Your job contains 1 sequence.
>013965
MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFE
KNFYVESPSVAAMSEREVEEYRQQREITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFF
EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAP
TRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESH
NTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLY
NPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQI
TRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCACVIIVLCT
FVLYLTLGPLSFT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 013965
(433 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 1676 1.8e-172 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 1405 9.6e-144 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 1272 1.2e-129 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 1255 7.6e-128 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 1234 1.3e-125 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 1207 9.2e-123 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 1203 2.4e-122 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 1196 1.3e-121 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 1194 2.2e-121 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 1193 2.8e-121 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 1187 1.2e-120 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 1187 1.2e-120 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 1187 1.2e-120 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 1187 1.2e-120 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 1187 1.2e-120 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 1187 1.2e-120 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 1187 1.2e-120 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 1181 5.2e-120 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 1159 1.1e-117 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 1159 1.1e-117 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 1159 1.1e-117 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 1159 1.1e-117 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 1159 1.1e-117 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 1159 1.1e-117 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 1158 1.4e-117 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 1158 1.4e-117 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 1157 1.8e-117 1
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 1152 6.2e-117 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 1152 6.2e-117 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 1117 3.2e-113 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 1106 4.6e-112 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 1091 1.8e-110 1
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 1062 2.1e-107 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 1062 2.1e-107 1
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 1013 3.3e-102 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 998 1.3e-100 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 991 7.1e-100 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 929 2.7e-93 1
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 830 1.0e-88 2
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 874 1.8e-87 1
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 829 1.0e-82 1
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 820 3.2e-81 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 813 5.2e-81 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 809 1.4e-80 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 809 1.4e-80 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 809 1.4e-80 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 809 1.4e-80 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 809 1.4e-80 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 809 1.4e-80 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 809 1.4e-80 1
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 803 6.0e-80 1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein... 801 9.7e-80 1
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p... 800 1.2e-79 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 798 2.0e-79 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 792 8.7e-79 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 791 1.1e-78 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 789 1.8e-78 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 786 3.8e-78 1
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 775 4.8e-78 2
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 785 4.8e-78 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 785 4.8e-78 1
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 785 4.8e-78 1
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 785 4.8e-78 1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 785 4.8e-78 1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 784 6.2e-78 1
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 784 6.2e-78 1
UNIPROTKB|G3MYF0 - symbol:LOC100300937 "Uncharacterized p... 782 1.0e-77 1
UNIPROTKB|Q9NXZ2 - symbol:DDX43 "Probable ATP-dependent R... 782 1.0e-77 1
UNIPROTKB|F1NVJ6 - symbol:DDX43 "Uncharacterized protein"... 781 1.3e-77 1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 779 2.1e-77 1
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 781 4.4e-77 1
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 775 5.5e-77 1
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 772 1.1e-76 1
UNIPROTKB|E1BII7 - symbol:DDX43 "Uncharacterized protein"... 772 1.1e-76 1
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 772 1.1e-76 1
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 767 1.3e-75 1
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 761 1.7e-75 1
UNIPROTKB|F1NQ09 - symbol:DDX43 "Uncharacterized protein"... 755 7.3e-75 1
UNIPROTKB|F1S0I6 - symbol:DDX43 "Uncharacterized protein"... 755 7.3e-75 1
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 751 1.9e-74 1
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 744 1.1e-73 1
UNIPROTKB|Q86TM3 - symbol:DDX53 "Probable ATP-dependent R... 742 1.7e-73 1
GENEDB_PFALCIPARUM|PFL1310c - symbol:PFL1310c "ATP-depend... 578 2.9e-72 2
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh... 717 7.7e-71 1
TAIR|locus:2034481 - symbol:STRS1 "STRESS RESPONSE SUPPRE... 712 2.6e-70 1
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 671 6.9e-69 2
CGD|CAL0005725 - symbol:PRP5 species:5476 "Candida albica... 687 1.2e-67 1
UNIPROTKB|Q5ADL0 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 687 1.2e-67 1
DICTYBASE|DDB_G0293064 - symbol:DDB_G0293064 species:4468... 685 1.9e-67 1
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 482 1.2e-66 2
SGD|S000003046 - symbol:DBP3 "RNA-Dependent ATPase, membe... 669 9.4e-66 1
SGD|S000000441 - symbol:PRP5 "RNA helicase in the DEAD-bo... 583 6.1e-65 2
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 658 1.4e-64 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 658 1.4e-64 1
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 527 6.1e-64 2
GENEDB_PFALCIPARUM|PFE0430w - symbol:PFE0430w "ATP-depend... 660 1.5e-63 1
UNIPROTKB|Q8I416 - symbol:PFE0430w "ATP-dependent RNA Hel... 660 1.5e-63 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 521 3.3e-63 2
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 644 4.2e-63 1
CGD|CAL0005460 - symbol:DBP3 species:5476 "Candida albica... 643 5.4e-63 1
WARNING: Descriptions of 814 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 1676 (595.0 bits), Expect = 1.8e-172, P = 1.8e-172
Identities = 317/370 (85%), Positives = 347/370 (93%)
Query: 39 KRDYDGAESPRKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPV 98
K+D DG ESPRKLDLDGLTPFEKNFYVESP+VAAM+ ITVEG+D+PKPV
Sbjct: 39 KKDNDGNESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPV 98
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
KSFRDVGFPDYV++E+ KAGF EPTPIQ+QGWPMA+KGRDLIGIAETGSGKTL+YLLPAI
Sbjct: 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
VHVNAQP LA GDGPIVLVLAPTRELAVQIQQE++KFG+SSKIK+TCIYGGVPKGPQVRD
Sbjct: 159 VHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRD 218
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
LQKGVEIVIATPGRLIDM+ES+NTNLRRVTYLVLDEADRMLDMGF+PQI+KI+S IRPDR
Sbjct: 219 LQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDR 278
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QTLYWSATWPKEVE L++++LYNPYKVIIGS DLKAN AIRQ VD++SESQKYNKLVKLL
Sbjct: 279 QTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLL 338
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
EDIMDGSRIL+F+DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF++GKSPIM
Sbjct: 339 EDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIM 398
Query: 399 TATDVAARGL 408
TATDVAARGL
Sbjct: 399 TATDVAARGL 408
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 1405 (499.6 bits), Expect = 9.6e-144, P = 9.6e-144
Identities = 268/379 (70%), Positives = 318/379 (83%)
Query: 39 KRDYDGAESPRKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPV 98
KR+ D P++ + L FEKNFYVESP+V AM+ I+VEGRDVPKP+
Sbjct: 106 KRELDSVSLPKQ-NFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPM 164
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K F+D FPD +++ I+K GF EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA+
Sbjct: 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 224
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
VHV+AQP L DGPIVL+LAPTRELAVQIQ+ES KFG S ++STCIYGG PKGPQ+RD
Sbjct: 225 VHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRD 284
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L++GVEIVIATPGRLIDMLE +TNL+RVTYLVLDEADRMLDMGFEPQI+KI+SQIRPDR
Sbjct: 285 LRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDR 344
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QTL WSATWP+EVE LARQ+L +PYK IIGS DLKAN +I Q ++IV +KYN+L+ LL
Sbjct: 345 QTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLL 404
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
+ +MDGS+ILIF++TK+GCDQ+TRQLRMDGWPAL+IHGDK+Q+ERD VL+EFK+G+SPIM
Sbjct: 405 KQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIM 464
Query: 399 TATDVAARGLG--NCACVI 415
TATDVAARGL + CV+
Sbjct: 465 TATDVAARGLDVKDIKCVV 483
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 1272 (452.8 bits), Expect = 1.2e-129, P = 1.2e-129
Identities = 242/359 (67%), Positives = 288/359 (80%)
Query: 52 DLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVM 111
DLD L FEK+FY E P V A S +TV+GRDVP+PV++F + GFP YV+
Sbjct: 93 DLDTLPKFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVL 152
Query: 112 QEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGD 171
E+ GF +PT IQ+QGWPMAL GRD++GIAETGSGKTL+Y LPAIVH+NAQP LAPGD
Sbjct: 153 SEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGD 212
Query: 172 GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
GPIVL+LAPTRELAVQIQ E +KFG SS+I++TC+YGGVPKGPQ+RDL +GVE+ IATPG
Sbjct: 213 GPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPG 272
Query: 232 RLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEV 291
RLIDMLE+ TNLRRVTYLVLDEADRMLDMGFEPQI+KI+SQIRPDRQT WSATWPKEV
Sbjct: 273 RLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEV 332
Query: 292 EHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMD--GSRILI 349
LA +L N +V IGS DL ANH I Q V+++SE +K ++++K LE IM+ G++ L+
Sbjct: 333 RQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLV 392
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
F TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL+EFK GKSPIM ATDVA+RG+
Sbjct: 393 FTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGI 451
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 1255 (446.8 bits), Expect = 7.6e-128, P = 7.6e-128
Identities = 239/361 (66%), Positives = 286/361 (79%)
Query: 52 DLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVM 111
D++ L FEK+FY E P V S + V+G DVPKPV++F + GFP YVM
Sbjct: 78 DINALPKFEKHFYKEHPDVTNRSQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVM 137
Query: 112 QEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGD 171
E+ GF PT IQ+QGWPMAL GRD++GIAETGSGKTL Y LPAIVH+NAQP LAPGD
Sbjct: 138 DEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGD 197
Query: 172 GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
GPIVL+LAPTRELAVQIQ E +KFG SS+I++TC+YGGVPKGPQ+RDL +GVE+ IATPG
Sbjct: 198 GPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPG 257
Query: 232 RLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEV 291
RLIDMLES TNLRRVTYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWPKEV
Sbjct: 258 RLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEV 317
Query: 292 EHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG----SRI 347
++A +L + +V IGS DL ANH I Q V++VSES+K +++++ +E +MDG ++I
Sbjct: 318 RNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRMIRHMEKVMDGKDSKNKI 377
Query: 348 LIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARG 407
LIF+ TK+ D+ITR LR DGWPALSIHGDK Q ERDWVL +FK GKSPIM ATDVA+RG
Sbjct: 378 LIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRG 437
Query: 408 L 408
+
Sbjct: 438 I 438
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 235/359 (65%), Positives = 281/359 (78%)
Query: 52 DLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVM 111
DL+ L FEKNFY E P VAA S +TV+G D+P P+ +F + GFPDYV+
Sbjct: 80 DLEQLPKFEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAGFPDYVL 139
Query: 112 QEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGD 171
QE+ GF +PTPIQ QGWPMAL GRD+IGIA TGSGKTL+Y LP+IVH+NAQP L GD
Sbjct: 140 QEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGD 199
Query: 172 GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
GPIVLVLAPTRELAVQIQ E +KFG SS+I++TC+YGG PKGPQ+RDL +GVEI IATPG
Sbjct: 200 GPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATPG 259
Query: 232 RLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEV 291
RLIDMLE+ TNL+RVTYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWPKEV
Sbjct: 260 RLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEV 319
Query: 292 EHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMD--GSRILI 349
+ L R YL +P +V IGS +L A+H I Q V+++ E K ++LVK LE ++ ++IL+
Sbjct: 320 QQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILV 379
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
F TK+ CD+IT LR DGWPAL+IHGDK Q ERDWVL EF+ GK+ IM ATDVAARG+
Sbjct: 380 FASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGI 438
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 1207 (429.9 bits), Expect = 9.2e-123, P = 9.2e-123
Identities = 226/359 (62%), Positives = 281/359 (78%)
Query: 52 DLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVM 111
+LD L FEKNFY E+P VA S ITV+GRD PKP+ F + FP YVM
Sbjct: 49 NLDELPKFEKNFYQENPDVARRSAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVM 108
Query: 112 QEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGD 171
I+K + +PTPIQAQGWP+AL G+D++GIA+TGSGKTL+YLLPAIVH+N QPFL GD
Sbjct: 109 DVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGD 168
Query: 172 GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
GPI LVLAPTRELA Q+QQ + ++G +S+IKSTCIYGG PKGPQ+RDL++GVEI IATPG
Sbjct: 169 GPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPG 228
Query: 232 RLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEV 291
RLID LE+ TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWPKEV
Sbjct: 229 RLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEV 288
Query: 292 EHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SRILI 349
LA +L ++ +G+ L ANH I Q VD+ ++ +K +KL++LLE+IM ++ +I
Sbjct: 289 RQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKLIRLLEEIMSEKENKTII 348
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
F++TK+ CD +TR++R DGWPA+ IHGDK+Q ERDWVL+EFK GK+PI+ ATDVA+RGL
Sbjct: 349 FVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVASRGL 407
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 231/359 (64%), Positives = 275/359 (76%)
Query: 52 DLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVM 111
+L L FEKNFYVE SV S +T+ G D+PKP+ +F + GFPDYV+
Sbjct: 66 ELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVL 125
Query: 112 QEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGD 171
E+ GF +PT IQ QGWPMAL GRD++GIA TGSGKTL+Y LP IVH+NAQP LAPGD
Sbjct: 126 NEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGD 185
Query: 172 GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
GPIVLVLAPTRELAVQIQ E +KFG SS+I++TC+YGGVPK Q+RDL +G EIVIATPG
Sbjct: 186 GPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPG 245
Query: 232 RLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEV 291
RLIDMLE TNL+RVTYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWPKEV
Sbjct: 246 RLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEV 305
Query: 292 EHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGS--RILI 349
+ LA YL +P +V +GS +L A+H I Q V++VS+ +K ++L K LE + + LI
Sbjct: 306 KQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLI 365
Query: 350 FMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
F TK+ CD IT+ LR DGWPAL+IHGDK Q ERDWVL EF+ G+SPIM ATDVAARG+
Sbjct: 366 FASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGI 424
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
Identities = 226/355 (63%), Positives = 282/355 (79%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEIS 115
L PF+K+FY E +V S I V G +VPKPV +F + GFP+YV++E+
Sbjct: 79 LIPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVK 138
Query: 116 KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIV 175
+ GF PTPIQ Q WPMA+ GRD++GI+ TGSGKTL+Y LPAIVH+NAQP L+PGDGPIV
Sbjct: 139 QLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIV 198
Query: 176 LVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 235
LVLAPTRELAVQIQQE TKFG SS+I++TC+YGGVP+GPQ+RDL +GVEI IATPGRL+D
Sbjct: 199 LVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLD 258
Query: 236 MLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLA 295
ML+S+ TNLRRVTYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQT+ +SATWPKEV+ LA
Sbjct: 259 MLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRLA 318
Query: 296 RQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SRILIFMDT 353
R YL + +V +GS DL A+H I+Q V++V + K +L K +E+++ +++LIF T
Sbjct: 319 RDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRDNKVLIFTGT 378
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
K+ D ITR LR DGWPAL+IHGDK+Q ERDWVL+EF+ GKSPIM ATDVA+RG+
Sbjct: 379 KRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGI 433
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 229/362 (63%), Positives = 280/362 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K DLD L FEKNFY E+P V MS ITV G PKPV +F FP
Sbjct: 45 KKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFPQ 104
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
YVM + + F EPT IQAQG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 105 YVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLE 164
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + +G SS+IKSTC+YGG PKGPQ+RDL++GVEI IA
Sbjct: 165 RGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIA 224
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 225 TPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 284
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGSR 346
KEV LA +L + ++ IG+ +L ANH I Q VD+ E++K NKL++L+E+IM ++
Sbjct: 285 KEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEEIMAEKENK 344
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
+IF++TKK CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+R
Sbjct: 345 TIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASR 404
Query: 407 GL 408
GL
Sbjct: 405 GL 406
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 229/364 (62%), Positives = 281/364 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 41 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 100
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 160
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 161 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 220
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 221 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 280
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 281 PKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 340
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 341 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 400
Query: 406 RGLG 409
RGLG
Sbjct: 401 RGLG 404
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 228/363 (62%), Positives = 280/363 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 41 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 100
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 160
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 161 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 220
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 221 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 280
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 281 PKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 340
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 341 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 400
Query: 406 RGL 408
RGL
Sbjct: 401 RGL 403
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 228/363 (62%), Positives = 280/363 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 41 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 100
