E-value=17 Score=27.70 Aligned_cols=18 Identities=28% Similarity=0.274 Sum_probs=14.2
Q ss_pred CCcEEEEcCCCChHHHHH
Q 013962 26 GRDLLGCAETGSGKTAAF 43 (433)
Q Consensus 26 ~~~~l~~~~TGsGKT~~~ 43 (433)
|+=+.+.|+-|||||..+
T Consensus 3 Gk~I~iEG~DGsGKST~~ 20 (214)
T d1tmka_ 3 GKLILIEGLDRTGKTTQC 20 (214)
T ss_dssp CCEEEEEESTTSSHHHHH
T ss_pred eEEEEEECCCCCcHHHHH
Confidence 344778999999999753
No 289
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=40.60 E-value=90 Score=25.47 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=55.2
Q ss_pred CChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHh---hC
Q 013962 36 GSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSEL---RG 112 (433)
Q Consensus 36 GsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 112 (433)
.|||.. .+.-++..+.... +.++||.+.......-+.+.+... ++....+.|+.........+ +.
T Consensus 99 ~S~Kl~-~L~~ll~~~~~~~------g~KvlIFs~~~~~ld~l~~~l~~~-----g~~~~~l~G~~~~~~R~~~i~~F~~ 166 (346)
T d1z3ix1 99 LSGKML-VLDYILAMTRTTT------SDKVVLVSNYTQTLDLFEKLCRNR-----RYLYVRLDGTMSIKKRAKIVERFNN 166 (346)
T ss_dssp GSHHHH-HHHHHHHHHHHHC------CCEEEEEESCHHHHHHHHHHHHHH-----TCCEEEECSSCCHHHHHHHHHHHHS
T ss_pred cCHHHH-HHHHHHHHHHHhc------CCceeEEeehhhhhHHHHHHHhhh-----hccccccccchhHHHHHHHHHhhhc
Confidence 389985 4555555544332 778999999887766554444442 67888889998866544332 11
Q ss_pred ---CCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccc
Q 013962 113 ---GVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEAD 147 (433)
Q Consensus 113 ---~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h 147 (433)
...|++.+.... ....++.....||+=+.+
T Consensus 167 ~~~~~~vlLls~~ag-----g~GlnL~~a~~vi~~d~~ 199 (346)
T d1z3ix1 167 PSSPEFIFMLSSKAG-----GCGLNLIGANRLVMFDPD 199 (346)
T ss_dssp TTCCCCEEEEEGGGS-----CTTCCCTTEEEEEECSCC
T ss_pred ccccceeeeecchhh-----hhccccccceEEEEecCC
Confidence 233566553321 223445555666653333
No 290
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=40.21 E-value=6.5 Score=28.28 Aligned_cols=14 Identities=36% Similarity=0.449 Sum_probs=12.5
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|++|+|||.
T Consensus 7 kI~ivG~~~vGKSS 20 (169)
T d1upta_ 7 RILILGLDGAGKTT 20 (169)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 37899999999995
No 291
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=39.67 E-value=6.3 Score=32.08 Aligned_cols=15 Identities=27% Similarity=0.215 Sum_probs=13.0
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
-.++.||.|+|||.+
T Consensus 26 lnvlvG~NgsGKS~i 40 (308)
T d1e69a_ 26 VTAIVGPNGSGKSNI 40 (308)
T ss_dssp EEEEECCTTTCSTHH
T ss_pred eEEEECCCCCcHHHH
Confidence 468999999999974
No 292
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.48 E-value=6.8 Score=27.94 Aligned_cols=14 Identities=36% Similarity=0.332 Sum_probs=12.4
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|++|+|||.
T Consensus 2 KI~liG~~nvGKSS 15 (166)
T d2qtvb1 2 KLLFLGLDNAGKTT 15 (166)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999995
No 293
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.41 E-value=8.7 Score=27.76 Aligned_cols=13 Identities=31% Similarity=0.601 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 5 i~vvG~~~vGKTS 17 (166)
T d1g16a_ 5 ILLIGDSGVGKSC 17 (166)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 294
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.14 E-value=8.9 Score=27.75 Aligned_cols=14 Identities=14% Similarity=0.133 Sum_probs=12.5
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 6 Kv~liG~~~vGKTs 19 (167)
T d1xtqa1 6 KIAILGYRSVGKSS 19 (167)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 48899999999995
No 295
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=39.07 E-value=5.5 Score=29.42 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=12.5
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+||+|||.
T Consensus 2 ~I~lvG~~nvGKSs 15 (184)
T d2cxxa1 2 TIIFAGRSNVGKST 15 (184)
T ss_dssp EEEEEEBTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999996
No 296
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.86 E-value=7.1 Score=28.26 Aligned_cols=13 Identities=15% Similarity=0.348 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|++|+|||.
T Consensus 5 v~liG~~~vGKSs 17 (164)
T d1z2aa1 5 MVVVGNGAVGKSS 17 (164)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 297
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.49 E-value=7.2 Score=28.55 Aligned_cols=13 Identities=31% Similarity=0.521 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 6 ivvvG~~~vGKTs 18 (173)
T d2a5ja1 6 YIIIGDTGVGKSC 18 (173)
T ss_dssp EEEESSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 298
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.25 E-value=7.5 Score=28.31 Aligned_cols=13 Identities=38% Similarity=0.470 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 5 i~lvG~~~vGKTs 17 (168)
T d2atva1 5 LAIFGRAGVGKSA 17 (168)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999995
No 299
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=38.20 E-value=5.6 Score=32.06 Aligned_cols=20 Identities=35% Similarity=0.363 Sum_probs=17.1
Q ss_pred cCCcEEEEcCCCChHHHHHH
Q 013962 25 SGRDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 25 ~~~~~l~~~~TGsGKT~~~~ 44 (433)
.|+...|.++.|+|||....
T Consensus 66 ~GQr~~Ifg~~g~GKt~l~~ 85 (276)
T d1fx0a3 66 RGQRELIIGDRQTGKTAVAT 85 (276)
T ss_dssp TTCBCBEEESSSSSHHHHHH
T ss_pred CCceEeeccCCCCChHHHHH
Confidence 67889999999999996543
No 300
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.97 E-value=6.9 Score=28.58 Aligned_cols=13 Identities=38% Similarity=0.629 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|++|+|||.
T Consensus 6 i~vvG~~~vGKTs 18 (170)
T d1i2ma_ 6 LVLVGDGGTGKTT 18 (170)
T ss_dssp EEEEECTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7889999999995
No 301
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=37.59 E-value=6.3 Score=29.55 Aligned_cols=14 Identities=14% Similarity=0.349 Sum_probs=12.6
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+.+.|+||+|||.
T Consensus 25 ~I~lvG~~n~GKST 38 (195)
T d1svia_ 25 EIALAGRSNVGKSS 38 (195)
T ss_dssp EEEEEEBTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 48899999999995
No 302
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=37.27 E-value=5.9 Score=29.33 Aligned_cols=14 Identities=36% Similarity=0.449 Sum_probs=12.8
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|++|+|||.
T Consensus 19 KI~lvG~~~vGKTs 32 (182)
T d1moza_ 19 RILILGLDGAGKTT 32 (182)
T ss_dssp EEEEEEETTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 48999999999996
No 303
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.71 E-value=7.3 Score=28.50 Aligned_cols=13 Identities=31% Similarity=0.603 Sum_probs=12.1
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 8 I~lvG~~~vGKTs 20 (174)
T d2bmea1 8 FLVIGNAGTGKSC 20 (174)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 304
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.70 E-value=10 Score=28.05 Aligned_cols=13 Identities=23% Similarity=0.294 Sum_probs=12.1
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 12 i~lvG~~~vGKTs 24 (185)
T d2atxa1 12 CVVVGDGAVGKTC 24 (185)
T ss_dssp EEEEECTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 8899999999995
No 305
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.69 E-value=8.1 Score=28.09 Aligned_cols=13 Identities=23% Similarity=0.358 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|++|+|||.