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 160
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 161 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 220
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 221 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 280
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 281 PKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 340
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 341 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 400
Query: 406 RGL 408
RGL
Sbjct: 401 RGL 403
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 228/363 (62%), Positives = 280/363 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 122 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 181
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 182 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 241
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 242 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 301
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 302 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 361
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 362 PKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 421
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 422 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 481
Query: 406 RGL 408
RGL
Sbjct: 482 RGL 484
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 228/363 (62%), Positives = 280/363 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 120 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 179
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 180 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 239
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 240 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 299
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 300 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 359
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 360 PKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 419
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 420 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 479
Query: 406 RGL 408
RGL
Sbjct: 480 RGL 482
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 228/363 (62%), Positives = 280/363 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 120 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 179
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 180 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 239
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 240 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 299
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 300 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 359
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 360 PKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 419
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 420 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 479
Query: 406 RGL 408
RGL
Sbjct: 480 RGL 482
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 228/363 (62%), Positives = 280/363 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 122 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 181
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 182 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 241
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 242 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 301
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 302 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 361
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 362 PKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 421
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 422 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 481
Query: 406 RGL 408
RGL
Sbjct: 482 RGL 484
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 228/363 (62%), Positives = 280/363 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 41 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 100
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 160
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 161 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 220
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 221 ATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 280
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 281 PKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 340
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 341 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 400
Query: 406 RGL 408
RGL
Sbjct: 401 RGL 403
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
Identities = 224/363 (61%), Positives = 280/363 (77%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRD-VPKPVKSFRDVGFP 107
+K DL+ L FEKNFYVE P VA ++ IT+ G + PKPV +F FP
Sbjct: 39 KKWDLNELPKFEKNFYVEHPEVARLTPYEVEELRRKKEITIRGMEGCPKPVFAFHQCSFP 98
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 99 QYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 158
Query: 168 APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVI 227
GDGPI LVLAPTRELA Q+QQ + +G S++KSTCIYGG PKGPQ+RDL++GVEI I
Sbjct: 159 ERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICI 218
Query: 228 ATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATW 287
ATPGRLID LE+ TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATW
Sbjct: 219 ATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 278
Query: 288 PKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--DGS 345
PKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM +
Sbjct: 279 PKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKEN 338
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
+ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDVA+
Sbjct: 339 KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVAS 398
Query: 406 RGL 408
RGL
Sbjct: 399 RGL 401
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 219/362 (60%), Positives = 275/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 284 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 343
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
Query: 407 GL 408
GL
Sbjct: 404 GL 405
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 219/362 (60%), Positives = 275/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 101 KKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPA 160
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 161 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 220
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 221 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 280
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 281 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 340
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 341 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 400
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 401 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 460
Query: 407 GL 408
GL
Sbjct: 461 GL 462
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 219/362 (60%), Positives = 275/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 284 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 343
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
Query: 407 GL 408
GL
Sbjct: 404 GL 405
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 219/362 (60%), Positives = 275/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 284 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 343
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
Query: 407 GL 408
GL
Sbjct: 404 GL 405
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 219/362 (60%), Positives = 275/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 284 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 343
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
Query: 407 GL 408
GL
Sbjct: 404 GL 405
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 219/362 (60%), Positives = 275/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 284 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 343
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
Query: 407 GL 408
GL
Sbjct: 404 GL 405
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 217/362 (59%), Positives = 274/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P V + +TV G + PKP+ +F + FP
Sbjct: 32 KKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPA 91
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM+ I + F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 92 NVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 151
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 152 RGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 211
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE+ TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 212 TPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 271
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + IG+ +L ANH I Q VD+ + +K +KL++L+E+IM ++
Sbjct: 272 KEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENK 331
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 332 TIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 391
Query: 407 GL 408
GL
Sbjct: 392 GL 393
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
Identities = 217/362 (59%), Positives = 274/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P V + +TV G + PKP+ +F + FP
Sbjct: 40 KKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFYEANFPA 99
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM+ I + F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 100 NVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 159
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 160 RGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 219
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE+ TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 220 TPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 279
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + IG+ +L ANH I Q VD+ + +K +KL++L+E+IM ++
Sbjct: 280 KEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENK 339
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 340 TIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 399
Query: 407 GL 408
GL
Sbjct: 400 GL 401
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
Identities = 219/362 (60%), Positives = 274/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K DLD FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWDLDEPPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 284 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 343
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
Query: 407 GL 408
GL
Sbjct: 404 GL 405
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 218/362 (60%), Positives = 274/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVE IA
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENCIA 223
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 284 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 343
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+R
Sbjct: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASR 403
Query: 407 GL 408
GL
Sbjct: 404 GL 405
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 218/362 (60%), Positives = 274/362 (75%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IA
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIA 223
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWP
Sbjct: 224 TPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP 283
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SR 346
KEV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 284 KEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENK 343
Query: 347 ILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAAR 406
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ER WVL+EFK GK+PI+ ATDVA+R
Sbjct: 344 TIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATDVASR 403
Query: 407 GL 408
GL
Sbjct: 404 GL 405
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 220/368 (59%), Positives = 271/368 (73%)
Query: 44 GAESPRKLDLD-GLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFR 102
GA P+ + + LTPF KNFY SV A + IT++G VP P F
Sbjct: 101 GAHLPKIVWSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFE 160
Query: 103 DVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVN 162
+ GFPDYVM EI K GF +PT IQAQGWP+A+ GRDL+G+A+TGSGKTLAY+LPA+VH+N
Sbjct: 161 EGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVHIN 220
Query: 163 AQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKG 222
QP L GDGPI LVLAPTRELA QIQQ + +FG+++ +++TCI+GG PKG Q RDL++G
Sbjct: 221 NQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERG 280
Query: 223 VEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLY 282
VEIVIATPGRLID LE T+L+R TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQ L
Sbjct: 281 VEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLM 340
Query: 283 WSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM 342
WSATWPKEV LA ++L N +V IGS L ANH I Q VD+ E++K KL+KLL DI
Sbjct: 341 WSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLLTDIS 400
Query: 343 --DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTA 400
+ ++ +IF++TKK D+ITR + GW A +IHGDKSQ ERD+VLS F+ G+ I+ A
Sbjct: 401 AENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVA 460
Query: 401 TDVAARGL 408
TDVAARGL
Sbjct: 461 TDVAARGL 468
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 214/367 (58%), Positives = 274/367 (74%)
Query: 42 YDGAESPRKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSF 101
+ A SP DL L FEKNFY+E P V+ + +TV+GR+VP P+ F
Sbjct: 327 FGSALSPISWDLSKLPRFEKNFYLEHPDVSKFTQEEIEKFRASFQMTVKGREVPPPIMQF 386
Query: 102 RDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHV 161
FP Y+M+EI AGF PTPIQ+Q WP+ALKGRD+IG+A+TGSGKTLA+LLP+IVH+
Sbjct: 387 TQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHI 446
Query: 162 NAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQK 221
NAQP L DGPIVLVLAPTRELA+QIQ+E+ KFG +S+I +TC+YGG K QV L+K
Sbjct: 447 NAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKK 506
Query: 222 GVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTL 281
GVEIVIATPGRLID+LES TNLRRVTYLVLDEADRMLDMGFEPQI+KI+SQIRPDRQTL
Sbjct: 507 GVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTL 566
Query: 282 YWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDI 341
+SATWPKEV+ LA +L + +V IGS ++ ANH +RQ V++ + +K +++ L +
Sbjct: 567 MFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSV 626
Query: 342 MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTAT 401
++++F +T+KG D + R L+ G+ ++ IHG+KSQ ERD+VLS+FK G PIM AT
Sbjct: 627 GRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIAT 686
Query: 402 DVAARGL 408
DVA+RGL
Sbjct: 687 DVASRGL 693
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 1091 (389.1 bits), Expect = 1.8e-110, P = 1.8e-110
Identities = 219/364 (60%), Positives = 270/364 (74%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
R +D L PF+KNFY E P+VA S ITV G+ VP P++ F +V PD
Sbjct: 232 RPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQ-VPNPIQDFSEVHLPD 290
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
YVM+EI + G+ PT IQAQGWP+A+ G + +GIA+TGSGKTL Y+LPAIVH+N Q L
Sbjct: 291 YVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQ 350
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
GDGPI LVLAPTRELA QIQQ +T+FG+SS +++TC++GG PKG Q+RDLQ+G EIVIA
Sbjct: 351 RGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIA 410
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGRLID L + +TNL+R TYLVLDEADRMLDMGFEPQI+KI+SQIRPDRQTL WSATWP
Sbjct: 411 TPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWP 470
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGS--- 345
KEV+ LA +L N ++ IGS +L ANH IRQ VD+ E K KL LL DI D S
Sbjct: 471 KEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESP 530
Query: 346 -RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVA 404
+I+IF++TK+ D + R +R G +IHGDKSQ+ERD+VL EF++GKS I+ ATDVA
Sbjct: 531 GKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVA 590
Query: 405 ARGL 408
ARGL
Sbjct: 591 ARGL 594
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 212/356 (59%), Positives = 258/356 (72%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITV-EGRDVPKPVKSFRDVGFPDYVMQEI 114
L PFEKNFY E ++ +S IT+ EG +VPKPV S +GFPDYV++ +
Sbjct: 69 LVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSL 128
Query: 115 SKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPI 174
PTPIQ QGWP+AL G+D+IG AETGSGKTLA++LPA VH+ AQP L GDGPI
Sbjct: 129 KNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPI 188
Query: 175 VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLI 234
VLVLAPTRELA QI+QE KF SKI++TC YGGVPK Q+ L++GV I+IA PGRLI
Sbjct: 189 VLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLI 248
Query: 235 DMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHL 294
D+LE + TNL RVTYLVLDEAD+MLDMGFE QI+KI+ QIRPDRQTL WSATWPKEV+ L
Sbjct: 249 DLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQAL 308
Query: 295 ARQYLYN-PYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM-DGSRILIFMD 352
A+ P +V +GS L A +I+Q + ++ E +K L LL+ I D RI++F++
Sbjct: 309 AKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVE 368
Query: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
TKK D IT+ LR+DG PAL IHGDK Q ER WVL+EFK GKSPIM ATDVA+RGL
Sbjct: 369 TKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGL 424
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
Identities = 212/356 (59%), Positives = 258/356 (72%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITV-EGRDVPKPVKSFRDVGFPDYVMQEI 114
L PFEKNFY E ++ +S IT+ EG +VPKPV S +GFPDYV++ +
Sbjct: 69 LVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSL 128
Query: 115 SKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPI 174
PTPIQ QGWP+AL G+D+IG AETGSGKTLA++LPA VH+ AQP L GDGPI
Sbjct: 129 KNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPI 188
Query: 175 VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLI 234
VLVLAPTRELA QI+QE KF SKI++TC YGGVPK Q+ L++GV I+IA PGRLI
Sbjct: 189 VLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLI 248
Query: 235 DMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHL 294
D+LE + TNL RVTYLVLDEAD+MLDMGFE QI+KI+ QIRPDRQTL WSATWPKEV+ L
Sbjct: 249 DLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQAL 308
Query: 295 ARQYLYN-PYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM-DGSRILIFMD 352
A+ P +V +GS L A +I+Q + ++ E +K L LL+ I D RI++F++
Sbjct: 309 AKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVE 368
Query: 353 TKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
TKK D IT+ LR+DG PAL IHGDK Q ER WVL+EFK GKSPIM ATDVA+RGL
Sbjct: 369 TKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGL 424
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 209/365 (57%), Positives = 259/365 (70%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDV-PKPVKSFRDVGFP 107
+K DL L FEKNFYVE P VA ++ ITV G DV PKPV +F FP
Sbjct: 41 KKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFP 100
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
YVM + F EPTPIQ QG+P+AL GRD++GIA+TGSGKTLAYLLPAIVH+N QP+L
Sbjct: 101 QYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 160
Query: 168 APGDGPIVLVLAPTRELAVQIQQEST--KFGASSKIKSTCIYGGVPKGPQVRDLQKGVEI 225
GDGPIV VL P + + T KF SS + C G KG ++ L + VEI
Sbjct: 161 ERGDGPIVSVL-PFFSTLFSVYRGGTDFKFKCSS-LFWVCFLGQSLKGQRLEWLSQCVEI 218
Query: 226 VIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSA 285
IATPGR ID LES TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSA
Sbjct: 219 CIATPGR-IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 277
Query: 286 TWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--D 343
TWPKEV LA +L + ++ +G+ +L ANH I Q VD+ ES+K +KL++L+E+IM
Sbjct: 278 TWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEK 337
Query: 344 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 403
++ +IF++TK+ CD +TR++R DGWPA+ IHGDKSQ ERDWVL+EF++GK+PI+ ATDV
Sbjct: 338 ENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDV 397
Query: 404 AARGL 408
A+RGL
Sbjct: 398 ASRGL 402
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 998 (356.4 bits), Expect = 1.3e-100, P = 1.3e-100
Identities = 199/372 (53%), Positives = 260/372 (69%)
Query: 43 DGAESPRKLDLD----GLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPV 98
+G+ R D+D LTP EK+FY E+ +V+ +T+EGR VP+PV
Sbjct: 70 NGSAGGRLRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPV 129
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
F + P + E+ F +PT IQ+ WP+A+ GRD+I IA+TGSGKTLA++LPA+
Sbjct: 130 FEFNEAPLPGQI-HELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPAL 188
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
VH+ Q G+GP VLVL PTRELA Q+Q+ S F S +K TC++GG KGPQ RD
Sbjct: 189 VHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARD 248
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L++GV+IV+ATPGRL+D L++ TN+++ +YLVLDEADRMLDMGFEPQIKKI+ QIRPDR
Sbjct: 249 LERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDR 308
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QTL +SATWPKEV LA + + + +GS +L ANH I Q VDI+ E K KL++LL
Sbjct: 309 QTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELL 368
Query: 339 EDIMDGS--RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
IM+ + +IF++TK+ D++TR +R DGWP L IHGDK+Q ERDWVL EFKAGK+P