T Consensus 5 i~viG~~~vGKTs 17 (171)
T d2erxa1 5 VAVFGAGGVGKSS 17 (171)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999995
No 306
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=36.28 E-value=7.8 Score=27.99 Aligned_cols=14 Identities=36% Similarity=0.235 Sum_probs=12.3
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 4 ki~i~G~~~~GKTs 17 (164)
T d1zd9a1 4 ELTLVGLQYSGKTT 17 (164)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47889999999995
No 307
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=36.06 E-value=8.2 Score=28.34 Aligned_cols=14 Identities=14% Similarity=0.114 Sum_probs=12.4
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
-+.+.|.+|+|||.
T Consensus 7 ~I~lvG~~~~GKSS 20 (178)
T d1wf3a1 7 FVAIVGKPNVGKST 20 (178)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 37899999999995
No 308
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.95 E-value=8.3 Score=28.23 Aligned_cols=13 Identities=23% Similarity=0.498 Sum_probs=12.1
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 7 i~vvG~~~vGKTs 19 (175)
T d2f9la1 7 VVLIGDSGVGKSN 19 (175)
T ss_dssp EEEESSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999996
No 309
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=35.72 E-value=7.7 Score=28.30 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=15.4
Q ss_pred HhhcCC--cEEEEcCCCChHHH
Q 013962 22 VALSGR--DLLGCAETGSGKTA 41 (433)
Q Consensus 22 ~~~~~~--~~l~~~~TGsGKT~ 41 (433)
.++.++ .+++.|..|+|||.
T Consensus 9 ~~~~~k~~kI~vvG~~~~GKSs 30 (177)
T d1zj6a1 9 RLFNHQEHKVIIVGLDNAGKTT 30 (177)
T ss_dssp HHHTTSCEEEEEEESTTSSHHH
T ss_pred HHhCCCeEEEEEECCCCCCHHH
Confidence 344444 59999999999995
No 310
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=35.49 E-value=7.9 Score=27.73 Aligned_cols=14 Identities=14% Similarity=0.359 Sum_probs=12.5
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|++|+|||.
T Consensus 3 kI~lvG~~nvGKSs 16 (161)
T d2gj8a1 3 KVVIAGRPNAGKSS 16 (161)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999995
No 311
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.31 E-value=12 Score=27.35 Aligned_cols=13 Identities=38% Similarity=0.636 Sum_probs=12.1
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 10 i~vvG~~~vGKTs 22 (177)
T d1x3sa1 10 ILIIGESGVGKSS 22 (177)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 312
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.00 E-value=8.9 Score=27.77 Aligned_cols=14 Identities=29% Similarity=0.238 Sum_probs=12.3
Q ss_pred EEEEcCCCChHHHH
Q 013962 29 LLGCAETGSGKTAA 42 (433)
Q Consensus 29 ~l~~~~TGsGKT~~ 42 (433)
+++.|..|+|||..
T Consensus 6 ivlvG~~~vGKTsL 19 (167)
T d1z08a1 6 VVLLGEGCVGKTSL 19 (167)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 78999999999953
No 313
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=34.96 E-value=37 Score=22.74 Aligned_cols=27 Identities=11% Similarity=0.199 Sum_probs=12.4
Q ss_pred EEEEEeccccHHHHHHHHHHCCCceee
Q 013962 245 TIVFVERKTRCDEVSEALVAEGLHAVA 271 (433)
Q Consensus 245 ~lvf~~~~~~~~~l~~~L~~~~~~~~~ 271 (433)
+||.=.....++.+.+.|+..|+.+..
T Consensus 4 ILiVDD~~~~~~~l~~~L~~~g~~v~~ 30 (121)
T d1ys7a2 4 VLVVDDDSDVLASLERGLRLSGFEVAT 30 (121)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 444444444444455555544444433
No 314
>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=34.88 E-value=13 Score=25.89 Aligned_cols=36 Identities=28% Similarity=0.352 Sum_probs=29.8
Q ss_pred CCCeEEEEEeccccHHHHHHHHHHCCC--ceeeecCCC
Q 013962 241 PFPLTIVFVERKTRCDEVSEALVAEGL--HAVALHGGR 276 (433)
Q Consensus 241 ~~~~~lvf~~~~~~~~~l~~~L~~~~~--~~~~~~~~~ 276 (433)
+..++++||.+-..+...+..|...|+ .+..+.|++
T Consensus 79 ~~~~iV~~C~~g~rs~~aa~~L~~~G~~~~V~~L~GG~ 116 (136)
T d1yt8a1 79 PRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGT 116 (136)
T ss_dssp TTSEEEEECSSSHHHHHHHHHHHHTTCSSCEEEETTHH
T ss_pred ccceEEEEcCCCCchHHHHHHHHHcCCCceEEEeCCcH
Confidence 446799999998888999999999998 367788874
No 315
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.69 E-value=9.2 Score=27.76 Aligned_cols=13 Identities=38% Similarity=0.508 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 4 i~lvG~~~vGKTs 16 (168)
T d2gjsa1 4 VLLLGAPGVGKSA 16 (168)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 6889999999995
No 316
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.64 E-value=11 Score=27.62 Aligned_cols=14 Identities=29% Similarity=0.413 Sum_probs=12.3
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 4 KivvvG~~~vGKTs 17 (177)
T d1kmqa_ 4 KLVIVGDGACGKTC 17 (177)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 47889999999995
No 317
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=34.55 E-value=35 Score=22.89 Aligned_cols=50 Identities=12% Similarity=0.231 Sum_probs=34.6
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEE
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVA 298 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~ 298 (433)
+++||.=.+...++.++..|...|+.+...+.+ .+.++.+.+..+++++.
T Consensus 3 p~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~al~~l~~~~~dlii~ 52 (121)
T d1xhfa1 3 PHILIVEDELVTRNTLKSIFEAEGYDVFEATDG------AEMHQILSEYDINLVIM 52 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEESSH------HHHHHHHHHSCCSEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCh------HHHHHHHHhcCCCEEEe
Confidence 467888788888889999999888877665532 23445555566666554
No 318
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.23 E-value=8.6 Score=28.10 Aligned_cols=14 Identities=36% Similarity=0.499 Sum_probs=12.5
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 8 Kv~lvG~~~vGKTs 21 (173)
T d2fn4a1 8 KLVVVGGGGVGKSA 21 (173)
T ss_dssp EEEEEECTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 38999999999995
No 319
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=33.78 E-value=7.4 Score=28.67 Aligned_cols=15 Identities=20% Similarity=0.186 Sum_probs=12.7
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
++.+.|.+|+|||..
T Consensus 3 ~VaivG~~nvGKSTL 17 (180)
T d1udxa2 3 DVGLVGYPNAGKSSL 17 (180)
T ss_dssp SEEEECCGGGCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 478899999999963
No 320
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.75 E-value=9.6 Score=27.75 Aligned_cols=13 Identities=31% Similarity=0.572 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 5 i~~vG~~~vGKSs 17 (175)
T d1ky3a_ 5 VIILGDSGVGKTS 17 (175)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 321
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.41 E-value=14 Score=26.98 Aligned_cols=14 Identities=29% Similarity=0.285 Sum_probs=12.5
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 7 ki~vlG~~~vGKTs 20 (175)
T d2bmja1 7 RLGVLGDARSGKSS 20 (175)
T ss_dssp EEEEECCTTTTHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999995
No 322
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.35 E-value=9.1 Score=27.85 Aligned_cols=14 Identities=36% Similarity=0.480 Sum_probs=12.6
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 7 Ki~lvG~~~vGKTs 20 (171)
T d2erya1 7 RLVVVGGGGVGKSA 20 (171)
T ss_dssp EEEEEECTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 38999999999995
No 323
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=33.28 E-value=9.5 Score=29.34 Aligned_cols=15 Identities=33% Similarity=0.306 Sum_probs=13.1
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
.+++.|+.|+|||..
T Consensus 8 KilllG~~~vGKTsl 22 (221)
T d1azta2 8 RLLLLGAGESGKSTI 22 (221)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 489999999999953
No 324
>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.15 E-value=1.1e+02 Score=24.21 Aligned_cols=86 Identities=14% Similarity=0.160 Sum_probs=50.8
Q ss_pred hhcCCcEEEEcCC-CChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCC
Q 013962 23 ALSGRDLLGCAET-GSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGT 101 (433)
Q Consensus 23 ~~~~~~~l~~~~T-GsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~ 101 (433)
.++++.+||.+.+ |.|+.++ ..+.+. |..++++.-+.+-..+..+++........+.++..+..+.
T Consensus 9 ~L~gKvalITGas~GIG~aia------~~la~~-------Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dv 75 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIV------KELLEL-------GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI 75 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHH------HHHHHT-------TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT
T ss_pred CCCCCEEEEeCCCCHHHHHHH------HHHHHC-------CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccC
Confidence 4678888775544 4565532 222222 7788888777777777888887654433355666666665
Q ss_pred CHHHHHHH-------hhCCCcEEEecc
Q 013962 102 NIAEQRSE-------LRGGVSIVVATP 121 (433)
Q Consensus 102 ~~~~~~~~-------~~~~~~Ivv~T~ 121 (433)
...+.... ..+..+|+|-..
T Consensus 76 s~~~~v~~~~~~~~~~~G~iDiLVnnA 102 (297)
T d1yxma1 76 RNEEEVNNLVKSTLDTFGKINFLVNNG 102 (297)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCHHHHHHHHHHHHHHhCCeEEEEeec
Confidence 53332221 235677777553
No 325
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=33.14 E-value=13 Score=27.06 Aligned_cols=22 Identities=18% Similarity=0.303 Sum_probs=16.6
Q ss_pred HHHhhcCC--cEEEEcCCCChHHH
Q 013962 20 MPVALSGR--DLLGCAETGSGKTA 41 (433)
Q Consensus 20 i~~~~~~~--~~l~~~~TGsGKT~ 41 (433)
+..+.+.+ .+++.|+.|+|||.
T Consensus 4 ~~~~~~~k~~kIvlvG~~~vGKTS 27 (173)
T d1e0sa_ 4 LSKIFGNKEMRILMLGLDAAGKTT 27 (173)
T ss_dssp HHHHHTTCCEEEEEEEETTSSHHH
T ss_pred hhhhhCCCeEEEEEECCCCCCHHH
Confidence 34455444 48999999999995
No 326
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=32.88 E-value=9.1 Score=27.90 Aligned_cols=14 Identities=29% Similarity=0.304 Sum_probs=12.7
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 18 kI~vvG~~~vGKSs 31 (176)
T d1fzqa_ 18 RILLLGLDNAGKTT 31 (176)
T ss_dssp EEEEEESTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 38999999999995
No 327
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=32.86 E-value=96 Score=23.75 Aligned_cols=58 Identities=16% Similarity=0.321 Sum_probs=41.6
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHH-HHHHHHHHh--cCCCcEEEEec
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSD-RESALRDFR--NGSTNILVATD 300 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-r~~~~~~f~--~g~~~vlv~T~ 300 (433)
..+++...+.+.++.+.+.++..+..+..+..+.+..+ ....++... -|.+++||...
T Consensus 35 a~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnna 95 (251)
T d2c07a1 35 SHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNA 95 (251)
T ss_dssp SEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeecc
Confidence 45777777778889999999888888888888776543 334444432 27899999864
No 328
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=32.79 E-value=5.4 Score=31.17 Aligned_cols=20 Identities=15% Similarity=0.333 Sum_probs=16.2
Q ss_pred HhhcCCcEEEEcCCCChHHH
Q 013962 22 VALSGRDLLGCAETGSGKTA 41 (433)
Q Consensus 22 ~~~~~~~~l~~~~TGsGKT~ 41 (433)
..+.++..++.|++|.|||.
T Consensus 93 ~~l~~~~~vl~G~SGVGKSS 112 (231)
T d1t9ha2 93 PHFQDKTTVFAGQSGVGKSS 112 (231)
T ss_dssp GGGTTSEEEEEESHHHHHHH
T ss_pred HhhccceEEEECCCCccHHH
Confidence 33467778899999999995
No 329
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=32.42 E-value=10 Score=27.48 Aligned_cols=14 Identities=29% Similarity=0.489 Sum_probs=12.5
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|+.|+|||.
T Consensus 6 KivlvG~~~vGKTs 19 (168)
T d1u8za_ 6 KVIMVGSGGVGKSA 19 (168)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 37899999999995
No 330
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.15 E-value=10 Score=27.44 Aligned_cols=13 Identities=31% Similarity=0.598 Sum_probs=12.2
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 9 i~vvG~~~vGKTs 21 (170)
T d2g6ba1 9 VMLVGDSGVGKTC 21 (170)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 8999999999995
No 331
>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.99 E-value=14 Score=23.94 Aligned_cols=35 Identities=17% Similarity=0.166 Sum_probs=29.1
Q ss_pred CCeEEEEEeccccHHHHHHHHHHCCCc-eeeecCCC
Q 013962 242 FPLTIVFVERKTRCDEVSEALVAEGLH-AVALHGGR 276 (433)
Q Consensus 242 ~~~~lvf~~~~~~~~~l~~~L~~~~~~-~~~~~~~~ 276 (433)
..+++++|++-..+..++..|.+.|+. +..+.|++
T Consensus 58 ~~~vv~~~~~g~~s~~~~~~l~~~G~~nV~~l~GG~ 93 (101)
T d1yt8a2 58 DTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGL 93 (101)
T ss_dssp TSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHH
T ss_pred CceeeeccchhhhHHHHHHHHHHcCCCcEEEeCChH
Confidence 456899999999999999999999985 77777765
No 332
>g1pyo.1 c.17.1.1 (A:,B:) Caspase-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.86 E-value=63 Score=25.01 Aligned_cols=49 Identities=14% Similarity=0.242 Sum_probs=38.9
Q ss_pred CCCeEEEEEecc--------------ccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhc
Q 013962 241 PFPLTIVFVERK--------------TRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 290 (433)
Q Consensus 241 ~~~~~lvf~~~~--------------~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 290 (433)
+.+-+||+.|.. ..++.+++.|++.|+.+..+ .+++..+....++.|.+
T Consensus 25 prG~aLII~N~~f~~~~~l~~r~g~~~Da~~l~~~l~~lGF~V~~~-~nlt~~em~~~l~~f~~ 87 (257)
T g1pyo.1 25 PRGLALVLSNVHFTGEKELEFRSGGDVDHSTLVTLFKLLGYDVHVL-CDQTAQEMQEKLQNFAQ 87 (257)
T ss_dssp SSEEEEEEECCCCCSSSCSCCCTTHHHHHHHHHHHHHHTTEEEEEE-ESCCHHHHHHHHHHHHT
T ss_pred cCCEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHHHCCCEEEEE-ecCCHHHHHHHHHHHHh
Confidence 445688888742 37899999999999987655 48899999999999954
No 333
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=31.69 E-value=61 Score=22.45 Aligned_cols=58 Identities=9% Similarity=0.227 Sum_probs=32.0
Q ss_pred CeEEEEEec-----cccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecccc
Q 013962 243 PLTIVFVER-----KTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVAS 303 (433)
Q Consensus 243 ~~~lvf~~~-----~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~~~ 303 (433)
++++|+..| ...++.+++.|...+..+..++-.-. +.......+.+-+ -++++|++-.