Sbjct: 369 NHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTP 428
Query: 397 IMTATDVAARGL 408
IM ATDVAARGL
Sbjct: 429 IMLATDVAARGL 440
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 201/364 (55%), Positives = 260/364 (71%)
Query: 54 DGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQE 113
+ L PF K+FY P+ A S ITV G ++P PV SF + P +V++E
Sbjct: 192 ENLEPFLKDFYNIHPNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEE 251
Query: 114 ISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGP 173
+ + GF +PT IQ+QGWP+AL GRDL+GIA+TGSGKTLAY+LPAIVH+ QP + G+GP
Sbjct: 252 MKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEGP 311
Query: 174 IVLVLAPTRELAVQIQQESTKFGASSK--IKSTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
I LVLAPTRELA QIQ +G K I+ TCI+GG K PQ RDL +GVE++IATPG
Sbjct: 312 IALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATPG 371
Query: 232 RLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEV 291
RLID LE+ NTNL+R TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQ + WSATWPKEV
Sbjct: 372 RLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVVMWSATWPKEV 431
Query: 292 EHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM-------DG 344
+ LA +L + ++ IGS +L ANH IRQ V+I +E +K +LV LL +I +G
Sbjct: 432 QALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRLVCLLNEISPIKNSGNNG 491
Query: 345 SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVA 404
++I++F++TK + I + +R +G+ A SIHGDK+Q ERD VL +F+ GKS I+ ATDVA
Sbjct: 492 NKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIATDVA 551
Query: 405 ARGL 408
+RGL
Sbjct: 552 SRGL 555
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 183/346 (52%), Positives = 245/346 (70%)
Query: 65 VESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTP 124
V PS A S ITV G VP P+ SF GFP +++E+ AGF PTP
Sbjct: 124 VPLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTP 183
Query: 125 IQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGD-GPIVLVLAPTRE 183
IQAQ WP+A++GRD++ IA+TGSGKTL YL+P +H+ Q GP +LVL+PTRE
Sbjct: 184 IQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL--QRIRNDSRMGPTILVLSPTRE 241
Query: 184 LAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTN 243
LA QIQ+E+ KFG SS+I TC+YGG PKGPQ+RDL++G +IV+ATPGRL D+LE +
Sbjct: 242 LATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRIS 301
Query: 244 LRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPY 303
LR+++YLVLDEADRMLDMGFEPQI+KI+ +I RQTL ++ATWPK V +A L NP
Sbjct: 302 LRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPA 361
Query: 304 KVIIGSPD-LKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITR 362
+V IG+ D L AN +I QH+++V+ +K +L ++L GS+++IF TK+ CDQ+TR
Sbjct: 362 QVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVIIFCSTKRMCDQLTR 421
Query: 363 QLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
L + A +IHGDKSQ ERD VL++F++G++P++ ATDVAARGL
Sbjct: 422 NLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAARGL 466
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 830 (297.2 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 155/241 (64%), Positives = 195/241 (80%)
Query: 170 GDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIAT 229
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IAT
Sbjct: 86 GDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIAT 145
Query: 230 PGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPK 289
PGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWPK
Sbjct: 146 PGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 205
Query: 290 EVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SRI 347
EV LA +L + + IG+ +L ANH I Q VD+ + +K KL++L+E+IM ++
Sbjct: 206 EVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKT 265
Query: 348 LIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARG 407
++F++TK+ CD++TR++R DGWPA+ IHGDKSQ ERDWVL+EFK GK+PI+ ATDVA+RG
Sbjct: 266 IVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRG 325
Query: 408 L 408
L
Sbjct: 326 L 326
Score = 75 (31.5 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVP 95
+K +LD L FEKNFY E P +A + ITV G D P
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRG-DGP 89
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 174/346 (50%), Positives = 241/346 (69%)
Query: 64 YVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPT 123
+V SP V +S +T G ++P P +F G P +++E+ AGF PT
Sbjct: 402 FVTSPDVPHLSPVEIYRKQHE--VTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPT 459
Query: 124 PIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRE 183
PIQAQ WP+AL+ RD++ IA+TGSGKTL YL+PA + + +GP VL+LAPTRE
Sbjct: 460 PIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLR-HCRNDSRNGPTVLILAPTRE 518
Query: 184 LAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTN 243
LA QIQ E+ +FG SS+I TC+YGG PKGPQ+++L++G +IV+ATPGRL D+LE +
Sbjct: 519 LATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMID 578
Query: 244 LRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPY 303
++V+ LVLDEADRMLDMGFEPQI+KI+++I P RQTL ++ATWPKEV +A L NP
Sbjct: 579 FQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPV 638
Query: 304 KVIIGSPD-LKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITR 362
+V IG D L AN AI Q+V++V + +K +L ++L GS+++IF TK+ CD + R
Sbjct: 639 QVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLAR 698
Query: 363 QLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ + A+ IHGDK+Q ERDWVL++F++GKS ++ ATDVAARGL
Sbjct: 699 SVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGL 743
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 162/310 (52%), Positives = 229/310 (73%)
Query: 105 GFPDYVM-----QEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
GF Y++ + + AGF P+PIQAQ WP+A++ RD++ IA+TGSGKTL YL+P +
Sbjct: 230 GFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 289
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
H+ + GP +LVL+PTRELA QIQ E+ KFG SSKI C+YGG PKGPQ++++
Sbjct: 290 HLQ-RIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEI 348
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
++GV+IV+ATPGRL D+LE +L +V+YLVLDEADRMLDMGFEPQI+KI++++ RQ
Sbjct: 349 ERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQ 408
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPD-LKANHAIRQHVDIVSESQKYNKLVKLL 338
TL ++ATWPKEV +A L NP +V IG+ D L AN +I Q +++++ +K+++L ++L
Sbjct: 409 TLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQIL 468
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
GS+I+IF TK+ CDQ+ R L + A +IHGDKSQAERD VL++F++G++P++
Sbjct: 469 RSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVL 527
Query: 399 TATDVAARGL 408
ATDVAARGL
Sbjct: 528 VATDVAARGL 537
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 820 (293.7 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 162/374 (43%), Positives = 241/374 (64%)
Query: 50 KLDLDGLT--PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGF 106
K+D +T PF KNFYVE P + M+ I V+G+ PKP+K++ G
Sbjct: 458 KIDHSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGV 517
Query: 107 PDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
M+ + + GF +PTPIQ Q P + GRDLIGIA+TGSGKTLA++LP H+ QP
Sbjct: 518 SKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPS 577
Query: 167 LAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIV 226
+ GDG I +++APTREL +QI ++ KF S ++ C+YGG Q+ +L++G EI+
Sbjct: 578 MEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEII 637
Query: 227 IATPGRLIDMLESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYW 283
+ TPGR+IDML +++ TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +
Sbjct: 638 VCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMF 697
Query: 284 SATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMD 343
SAT+P+++E LAR+ L P +VI+G + + QHV I+++ K+ KL++LL +
Sbjct: 698 SATFPRQMEALARRILKKPIEVIVGGRSVVCKE-VEQHVVILNDDAKFFKLLELLGIYQE 756
Query: 344 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 403
I++F+D ++ D + R L +P +S+HG Q +RD + +FK+GK ++ AT V
Sbjct: 757 AGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSV 816
Query: 404 AARGLGNCACVIIV 417
AARGL +++V
Sbjct: 817 AARGLDVKDLILVV 830
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
Identities = 159/364 (43%), Positives = 237/364 (65%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A M+ ITV+G+ PKP+K++ G ++ + K
Sbjct: 329 PFRKNFYVEVPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKK 388
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
G+ +PTPIQ+Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G+GPI +
Sbjct: 389 HGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEEGEGPIAV 448
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF + ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 449 IMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 508
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L ++N TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 509 LAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 568
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + QHV ++ E K+ KL++LL + ++IF+D
Sbjct: 569 LARRILSKPIEVQVGGRSVVCSD-VEQHVIVIEEENKFLKLLELLGHYQEKGSVIIFVDK 627
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P LS+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 628 QEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKQL 687
Query: 414 VIIV 417
+++V
Sbjct: 688 MLVV 691
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/364 (43%), Positives = 236/364 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A MS ITV+G+ PKP+KS+ G ++ + K
Sbjct: 330 PFRKNFYVEVPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKK 389
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G+GPI +
Sbjct: 390 HGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAV 449
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF + ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 450 IMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L +++ TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 510 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 569
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + Q V ++ E +K+ KL++LL + ++IF+D
Sbjct: 570 LARRILSKPIEVQVGGRSVVCSD-VEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDK 628
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P +S+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 629 QEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHL 688
Query: 414 VIIV 417
+++V
Sbjct: 689 ILVV 692
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/364 (43%), Positives = 236/364 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A MS ITV+G+ PKP+KS+ G ++ + K
Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKK 389
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G+GPI +
Sbjct: 390 HGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAV 449
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF + ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 450 IMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L +++ TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 510 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 569
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + Q V ++ E +K+ KL++LL + ++IF+D
Sbjct: 570 LARRILSKPIEVQVGGRSVVCSD-VEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDK 628
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P +S+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 629 QEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHL 688
Query: 414 VIIV 417
+++V
Sbjct: 689 ILVV 692
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/364 (43%), Positives = 236/364 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A MS ITV+G+ PKP+KS+ G ++ + K
Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKK 389
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G+GPI +
Sbjct: 390 HGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAV 449
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF + ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 450 IMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L +++ TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 510 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 569
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + Q V ++ E +K+ KL++LL + ++IF+D
Sbjct: 570 LARRILSKPIEVQVGGRSVVCSD-VEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDK 628
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P +S+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 629 QEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHL 688
Query: 414 VIIV 417
+++V
Sbjct: 689 ILVV 692
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/364 (43%), Positives = 236/364 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A MS ITV+G+ PKP+KS+ G ++ + K
Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKK 389
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G+GPI +
Sbjct: 390 HGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAV 449
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF + ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 450 IMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L +++ TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 510 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 569
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + Q V ++ E +K+ KL++LL + ++IF+D
Sbjct: 570 LARRILSKPIEVQVGGRSVVCSD-VEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDK 628
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P +S+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 629 QEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHL 688
Query: 414 VIIV 417
+++V
Sbjct: 689 ILVV 692
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/364 (43%), Positives = 236/364 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A MS ITV+G+ PKP+KS+ G ++ + K
Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKK 389
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G+GPI +
Sbjct: 390 HGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAV 449
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF + ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 450 IMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L +++ TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 510 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 569
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + Q V ++ E +K+ KL++LL + ++IF+D
Sbjct: 570 LARRILSKPIEVQVGGRSVVCSD-VEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDK 628
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P +S+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 629 QEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHL 688
Query: 414 VIIV 417
+++V
Sbjct: 689 ILVV 692
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/364 (43%), Positives = 236/364 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A MS ITV+G+ PKP+KS+ G ++ + K
Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKK 389
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G+GPI +
Sbjct: 390 HGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAV 449
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF + ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 450 IMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L +++ TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 510 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 569
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + Q V ++ E +K+ KL++LL + ++IF+D
Sbjct: 570 LARRILSKPIEVQVGGRSVVCSD-VEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDK 628
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P +S+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 629 QEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHL 688
Query: 414 VIIV 417
+++V
Sbjct: 689 ILVV 692
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 158/364 (43%), Positives = 236/364 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A MS ITV+G+ PKP+KS+ G ++ + K
Sbjct: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKK 389
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
G+ +PTPIQ Q P + GRDLIGIA+TGSGKT+A+LLP H+ Q L G+GPI +
Sbjct: 390 HGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAV 449
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF + ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 450 IMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L +++ TNLRRVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 510 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 569
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + Q V ++ E +K+ KL++LL + ++IF+D
Sbjct: 570 LARRILSKPIEVQVGGRSVVCSD-VEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDK 628
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P +S+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 629 QEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHL 688
Query: 414 VIIV 417
+++V
Sbjct: 689 ILVV 692
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
Identities = 175/383 (45%), Positives = 242/383 (63%)
Query: 41 DYDG--AESPRKLDLDGLTP----------FEKNFYVESPSVAAMSXXXXXXXXXXXXIT 88
D DG P+K D+D L P FEKNFY + +AA+ +
Sbjct: 199 DEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEKNFYTQHDDIAALDDEQVRELRRTLGVK 258
Query: 89 VEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSG 148
V G PKPV SF GF + +++ + KA + +PTPIQAQ P AL GRD+IGIA+TGSG
Sbjct: 259 VTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSG 318
Query: 149 KTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYG 208
KT A++ P ++HV Q L PGDGPI L+LAPTREL++QI E+ KFG + C YG
Sbjct: 319 KTAAFIWPMLMHVMDQKQLKPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYG 378
Query: 209 GVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIK 268
G K Q + L++G EI++ATPGR+IDM++ TNLRRVT+LVLDEADRM MGFEPQ++
Sbjct: 379 GGSKWEQSKALEQGAEIIVATPGRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVR 438
Query: 269 KILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDL-KANHAIRQHVDIVSE 327
I + +RPDRQ L +SAT+ K +E LAR L +P +++ G DL +AN I Q V +
Sbjct: 439 SICNHVRPDRQCLMFSATFKKRIERLARDVLSDPVRIVQG--DLNEANQDITQSVYVFPN 496
Query: 328 S-QKYNKLV-KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 385
QK+N L+ L++ + +GS +LIF+ K + ++ L + + L +HGD QA+R+
Sbjct: 497 PLQKWNWLLCHLVKFLSEGS-VLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNK 555
Query: 386 VLSEFKAGKSPIMTATDVAARGL 408
V+++FK + I+ ATDVAARGL
Sbjct: 556 VITQFKRKECDILVATDVAARGL 578
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 166/371 (44%), Positives = 241/371 (64%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITV-------EGRDVPKPVKSF 101
RK DL P KNFYVE+ + ++MS + E R +P P+ F
Sbjct: 160 RKWDLP---PIHKNFYVETKATSSMSQVQVDIWRKENFNVMCNDLKDGEKRPIPNPICKF 216
Query: 102 RDV-G-FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
D G +P+ +M+ I KAGF +PTPIQ+Q WP+ L+G DLIGIA+TG+GKTL+YL+P +
Sbjct: 217 EDAFGPYPE-LMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFI 275
Query: 160 HVNAQPFLAPG--DGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
H+N+QP ++ G +GP +LVL PTRELA+Q+ E +K+ +KS CIYGG + Q++
Sbjct: 276 HLNSQP-VSRGKRNGPGMLVLTPTRELALQVGAECSKYSYKG-LKSVCIYGGGNRKGQIQ 333
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
D+ KGV+I+IATPGRL D+ ++ NLR +TYLVLDEAD+MLD+GFE QI KIL +RPD
Sbjct: 334 DIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPD 393
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
RQT+ SATWP + LA YL P V +G+ DL A ++Q++ I +E +K + +
Sbjct: 394 RQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEF 453
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L+ + ++++F+ K D ++ L + G P S+HGD+ Q++R+ L +FK GK I
Sbjct: 454 LQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKI 513
Query: 398 MTATDVAARGL 408
+ ATD+A+RGL
Sbjct: 514 LIATDLASRGL 524
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 163/364 (44%), Positives = 238/364 (65%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITV-------EGRDVPKPVKSFRDV-G-F 106
L P KNFYVE+ + ++MS + E R +P P+ F D G +
Sbjct: 173 LPPIHKNFYVETKATSSMSQVQVDIWRKENFNVMCNDLKDGEKRPIPNPICKFEDAFGPY 232
Query: 107 PDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
P+ +M+ I KAGF +PTPIQ+Q WP+ L+G DLIGIA+TG+GKTL+YL+P +H+N+QP
Sbjct: 233 PE-LMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLNSQP- 290
Query: 167 LAPG--DGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVE 224
++ G +GP +LVL PTRELA+Q+ E +K+ +KS CIYGG + Q++D+ KGV+
Sbjct: 291 VSRGKRNGPGMLVLTPTRELALQVGAECSKYSYKG-LKSVCIYGGGNRKGQIQDIMKGVD 349
Query: 225 IVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWS 284
I+IATPGRL D+ ++ NLR +TYLVLDEAD+MLD+GFE QI KIL +RPDRQT+ S
Sbjct: 350 IIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTIMTS 409
Query: 285 ATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG 344
ATWP + LA YL P V +G+ DL A ++Q++ I +E +K + + L+ +
Sbjct: 410 ATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSLSPK 469
Query: 345 SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVA 404
++++F+ K D ++ L + G P S+HGD+ Q++R+ L +FK GK I+ ATD+A
Sbjct: 470 DKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILIATDLA 529
Query: 405 ARGL 408
+RGL
Sbjct: 530 SRGL 533
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 155/364 (42%), Positives = 236/364 (64%)
Query: 58 PFEKNFYVESPSVAAMS-XXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF KNFYVE P +A MS I+V+G+ PKP+K++ G V+ + K
Sbjct: 315 PFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKK 374
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
+ +PTPIQAQ P + GRDLIGIA+TGSGKT+A+LLP H+ Q + +GP+ +