T Consensus 3 ~Ki~IiY~S~tGnTe~~A~~Ia~~l~~~g~ev~~~~~~~~--~~~~~~~~l~~~d-~vi~Gspt~~ 65 (152)
T d1e5da1 3 NKVVIFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCKAC--HHSQIMSEISDAG-AVIVGSPTHN 65 (152)
T ss_dssp SEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETTTS--CHHHHHHHHHTCS-EEEEECCCBT
T ss_pred CeEEEEEECCCcHHHHHHHHHHHHHhhCCCEEEEeecccC--ChhhhccchhhCC-EEEEeccccC
Confidence 445555544 34566777777788888777764322 1222333333222 3777777654
No 334
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.31 E-value=11 Score=27.39 Aligned_cols=13 Identities=31% Similarity=0.506 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 6 v~lvG~~~vGKTs 18 (172)
T d2g3ya1 6 VVLIGEQGVGKST 18 (172)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 335
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.02 E-value=11 Score=27.10 Aligned_cols=14 Identities=29% Similarity=0.444 Sum_probs=12.3
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|..|+|||.
T Consensus 6 Ki~lvG~~~vGKTs 19 (167)
T d1z0ja1 6 KVCLLGDTGVGKSS 19 (167)
T ss_dssp EEEEECCTTSSHHH
T ss_pred EEEEECCCCcCHHH
Confidence 37899999999995
No 336
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=30.83 E-value=12 Score=27.58 Aligned_cols=14 Identities=21% Similarity=0.138 Sum_probs=12.4
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
++-+.|++|+|||.
T Consensus 3 ~VaiiG~~nvGKSS 16 (185)
T d1lnza2 3 DVGLVGFPSVGKST 16 (185)
T ss_dssp CEEEESSTTSSHHH
T ss_pred eEEEECCCCCCHHH
Confidence 47889999999996
No 337
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=30.59 E-value=24 Score=27.92 Aligned_cols=36 Identities=11% Similarity=0.044 Sum_probs=21.5
Q ss_pred cHHHHHHHHHhhcC----C-cEEEEcCCCChHHHHHHHHHHHH
Q 013962 13 TSIQAQAMPVALSG----R-DLLGCAETGSGKTAAFTIPMIQH 50 (433)
Q Consensus 13 ~~~Q~~~i~~~~~~----~-~~l~~~~TGsGKT~~~~~~~~~~ 50 (433)
..+.. ++..++.+ + .+++.||.++|||.. +..+...
T Consensus 87 ~~f~~-~l~~~L~~~~~k~n~~~l~G~~~tGKS~f-~~~i~~~ 127 (267)
T d1u0ja_ 87 QYAAS-VFLGWATKKFGKRNTIWLFGPATTGKTNI-AEAIAHT 127 (267)
T ss_dssp HHHHH-HHHHHHTTCSTTCCEEEEECSTTSSHHHH-HHHHHHH
T ss_pred HHHHH-HHHHHHcCCCCccEEEEEEcCCCCCHHHH-HHHHHHH
Confidence 34444 44445532 2 378899999999964 3434443
No 338
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=30.59 E-value=12 Score=27.62 Aligned_cols=13 Identities=31% Similarity=0.572 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|..|+|||.
T Consensus 5 v~vvG~~~vGKSS 17 (184)
T d1vg8a_ 5 VIILGDSGVGKTS 17 (184)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 339
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=30.53 E-value=11 Score=27.63 Aligned_cols=14 Identities=14% Similarity=0.214 Sum_probs=12.6
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+.+.|.+|+|||.
T Consensus 10 kV~iiG~~~~GKST 23 (186)
T d1mkya2 10 KVAIVGRPNVGKST 23 (186)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 47899999999996
No 340
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.45 E-value=11 Score=27.13 Aligned_cols=13 Identities=38% Similarity=0.411 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|..|+|||.
T Consensus 3 v~vvG~~~vGKTs 15 (164)
T d1yzqa1 3 LVFLGEQSVGKTS 15 (164)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 6889999999995
No 341
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.19 E-value=9.4 Score=27.86 Aligned_cols=13 Identities=46% Similarity=0.657 Sum_probs=8.4
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|.+|+|||.
T Consensus 9 i~vvG~~~vGKTs 21 (173)
T d2fu5c1 9 LLLIGDSGVGKTC 21 (173)
T ss_dssp EEEECCCCC----
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 342
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=30.17 E-value=11 Score=31.11 Aligned_cols=14 Identities=36% Similarity=0.332 Sum_probs=12.4
Q ss_pred EEEEcCCCChHHHH
Q 013962 29 LLGCAETGSGKTAA 42 (433)
Q Consensus 29 ~l~~~~TGsGKT~~ 42 (433)
+.|.|+-|+|||..
T Consensus 8 I~IEG~iGsGKSTl 21 (331)
T d1osna_ 8 IYLDGAYGIGKTTA 21 (331)
T ss_dssp EEEEESSSSCTTHH
T ss_pred EEEECCCCCCHHHH
Confidence 78899999999964
No 343
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.05 E-value=15 Score=26.88 Aligned_cols=13 Identities=23% Similarity=0.294 Sum_probs=12.1
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 8 ivviG~~~vGKTs 20 (183)
T d1mh1a_ 8 CVVVGDGAVGKTC 20 (183)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999995
No 344
>g1qtn.1 c.17.1.1 (A:,B:) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.68 E-value=63 Score=24.66 Aligned_cols=49 Identities=4% Similarity=0.040 Sum_probs=38.7
Q ss_pred CCCeEEEEEecc---------------------ccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhc
Q 013962 241 PFPLTIVFVERK---------------------TRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 290 (433)
Q Consensus 241 ~~~~~lvf~~~~---------------------~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 290 (433)
|.+-+||+.|.. ..++.+++.|+..|+.+..+. .++..+....++.|..
T Consensus 10 prg~aLII~N~~y~~~~~~~~~~~~l~~r~ga~~Da~~l~~~l~~lGF~V~~~~-nlt~~~~~~~l~~~~~ 79 (242)
T g1qtn.1 10 PRGYCLIINNHNFAKAREKVPKLHSIRDRNGTHLDAGALTTTFEELHFEIKPHD-DCTVEQIYEILKIYQL 79 (242)
T ss_dssp SCCEEEEEECCCCHHHHHHCGGGTTCCCCTTHHHHHHHHHHHHHHTTCEEEEEE-SCCHHHHHHHHHHHHH
T ss_pred CccEEEEEeccccCCcccccccccccccCCChHHHHHHHHHHHHHCCCEEEECc-CCCHHHHHHHHHHhhh
Confidence 345688888853 378999999999999876554 7888999999999964
No 345
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.60 E-value=11 Score=27.29 Aligned_cols=13 Identities=31% Similarity=0.501 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 8 i~lvG~~~vGKTs 20 (171)
T d2ew1a1 8 IVLIGNAGVGKTC 20 (171)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 346
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=29.53 E-value=15 Score=29.36 Aligned_cols=15 Identities=33% Similarity=0.421 Sum_probs=13.1
Q ss_pred EEEEcCCCChHHHHH
Q 013962 29 LLGCAETGSGKTAAF 43 (433)
Q Consensus 29 ~l~~~~TGsGKT~~~ 43 (433)
+.|.|.-|.|||..+
T Consensus 47 v~I~GmgGiGKTtLA 61 (277)
T d2a5yb3 47 LFLHGRAGSGKSVIA 61 (277)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 679999999999754
No 347
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=29.50 E-value=17 Score=30.02 Aligned_cols=15 Identities=20% Similarity=0.200 Sum_probs=12.9
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
.+.+.|+-|+|||..
T Consensus 8 rI~iEG~iGsGKSTl 22 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTT 22 (333)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCccCCHHHH
Confidence 378899999999974
No 348
>d2gc6a1 c.59.1.2 (A:297-425) Folylpolyglutamate synthetase, C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=29.44 E-value=16 Score=24.92 Aligned_cols=42 Identities=14% Similarity=0.183 Sum_probs=19.7
Q ss_pred EEEEcccchhccCCCHHHHHHHHhhCCCCCcEEEEEeecchHHHH
Q 013962 140 FVILDEADRMLDMGFEPQIREVMQNLPDKHQTLLFSATMPVEIEA 184 (433)
Q Consensus 140 ~vIiDE~h~~~~~~~~~~~~~~~~~~~~~~~~i~~SAT~~~~~~~ 184 (433)
.+|+|=||.-.. ....... ++.......++.++++-..+...
T Consensus 13 ~iilD~AHN~~~--~~~l~~~-l~~~~~~~~~~v~g~~~dKd~~~ 54 (129)
T d2gc6a1 13 LIVIDGAHNPDG--INGLITA-LKQLFSQPITVIAGILADKDYAA 54 (129)
T ss_dssp TEEECCCCSHHH--HHHHHHH-HHHHCSSCCEEEECCC----CCS
T ss_pred cEEEECCCCHHH--HHHHhhc-cccccchhhhhhccccCCccHHH
Confidence 488999997432 1222222 33334444456666665444333
No 349
>d1vl1a_ c.124.1.1 (A:) 6-phosphogluconolactonase {Thermotoga maritima [TaxId: 2336]}
Probab=29.17 E-value=49 Score=24.98 Aligned_cols=56 Identities=21% Similarity=0.341 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhccCCCceEEEEECCCCHHHHHHHhhCCCcEEEeccHHHHHHHHcCCCCCCCccEEEEcccc
Q 013962 73 ELAQQIEKEVKALSRSLDSFKTAIVVGGTNIAEQRSELRGGVSIVVATPGRFLDHLQQGNTSLSRVSFVILDEAD 147 (433)
Q Consensus 73 ~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ivv~T~~~l~~~~~~~~~~~~~~~~vIiDE~h 147 (433)
.+++.+.+.+.+.....+ .-...+.||. ||..+++.+......++++.+..+||-.
T Consensus 14 ~~a~~i~~~~~~~~~~~~-~~~i~lsGG~------------------tp~~~y~~L~~~~~~w~kv~~~~~DER~ 69 (218)
T d1vl1a_ 14 FVVEKIRTKMEKLLEEKD-KIFVVLAGGR------------------TPLPVYEKLAEQKFPWNRIHFFLSDERY 69 (218)
T ss_dssp HHHHHHHHHHHHHHHHCS-CEEEEECCST------------------THHHHHHHHTTSCCCGGGEEEEESEEES
T ss_pred HHHHHHHHHHHHHHHhCC-CEEEEECCCh------------------hHHHHHHHHHhcCCCcceEEEEecceec
Confidence 455555555555444332 3334456665 4444555555556677888899999964
No 350
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.03 E-value=12 Score=27.73 Aligned_cols=13 Identities=31% Similarity=0.350 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|..|+|||.
T Consensus 5 ivllG~~~vGKTs 17 (200)
T d1zcba2 5 ILLLGAGESGKST 17 (200)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 7899999999995
No 351
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.02 E-value=50 Score=24.53 Aligned_cols=74 Identities=20% Similarity=0.211 Sum_probs=50.7
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHC----CCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecc-----c-ccCcccC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAE----GLHAVALHGGRNQSDRESALRDFRNGSTNILVATDV-----A-SRGLDVM 309 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~-----~-~~Gidip 309 (433)
......++.+++...+......+... ++.+...+|+.........+ ....+|+|+|+. + ...+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l----~~~~~Ili~TP~~l~~~l~~~~~~l~ 142 (206)
T d1s2ma1 67 LNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRL----NETVHILVGTPGRVLDLASRKVADLS 142 (206)
T ss_dssp SCSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHT----TSCCSEEEECHHHHHHHHHTTCSCCT
T ss_pred cccccceeeccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHHh----cccceEEEECCcccccccccceeecc
Confidence 34455888999988887766666543 67888889888776655443 345789999942 1 2356667
Q ss_pred CCcEEEEc
Q 013962 310 GVAHVVNL 317 (433)
Q Consensus 310 ~~~~Vi~~ 317 (433)
+++++|.-
T Consensus 143 ~l~~lV~D 150 (206)
T d1s2ma1 143 DCSLFIMD 150 (206)
T ss_dssp TCCEEEEE
T ss_pred cceEEEee
Confidence 77777753
No 352
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=28.89 E-value=12 Score=27.35 Aligned_cols=14 Identities=14% Similarity=0.356 Sum_probs=12.7
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+.+.|.|++|||.
T Consensus 18 ~I~lvG~~NvGKSS 31 (188)
T d1puia_ 18 EVAFAGRSNAGKSS 31 (188)
T ss_dssp EEEEEECTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 48999999999995
No 353
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.85 E-value=13 Score=26.88 Aligned_cols=13 Identities=31% Similarity=0.424 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 6 i~vvG~~~vGKTs 18 (170)
T d1ek0a_ 6 LVLLGEAAVGKSS 18 (170)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 6889999999995
No 354
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.43 E-value=16 Score=27.11 Aligned_cols=13 Identities=23% Similarity=0.294 Sum_probs=11.9
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 6 vvllG~~~vGKTS 18 (191)
T d2ngra_ 6 CVVVGDGAVGKTC 18 (191)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 355
>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}
Probab=28.30 E-value=18 Score=25.14 Aligned_cols=37 Identities=14% Similarity=0.071 Sum_probs=29.3
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHCCC-ceeeecCCC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAEGL-HAVALHGGR 276 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 276 (433)
.+..++++||.+-..+...+-.|...|+ ++..|.|++
T Consensus 86 ~~~~~vV~yC~~G~~a~~~~~~l~~~G~~~v~~ydGg~ 123 (136)
T d1e0ca2 86 TPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSW 123 (136)
T ss_dssp CTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHH
T ss_pred CCCCceEEeCCChHHHHHHHHHHHHcCCCCcEEecCCH
Confidence 4456799999987778888889999998 477777753
No 356
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.15 E-value=12 Score=27.86 Aligned_cols=13 Identities=38% Similarity=0.585 Sum_probs=12.0
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+++.|+.|+|||.
T Consensus 9 ivvvG~~~vGKTs 21 (194)
T d2bcgy1 9 LLLIGNSGVGKSC 21 (194)
T ss_dssp EEEEESTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 7899999999995
No 357
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=27.74 E-value=44 Score=22.11 Aligned_cols=48 Identities=21% Similarity=0.385 Sum_probs=30.8
Q ss_pred eEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEE
Q 013962 244 LTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILV 297 (433)
Q Consensus 244 ~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv 297 (433)
++||.=.....++.+...|...|+.+...+.+ .+.++.+++...++++
T Consensus 2 rILiVdDd~~~~~~l~~~L~~~g~~v~~a~~~------~eal~~~~~~~~dlil 49 (117)
T d2a9pa1 2 KILIVDDEKPISDIIKFNMTKEGYEVVTAFNG------REALEQFEAEQPDIII 49 (117)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESSH------HHHHHHHHHHCCSEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCH------HHHHHHHHhcCCCEEE
Confidence 46777777777888888888888877655432 2334444545565544
No 358
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.64 E-value=12 Score=27.63 Aligned_cols=15 Identities=33% Similarity=0.288 Sum_probs=12.7
Q ss_pred cEEEEcCCCChHHHH
Q 013962 28 DLLGCAETGSGKTAA 42 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~ 42 (433)
.+++.|..|+|||..