Sbjct: 375 HNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAV 434
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA+QI +E KF S ++ C+YGG Q+ +L++G EI++ TPGR+IDM
Sbjct: 435 IMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 494
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L ++N TNLRRVTY+V+DEADRM DMGFEPQ+ +I+ +RPDRQT+ +SAT+P+ +E
Sbjct: 495 LGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEA 554
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
LAR+ L P +V +G + + + QHV ++ E +K+ KL+++L + ++IF+D
Sbjct: 555 LARRILSKPVEVQVGGRSVVCSD-VEQHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDK 613
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
++ D + + L +P +S+HG Q +RD ++++FK G ++ AT VAARGL
Sbjct: 614 QEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQL 673
Query: 414 VIIV 417
+++V
Sbjct: 674 ILVV 677
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 157/352 (44%), Positives = 224/352 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + ++ + V G P+P SF GF + +M +I K+
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 331
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 332 VCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 391
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RV+YLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 392 KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKG 356
L +P +V+ G D+ +AN + Q V+I+ K+N L + L + +L+F+ K
Sbjct: 452 ILIDPIRVVQG--DIGEANEDVTQIVEILHSGSKWNWLTRRLVEFTSSGSVLLFVTKKAN 509
Query: 357 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ +G +HGD Q+ER+ V+S+FK P++ ATDVAARGL
Sbjct: 510 AEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 561
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 171/382 (44%), Positives = 241/382 (63%)
Query: 41 DYDGAESP-----RKLD----LDGLT----PFEKNFYVESPSVAAMSXXXXXXXXXXXXI 87
DYD ++P RK++ LD + P K+FY E S++ M+ I
Sbjct: 157 DYDSDDNPIVVDKRKIEPITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGI 216
Query: 88 TVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGS 147
V G DV +PVK+F D GF +M I K + +PT IQ Q P+ L GRD+IGIA+TGS
Sbjct: 217 RVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGS 276
Query: 148 GKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIY 207
GKT A++LP IVH+ QP L +GPI ++ APTRELA QI E+ KF + ++ + +Y
Sbjct: 277 GKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVY 336
Query: 208 GGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQI 267
GG+ K Q ++L+ G EIV+ATPGRLIDML+ + R +YLVLDEADRM D+GFEPQ+
Sbjct: 337 GGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQV 396
Query: 268 KKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV-S 326
+ I+ QIRPDRQTL +SAT P +VE LAR+ L +P +V +G + AN I Q V+++ S
Sbjct: 397 RSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM-ANEDITQVVNVIPS 455
Query: 327 ESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWV 386
+++K L++ L ++D +L+F K D+I QL ++ + ++HGDK QA R
Sbjct: 456 DAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMET 515
Query: 387 LSEFKAGKSPIMTATDVAARGL 408
L +FK+G ++ ATDVAARGL
Sbjct: 516 LQKFKSGVHHVLIATDVAARGL 537
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 157/354 (44%), Positives = 227/354 (64%)
Query: 57 TPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
+PFEKNFY E +++++ + V G PKP SF GF + +M +I K
Sbjct: 215 SPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQLMHQIRK 274
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
+ + +PTPIQ QG P+AL GRD IGIA+TGSGKT A++ P +VH+ Q L PG+GPI +
Sbjct: 275 SEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEPGEGPIAV 334
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID
Sbjct: 335 IVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDH 394
Query: 237 LESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLAR 296
++ T+L+RVT+LV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 395 VKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLAR 454
Query: 297 QYLYNPYKVIIGSPDL-KANHAIRQHVDIVSESQ-KYNKLVKLLEDIMDGSRILIFMDTK 354
L +P +V+ G D+ +AN I Q V+++ Q K+ L + L + +L+F+ K
Sbjct: 455 DILVDPIRVVQG--DIGEANEDITQIVEVLQSGQDKWGWLTRRLVEFTSAGSVLVFVTKK 512
Query: 355 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
C+++ L +G+ +HGD Q+ER+ V+++FK P++ ATDVAARGL
Sbjct: 513 ANCEELATNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVATDVAARGL 566
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 158/353 (44%), Positives = 225/353 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + ++ + V G P+P SF GF + +M +I K+
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 331
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 332 VCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 391
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RV+YLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 392 KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
L +P +V+ G D+ +AN + Q V+I+ S K+N L + L + +L+F+ K
Sbjct: 452 ILIDPIRVVQG--DIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 509
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ +G +HGD Q+ER+ V+S+FK P++ ATDVAARGL
Sbjct: 510 NAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 562
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 775 (277.9 bits), Expect = 4.8e-78, Sum P(2) = 4.8e-78
Identities = 151/354 (42%), Positives = 227/354 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PF KNFY+E ++ M+ + V G+DVP+P+K + G ++ + K
Sbjct: 488 PFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKL 547
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +P PIQ Q P+ + GRD IG+A+TGSGKTL ++LP + H+ QP + GDGPI LV
Sbjct: 548 NYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 607
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+APTREL QI + KF I+ +YGG Q+ +L++G EIV+ TPGR+ID+L
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 667
Query: 238 ESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHL 294
+ + TNLRRVT+LV+DEADRM DMGFEPQI +I+ IRP+RQT+ +SAT+P++VE L
Sbjct: 668 CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETL 727
Query: 295 ARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTK 354
AR+ L P ++ +G + N I Q V++ ES ++ +L++LL + + +IL+F+ ++
Sbjct: 728 ARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQ 786
Query: 355 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ CD + R + +P LS+HG K Q +R+ +S+FK ++ AT VAARGL
Sbjct: 787 EKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGL 840
Score = 39 (18.8 bits), Expect = 4.8e-78, Sum P(2) = 4.8e-78
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 39 KRDYDGAESPRKLDLDGLTP 58
KR + AES K D DG P
Sbjct: 293 KRKKEEAESESKGDADGNEP 312
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 166/351 (47%), Positives = 220/351 (62%)
Query: 59 FEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAG 118
F K FY E P +A ++ I + G D+ PV SF GF D ++Q I+K
Sbjct: 265 FNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQS 324
Query: 119 FFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVL 178
PTPIQ Q P+AL GRDLI IA+TGSGKT ++ P+I H+ QP+L GDGPI L L
Sbjct: 325 IETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFL 384
Query: 179 APTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 238
APTRELA QI E+ K+ K+K+T +YGGV K Q ++L+ G EI++ATPGRLIDM++
Sbjct: 385 APTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIK 444
Query: 239 SHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQY 298
T L RV+YLVLDEAD+M D GF PQ+ I++ +RPDRQTL +SAT+ VE AR
Sbjct: 445 LKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTI 504
Query: 299 LYNPYKVIIGSPDLKANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKKGC 357
L +P K+ IG AN I Q V ++ S+S K+N L L ++ +LIF+ TK
Sbjct: 505 LSDPIKISIGMIG-SANSDITQIVQVLKSDSDKWNWLTNQLALLLSQGSVLIFVSTKVAV 563
Query: 358 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+Q++ L G+ ++HGDK+Q ER + FK GK I+ ATDVAARGL
Sbjct: 564 EQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIATDVAARGL 614
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 159/353 (45%), Positives = 224/353 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + +++ + V G P+P SF GF + +M +I K+
Sbjct: 214 PFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 273
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+A+ GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 274 EYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 333
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 334 VCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 393
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RVTYLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 394 KKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 453
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
L +P +V+ G D+ +AN + Q V+I S K+N L + L + +L+F+ K
Sbjct: 454 ILIDPIRVVQG--DIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 511
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ + +HGD Q+ER+ V+SEFK PI+ ATDVAARGL
Sbjct: 512 NAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGL 564
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 159/353 (45%), Positives = 224/353 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + +++ + V G P+P SF GF + +M +I K+
Sbjct: 207 PFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 266
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+A+ GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 267 EYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 326
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 327 VCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 386
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RVTYLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 387 KKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 446
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
L +P +V+ G D+ +AN + Q V+I S K+N L + L + +L+F+ K
Sbjct: 447 ILIDPIRVVQG--DIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 504
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ + +HGD Q+ER+ V+SEFK PI+ ATDVAARGL
Sbjct: 505 NAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGL 557
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 158/353 (44%), Positives = 225/353 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + ++ + V G P+P SF GF + +M +I K+
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 331
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 332 VCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 391
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RV+YLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 392 KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
L +P +V+ G D+ +AN + Q V+I+ S K+N L + L + +L+F+ K
Sbjct: 452 ILIDPIRVVQG--DIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 509
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ +G +HGD Q+ER+ V+S+FK P++ ATDVAARGL
Sbjct: 510 NAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 562
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 158/353 (44%), Positives = 225/353 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + ++ + V G P+P SF GF + +M +I K+
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 331
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 332 VCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 391
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RV+YLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 392 KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
L +P +V+ G D+ +AN + Q V+I+ S K+N L + L + +L+F+ K
Sbjct: 452 ILIDPIRVVQG--DIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 509
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ +G +HGD Q+ER+ V+S+FK P++ ATDVAARGL
Sbjct: 510 NAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 562
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 159/353 (45%), Positives = 224/353 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + +++ + V G P+P SF GF + +M +I K+
Sbjct: 212 PFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMHQIRKS 271
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+A+ GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 272 EYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 331
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 332 VCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 391
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RVTYLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 392 KKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
L +P +V+ G D+ +AN + Q V+I S K+N L + L + +L+F+ K
Sbjct: 452 ILIDPIRVVQG--DIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 509
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ + +HGD Q+ER+ V+SEFK PI+ ATDVAARGL
Sbjct: 510 NAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGL 562
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 158/353 (44%), Positives = 225/353 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + ++ + V G P+P SF GF + +M +I K+
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 331
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 332 VCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 391
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RV+YLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 392 KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
L +P +V+ G D+ +AN + Q V+I+ S K+N L + L + +L+F+ K
Sbjct: 452 ILIDPIRVVQG--DIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 509
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ +G +HGD Q+ER+ V+S+FK P++ ATDVAARGL
Sbjct: 510 NAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAARGL 562
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 157/363 (43%), Positives = 236/363 (65%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXXXXXXXX------ITV-EGRDVPKPVKSFRDVGFPD 108
L P +KN Y+ES + ++S +T E R +PKP +F D F
Sbjct: 150 LPPIKKNLYIESKATHSLSEAQVEIWRKENFNIRCDDLTEGEKRPIPKPTCTFEDA-FQQ 208
Query: 109 Y--VMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
Y +MQ I +AGF +PTPIQ+Q WP+ L+G DLIGIA+TG+GKTL+YL+P +H+++QP
Sbjct: 209 YPEIMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHIHSQPV 268
Query: 167 LAPG-DGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEI 225
+GP +LVL PTRELA+Q++ E +K+ +KS CIYGG + Q++D+ KGV+I
Sbjct: 269 SRKQRNGPGMLVLTPTRELALQVEAECSKY-LYKGLKSVCIYGGGNRKGQIQDVTKGVDI 327
Query: 226 VIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSA 285
+IATPGRL D+ ++ NLR +TYLVLDEAD+MLD+GFE QI KIL +RPDRQT+ +A
Sbjct: 328 IIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTVMTTA 387
Query: 286 TWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGS 345
+WP LA+ YL P V +G+ DL + ++Q++ + +E +K + + + L+ +
Sbjct: 388 SWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQSLSPKD 447
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
++++F+ K D ++ L + G P S+HGD+ Q++RD L +F+ G+ I+ ATD+AA
Sbjct: 448 KVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVKILIATDLAA 507
Query: 406 RGL 408
RGL
Sbjct: 508 RGL 510
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 161/363 (44%), Positives = 232/363 (63%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXX-XXXXXXITV------EGRDVPKPVKSFRDVG--F 106
L P +KNFY ES + +AMS IT E R +P P +F D +
Sbjct: 191 LPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQCY 250
Query: 107 PDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
P+ VM+ I KAGF +PTPIQ+Q WP+ L+G DLIG+A+TG+GKTL YL+P +H+ QP
Sbjct: 251 PE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPS 309
Query: 167 L-APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEI 225
L + P +LVL PTRELA+Q++ E K+ ++S C+YGG + Q+ +L+KGV+I
Sbjct: 310 LKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGGGNRDEQIEELKKGVDI 368
Query: 226 VIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSA 285
+IATPGRL D+ S+ NL+ +TYLVLDEAD+MLDMGFEPQI KIL +RPDRQT+ SA
Sbjct: 369 IIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTSA 428
Query: 286 TWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGS 345
TWP V LA+ YL P V +G+ DL A +++Q++ + +E +K++ + L+ +
Sbjct: 429 TWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTD 488
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
++++F+ K D ++ L + S+HGD+ Q +R+ L FK GK I+ ATD+A+
Sbjct: 489 KVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLAS 548
Query: 406 RGL 408
RGL
Sbjct: 549 RGL 551
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 171/365 (46%), Positives = 227/365 (62%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITV-----EG--RDVPKPVKSFRDV--GF 106
L P EKNFY ES A MS + EG R +P PV F DV +
Sbjct: 189 LPPIEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFEQY 248
Query: 107 PDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
PD +M I K GF +PTPIQ+Q WP+ L+G DLIGIA+TG+GKTLAYL+P +H+ +QP
Sbjct: 249 PD-IMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPI 307
Query: 167 LAPGD---GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGV 223
P D GP +LVLAPTRELA+Q++ E K+ KS CIYGG + Q+ + KGV
Sbjct: 308 --PKDKRGGPGMLVLAPTRELALQVEAECLKYTYKG-FKSICIYGGGDRKAQINVVTKGV 364
Query: 224 EIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYW 283
+IVIATPGRL D+ ++ NL+ +TYL +EADRMLDMGFEPQI KIL +RPDRQT+
Sbjct: 365 DIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQIMKILIDVRPDRQTVMM 423
Query: 284 SATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMD 343
SATWP V LA+ YL NP V +G+ DL A + + Q V +++E +K + ++ +
Sbjct: 424 SATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVIVINEEEKKAFMENFIDSMKP 483
Query: 344 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 403
+ +IF+ K D I L + G P S+HGD+ Q +R+ L +FK GK I+ ATD+
Sbjct: 484 KDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDL 543
Query: 404 AARGL 408
A+RGL
Sbjct: 544 ASRGL 548
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 779 (279.3 bits), Expect = 2.1e-77, P = 2.1e-77
Identities = 157/353 (44%), Positives = 224/353 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PFEKNFY E + ++ + V G P+P SF GF + +M +I K+
Sbjct: 212 PFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKS 271
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PTPIQ QG P+AL GRD+IGIA+TGSGKT A++ P ++H+ Q L PGDGPI ++
Sbjct: 272 EYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVI 331
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTREL QI E +FG + ++S +YGG Q + LQ+G EIV+ TPGRLID +
Sbjct: 332 VCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHV 391
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TNL+RV+YLV DEADRM DMGFE Q++ I S +RPDRQTL +SAT+ K++E LAR
Sbjct: 392 KKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARD 451
Query: 298 YLYNPYKVIIGSPDL-KANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
L +P +V+ G D+ +AN + Q V+I+ S K+N L + L + +L+F+ K
Sbjct: 452 ILIDPIRVVQG--DIGEANEDVTQIVEILHSGPSKWNWLTRRLVEFTSSGSVLLFVTKKA 509
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+++ L+ +G +HGD Q+ER+ V+ +FK P++ ATDVAARGL
Sbjct: 510 NAEELANNLKQEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVATDVAARGL 562
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 781 (280.0 bits), Expect = 4.4e-77, P = 4.4e-77
Identities = 160/360 (44%), Positives = 230/360 (63%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
PF + FY E +A MS I V G DVPKPV+ + G + I K
Sbjct: 499 PFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDK 558
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
GF T IQAQ P + GRD+IG+A+TGSGKT+A+L+P H+ Q L +GPI L
Sbjct: 559 LGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGL 618
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
++ PTRELA QI ++ F + +++ C YGG P Q+ +L++G EI++ TPGR+ID+
Sbjct: 619 IMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDL 678
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L ++ TNLRRVTY+VLDEADRM DMGFEPQ+ KILS +RPDRQT+ +SAT+P+ +E
Sbjct: 679 LAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNMEA 738
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM-----DGSRIL 348
LAR+ L P ++++G + A I Q V++ +E +K+ +L++LL ++ + +R L
Sbjct: 739 LARKTLTKPIEIVVGGRSVVAPE-ITQIVEVCNEEKKFVRLLELLGNLYSTDENEDARSL 797
Query: 349 IFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
IF+D ++ D + R+L G+P +SIHG K Q +RD + +FKAG P++ AT VAARGL
Sbjct: 798 IFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGL 857
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 161/364 (44%), Positives = 235/364 (64%)
Query: 59 FEKNFYVESPSVAAMSXXXXXXXXXXX-XITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
F+KNFY+E+ + M+ ITV+G D PKP+K++ G +M + K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +PT IQAQ P + GRD+IGIA+TGSGKTLA+LLP H+ QP L GDGPI ++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVI 382
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
LAPTRELA+Q +E+ KF +K C YGGV Q+ DL++G EIV+ TPGR+ID+L
Sbjct: 383 LAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVL 442
Query: 238 ESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHL 294
+++ TNLRRVTYLVLDEADRM D GFEPQI K+++ IRPD+QT+ +SAT+P+ +E L
Sbjct: 443 AANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEAL 502
Query: 295 ARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTK 354
AR+ L P ++++G + + I Q+ I +E QK+ KL++LL + ++F+D +
Sbjct: 503 ARKVLDKPVEILVGGKSVVCSD-ITQNAVICAEHQKFLKLLELLGMYYEEGSSIVFVDKQ 561
Query: 355 KGCDQITRQLRMDGWPALS-IHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
+ D I QL G+ +++ +HG Q +RD +++FK G ++ AT VAARGL
Sbjct: 562 EKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNL 621
Query: 414 VIIV 417
+++V
Sbjct: 622 ILVV 625
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 160/367 (43%), Positives = 237/367 (64%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITV-------EGRD---VPKPVKSFRD--V 104