T Consensus 4 Kiv~lG~~~vGKTsl 18 (200)
T d2bcjq2 4 KLLLLGTGESGKSTF 18 (200)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 378999999999953
No 359
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=27.46 E-value=16 Score=29.17 Aligned_cols=17 Identities=29% Similarity=0.315 Sum_probs=14.5
Q ss_pred CcEEEEcCCCChHHHHH
Q 013962 27 RDLLGCAETGSGKTAAF 43 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~ 43 (433)
+|+-+.++.|+|||...
T Consensus 7 Rni~i~gh~~~GKTtL~ 23 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTT 23 (276)
T ss_dssp EEEEEEECTTSCHHHHH
T ss_pred eEEEEEeCCCCCHHHHH
Confidence 57899999999999643
No 360
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=27.26 E-value=48 Score=22.00 Aligned_cols=30 Identities=10% Similarity=0.096 Sum_probs=18.5
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeee
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVAL 272 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~ 272 (433)
+++||.=......+.+...|...|+.+...
T Consensus 2 krILvVDD~~~~~~~l~~~L~~~g~~v~~a 31 (119)
T d1peya_ 2 EKILIVDDQSGIRILLNEVFNKEGYQTFQA 31 (119)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCEEEEe
Confidence 346666666666666677776666665443
No 361
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.93 E-value=14 Score=26.79 Aligned_cols=13 Identities=15% Similarity=0.243 Sum_probs=11.8
Q ss_pred EEEEcCCCChHHH
Q 013962 29 LLGCAETGSGKTA 41 (433)
Q Consensus 29 ~l~~~~TGsGKT~ 41 (433)
+.+.|.+|.|||.
T Consensus 8 I~iiG~~nvGKSS 20 (179)
T d1egaa1 8 IAIVGRPNVGKST 20 (179)
T ss_dssp EEEECSSSSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6789999999995
No 362
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.49 E-value=30 Score=26.71 Aligned_cols=17 Identities=24% Similarity=0.341 Sum_probs=13.8
Q ss_pred CcEEEEcCCCChHHHHHH
Q 013962 27 RDLLGCAETGSGKTAAFT 44 (433)
Q Consensus 27 ~~~l~~~~TGsGKT~~~~ 44 (433)
+-.+|.||.++|||. |+
T Consensus 42 ~~~iiTGpN~~GKSt-~l 58 (234)
T d1wb9a2 42 RMLIITGPNMGGKST-YM 58 (234)
T ss_dssp CEEEEECCTTSSHHH-HH
T ss_pred eEEEEeccCchhhHH-HH
Confidence 347999999999995 44
No 363
>d1ozbi_ g.74.1.1 (I:) Preprotein translocase SecA C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=25.59 E-value=7.1 Score=18.18 Aligned_cols=8 Identities=50% Similarity=0.758 Sum_probs=5.2
Q ss_pred cCCCChHH
Q 013962 33 AETGSGKT 40 (433)
Q Consensus 33 ~~TGsGKT 40 (433)
-|.||||-
T Consensus 7 CpCgSgkk 14 (26)
T d1ozbi_ 7 CPCGSGKK 14 (26)
T ss_dssp CTTTCSSB
T ss_pred CCCCCCcc
Confidence 36677775
No 364
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=24.93 E-value=1e+02 Score=23.60 Aligned_cols=58 Identities=16% Similarity=0.090 Sum_probs=41.3
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHH-HHHHHHHHhc--CCCcEEEEec
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSD-RESALRDFRN--GSTNILVATD 300 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-r~~~~~~f~~--g~~~vlv~T~ 300 (433)
-.+++...+.+.++.+.+.++..+..+..+..+.+..+ ....++...+ |.+++||...
T Consensus 36 a~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnA 96 (255)
T d1fmca_ 36 ASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNA 96 (255)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCC
Confidence 34666666777889999999998888888888876543 3444443332 7899999864
No 365
>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}
Probab=24.57 E-value=1.4e+02 Score=22.75 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=41.1
Q ss_pred eEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHH-HHHHHHHHHhc--CCCcEEEEec
Q 013962 244 LTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQS-DRESALRDFRN--GSTNILVATD 300 (433)
Q Consensus 244 ~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~-~r~~~~~~f~~--g~~~vlv~T~ 300 (433)
.+++...+.+.++.+.+.|+..+..+..+..+++.. +....++...+ |.+++||...
T Consensus 28 ~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnA 87 (257)
T d2rhca1 28 RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNA 87 (257)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECC
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecc
Confidence 467777777788999999998888888888876544 34444444433 7899999764
No 366
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.99 E-value=17 Score=26.58 Aligned_cols=14 Identities=36% Similarity=0.366 Sum_probs=12.3
Q ss_pred cEEEEcCCCChHHH
Q 013962 28 DLLGCAETGSGKTA 41 (433)
Q Consensus 28 ~~l~~~~TGsGKT~ 41 (433)
.+++.|..|+|||.
T Consensus 4 KivllG~~~vGKTs 17 (195)
T d1svsa1 4 KLLLLGAGESGKST 17 (195)
T ss_dssp EEEEECSTTSSHHH
T ss_pred EEEEECCCCCCHHH
Confidence 37899999999995
No 367
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=23.83 E-value=60 Score=21.48 Aligned_cols=30 Identities=10% Similarity=0.129 Sum_probs=18.5
Q ss_pred eEEEEEeccccHHHHHHHHHHCCCceeeec
Q 013962 244 LTIVFVERKTRCDEVSEALVAEGLHAVALH 273 (433)
Q Consensus 244 ~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~ 273 (433)
++||.=......+.+...|...|+.+....
T Consensus 4 rILiVDDd~~~~~~l~~~L~~~g~~v~~a~ 33 (121)
T d1mvoa_ 4 KILVVDDEESIVTLLQYNLERSGYDVITAS 33 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEES
T ss_pred CEEEEECCHHHHHHHHHHHHHCCCEEEEEC
Confidence 456665566666666777776666655443
No 368
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=23.73 E-value=1.1e+02 Score=21.32 Aligned_cols=14 Identities=36% Similarity=0.499 Sum_probs=9.9
Q ss_pred CcEEEEcCCCC-hHH
Q 013962 27 RDLLGCAETGS-GKT 40 (433)
Q Consensus 27 ~~~l~~~~TGs-GKT 40 (433)
+++.|.|.||| |++
T Consensus 3 K~I~IlGsTGSIG~~ 17 (150)
T d1r0ka2 3 RTVTVLGATGSIGHS 17 (150)
T ss_dssp EEEEEETTTSHHHHH
T ss_pred cEEEEECCCcHHHHH
Confidence 56777888886 555
No 369
>g1nme.1 c.17.1.1 (A:,B:) Apopain (caspase-3, cpp32) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.19 E-value=83 Score=23.92 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=35.9
Q ss_pred CeEEEEEec--------------cccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhc
Q 013962 243 PLTIVFVER--------------KTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRN 290 (433)
Q Consensus 243 ~~~lvf~~~--------------~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~ 290 (433)
+.+||+.|. ...++.+++.|++.|+.+..+ .+++..+....++.|..
T Consensus 17 G~aLII~N~~y~~~~~l~~r~gs~~Da~~l~~~l~~lGF~V~~~-~nlt~~~~~~~l~~~~~ 77 (238)
T g1nme.1 17 GLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNK-NDLTREEIVELMRDVSK 77 (238)
T ss_dssp EEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHHHTTCEEEEE-ESCCHHHHHHHHHHHHT
T ss_pred CEEEEEeccccCCCCCCCCCCChHHHHHHHHHHHHHCCCEEEEE-eCCCHHHHHHHHHHhhh
Confidence 457777773 247899999999999987655 46778888888888865
No 370
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}
Probab=23.15 E-value=1.5e+02 Score=22.60 Aligned_cols=83 Identities=19% Similarity=0.166 Sum_probs=44.9
Q ss_pred hhcCCcEEEEcCC-CChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCc-HHHHHHHHHHHHHHhccCCCceEEEEECC
Q 013962 23 ALSGRDLLGCAET-GSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPT-RELAQQIEKEVKALSRSLDSFKTAIVVGG 100 (433)
Q Consensus 23 ~~~~~~~l~~~~T-GsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~-~~L~~q~~~~~~~~~~~~~~~~~~~~~~~ 100 (433)
+++++.+||.+.+ |.|+..+ ..+.+. |.++++..-+ ....++...++.... +.++..+..+
T Consensus 1 ~L~gK~alITGas~GIG~aiA------~~la~~-------Ga~V~~~~r~~~~~~~~~~~~~~~~~----g~~~~~~~~D 63 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIA------TALAAQ-------GADIVLNGFGDAAEIEKVRAGLAAQH----GVKVLYDGAD 63 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHH------HHHHHT-------TCEEEEECCSCHHHHHHHHHHHHHHH----TSCEEEECCC
T ss_pred CCCcCEEEEeCCCCHHHHHHH------HHHHHC-------CCEEEEEeCCcHHHHHHHHHHHHHhc----CCcEEEEECC
Confidence 3567777774443 3666532 222222 7777776654 466666767666543 3455555555
Q ss_pred CCHHHHHHH-------hhCCCcEEEeccH
Q 013962 101 TNIAEQRSE-------LRGGVSIVVATPG 122 (433)
Q Consensus 101 ~~~~~~~~~-------~~~~~~Ivv~T~~ 122 (433)
-...+.... ..+..+++|-..+
T Consensus 64 v~~~~~v~~~~~~~~~~~G~iDiLVnnAG 92 (260)
T d1x1ta1 64 LSKGEAVRGLVDNAVRQMGRIDILVNNAG 92 (260)
T ss_dssp TTSHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEeecc
Confidence 543322221 2356778876644
No 371
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=22.98 E-value=74 Score=21.02 Aligned_cols=48 Identities=15% Similarity=0.211 Sum_probs=27.8
Q ss_pred eEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEE
Q 013962 244 LTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILV 297 (433)
Q Consensus 244 ~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv 297 (433)
++||.=.+....+.+...|...|+.+...+++ .+.++.+++..+++++
T Consensus 2 kILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~------~~al~~l~~~~~dlil 49 (121)
T d1zesa1 2 RILVVEDEAPIREMVCFVLEQNGFQPVEAEDY------DSAVNQLNEPWPDLIL 49 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEECSH------HHHHHHSSSSCCSEEE
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCEEEEECCh------HHHHHHHHccCCCEEE
Confidence 46666666666777777777777766554432 3344444554555443
No 372
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=22.83 E-value=99 Score=20.39 Aligned_cols=51 Identities=16% Similarity=0.275 Sum_probs=35.0
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEe
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVAT 299 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T 299 (433)
+++||.=........+...|...|+.+...+++ .+.++.+++...++++.-
T Consensus 4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~------~~a~~~l~~~~~dlii~D 54 (123)
T d1krwa_ 4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENG------NEVLAALASKTPDVLLSD 54 (123)
T ss_dssp CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSS------HHHHHHHTTCCCSEEEEC
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCH------HHHHHHHHhCCCCEEEeh
Confidence 346666666677788888898888887776654 245666666677666543
No 373
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=22.57 E-value=51 Score=23.35 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=16.5
Q ss_pred cEEEEcCCCChHHHHHHHHHHHHH
Q 013962 28 DLLGCAETGSGKTAAFTIPMIQHC 51 (433)
Q Consensus 28 ~~l~~~~TGsGKT~~~~~~~~~~~ 51 (433)
.++|.||+|+|||.. +..++..+
T Consensus 2 ki~I~G~~G~GKSTL-l~~i~~~l 24 (178)
T d1ye8a1 2 KIIITGEPGVGKTTL-VKKIVERL 24 (178)
T ss_dssp EEEEECCTTSSHHHH-HHHHHHHH
T ss_pred EEEEECCCCcHHHHH-HHHHHhcC
Confidence 378999999999963 34444443
No 374
>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.47 E-value=87 Score=19.57 Aligned_cols=43 Identities=14% Similarity=0.103 Sum_probs=33.6
Q ss_pred EEEEEeccc-------cHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHH
Q 013962 245 TIVFVERKT-------RCDEVSEALVAEGLHAVALHGGRNQSDRESALRD 287 (433)
Q Consensus 245 ~lvf~~~~~-------~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~ 287 (433)
+.||+.+.. .|.++...|...+++...+.-......+....+.
T Consensus 4 i~vy~ts~~~~~~~~~~~~r~~~lL~~~~I~y~~iDi~~d~~~~~~~~~~ 53 (93)
T d1t1va_ 4 LRVYSTSVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTL 53 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHHTTCCCEEEETTSCHHHHHHHHHH
T ss_pred EEEEEccCcCChhhHHHHHHHHHHHHHCCCceEEEEecCchhHHHHHHHh
Confidence 788887765 6999999999999998888877776666655443
No 375
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.97 E-value=1.3e+02 Score=22.94 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=42.8
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHHH-HHHHHHH--hcCCCcEEEEec
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSDR-ESALRDF--RNGSTNILVATD 300 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r-~~~~~~f--~~g~~~vlv~T~ 300 (433)
-.+++...+.+.++.+.+.+...+.++..+..+++..+. ...++.. +-|.+++||...
T Consensus 32 ~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinna 92 (244)
T d1yb1a_ 32 SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNA 92 (244)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECC
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeec
Confidence 347777777888899999999888888888887776644 4455544 347899998664
No 376
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.88 E-value=95 Score=24.08 Aligned_cols=58 Identities=19% Similarity=0.165 Sum_probs=42.3
Q ss_pred CeEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHH-HHHHHHHHhc--CCCcEEEEec
Q 013962 243 PLTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSD-RESALRDFRN--GSTNILVATD 300 (433)
Q Consensus 243 ~~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-r~~~~~~f~~--g~~~vlv~T~ 300 (433)
..+++.+.+.+.++.+.+.|+..+..+..+..+++..+ .....+.+.+ |.+++||..-
T Consensus 29 ~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNA 89 (275)
T d1wmaa1 29 GDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNA 89 (275)
T ss_dssp SEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECC
T ss_pred CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence 34888888888899999999998887777777776544 3333344432 7899999774
No 377
>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=21.47 E-value=1.6e+02 Score=22.32 Aligned_cols=80 Identities=18% Similarity=0.241 Sum_probs=45.7
Q ss_pred hcCCcEEEEcCC-CChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHHHhccCCCceEEEEECCCC
Q 013962 24 LSGRDLLGCAET-GSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKALSRSLDSFKTAIVVGGTN 102 (433)
Q Consensus 24 ~~~~~~l~~~~T-GsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (433)
++++-+||.+.+ |.|+..+ ..+.+. |..++++.-+..-+++..+++... +.++..+..+..
T Consensus 8 lenKvalITGas~GIG~a~a------~~la~~-------Ga~V~~~~r~~~~l~~~~~~l~~~-----g~~~~~~~~Dvt 69 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIA------KMLAKS-------VSHVICISRTQKSCDSVVDEIKSF-----GYESSGYAGDVS 69 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHH------HHHTTT-------SSEEEEEESSHHHHHHHHHHHHTT-----TCCEEEEECCTT
T ss_pred CCCCEEEEeCCCCHHHHHHH------HHHHHc-------CCEEEEEECCHHHHHHHHHHHHhc-----CCcEEEEEccCC
Confidence 356667776554 5666542 222222 778888877777777777777653 334555566654
Q ss_pred HHHHHHH-------hhCCCcEEEecc
Q 013962 103 IAEQRSE-------LRGGVSIVVATP 121 (433)
Q Consensus 103 ~~~~~~~-------~~~~~~Ivv~T~ 121 (433)
..+.... ..+..+++|...