P KNFY E+P VA ++ ITV EG +P PV +F
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
Query: 105 GFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ 164
+PD +++EI+K GF +P+PIQ+Q WP+ L+G D+IGIA+TG+GKTLA+LLP ++H Q
Sbjct: 290 EYPD-MLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQ 348
Query: 165 --PFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKG 222
P G G VLVLAPTRELA+QI+ E K+ +K+ C+YGG + Q+ DL++G
Sbjct: 349 STPRGTRG-GANVLVLAPTRELALQIEMEVKKYSFRG-MKAVCVYGGGNRNMQISDLERG 406
Query: 223 VEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLY 282
EI+I TPGRL D++ ++ ++ +TYLVLDEADRMLDMGFEPQI+K++ IRPDRQT+
Sbjct: 407 AEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIM 466
Query: 283 WSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQ-KYNKLVKLLEDI 341
SATWP V LA+ Y+ NP +V +GS DL A H+++Q + ++ + K+N + ++++
Sbjct: 467 TSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNM 526
Query: 342 MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTAT 401
+I+IF K D ++ +L +DG+ IHG++ Q +R+ +++ K+G I+ AT
Sbjct: 527 SSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVAT 586
Query: 402 DVAARGL 408
DVA+RGL
Sbjct: 587 DVASRGL 593
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 158/364 (43%), Positives = 232/364 (63%)
Query: 55 GLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITV-------EGRDVPKPVKSFRDVG-- 105
GL P +KNFY+ES ++MS + E R +P P +F D
Sbjct: 189 GLPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNFEDAFHC 248
Query: 106 FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP 165
+P+ VM+ I KAGF +PTPIQ+Q WP+ L+G DLIG+A+TG+GKTL+YL+P +H+++QP
Sbjct: 249 YPE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDSQP 307
Query: 166 FLAPG-DGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVE 224
L +GP +LVL PTRELA+Q+ E +++ +KS CIYGG + Q++DL KG +
Sbjct: 308 VLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG-LKSVCIYGGGDRDGQIKDLSKGAD 366
Query: 225 IVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWS 284
I+IATPGRL D+ ++ L+ +TYLVLDEAD+MLDMGFEPQI KIL +RPDRQT+ S
Sbjct: 367 IIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMTS 426
Query: 285 ATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG 344
ATWP V LA+ YL P V +G+ DL A + Q++ + +E +K + + ++ +
Sbjct: 427 ATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRSHIQAFIDSMSPK 486
Query: 345 SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVA 404
+++IF+ K D ++ L + S+HG++ Q++R+ L FK GK I+ ATD+A
Sbjct: 487 DKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILIATDLA 546
Query: 405 ARGL 408
+RGL
Sbjct: 547 SRGL 550
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 169/365 (46%), Positives = 228/365 (62%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXX-XXXXXXITVEG------RDVPKPVKSFRDVGFPD 108
L +KNFY+E+ SVAA S I V+ R +P PV +F + F
Sbjct: 227 LPVLKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFEEA-FAH 285
Query: 109 Y--VMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
Y +M+ I + GF +PTPIQ+Q WP+ L G DLIGIA+TG+GKTLAYLLP +H++ QP
Sbjct: 286 YPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIHMDGQPM 345
Query: 167 LAPGD---GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGV 223
P D GP +LVL PTRELA+QI+ E K+ KS CIYGG + Q++ + GV
Sbjct: 346 --PRDKRNGPGMLVLTPTRELALQIEAECNKYSYKG-FKSICIYGGGDRNAQIKVVTSGV 402
Query: 224 EIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYW 283
+IVIATPGRL D+ + NLR +TYLVLDEADRMLDMGFEPQI KI+ IRPDRQT+
Sbjct: 403 DIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIRPDRQTVMT 462
Query: 284 SATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMD 343
SATWP V LA+ YL +P V +G+ DL A + ++Q V V E +K + + + +
Sbjct: 463 SATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIHRMEP 522
Query: 344 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 403
++LIF+ K D ++ L + G S+HGD+ Q +R+ L +FK G+ I+ ATD+
Sbjct: 523 LDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKDGRVRILVATDL 582
Query: 404 AARGL 408
A+RGL
Sbjct: 583 ASRGL 587
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 767 (275.1 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 156/353 (44%), Positives = 227/353 (64%)
Query: 59 FEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAG 118
F+KNFY+E P +A M+ + + G+D PKP++S+ G + V + K
Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQ 528
Query: 119 FFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVL 178
+ +PT IQAQ P + GRDLIGIA TGSGKTLA+LLP H+ AQP APG+G I L++
Sbjct: 529 YEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIM 588
Query: 179 APTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 238
+PTRELA+QI E KF +++ C+YGG Q+ +L++G +IV+ TPGR+ID+L
Sbjct: 589 SPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILC 648
Query: 239 SHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLA 295
++N TNLRRVT+LVLDEADRM DMGF PQI I+ IRPDRQT+ +SAT+P +VE++A
Sbjct: 649 ANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVA 708
Query: 296 RQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKK 355
++ L P ++I G + ++ I Q V++ ++ +L++LL +ILIF + ++
Sbjct: 709 KKILNKPLEIIAGGRSIVSSD-IEQFVEVRPTETRFRRLIELLSIWYHKGQILIFTNRQE 767
Query: 356 GCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D + RQL + LS+HG K Q +RD +S+FK I+ AT +A+RGL
Sbjct: 768 TTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGL 820
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 158/366 (43%), Positives = 235/366 (64%)
Query: 50 KLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPD 108
KLD+ P KNF+VE ++ M+ I V G+DVPKPV+ + G
Sbjct: 331 KLDI---VPVRKNFWVEPYELSEMTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLTR 387
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
++ I+K + +PT IQ Q P+ + GRD++G+A+TGSGKT+A+LLP H+ Q +
Sbjct: 388 PILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPVK 447
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
+GPI L+L PTRELAVQI ++ F + +++ C YGG P Q+ DL++G EIV+A
Sbjct: 448 DNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIKDQIADLKRGAEIVVA 507
Query: 229 TPGRLIDMLESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSA 285
T GR+ID+L ++ +LRR TY+VLDEADRM DMGFEPQ+ KI + +RPDRQT+ +SA
Sbjct: 508 TTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIFANVRPDRQTVLFSA 567
Query: 286 TWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIM--- 342
T PK ++ L ++ L NP ++ +G + A+ I Q V+I E K+N+L++LL ++
Sbjct: 568 TMPKIMDALVKKVLKNPVEIEVGGKSVVASE-ITQIVEIRDEKSKFNRLLELLGELYKDD 626
Query: 343 DGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATD 402
D R LIF++ ++ D++ R+L G+ +S+HG K Q +RD +S+FK+G P+M AT
Sbjct: 627 DDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATS 686
Query: 403 VAARGL 408
VAARGL
Sbjct: 687 VAARGL 692
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 168/365 (46%), Positives = 224/365 (61%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITV-----EG--RDVPKPVKSFRDV--GF 106
L P EKNFY ES A MS + EG R +P PV F DV +
Sbjct: 2 LPPIEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFEQY 61
Query: 107 PDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
PD +M I K GF +PTPIQ+Q WP+ L+G DLIGIA+TG+GKTLAYL+P +H+ +QP
Sbjct: 62 PD-IMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQPI 120
Query: 167 LAPGD---GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGV 223
P D GP +LVLAPTRELA+Q++ E K+ KS CIYGG + Q+ + KGV
Sbjct: 121 --PKDKRGGPGMLVLAPTRELALQVEAECLKYTYKG-FKSICIYGGGDRKAQINVVTKGV 177
Query: 224 EIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYW 283
+IVIATPGRL D+ ++ NL+ +TYLVLDEADRMLDMGFEPQI KIL +RPDRQT+
Sbjct: 178 DIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMM 237
Query: 284 SATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMD 343
SATWP V LA+ YL NP V +G+ DL + + +++ + + K +++
Sbjct: 238 SATWPDGVRRLAKSYLRNPMIVYVGTLDLAVSGVVLKYLQFDKDIFTW-KYMQVNAQSFC 296
Query: 344 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 403
+++F+ D I L + G P S+HGD+ Q +R+ L +FK GK I+ ATD+
Sbjct: 297 TDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATDL 356
Query: 404 AARGL 408
A+RGL
Sbjct: 357 ASRGL 361
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 159/367 (43%), Positives = 231/367 (62%)
Query: 55 GLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITV-------EGRDVPKPVKSFRDVG-- 105
GL +KNFY+ES ++MS + E R +P P F D
Sbjct: 189 GLPLIKKNFYMESEITSSMSQEQVQNWRKENYNIMCDDLKDGEKRPIPNPACKFEDAFQC 248
Query: 106 FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP 165
+P+ VM I KAGF +PTPIQ+Q WP+ L+G DLIG+A+TG+GKTL+YL+P +HV++QP
Sbjct: 249 YPE-VMINIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVDSQP 307
Query: 166 FL----APGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQK 221
+ +GP +LVL PTRELA+Q++ E +K+ +KS C+YGG + Q++DL K
Sbjct: 308 VVFSLQRARNGPGMLVLTPTRELALQVEAECSKYSYKG-LKSVCVYGGGDRDGQIKDLLK 366
Query: 222 GVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTL 281
GV+I+IATPGRL D+ ++ L+ ++YLVLDEAD+MLDMGFEPQI KIL IRPDRQT+
Sbjct: 367 GVDIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIMKILLDIRPDRQTV 426
Query: 282 YWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDI 341
SATWP V LA+ YL P V +G+ DL A ++Q++ + +E +K + + +E +
Sbjct: 427 MTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRSHIQTFIESM 486
Query: 342 MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTAT 401
+++IF+ K D ++ L + S+HG++ Q +R+ L FK GK I+ AT
Sbjct: 487 SPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVRILIAT 546
Query: 402 DVAARGL 408
D+A+RGL
Sbjct: 547 DLASRGL 553
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 150/322 (46%), Positives = 213/322 (66%)
Query: 89 VEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSG 148
V G P+P SF GF + +M +I K+ + +PTPIQ QG P+AL GRD+IGIA+TGSG
Sbjct: 243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSG 302
Query: 149 KTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYG 208
KT A++ P ++H+ Q L PGDGPI +++ PTREL QI E +FG + ++S +YG
Sbjct: 303 KTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYG 362
Query: 209 GVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIK 268
G Q + LQ+G EIV+ TPGRLID ++ TNL+RV+YLV DEADRM DMGFE Q++
Sbjct: 363 GGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVR 422
Query: 269 KILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDL-KANHAIRQHVDIV-S 326
I S +RPDRQTL +SAT+ K++E LAR L +P +V+ G D+ +AN + Q V+I+ S
Sbjct: 423 SIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQG--DIGEANEDVTQIVEILHS 480
Query: 327 ESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWV 386
K+N L + L + +L+F+ K +++ L+ +G +HGD Q+ER+ V
Sbjct: 481 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV 540
Query: 387 LSEFKAGKSPIMTATDVAARGL 408
+S+FK P++ ATDVAARGL
Sbjct: 541 ISDFKKKDIPVLVATDVAARGL 562
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 153/357 (42%), Positives = 224/357 (62%)
Query: 59 FEKNFYVESPSVAAMS-XXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
F+K+FYVE + +S I + G D PKPV S+ G + I+
Sbjct: 377 FKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISVINSL 436
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
G+ +PT IQAQ P GRD+IG+A+TGSGKT+A+LLP H+ Q L G+GPI ++
Sbjct: 437 GYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAII 496
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+ PTRELAVQI +E F I++ C YGG P Q+ DL++G EIV+ TPGR+ID+L
Sbjct: 497 MTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVL 556
Query: 238 ESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHL 294
++ TNL R TYLVLDEADRM D+GFEPQ+ +I++ IRPDRQT+ +SAT+P+ +E L
Sbjct: 557 SANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTVLFSATFPRAMEAL 616
Query: 295 ARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGS---RILIFM 351
AR+ L P ++ +G + A+ + Q V++ E K+++L++LL ++ + R L+F+
Sbjct: 617 ARKVLKKPVEITVGGRSVVASE-VEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFV 675
Query: 352 DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D ++ D + L G+ + SIHG K Q +RD +S++KAG ++ AT V ARGL
Sbjct: 676 DRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGL 732
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 742 (266.3 bits), Expect = 1.7e-73, P = 1.7e-73
Identities = 149/363 (41%), Positives = 232/363 (63%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXX-XXXXXXITV------EGRDVPKPVKSFRDV--GF 106
L P +KNFY+ES + + MS IT E R +PKP F+D +
Sbjct: 171 LPPVKKNFYIESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQY 230
Query: 107 PDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
PD +++ I + G +PTPIQ+Q WP+ L+G DLI +A+TG+GKTL+YL+P +H+++QP
Sbjct: 231 PD-LLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPI 289
Query: 167 LAPG-DGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEI 225
+GP +LVL PTRELA+ ++ E +K+ +KS CIYGG + Q+ D+ KGV+I
Sbjct: 290 SREQRNGPGMLVLTPTRELALHVEAECSKYSYKG-LKSICIYGGRNRNGQIEDISKGVDI 348
Query: 226 VIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSA 285
+IATPGRL D+ +++ NLR +TYLV+DEAD+MLDM FEPQI+KIL +RPDRQT+ SA
Sbjct: 349 IIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSA 408
Query: 286 TWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGS 345
TWP V LA YL +P V +G+ +L A + ++Q++ + +E +K + +E++
Sbjct: 409 TWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPND 468
Query: 346 RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAA 405
++++F+ K D ++ + G A S+HG+ Q++++ + +FK+G I+ TD+ +
Sbjct: 469 KVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVS 528
Query: 406 RGL 408
RGL
Sbjct: 529 RGL 531
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 578 (208.5 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 115/243 (47%), Positives = 166/243 (68%)
Query: 176 LVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 235
L+L PTREL +Q+ E F + IKS +YGGVPK Q+ +L+KG +I++ATPGRL+D
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 490
Query: 236 MLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLA 295
LE+ N NL + Y+V+DEADR+LDMGFE Q++KI++Q+ ++Q L+ +ATWP++V LA
Sbjct: 491 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKLA 550
Query: 296 RQYL-YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTK 354
+ Y+P K+ IG +L AN I Q+V I S KL+ L++ + ++ILIF DTK
Sbjct: 551 YDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKENYENNKILIFCDTK 610
Query: 355 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLG--NCA 412
+ CD + ++LR + ALSIHGDK Q ERD +L+ +K + I+ ATDVA+RGL N +
Sbjct: 611 RNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVASRGLDIKNIS 670
Query: 413 CVI 415
VI
Sbjct: 671 VVI 673
Score = 171 (65.3 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
+ F DV F + ++ ++ F EPT IQ WP+AL G+DLIG+AETGSGKTLA++LP
Sbjct: 287 INKFSDVCFHESILNYLNNK-FSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPC 345
Query: 158 IVHV 161
+H+
Sbjct: 346 FMHI 349
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 153/352 (43%), Positives = 217/352 (61%)
Query: 59 FEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAG 118
F KNFY E + + + V G P+PV SF F +M+ I K+
Sbjct: 225 FNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSE 284
Query: 119 FFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVL 178
+ +PTPIQA P AL GRD++GIA+TGSGKT AYL PAIVH+ QP L G+GP+ +++
Sbjct: 285 YEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIV 344
Query: 179 APTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQ-KGVEIVIATPGRLIDML 237
PTRELA+Q+ QE+ KF I C YGG K Q +LQ +G E+V+ TPGR+ID++
Sbjct: 345 VPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPGRIIDLV 404
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQ 297
+ TN R T+LV DEADRM DMGFE Q+K I +RPDRQ L +SAT+ ++VE LAR
Sbjct: 405 KMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSATFKQKVERLARD 464
Query: 298 YLYNPYKVIIGSPDLKANHAIRQHVDIV-SESQKYNKLVKLLEDIMDGSRILIFMDTKKG 356
L +P +++ G +AN I Q V ++ ++ K + L++ L + ++LIF+ K
Sbjct: 465 ALVDPVRIVQGEVG-EANADIEQKVFVMQNQDVKLHWLIRNLVEFASLGKVLIFVTKKLD 523
Query: 357 CDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ + ++L+M + + +HGD QAER+ L +F+ KS I+ ATDVAARGL
Sbjct: 524 SEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFRK-KSQILVATDVAARGL 574
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 158/346 (45%), Positives = 222/346 (64%)
Query: 87 ITVEGRDVPK--PVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAE 144
+T +G + K +K+F + P+ V+ + K F +P+PIQ+ WP L GRDLIGIA+
Sbjct: 102 VTGKGVEEAKYAALKTFAESNLPENVL-DCCKT-FEKPSPIQSHTWPFLLDGRDLIGIAK 159
Query: 145 TGSGKTLAYLLPAIVHV-NAQPFLAPGD---GPIVLVLAPTRELAVQIQQESTKFGASSK 200
TGSGKTLA+ +PAI+HV + G P LVL+PTRELAVQI + G
Sbjct: 160 TGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCG 219
Query: 201 IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLD 260
+KS C+YGG KGPQ+ ++ GV+IVI TPGRL D++ES+ L V+++VLDEADRMLD
Sbjct: 220 LKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLD 279
Query: 261 MGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLY-NPYKVIIGSPDLKANHAIR 319
MGFE ++ ILS RQ + +SATWP +V LA++++ NP KVIIGS DL ANH +
Sbjct: 280 MGFEEPVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVM 339
Query: 320 QHVDIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
Q ++++ E + +L+ LLE +R+L+F K +++ R L+ GW A+SIHG+
Sbjct: 340 QIIEVLDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGN 399
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCACVIIVLCTFVL 423
K+Q+ER LS FK G P++ ATDVAARGL +++ TF L
Sbjct: 400 KAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPL 445
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 671 (241.3 bits), Expect = 6.9e-69, Sum P(2) = 6.9e-69
Identities = 131/301 (43%), Positives = 198/301 (65%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKA 117
PF KNFY+E ++ M+ + V G+DVP+P++ + G ++ + K
Sbjct: 355 PFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKL 414
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
+ +P PIQAQ P+ + GRD IG+A+TGSGKTL ++LP + H+ QP + GDGPI LV
Sbjct: 415 NYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 474
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
+APTREL QI + KF + I +YGG Q+ +L++G EIV+ TPGR+ID+L
Sbjct: 475 MAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDIL 534
Query: 238 ESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHL 294
+ + TNLRRVTYLV+DEADRM DMGFEPQI +I+ IRPDRQT+ +SAT+P++VE L
Sbjct: 535 CTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETL 594
Query: 295 ARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTK 354
AR+ L P ++ +G + N I Q V+I ES+++++L++LL + + ++L+F+ ++
Sbjct: 595 ARKVLNKPVEIQVGGRSV-VNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQ 653
Query: 355 K 355
+
Sbjct: 654 E 654
Score = 53 (23.7 bits), Expect = 6.9e-69, Sum P(2) = 6.9e-69
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 387 LSEFKAGKSPIMTATDVAARGL 408
+S+FK+ ++ AT VAARGL
Sbjct: 657 ISDFKSDVCNLLIATSVAARGL 678
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 154/370 (41%), Positives = 230/370 (62%)
Query: 59 FEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEI-SK 116
F K FY E+ ++A+S I V+G DVP+P+ + + P + I K
Sbjct: 252 FRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDK 311
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
F +P+ IQ+Q P L GRD+IGIA+TGSGKTL+Y+LP + H+ Q F GPI L
Sbjct: 312 LKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGL 371
Query: 177 VLAPTRELAVQIQQESTKFGA-SSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 235
+L+PTRELA+QI++E F ++ ++ C YGG Q+ +L+KGVEI++ TPGR+ID
Sbjct: 372 ILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVID 431
Query: 236 MLESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVE 292
+L +++ NL+R T++VLDEADRM D+GFEPQ+ KIL+QIRPDRQT+ +SAT+P+++E
Sbjct: 432 LLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKME 491
Query: 293 HLARQYLYNPYKVIIGSPDLKANHAIRQHVDI----VSESQKYNKL-VKLLEDIMDG--- 344
LA+Q L +P +I+G + A I+Q V + E KY + V+ L DI+
Sbjct: 492 TLAKQILTDPVVIIVGGISVVAPE-IKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQI 550
Query: 345 ----SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI--M 398
S+IL+F + + D++ L + +PA++IHG K Q +R + + EF + S I +
Sbjct: 551 EHPDSKILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINIL 610
Query: 399 TATDVAARGL 408
AT +AARGL
Sbjct: 611 IATSIAARGL 620
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 154/370 (41%), Positives = 230/370 (62%)
Query: 59 FEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEI-SK 116
F K FY E+ ++A+S I V+G DVP+P+ + + P + I K
Sbjct: 252 FRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSVIHDK 311
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
F +P+ IQ+Q P L GRD+IGIA+TGSGKTL+Y+LP + H+ Q F GPI L
Sbjct: 312 LKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGL 371
Query: 177 VLAPTRELAVQIQQESTKFGA-SSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLID 235
+L+PTRELA+QI++E F ++ ++ C YGG Q+ +L+KGVEI++ TPGR+ID
Sbjct: 372 ILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPGRVID 431
Query: 236 MLESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVE 292
+L +++ NL+R T++VLDEADRM D+GFEPQ+ KIL+QIRPDRQT+ +SAT+P+++E
Sbjct: 432 LLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATFPRKME 491
Query: 293 HLARQYLYNPYKVIIGSPDLKANHAIRQHVDI----VSESQKYNKL-VKLLEDIMDG--- 344
LA+Q L +P +I+G + A I+Q V + E KY + V+ L DI+
Sbjct: 492 TLAKQILTDPVVIIVGGISVVAPE-IKQEVVLFETSAEEQDKYKQQRVEKLHDILTNYQI 550
Query: 345 ----SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI--M 398
S+IL+F + + D++ L + +PA++IHG K Q +R + + EF + S I +
Sbjct: 551 EHPDSKILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINIL 610
Query: 399 TATDVAARGL 408
AT +AARGL
Sbjct: 611 IATSIAARGL 620