T Consensus 70 ~~~~v~~~~~~~~~~~g~iDilvnna 95 (251)
T d2c07a1 70 KKEEISEVINKILTEHKNVDILVNNA 95 (251)
T ss_dssp CHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCceeeeecc
Confidence 3332221 235677777664
No 378
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
Probab=21.43 E-value=51 Score=23.62 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=32.0
Q ss_pred hcCCcEEEEcCCCChHHHHHHHHHHHHHhhcCCCCCCCCceEEEEcCcHHHHHHHHHHHHH
Q 013962 24 LSGRDLLGCAETGSGKTAAFTIPMIQHCVAQTPVGRGDGPLALVLAPTRELAQQIEKEVKA 84 (433)
Q Consensus 24 ~~~~~~l~~~~TGsGKT~~~~~~~~~~~~~~~~~~~~~~~~~lvl~P~~~L~~q~~~~~~~ 84 (433)
..+++++|.+.=|++|+.++.+ ... +..+.++..+.+-+.+..+.+..
T Consensus 16 ~~~k~vlIlGaGGaarai~~al--~~~-----------g~~i~I~nRt~~ka~~l~~~~~~ 63 (170)
T d1nyta1 16 RPGLRILLIGAGGASRGVLLPL--LSL-----------DCAVTITNRTVSRAEELAKLFAH 63 (170)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH--HHT-----------TCEEEEECSSHHHHHHHHHHTGG
T ss_pred CCCCEEEEECCcHHHHHHHHHh--ccc-----------ceEEEeccchHHHHHHHHHHHhh
Confidence 3578899999999999976532 221 55666666666666655554443
No 379
>d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]}
Probab=21.23 E-value=1.3e+02 Score=21.22 Aligned_cols=57 Identities=9% Similarity=0.125 Sum_probs=41.3
Q ss_pred eEEEEEecccc---HHHHHHHHHHCCCce--eeecCCCCHHHHHHHHHHHhcCCCcEEEEec
Q 013962 244 LTIVFVERKTR---CDEVSEALVAEGLHA--VALHGGRNQSDRESALRDFRNGSTNILVATD 300 (433)
Q Consensus 244 ~~lvf~~~~~~---~~~l~~~L~~~~~~~--~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~ 300 (433)
++.|..-+... ++...+.|+..++++ .+..+..+++.-.+.++......++|+|+-.
T Consensus 4 ~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~v~SAHR~p~~l~~~~~~~e~~~~~viIa~A 65 (159)
T d1u11a_ 4 VVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGA 65 (159)
T ss_dssp SEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEE
T ss_pred eEEEEeCCHhhHHHHHHHHHHHHHhCCceEEEEehHhhChHHHHHHHHHHHhcCCeEEEEEe
Confidence 46677766554 678888899988754 4445566777777888887777788888773
No 380
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=20.53 E-value=95 Score=21.24 Aligned_cols=57 Identities=16% Similarity=0.299 Sum_probs=31.3
Q ss_pred eEEEEEec-----cccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCCcEEEEecccc
Q 013962 244 LTIVFVER-----KTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGSTNILVATDVAS 303 (433)
Q Consensus 244 ~~lvf~~~-----~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~~vlv~T~~~~ 303 (433)
+++|++-| ...++.+++.+...+..+..++-. ......+...+.+-+ -|+++|++-.
T Consensus 4 K~lIvY~S~~GnT~~vA~~Ia~~l~~~g~~v~~~~~~--~~~~~~~~~~~~~~d-~ii~Gspt~~ 65 (149)
T d1ycga1 4 KAVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLS--VSDRNDVIKEILDAR-AVLVGSPTIN 65 (149)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGG--GSCHHHHHHHHHHCS-EEEEECCCBT
T ss_pred EEEEEEECCCcHHHHHHHHHHHHHHhcCCeeEEEEcc--ccchHHHhhhhhhCC-eEEEEeeccc
Confidence 35555543 345667777777888877776532 222233334443322 2777887654
No 381
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.39 E-value=1.2e+02 Score=20.54 Aligned_cols=44 Identities=7% Similarity=0.094 Sum_probs=30.1
Q ss_pred EEEEEe-ccccHHHHHHHHHHCCCceeeecCCCCHHHHHHHHHHHhcCCC
Q 013962 245 TIVFVE-RKTRCDEVSEALVAEGLHAVALHGGRNQSDRESALRDFRNGST 293 (433)
Q Consensus 245 ~lvf~~-~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~~~~f~~g~~ 293 (433)
+.+.+. +...++.+++.| |+ ..++++++++++...++.++.+..
T Consensus 40 v~ilTGD~~~~a~~ia~~l---gI--~~v~~~~~p~~k~~~v~~~q~~~~ 84 (135)
T d2b8ea1 40 VGMITGDNWRSAEAISREL---NL--DLVIAEVLPHQKSEEVKKLQAKEV 84 (135)
T ss_dssp EEEECSSCHHHHHHHHHHH---TC--SEEECSCCHHHHHHHHHHHTTTSC
T ss_pred EEEEcCcchhhhhHHHhhh---hh--hhhccccchhHHHHHHHHHHcCCE
Confidence 444432 334456666665 43 467889999999999999998763
No 382
>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=20.21 E-value=1.7e+02 Score=22.16 Aligned_cols=57 Identities=19% Similarity=0.239 Sum_probs=40.8
Q ss_pred eEEEEEeccccHHHHHHHHHHCCCceeeecCCCCHHH-HHHHHHHHhc--CCCcEEEEec
Q 013962 244 LTIVFVERKTRCDEVSEALVAEGLHAVALHGGRNQSD-RESALRDFRN--GSTNILVATD 300 (433)
Q Consensus 244 ~~lvf~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~-r~~~~~~f~~--g~~~vlv~T~ 300 (433)
.+++...+.+.++.+.+.++..+.++..+..+.+..+ ....++...+ |.+++||..-
T Consensus 27 ~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA 86 (255)
T d1gega_ 27 AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNA 86 (255)
T ss_dssp EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEecc
Confidence 3666666777788899999988888888887776554 3344444433 7899999764
No 383
>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.20 E-value=22 Score=25.42 Aligned_cols=37 Identities=11% Similarity=-0.027 Sum_probs=29.7
Q ss_pred CCCCeEEEEEeccccHHHHHHHHHHCCC-ceeeecCCC
Q 013962 240 HPFPLTIVFVERKTRCDEVSEALVAEGL-HAVALHGGR 276 (433)
Q Consensus 240 ~~~~~~lvf~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 276 (433)
.+..+++++|.+-..+...+..|...|. .+..+.|++
T Consensus 56 ~~~~~vv~~c~~g~rs~~~a~~l~~~G~~~v~~L~GG~ 93 (157)
T d1yt8a3 56 GTAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGT 93 (157)
T ss_dssp CCCSEEEEECSSSHHHHHHHHHHHHHHCSCEEEETTHH
T ss_pred ccCcceeeccCCcchHHHHHHHHhcccCceEEEecCCH
Confidence 4456799999998888888998988876 677788874
No 384
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=20.15 E-value=20 Score=29.43 Aligned_cols=14 Identities=29% Similarity=0.299 Sum_probs=12.3
Q ss_pred EEEEcCCCChHHHH
Q 013962 29 LLGCAETGSGKTAA 42 (433)
Q Consensus 29 ~l~~~~TGsGKT~~ 42 (433)
+.|.|+-|+|||..
T Consensus 7 I~IEG~iGsGKTTl 20 (329)
T d1e2ka_ 7 VYIDGPHGMGKTTT 20 (329)
T ss_dssp EEECSCTTSSHHHH
T ss_pred EEEECCcCCCHHHH
Confidence 67899999999964
Done!