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 142/321 (44%), Positives = 209/321 (65%)
Query: 94 VPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAY 153
+PKP+ + V F + +SK F +PTP+Q+ GWP+AL G D++GI++TGSGKTL++
Sbjct: 135 LPKPIDTIESVPFQSTIKNFLSKK-FEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSF 193
Query: 154 LLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKG 213
+LPAI H+ AQP + GP VLV+APTRELA QI QE+ ++ I+ IYGG P+
Sbjct: 194 ILPAIEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRR 253
Query: 214 PQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQ 273
Q L + +IV+ TPGR+ID +ES + +L+ +++LV+DEADR+++MGFE QI I +
Sbjct: 254 SQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDGIFNS 313
Query: 274 IRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV-SESQKYN 332
IRPDRQ LYWSATWPK+V A +++ P ++ IGS L AN I Q IV +++ K +
Sbjct: 314 IRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVD 373
Query: 333 KLVKLLEDIMDG---SRILIFMDTKKGCDQITRQLRMDGWPAL--SIHGDKSQAERDWVL 387
L+ L +I ++ LIF TKKG D + ++ +G ++HGD Q R+ ++
Sbjct: 374 ALMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERIV 433
Query: 388 SEFKAGKSPIMTATDVAARGL 408
+FK + I+ ATDVA+RGL
Sbjct: 434 QDFKNKRLDIVVATDVASRGL 454
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 482 (174.7 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 95/202 (47%), Positives = 139/202 (68%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+T++G +P P++S+ + GFP ++ I K G+ EPTPIQ Q P+ L+ RD+IG+AETG
Sbjct: 382 VTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETG 441
Query: 147 SGKTLAYLLPAIVHVNAQPFLAP----GDGPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKTLA+L+P + + + P + GP +++APTRELA QI++E+TKFG I+
Sbjct: 442 SGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIR 501
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+ + GG+ + Q L+ G EIVIATPGRLID+LE+ L + TY+VLDEADRM+DMG
Sbjct: 502 TVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMG 561
Query: 263 FEPQIKKIL-----SQIRPDRQ 279
FEP ++KIL + ++PD +
Sbjct: 562 FEPDVQKILEYMPVTNLKPDTE 583
Score = 227 (85.0 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 51/131 (38%), Positives = 78/131 (59%)
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
RQT+ ++AT P VE LAR YL P V IGS K Q V ++ E+ K KL+++
Sbjct: 602 RQTVMFTATMPPAVERLARTYLRRPATVYIGSVG-KPTERTEQIVYMMGENDKRKKLMEI 660
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L +D ++IF++ KKG D + + L G+ + ++HG K Q +R++ L+ K+G I
Sbjct: 661 LSRKIDPP-VIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDI 719
Query: 398 MTATDVAARGL 408
+ ATDVA RG+
Sbjct: 720 LVATDVAGRGI 730
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 160/370 (43%), Positives = 221/370 (59%)
Query: 63 FYVESPSVAAMSXXXXXXXXXXXXITVEGR-DVP-KPVKSFRDVGFPDYVMQEISKAGFF 120
FYV+S ++ ++ I VE D+ +P+ SF + + EISK F
Sbjct: 76 FYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FP 133
Query: 121 EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHV-NAQPFLAPGDGPIVLVLA 179
+PTPIQA WP L G+D++G+AETGSGKT A+ +PAI H+ N Q G VLV++
Sbjct: 134 KPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQK----KRGIQVLVIS 189
Query: 180 PTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
PTRELA QI ++ C+YGGVPK Q L+K ++V+ATPGRL+D+L+
Sbjct: 190 PTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQE 248
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD-RQTLYWSATWPKEVEHLARQY 298
+ +L +V YLVLDEADRML+ GFE IK I+ + RQTL ++ATWPKEV LA +
Sbjct: 249 GSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELASTF 308
Query: 299 LYNPYKVIIGSPD-LKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG----SRILIFMDT 353
+ NP KV IG+ D L AN I Q V++V K KL++LL+ G ++LIF
Sbjct: 309 MNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALY 368
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
KK ++ R L+ +G+ +IHGD SQ +R L+EFK+GKS ++ ATDVAARGL
Sbjct: 369 KKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNV 428
Query: 414 VIIVLCTFVL 423
++ TF L
Sbjct: 429 KTVINLTFPL 438
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 583 (210.3 bits), Expect = 6.1e-65, Sum P(2) = 6.1e-65
Identities = 126/293 (43%), Positives = 186/293 (63%)
Query: 56 LTPFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEI 114
L PF+KNFY+ES +V++MS I ++G PKPV + +G M I
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLI 270
Query: 115 S-KAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ-PFLAPGDG 172
+ K F TPIQ+Q P + GRD+IGI++TGSGKT++YLLP + V AQ P G
Sbjct: 271 TEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETG 330
Query: 173 PIVLVLAPTRELAVQIQQESTKFG-ASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPG 231
P+ L+LAPTRELA+QI +E TKF A + I+S C GG Q+ DL++G EIV+ATPG
Sbjct: 331 PMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPG 390
Query: 232 RLIDMLESHNTNL---RRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
R ID+L ++ L +R+T++V+DEADR+ D+GFEPQI +I+ +RPD+Q + +SAT+P
Sbjct: 391 RFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFP 450
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV-SESQKYNKLVKLLED 340
++ A + L++P + I S + N ++Q I SE +K++ LV+L+ +
Sbjct: 451 NKLRSFAVRVLHSPISITINSKGM-VNENVKQKFRICHSEDEKFDNLVQLIHE 502
Score = 101 (40.6 bits), Expect = 6.1e-65, Sum P(2) = 6.1e-65
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 345 SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVA 404
++ +IF+ ++ CD I+++L G +IH K ER L +FK K+ I+ T+V
Sbjct: 526 AKAIIFVSSQNICDFISKKLLNAGIVTCAIHAGKPYQERLMNLEKFKREKNSILLCTEVL 585
Query: 405 ARGLG--NCACVII--VLCTFVLYL-TLG 428
+RGL + VII + TF Y+ T G
Sbjct: 586 SRGLNVPEVSLVIIYNAVKTFAQYVHTTG 614
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 141/337 (41%), Positives = 212/337 (62%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I G +VP PV +F ++ + + I + + +PTP+Q P+ L+GRDL+ A+TG
Sbjct: 147 IETSGDNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTG 206
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG-----PIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+ P I + + G P+ ++L+PTRELA QI E+ KF + +
Sbjct: 207 SGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGV 266
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
K YGG P Q+R+L++GV+I++ATPGRL D+LE +++ + +L LDEADRMLDM
Sbjct: 267 KVVVAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 326
Query: 262 GFEPQIKKILSQI----RPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHA 317
GFEPQI+KI+ Q+ R RQTL +SAT+P+E++ LA +L N + +G +
Sbjct: 327 GFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVG-SSTDL 385
Query: 318 IRQHVDIVSESQKYNKLVKLL----EDIMDGSRIL--IFMDTKKGCDQITRQLRMDGWPA 371
I Q V+ V +S K + L+ LL E+ + G + L +F++TK+G D + L ++G+PA
Sbjct: 386 IVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPA 445
Query: 372 LSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
SIHGD++Q ER+ L FK+G++PI+ ATDVAARGL
Sbjct: 446 TSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGL 482
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 144/338 (42%), Positives = 210/338 (62%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I G +VP PV +F ++ + + I + + +PTP+Q P+ GRDL+ A+TG
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTG 193
Query: 147 SGKTLAYLLPAIV------HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSK 200
SGKT A+ P I H+ +P G P+ ++L+PTRELA QI E+ KF +
Sbjct: 194 SGKTAAFCFPIISGIMKDQHIE-RPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTG 252
Query: 201 IKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLD 260
+K YGG P Q+R+L++GV+I++ATPGRL D+LE +L+ V +L LDEADRMLD
Sbjct: 253 VKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLD 312
Query: 261 MGFEPQIKKILSQI-RPD---RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANH 316
MGFEPQI+KI+ Q+ P RQT+ +SAT+P+E++ LA +L N + +G +
Sbjct: 313 MGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVG-SSTD 371
Query: 317 AIRQHVDIVSESQKYNKLVKLL----EDIMDGSRIL--IFMDTKKGCDQITRQLRMDGWP 370
I Q V+ V +S K + L+ LL E+ G + L +F++TKKG D + L ++G+P
Sbjct: 372 LIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFP 431
Query: 371 ALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
A +IHGD+SQ ER+ L FK G++PI+ ATDVAARGL
Sbjct: 432 ATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGL 469
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 527 (190.6 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 114/240 (47%), Positives = 158/240 (65%)
Query: 173 PIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 232
PI LVLAPTRELA+QI E+ KF S+++ +YGG G Q+RDL++G +++ATPGR
Sbjct: 315 PISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 374
Query: 233 LIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQ--IRP--DRQTLYWSATWP 288
L+DM+E L YLVLDEADRMLDMGFEPQI++I+ Q + P RQT+ +SAT+P
Sbjct: 375 LVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFP 434
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRIL 348
KE++ LAR +L + +G + + I Q V V E+ K + L+ LL S L
Sbjct: 435 KEIQILARDFLEEYIFLAVGRVGSTSEN-ITQKVVWVEENDKRSFLLDLLNATGKDSLTL 493
Query: 349 IFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+F++TKKG D + L +G+ SIHGD+SQ +R+ L +F++G+ PIM AT VAARGL
Sbjct: 494 VFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGL 553
Score = 143 (55.4 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 34/118 (28%), Positives = 56/118 (47%)
Query: 54 DGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQE 113
D P N +E +A + + G + P ++SF DV + +M
Sbjct: 178 DWSKPMPPNERLEHELFSASNTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMGN 237
Query: 114 ISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGD 171
I+ + + PTP+Q P+ RDL+ A+TGSGKT A+LLP + + ++ PG+
Sbjct: 238 ITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSE---GPGE 292
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 660 (237.4 bits), Expect = 1.5e-63, P = 1.5e-63
Identities = 144/365 (39%), Positives = 221/365 (60%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
P +KN YV+ + M I V G++ P+PV+ F G P ++Q + K
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEK 740
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
F + IQ Q P + GRD+I IAETGSGKTL+YL P I HV Q L DGPI +
Sbjct: 741 KNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISI 800
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
+L PTREL++Q++ E+ + + I+ +YGG Q++ L+KGVEI++ TPGR+ID+
Sbjct: 801 ILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDI 860
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L N TNL RV+++VLDEADR+LD+GFE QI IL R D+QT SAT+P +++
Sbjct: 861 LTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQN 920
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
+A++ LY P ++I+G K N+ I Q V+I+ ES+K +L+KLL + + +LIF++
Sbjct: 921 MAKKLLYKPIEIIVGEKG-KTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNK 979
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
+ D + +L + L +HG + Q +R + L +FK ++ ++ AT V ARG+ +
Sbjct: 980 QIEADLLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGI-DIKN 1038
Query: 414 VIIVL 418
+I+V+
Sbjct: 1039 IILVI 1043
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 660 (237.4 bits), Expect = 1.5e-63, P = 1.5e-63
Identities = 144/365 (39%), Positives = 221/365 (60%)
Query: 58 PFEKNFYVESPSVAAMSXXXXXXXXXXXX-ITVEGRDVPKPVKSFRDVGFPDYVMQEISK 116
P +KN YV+ + M I V G++ P+PV+ F G P ++Q + K
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEK 740
Query: 117 AGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVL 176
F + IQ Q P + GRD+I IAETGSGKTL+YL P I HV Q L DGPI +
Sbjct: 741 KNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISI 800
Query: 177 VLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
+L PTREL++Q++ E+ + + I+ +YGG Q++ L+KGVEI++ TPGR+ID+
Sbjct: 801 ILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSNIARQLKVLKKGVEILVGTPGRIIDI 860
Query: 237 LESHN---TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEH 293
L N TNL RV+++VLDEADR+LD+GFE QI IL R D+QT SAT+P +++
Sbjct: 861 LTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIYNILRNCRKDKQTAMISATFPNYIQN 920
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDT 353
+A++ LY P ++I+G K N+ I Q V+I+ ES+K +L+KLL + + +LIF++
Sbjct: 921 MAKKLLYKPIEIIVGEKG-KTNNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLVLIFVNK 979
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
+ D + +L + L +HG + Q +R + L +FK ++ ++ AT V ARG+ +
Sbjct: 980 QIEADLLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMARGI-DIKN 1038
Query: 414 VIIVL 418
+I+V+
Sbjct: 1039 IILVI 1043
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 521 (188.5 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 113/240 (47%), Positives = 158/240 (65%)
Query: 173 PIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGR 232
PI LVLAPTRELA+QI E+ KF S ++ +YGG G Q+RDL++G +++ATPGR
Sbjct: 299 PISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 358
Query: 233 LIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWP 288
L+DM+E L YLVLDEADRMLDMGFEPQI++I+ Q + P RQT+ +SAT+P
Sbjct: 359 LLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSATFP 418
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRIL 348
KE++ LAR +L + + +G + + I Q V V E+ K + L+ LL S L
Sbjct: 419 KEIQILARDFLEDYIFLAVGRVGSTSEN-ITQKVVWVEENDKRSFLLDLLNATGKDSLTL 477
Query: 349 IFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+F++TKKG D + L +G+ SIHGD+SQ +R+ L +F++G+ PI+ AT VAARGL
Sbjct: 478 VFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGL 537
Score = 142 (55.0 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P+P+ F D+ + +M I+ + + PTP+Q P+ RDL+ A+TG
Sbjct: 196 VEATGHNGPQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTG 255
Query: 147 SGKTLAYLLPAIVHV 161
SGKT A+LLP + +
Sbjct: 256 SGKTAAFLLPVLSQI 270
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 138/335 (41%), Positives = 202/335 (60%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G DVP PV +F D+ D + I + + PTP+Q P+ L RDL+ A+TG
Sbjct: 139 VETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTG 198
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG-----PIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+ P I + + G P ++L+PTRELA QI E+ KF + +
Sbjct: 199 SGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGV 258
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
K YGG P Q+R+L++G +I++ATPGRL D+LE +++ + +L LDEADRMLDM
Sbjct: 259 KVVVAYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM 318
Query: 262 GFEPQIKKILSQI----RPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHA 317
GFEPQI+KI+ Q+ R RQT+ +SAT+P +++ LA ++ N + +G +
Sbjct: 319 GFEPQIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVG-SSTDL 377
Query: 318 IRQHVDIVSESQKYNKLVKLLE---DIMDGSRI-LIFMDTKKGCDQITRQLRMDGWPALS 373
I Q V+ V ES K + L+ LL + D + L+F++TK+G D + L M+ +PA S
Sbjct: 378 ITQRVEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATS 437
Query: 374 IHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
IHGD++Q ER+ L FK G++PI+ ATDVAARGL
Sbjct: 438 IHGDRTQQEREVALRSFKTGRTPILVATDVAARGL 472
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 150/370 (40%), Positives = 216/370 (58%)
Query: 64 YVESPSVAAMSXXXXXXXXXXXXITVEGRDVP--KPVKSFRDVGFPDYVMQEISKAGFFE 121
Y +S ++++S ITVE +P+ SF V + ++SK F +
Sbjct: 118 YTQSSKLSSVSQSDIDKFLSDNEITVEDPSSSSLRPILSFDQVQLTSAITSKLSK--FDK 175
Query: 122 PTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPI--VLVLA 179
PTPIQ+ WP L G+D+IG+AETGSGKT A+ +PAI ++ + G+ VL ++
Sbjct: 176 PTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGVPAINNI-----ITTGNTKTLSVLCIS 230
Query: 180 PTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
PTRELA+QI + A S + +YGGV K Q+R + K +V+ATPGRL+D++
Sbjct: 231 PTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQIRKI-KTANVVVATPGRLVDLIND 289
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQI-RPDRQTLYWSATWPKEVEHLARQY 298
NL +V YLVLDEADRML+ GFE IK I+S +RQTL ++ATWPKEV LA +
Sbjct: 290 GAINLGKVNYLVLDEADRMLEKGFEEDIKTIISNTSNSERQTLMFTATWPKEVRELANNF 349
Query: 299 LYNPYKVIIGSPD-LKANHAIRQHVDIVSESQKYNKLVKLLEDI----MDGSRILIFMDT 353
+ +P KV +G D L AN I Q V+++++ K KL++LL ++ILIF
Sbjct: 350 MNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLIQLLRKYNANESSDNKILIFALY 409
Query: 354 KKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNCAC 413
KK +I L+ + + +IHGD SQ +R LS FK+G+S ++ ATDVAARGL
Sbjct: 410 KKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNV 469
Query: 414 VIIVLCTFVL 423
+++ TF L
Sbjct: 470 KVVINLTFPL 479
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 146/346 (42%), Positives = 205/346 (59%)
Query: 87 ITVEGRD-VPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAET 145
I++E + + P+ SF DV D ++ I A + +PTP+Q P+ LK RDL+ A+T
Sbjct: 234 ISIETSEHICAPLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQT 293
Query: 146 GSGKTLAYLLPAIVHV------NAQPFLAPGDG----PIVLVLAPTRELAVQIQQESTKF 195
GSGKT A+L P I + A P PG P LVLAPTRELA QI E+ KF
Sbjct: 294 GSGKTAAFLFPIISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKF 353
Query: 196 GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEA 255
S + S IYGG Q+ +L +G +I++AT GRL+D+L +L ++ YLVLDEA
Sbjct: 354 SYGSPVSSVVIYGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEA 413
Query: 256 DRMLDMGFEPQIKKILSQI-RP---DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPD 311
DRMLDMGFEPQI++I+S+ P DRQTL +SAT+PK++++LA +LYN + +G
Sbjct: 414 DRMLDMGFEPQIRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVG 473
Query: 312 LKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPA 371
N I Q ++ V E K + L+ L + LIF++TK+ CD +T L +P
Sbjct: 474 TTQN--ITQRIEYVVEEDKNSYLLDYLSGLKSDGLCLIFVETKRSCDTLTYFLNQRNFPT 531
Query: 372 LSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL--GNCACVI 415
IHGD +Q ER+ L F++ +P + ATD+A+RGL GN VI
Sbjct: 532 TCIHGDLTQPERENALQSFRSFATPFLVATDIASRGLHIGNVNLVI 577
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 145/342 (42%), Positives = 205/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P+ ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 169 VEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 228
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + PG+ PI LVLAPTRELAVQI +
Sbjct: 229 SGKTAAFLLPILSQIYTD---GPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYE 285
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 286 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 345
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 346 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 405
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V ES K + L+ LL S L+F++TKKG D + L
Sbjct: 406 VGRVGSTSEN-ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYH 464
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 465 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 506
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 145/332 (43%), Positives = 203/332 (61%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ +EG+ P P + F D FP + Q I + GF PT IQ Q WP+ L G DL+G+A TG
Sbjct: 100 VLIEGKSQPNPFQKFTDYEFPR-MFQHIFQ-GFTAPTVIQGQSWPIILGGNDLVGLAATG 157
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG--PIVLVLAPTRELAVQIQQESTKFGASSKIKST 204
SGKTLA+LLPA++ + + P P G P+VLV+APTRELA QI++ + I+
Sbjct: 158 SGKTLAFLLPALLKIISLP-KRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQL 216
Query: 205 CIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFE 264
C YGG+ K Q R L+ GV+IVI TPGRL D+L H+ L V YLVLDEADRMLDMGF
Sbjct: 217 CAYGGLGKIDQSRILRNGVDIVIGTPGRLNDLLRKHH--LSSVQYLVLDEADRMLDMGFM 274
Query: 265 PQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHV-- 322
PQI+ ++ QI +RQTL +SATWPKEV+ LA ++L +P K+ +GS +L + + QH+
Sbjct: 275 PQIESLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHIVN 334
Query: 323 -----DIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMD-GWPALSIHG 376
D+ S+ Y+++ K+L + +++F + K CD L ++ +H
Sbjct: 335 IDDLSDLQSDDLIYDEINKILTADPTNT-VIVFCNEKYKCDDFQHYLSTQKNVKSIVLHS 393
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
K Q R+ L F+ + I+ ATDVAARGL
Sbjct: 394 GKDQRMRESGLKLFRDHRIRILIATDVAARGL 425
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 145/342 (42%), Positives = 205/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 167 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 226
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + PG+ PI LVLAPTRELAVQI +
Sbjct: 227 SGKTAAFLLPILSQIYTD---GPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 284 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 343
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V E+ K + L+ LL S IL+F++TKKG D + L
Sbjct: 404 VGRVGSTSEN-ITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYH 462
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 463 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 504
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 145/342 (42%), Positives = 205/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 166 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 225
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + PG+ PI LVLAPTRELAVQI +
Sbjct: 226 SGKTAAFLLPILSQIYTD---GPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYE 282
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 283 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 342
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 343 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 402
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V E+ K + L+ LL S IL+F++TKKG D + L
Sbjct: 403 VGRVGSTSEN-ITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLYH 461
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 462 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 503
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 144/336 (42%), Positives = 204/336 (60%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G+DVP+P+ F + +M+ I A F +PTP+Q P+ KGRDL+ A+TG
Sbjct: 142 VDASGKDVPEPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTG 201
Query: 147 SGKTLAYLLPAIVHV----------NAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFG 196
SGKT +L P + AQ F + P LVLAPTRELA QI +E+ KF
Sbjct: 202 SGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFT 261
Query: 197 ASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEAD 256
S ++ +YGG P G Q+R++ +G ++++ATPGRL D+LE +L + YLVLDEAD
Sbjct: 262 YRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEAD 321
Query: 257 RMLDMGFEPQIKKILSQI-RP---DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDL 312
RMLDMGFEPQI+ I+ + P +RQTL +SAT+P +++HLAR +L N + +G
Sbjct: 322 RMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGS 381
Query: 313 KANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 372
+ + I Q + V + K + L+ LL G LIF++TK+ DQ+T L M + A
Sbjct: 382 TSEN-ITQRILYVDDMDKKSALLDLLSAEHKGLT-LIFVETKRMADQLTDFLIMQNFKAT 439
Query: 373 SIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+IHGD++QAER+ LS FKA + I+ AT VAARGL
Sbjct: 440 AIHGDRTQAERERALSAFKANVADILVATAVAARGL 475
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 146/342 (42%), Positives = 204/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 146 VEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 205
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + A PGD PI LVLAPTRELAVQI +
Sbjct: 206 SGKTAAFLLPILSQIYAD---GPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 262
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 263 EARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 322
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 323 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 382
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V E K + L+ LL S L+F++TKKG D + L
Sbjct: 383 VGRVGSTSEN-ITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYH 441
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 442 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 483
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 145/342 (42%), Positives = 205/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 167 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 226
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + + PG+ PI LVLAPTRELAVQI +
Sbjct: 227 SGKTAAFLLPILSQIYSD---GPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 284 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 343
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V ES K + L+ LL S L+F++TKKG D + L
Sbjct: 404 VGRVGSTSEN-ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYH 462
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 463 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 504
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 145/342 (42%), Positives = 205/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + + PG+ PI LVLAPTRELAVQI +
Sbjct: 228 SGKTAAFLLPILSQIYSD---GPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V ES K + L+ LL S L+F++TKKG D + L
Sbjct: 405 VGRVGSTSEN-ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYH 463
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 464 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 145/342 (42%), Positives = 205/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + + PG+ PI LVLAPTRELAVQI +
Sbjct: 228 SGKTAAFLLPILSQIYSD---GPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V ES K + L+ LL S L+F++TKKG D + L
Sbjct: 405 VGRVGSTSEN-ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYH 463
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 464 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 145/342 (42%), Positives = 205/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + + PG+ PI LVLAPTRELAVQI +
Sbjct: 228 SGKTAAFLLPILSQIYSD---GPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V ES K + L+ LL S L+F++TKKG D + L
Sbjct: 405 VGRVGSTSEN-ITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYH 463
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 464 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 145/342 (42%), Positives = 204/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 168 VEVTGNNCPPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + PG+ PI LVLAPTRELAVQI +
Sbjct: 228 SGKTAAFLLPILSQIYTD---GPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V E+ K + L+ LL S L+F++TKKG D + L
Sbjct: 405 VGRVGSTSEN-ITQKVVWVEEADKRSFLLDLLNATGTDSLTLVFVETKKGADSLEDFLYH 463
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 464 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 146/344 (42%), Positives = 206/344 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 210 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 269
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + + PG+ PI LVLAPTRELAVQI +
Sbjct: 270 SGKTAAFLLPILSQIYSD---GPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 326
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 327 EARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 386
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 387 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 446
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG--SRILIFMDTKKGCDQITRQL 364
+G + + I Q V V ES K + L+ LL G S L+F++TKKG D + L
Sbjct: 447 VGRVGSTSEN-ITQKVVWVEESDKRSFLLDLLNATESGKDSLTLVFVETKKGADSLEDFL 505
Query: 365 RMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 506 YHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 549
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 145/342 (42%), Positives = 204/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + A PG+ PI LVLAPTRELAVQI +
Sbjct: 228 SGKTAAFLLPILSQIYAD---GPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V E K + L+ LL S L+F++TKKG D + L
Sbjct: 405 VGRVGSTSEN-ITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYH 463
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 464 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 145/342 (42%), Positives = 204/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 168 VEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 227
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + A PG+ PI LVLAPTRELAVQI +
Sbjct: 228 SGKTAAFLLPILSQIYAD---GPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 284
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 285 EARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 344
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 345 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 404
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V E K + L+ LL S L+F++TKKG D + L
Sbjct: 405 VGRVGSTSEN-ITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYH 463
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 464 EGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 145/340 (42%), Positives = 205/340 (60%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P ++SF DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 144 VEATGSNCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 203
Query: 147 SGKTLAYLLPAIVHVNAQ-P-----FLAPGDG--------PIVLVLAPTRELAVQIQQES 192
SGKT A+LLP + + A P + +G PI LVLAPTRELAVQI +E+
Sbjct: 204 SGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELAVQIYEEA 263
Query: 193 TKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVL 252
KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L YLVL
Sbjct: 264 RKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVL 323
Query: 253 DEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVIIG 308
DEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L + +G
Sbjct: 324 DEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG 383
Query: 309 SPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDG 368
+ + I Q V V E K + L+ LL S L+F++TKKG D + L +G
Sbjct: 384 RVGSTSEN-ITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYHEG 442
Query: 369 WPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 443 YACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 482
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 132/313 (42%), Positives = 196/313 (62%)
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
+ F+ +G ++ ++KAG+ PTPIQ Q P+ ++GRD++G+A+TG+GKTLA+ P
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65
Query: 158 IVHV--NAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQ 215
+ + NA P AP G VLVLAPTRELA QI +GA ++ + GG G Q
Sbjct: 66 LDRLSRNASP--APVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQ 123
Query: 216 VRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIR 275
+R L++G I++ATPGRLID++E +L +V L+LDEAD+MLD+GF ++ I +
Sbjct: 124 IRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVP 183
Query: 276 PDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLV 335
RQTL++SAT PK VE LA +L NP +V + P A I Q V V + +K + L+
Sbjct: 184 SKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGR-IEQRVCFVEQPEKASLLI 242
Query: 336 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKS 395
+ + D S I +F TK G D + ++L +++IHG+KSQ++R+ L FKAG+
Sbjct: 243 EKIRDPELRSAI-VFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRV 301
Query: 396 PIMTATDVAARGL 408
PI+ ATD+AARG+
Sbjct: 302 PILVATDIAARGI 314
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 137/326 (42%), Positives = 201/326 (61%)
Query: 94 VPKPVKSFRDV-GFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLA 152
+P PV SF G +M EI K GF +P+PIQ+Q WP+ L G+D IG+++TGSGKTLA
Sbjct: 78 IPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLA 137
Query: 153 YLLPAIVHVNAQ-PFLAPGD-----GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCI 206
+LLPA++H++AQ D P VLVL+PTRELA QI+ E K+ + KS C+
Sbjct: 138 FLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNG-YKSVCL 196
Query: 207 YGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQ 266
YGG + QV + GVEIVIATPGRL D+ +L VTY+VLDEADRMLDMGFE
Sbjct: 197 YGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVA 256
Query: 267 IKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVS 326
I++IL +IRPDR SATWP+ V L +Y + GS DL + ++ Q + V
Sbjct: 257 IRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVP 316
Query: 327 ESQKYNKLVKLLEDIM--DGS--RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAE 382
++ ++ +++ + G +++IF+ +K D ++ M G + +HG +SQ++
Sbjct: 317 HDSRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSD 376
Query: 383 RDWVLSEFKAGKSPIMTATDVAARGL 408
R+ L+ ++G+ I+ ATD+A+RG+
Sbjct: 377 REMSLNMLRSGEVQILVATDLASRGI 402
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 137/332 (41%), Positives = 198/332 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I V G D+P P+K+F+D+ FP V+ + + G +PTPIQ QG P+ L GRD+IGIA TG
Sbjct: 134 IIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTG 193
Query: 147 SGKTLAYLLPAIVHVNAQPFLAP---GDGPIVLVLAPTRELAVQIQQESTKFGAS----- 198
SGKTL ++LP I+ + + P G+GPI L++ P+RELA Q + +F A
Sbjct: 194 SGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAG 253
Query: 199 -SKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADR 257
++S GG+ Q+ +++GV IV+ATPGRL DML +L YL LDEADR
Sbjct: 254 YPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADR 313
Query: 258 MLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHA 317
++D+GFE I+++ + RQTL +SAT P +++ AR L P V +G AN
Sbjct: 314 LVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGA-ANLD 372
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCDQITRQLRMDGWPALSIHG 376
+ Q V+ V + K +V LLE + S +LIF + K D I L + G A++IHG
Sbjct: 373 VIQEVEYVKQEAK---IVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHG 429
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
K Q +R++ +S FKAGK ++ ATDVA++GL
Sbjct: 430 GKDQEDREYAISSFKAGKKDVLVATDVASKGL 461
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 142/336 (42%), Positives = 206/336 (61%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G VP ++ F + GF VM+ ++++G+ +PTP+Q P L RDL+ A+TG
Sbjct: 127 VEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTG 186
Query: 147 SGKTLAYLLPAIVHVNAQ-PFLA--PG--DG-----PIVLVLAPTRELAVQIQQESTKFG 196
SGKT A+LLP I H+ A P + P +G P LVL+PTRELA+QI +E+TKF
Sbjct: 187 SGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFS 246
Query: 197 ASSKIKSTCIYGGVPK-GPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEA 255
S I++ +YGG QV L+ G I+IATPGRLID++E L YLVLDEA
Sbjct: 247 YKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEA 306
Query: 256 DRMLDMGFEPQIKKILSQIRPD---RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDL 312
DRMLDMGFEPQI+KI+ Q P R T +SAT+PKE++ LA+ +L + Y +
Sbjct: 307 DRMLDMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVG 366
Query: 313 KANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 372
+ I Q + V+E +K + L+++L + + +L+F++TK+G +++ L ++
Sbjct: 367 STSENIEQRLLWVNEMEKRSNLMEILMNEHSENLVLVFVETKRGANELAYFLNRQQIRSV 426
Query: 373 SIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
SIHGD Q ER+ L F++G+ PI+ AT VAARGL
Sbjct: 427 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGL 462
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 142/343 (41%), Positives = 205/343 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKG-RDLIGIAET 145
+ G + P +++F D+ + +M I + PTP+Q P+ +KG RDL+ A+T
Sbjct: 163 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPI-IKGKRDLMACAQT 221
Query: 146 GSGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQ 189
GSGKT A+LLP + + PG+ PI LVLAPTRELAVQI
Sbjct: 222 GSGKTAAFLLPILSQIYTD---GPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 278
Query: 190 QESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTY 249
+E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L Y
Sbjct: 279 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 338
Query: 250 LVLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKV 305
LVLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 339 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFL 398
Query: 306 IIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLR 365
+G + + I Q V V + K + L+ +L S L+F++TKKG D + L
Sbjct: 399 AVGRVGSTSEN-ITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLY 457
Query: 366 MDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 458 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 500
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 142/343 (41%), Positives = 205/343 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKG-RDLIGIAET 145
+ G + P +++F D+ + +M I + PTP+Q P+ +KG RDL+ A+T
Sbjct: 166 VEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPI-IKGKRDLMACAQT 224
Query: 146 GSGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQ 189
GSGKT A+LLP + + PG+ PI LVLAPTRELAVQI
Sbjct: 225 GSGKTAAFLLPILSQIYTD---GPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIY 281
Query: 190 QESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTY 249
+E+ KF S+++ +YGG G Q+RDL++G +++ATPGRL+DM+E L Y
Sbjct: 282 EEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKY 341
Query: 250 LVLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKV 305
LVLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 342 LVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFL 401
Query: 306 IIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLR 365
+G + + I Q V V + K + L+ +L S L+F++TKKG D + L
Sbjct: 402 AVGRVGSTSEN-ITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLY 460
Query: 366 MDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+G+ SIHGD+SQ +R+ L +F++GKSPI+ AT VAARGL
Sbjct: 461 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 503
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 138/332 (41%), Positives = 195/332 (58%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
ITV G D+P P+K+F D+ FP +++ + G PTPIQ QG P+ L GRD+IGIA TG
Sbjct: 85 ITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTG 144
Query: 147 SGKTLAYLLPAIVHVNAQPFLAP---GDGPIVLVLAPTRELAVQIQQESTKFGAS----- 198
SGKTL ++LP I+ + + P G+GPI LV+ P+RELA Q +F AS
Sbjct: 145 SGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDG 204
Query: 199 -SKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADR 257
+++S GGV Q+ ++KGV IV+ATPGRL D+L +L L LDEADR
Sbjct: 205 YPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADR 264
Query: 258 MLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHA 317
++D+GFE I+ + + RQTL +SAT P +++ A L P V +G AN
Sbjct: 265 LVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGA-ANLD 323
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCDQITRQLRMDGWPALSIHG 376
+ Q V+ V + K +V LLE + + +LIF + K D I L + G A++IHG
Sbjct: 324 VIQEVEYVKQEAK---IVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHG 380
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
K Q +RD+ +S FKAGK ++ ATDVA++GL
Sbjct: 381 GKDQEDRDYAISLFKAGKKDVLVATDVASKGL 412
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 138/336 (41%), Positives = 204/336 (60%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G+DVP+P+ F +++ I A F +PTP+Q P+ GRDL+ A+TG
Sbjct: 130 VDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTG 189
Query: 147 SGKTLAYLLPAIVHV-----NAQP-----FLAPGDGPIVLVLAPTRELAVQIQQESTKFG 196
SGKT +L P + + QP F P +++APTRELA QI E+ KF
Sbjct: 190 SGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFT 249
Query: 197 ASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEAD 256
S +K+ +YGG P G Q+R++++G ++++ATPGRL D+LE +L V YLVLDEAD
Sbjct: 250 YRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEAD 309
Query: 257 RMLDMGFEPQIKKILSQ--IRP--DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDL 312
RMLDMGFEPQI+ I+ + P +RQTL +SAT+P +++HLAR +L + + +G
Sbjct: 310 RMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGS 369
Query: 313 KANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 372
+ + I Q V V K + L+ LL DG LIF++TK+ DQ+T L M + A
Sbjct: 370 TSEN-ITQKVLYVENQDKKSALLDLLSASTDGLT-LIFVETKRMADQLTDFLIMQNFRAT 427
Query: 373 SIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+IHGD++Q+ER+ L+ F++G + ++ AT VAARGL
Sbjct: 428 AIHGDRTQSERERALAAFRSGAATLLVATAVAARGL 463
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 140/342 (40%), Positives = 203/342 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G++VP + SF DV + + ++ A + +PTP+Q P+ + GRDL+ A+TG
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTG 342
Query: 147 SGKTLAYLLPAIV------HV----NAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFG 196
SGKT A+L+P + HV + + + P+ LVLAPTRELA QI +E+ KF
Sbjct: 343 SGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFA 402
Query: 197 ASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEAD 256
S+++ +YGG Q+R+L +G +++ATPGRL DM+ L + +LVLDEAD
Sbjct: 403 YRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEAD 462
Query: 257 RMLDMGFEPQIKKILSQIR-P---DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDL 312
RMLDMGFEPQI++I+ Q+ P RQTL +SAT+PK+++ LA +L N + +G
Sbjct: 463 RMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGS 522
Query: 313 KANHAIRQHVDIVSESQKYNKLVKLLEDIMDG------SRILIFMDTKKGCDQITRQLRM 366
+ + I Q + V E K + L+ LL I DG S LIF++TKKG D + L
Sbjct: 523 TSEN-ITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQ 581
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
P SIHGD++Q ER+ L F++G PI+ AT VAARGL
Sbjct: 582 CNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGL 623
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 412 (150.1 bits), Expect = 2.2e-59, Sum P(2) = 2.2e-59
Identities = 84/191 (43%), Positives = 121/191 (63%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I+++G D+P P++++ + G P +++ + K + EP+ IQ P+ L+ +DLIGIAETG
Sbjct: 237 ISIKGDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETG 296
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGD---GPIVLVLAPTRELAVQIQQESTKFGASSKIKS 203
SGKT A+++P I+ ++ P L + GP +VLAPTRELA QIQ E KF +
Sbjct: 297 SGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRC 356
Query: 204 TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGF 263
+ GG Q + +G IV+ATPGRL+D LE L + TY+V+DEADRMLDMGF
Sbjct: 357 VSVVGGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGF 416
Query: 264 EPQIKKILSQI 274
E + KILS +
Sbjct: 417 EDDVNKILSSL 427
Score = 224 (83.9 bits), Expect = 2.2e-59, Sum P(2) = 2.2e-59
Identities = 46/132 (34%), Positives = 82/132 (62%)
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSE-SQKYNKLVK 336
RQT+ +SAT P V +LA+ YL P + IG+ +A + Q V+++S+ S+K+ ++ +
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIG-QAVDRVEQRVEMISDDSKKWRRVEE 508
Query: 337 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
+LE I+IF++ K+ + I +QL GW A+++HG KSQ +R+ + + + +
Sbjct: 509 ILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTAD 568
Query: 397 IMTATDVAARGL 408
I+ ATD+A RG+
Sbjct: 569 ILVATDIAGRGI 580
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 138/342 (40%), Positives = 200/342 (58%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P +++F D+ + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 167 VEATGNNCPPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 226
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SGKT A+LLP + + PG+ PI LVLAPTRELAVQI +
Sbjct: 227 SGKTAAFLLPILSQIYTD---GPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 283
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 284 EARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 343
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 344 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 403
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V E K + L+ LL S L+F++TKKG D + L
Sbjct: 404 VGRVGSTSEN-ITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLFQ 462
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ + SIHGD+SQ +R+ L +F++G+ PI+ AT VAARGL
Sbjct: 463 ERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGL 504
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 135/332 (40%), Positives = 198/332 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + H + A F + P +++APTREL QI E+ KF + +
Sbjct: 337 SGKTAAFLLPILAHMMHDGITASRFKELQE-PECIIVAPTRELINQIYLEARKFSFGTCV 395
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
++ IYGG G +R + +G I+ ATPGRL+D++ LR+V YLVLDEADRMLDM
Sbjct: 396 RAVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDM 455
Query: 262 GFEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANH 316
GF P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 456 GFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACR 514
Query: 317 AIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 376
++Q + V + K KLV++L I D R ++F++TKK D I L + SIHG
Sbjct: 515 DVQQTILQVGQYSKREKLVEILRSIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHG 573
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 574 DREQREREQALGDFRCGKCPVLVATSVAARGL 605
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 134/332 (40%), Positives = 199/332 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 277 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + H + A F + P +++APTREL QI E+ KF + +
Sbjct: 337 SGKTAAFLLPILAHMMHDGITASCFKELQE-PECIIVAPTRELVNQIYLEARKFSFGTCV 395
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
++ IYGG G +R + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDM
Sbjct: 396 RAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDM 455
Query: 262 GFEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANH 316
GF P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 456 GFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACR 514
Query: 317 AIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 376
++Q V V + K KLV++L +I D R ++F++TKK D I L + SIHG
Sbjct: 515 DVQQTVLQVGQFSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHG 573
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 574 DREQREREQALGDFRCGKCPVLVATSVAARGL 605
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 133/331 (40%), Positives = 197/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 250 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 309
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPG----DGPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKT A+LLP + H+ A P +++APTREL QI E+ KF + ++
Sbjct: 310 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 369
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+ IYGG G +R + +G I+ ATPGRL+D++ L++V YLVLDEADRMLDMG
Sbjct: 370 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 429
Query: 263 FEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANHA 317
F P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 430 FGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 488
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
++Q + V + K KLV++L +I D R ++F++TKK D I L + SIHGD
Sbjct: 489 VQQSILQVGQYSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHGD 547
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 548 REQREREQALGDFRCGKCPVLVATSVAARGL 578
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 134/332 (40%), Positives = 199/332 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 256 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 315
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + H + A F + P +++APTREL QI E+ KF + +
Sbjct: 316 SGKTAAFLLPILAHMMHDGITASRFKELQE-PECIIVAPTRELVNQIYLEARKFSFGTCV 374
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
++ IYGG G +R + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDM
Sbjct: 375 RAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDM 434
Query: 262 GFEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANH 316
GF P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 435 GFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACR 493
Query: 317 AIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 376
++Q V V + K KLV++L +I D R ++F++TKK D I L + SIHG
Sbjct: 494 DVQQTVLQVGQFSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHG 552
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 553 DREQREREQALGDFRFGKCPVLVATSVAARGL 584
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 134/332 (40%), Positives = 199/332 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 276 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 335
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + H + A F + P +++APTREL QI E+ KF + +
Sbjct: 336 SGKTAAFLLPILAHMMHDGITASRFKELQE-PECIIVAPTRELVNQIYLEARKFSFGTCV 394
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
++ IYGG G +R + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDM
Sbjct: 395 RAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDM 454
Query: 262 GFEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANH 316
GF P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 455 GFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVG-GACR 513
Query: 317 AIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 376
++Q V V + K KLV++L +I D R ++F++TKK D I L + SIHG
Sbjct: 514 DVQQTVLQVGQFSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHG 572
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 573 DREQREREQALGDFRFGKCPVLVATSVAARGL 604
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 134/331 (40%), Positives = 196/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 249 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 308
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPG----DGPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKT A+LLP + H+ A P +++APTREL QI E+ KF + ++
Sbjct: 309 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 368
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+ IYGG G VR + +G I+ ATPGRL+D++ L++V YLVLDEADRMLDMG
Sbjct: 369 AVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 428
Query: 263 FEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANHA 317
F P++KK++S + RQTL +SAT+P+E++ LA +L + Y V +G A
Sbjct: 429 FGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVGQVG-GACRD 487
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
++Q + V + K KLV++L +I D R ++F++TKK D I L + SIHGD
Sbjct: 488 VQQTILQVGQYSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHGD 546
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 547 REQREREQALGDFRCGKCPVLVATSVAARGL 577
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 135/338 (39%), Positives = 206/338 (60%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G DVP+PV +F + D+++ I+ A + PTP+Q P+ + GRDL+ A+TG
Sbjct: 174 VEASGHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTG 233
Query: 147 SGKTLAYLLPAI--VHVN---AQPFLAPGD-G------PIVLVLAPTRELAVQIQQESTK 194
SGKT +L P + + N A P A G G P L+LAPTREL QI E+ K
Sbjct: 234 SGKTGGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEARK 293
Query: 195 FGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDE 254
F S ++ +YGG G Q+R +++G ++++ATPGRL+D++E +L + YL+LDE
Sbjct: 294 FAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDE 353
Query: 255 ADRMLDMGFEPQIKKILS-QIRP---DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSP 310
ADRMLDMGFEPQI++I+ + P DRQTL +SAT+P++++ LAR +L + + +G
Sbjct: 354 ADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRV 413
Query: 311 DLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWP 370
+ + I Q V+ V + K + L+ +L LIF++TK+ D ++ L +P
Sbjct: 414 GSTSEN-ITQKVEYVEDHDKRSVLLDILHTHGTTGLTLIFVETKRMADALSEFLINQRFP 472
Query: 371 ALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
A +IHGD++Q ER+ L F++G+ PI+ AT VAARGL
Sbjct: 473 ATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGL 510
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 139/312 (44%), Positives = 187/312 (59%)
Query: 118 GFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLV 177
GF PT IQ+ WP+ GRD+IGIAETGSGKTLA+ LP + V P+ +V
Sbjct: 92 GFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVV 151
Query: 178 LAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDML 237
++PTRELA+QI + KF I+ CI+GGV K Q R+ K +V+ATPGRL D+
Sbjct: 152 ISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ-REALKSAAVVVATPGRLKDLQ 210
Query: 238 ESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD-RQTLYWSATWPKEVEHLAR 296
+ +L RV YLVLDEADRMLD GFE IK I+S + RQT+ ++ATWP V +LA
Sbjct: 211 NDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLAS 270
Query: 297 QYLYNPYKVIIG---SPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGS--RILIFM 351
++ +P V IG S D +AN I+Q V++V +K +LV++L G+ ++L F
Sbjct: 271 TFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLVQILNRHQRGTPDKVLAFC 330
Query: 352 DTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLGNC 411
KK ++ R LR G+ IHGD SQ ER L FK+G + ++ ATDVAARGL
Sbjct: 331 LYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLDIP 390
Query: 412 ACVIIVLCTFVL 423
++V TF L
Sbjct: 391 HVKLVVNVTFPL 402
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 133/331 (40%), Positives = 196/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ GRDL+ A+TG
Sbjct: 278 VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTG 337
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPG----DGPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKT A+LLP + H+ A P +++APTREL QI E+ KF + ++
Sbjct: 338 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 397
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+ IYGG G +R + +G I+ ATPGRL+D++ LR+V YLVLDEADRMLDMG
Sbjct: 398 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMG 457
Query: 263 FEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANHA 317
F P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 458 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 516
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
++Q + V + K KLV++L +I D R ++F++TKK D I L + SIHGD
Sbjct: 517 VQQTILQVGQYSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHGD 575
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 576 REQREREQALGDFRCGKCPVLVATSVAARGL 606
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 133/331 (40%), Positives = 196/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ GRDL+ A+TG
Sbjct: 278 VEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTG 337
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPG----DGPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKT A+LLP + H+ A P +++APTREL QI E+ KF + ++
Sbjct: 338 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 397
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+ IYGG G +R + +G I+ ATPGRL+D++ LR+V YLVLDEADRMLDMG
Sbjct: 398 AVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMG 457
Query: 263 FEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANHA 317
F P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 458 FGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 516
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
++Q + V + K KLV++L +I D R ++F++TKK D I L + SIHGD
Sbjct: 517 VQQTILQVGQYSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHGD 575
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 576 REQREREQALGDFRCGKCPVLVATSVAARGL 606
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 138/342 (40%), Positives = 199/342 (58%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G + P +++F DV + +M I + PTP+Q P+ + RDL+ A+TG
Sbjct: 161 VEATGNNCPPHIENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTG 220
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDG----------------PIVLVLAPTRELAVQIQQ 190
SG T A+LLP + + PG+ PI LVLAPTRELAVQI +
Sbjct: 221 SGCTAAFLLPILSQIYTD---GPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYE 277
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYL 250
E+ KF S+++ +YGG Q+RDL++G +++ATPGRL+DM+E L YL
Sbjct: 278 EARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYL 337
Query: 251 VLDEADRMLDMGFEPQIKKILSQ--IRPD--RQTLYWSATWPKEVEHLARQYLYNPYKVI 306
VLDEADRMLDMGFEPQI++I+ Q + P R T+ +SAT+PKE++ LAR +L +
Sbjct: 338 VLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLA 397
Query: 307 IGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRM 366
+G + + I Q V V E K + L+ LL S L+F++TKKG D + L
Sbjct: 398 VGRVGSTSEN-ITQKVVWVEELDKRSFLLDLLNATGRDSLTLVFVETKKGADSLENFLFQ 456
Query: 367 DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ + SIHGD+SQ +R+ L +F++G+ PI+ AT VAARGL
Sbjct: 457 ERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGL 498
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 134/335 (40%), Positives = 200/335 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 274 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 333
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + H + A F + P +++APTREL QI E+ KF + +
Sbjct: 334 SGKTAAFLLPILAHMMHDGITASRFKELQE-PECIIVAPTRELVNQIYLEARKFSFGTCV 392
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
++ IYGG G +R + +G I+ ATPGRL+D++ L+++ YLVLDEADRMLDM
Sbjct: 393 RAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDM 452
Query: 262 GFEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANH 316
GF P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G +
Sbjct: 453 GFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVG----QVGG 508
Query: 317 AIR--QHVDI-VSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALS 373
A R Q D+ V + K KL+++L +I D R ++F++TKK D I L + S
Sbjct: 509 ACRDVQQADLQVGQYSKREKLLEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTS 567
Query: 374 IHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
IHGD+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 568 IHGDREQREREQALGDFRFGKCPVLVATSVAARGL 602
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 133/331 (40%), Positives = 196/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 320
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPG----DGPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKT A+LLP + H+ A P +++APTREL QI E+ KF + ++
Sbjct: 321 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 380
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+ IYGG G +R + +G I+ ATPGRL+D++ L++V YLVLDEADRMLDMG
Sbjct: 381 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 440
Query: 263 FEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANHA 317
F P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 441 FGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 499
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
++Q + V K KLV++L +I D R ++F++TKK D I L + SIHGD
Sbjct: 500 VQQSILQVGPVFKKRKLVEILRNIGD-ERPMVFVETKKKADFIATFLCQEKISTTSIHGD 558
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 559 REQREREQALGDFRCGKCPVLVATSVAARGL 589
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 133/331 (40%), Positives = 196/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + I+KAG+ + TP+Q P+ L GRDL+ A+TG
Sbjct: 261 VEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 320
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPG----DGPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKT A+LLP + H+ A P +++APTREL QI E+ KF + ++
Sbjct: 321 SGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVR 380
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+ IYGG G +R + +G I+ ATPGRL+D++ L++V YLVLDEADRMLDMG
Sbjct: 381 AVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMG 440
Query: 263 FEPQIKKILS----QIRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANHA 317
F P++KK++S + RQTL +SAT+P+E++ LA ++L + Y V +G A
Sbjct: 441 FGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVG-GACRD 499
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
++Q + V K KLV++L +I D R ++F++TKK D I L + SIHGD
Sbjct: 500 VQQSILQVGPVFKKRKLVEILRNIGD-ERPMVFVETKKKADFIATFLCQEKISTTSIHGD 558
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 559 REQREREQALGDFRCGKCPVLVATSVAARGL 589
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 134/336 (39%), Positives = 203/336 (60%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G VP+P+ SF + +++ I + F +PTP+Q P+ GRDL+ A+TG
Sbjct: 174 VEASGDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTG 233
Query: 147 SGKTLAYLLPAIVHVNAQ-PFLAP-GDG--------PIVLVLAPTRELAVQIQQESTKFG 196
SGKT +L P + + P P +G P +LV+APTREL QI +ES KF
Sbjct: 234 SGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFS 293
Query: 197 ASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEAD 256
S +++ +YGG G Q+R++ +G ++++ATPGRL D+L+ +L + YLVLDEAD
Sbjct: 294 YRSWVRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEAD 353
Query: 257 RMLDMGFEPQIKKILSQI-RP---DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDL 312
RMLDMGFEPQI+ I+ + P DRQTL +SAT+P++++ LAR +L + + +G
Sbjct: 354 RMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGS 413
Query: 313 KANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPAL 372
+ + I Q + V + +K + ++ LL +G I +F +TK+ D + L G+PA
Sbjct: 414 TSEN-ITQKILYVEDDEKKSVILDLLSANENGLTI-VFTETKRMADNLADYLYDQGFPAT 471
Query: 373 SIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+IHGD+SQ ER+ L+ FK G +PI+ AT VAARGL
Sbjct: 472 AIHGDRSQYEREKALAAFKNGAAPILVATAVAARGL 507
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 133/331 (40%), Positives = 196/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ + G D P P+ +F + F + + ISK G+ + TP+Q P+ GRDL+ A+TG
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTG 214
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + V A F + P +++APTREL QI E+ KF + I
Sbjct: 215 SGKTAAFLLPIVDRMMKDGVTASAFQKQQE-PQCIIVAPTRELINQIFLEARKFVYGTCI 273
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
+ IYGG G +R + +G I+ ATPGRL+D++E +L V YLVLDEADRMLDM
Sbjct: 274 RPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDM 333
Query: 262 GFEPQIKKILSQIR-PD---RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHA 317
GF +KK++S P RQTL +SAT+P+EV+ LA ++L Y ++ A
Sbjct: 334 GFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSD 393
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
++Q++ V K +KL+++L+ G R ++F+DTKK D + L + P+ SIHGD
Sbjct: 394 VQQNILQVPRLSKRDKLIEILQST-GGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGD 452
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ L +F++GK I+ AT VA+RGL
Sbjct: 453 REQREREIALRDFRSGKCQILVATSVASRGL 483
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 133/331 (40%), Positives = 196/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ + G D P P+ +F + F + + ISK G+ + TP+Q P+ GRDL+ A+TG
Sbjct: 155 VEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTG 214
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + V A F + P +++APTREL QI E+ KF + I
Sbjct: 215 SGKTAAFLLPIVDRMMKDGVTASAFQKQQE-PQCIIVAPTRELINQIFLEARKFVYGTCI 273
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
+ IYGG G +R + +G I+ ATPGRL+D++E +L V YLVLDEADRMLDM
Sbjct: 274 RPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDM 333
Query: 262 GFEPQIKKILSQIR-PD---RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHA 317
GF +KK++S P RQTL +SAT+P+EV+ LA ++L Y ++ A
Sbjct: 334 GFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSD 393
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
++Q++ V K +KL+++L+ G R ++F+DTKK D + L + P+ SIHGD
Sbjct: 394 VQQNILQVPRLSKRDKLIEILQST-GGERTMVFVDTKKKADYLAAFLCQENLPSTSIHGD 452
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ L +F++GK I+ AT VA+RGL
Sbjct: 453 REQREREIALRDFRSGKCQILVATSVASRGL 483
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 423 (154.0 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 89/191 (46%), Positives = 125/191 (65%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I ++G VP P++ + + + +++ I KA + +PTPIQ Q P+AL+ RDLIGIAETG
Sbjct: 686 IYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETG 745
Query: 147 SGKTLAYLLPAIVHVNAQPFLA---PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKS 203
SGKT A++LP + +V P L DGP LV+AP+RELA+QI +E+ KF + ++
Sbjct: 746 SGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRT 805
Query: 204 TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGF 263
+ GG Q +L++GVEIVI TPGRL D LE T L + Y++LDEADRM+DMGF
Sbjct: 806 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMGF 865
Query: 264 EPQIKKILSQI 274
E + IL +I
Sbjct: 866 EDTVHYILDKI 876
Score = 207 (77.9 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 49/131 (37%), Positives = 77/131 (58%)
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
R T +SAT P VE L+R+YL P + IG P +I Q ++ ++E +K KL ++
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGA-GKRSIEQKLEFLTEGKKKQKLQEI 962
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
LE M I++F++ KK D I++ + + A+++HG K+Q R+ LS FK + I
Sbjct: 963 LE--MYEPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDI 1020
Query: 398 MTATDVAARGL 408
+ ATDVA RG+
Sbjct: 1021 LVATDVAGRGI 1031
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 423 (154.0 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 89/191 (46%), Positives = 125/191 (65%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I ++G VP P++ + + + +++ I KA + +PTPIQ Q P+AL+ RDLIGIAETG
Sbjct: 686 IYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETG 745
Query: 147 SGKTLAYLLPAIVHVNAQPFLA---PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKS 203
SGKT A++LP + +V P L DGP LV+AP+RELA+QI +E+ KF + ++
Sbjct: 746 SGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRT 805
Query: 204 TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGF 263
+ GG Q +L++GVEIVI TPGRL D LE T L + Y++LDEADRM+DMGF
Sbjct: 806 VAVVGGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMGF 865
Query: 264 EPQIKKILSQI 274
E + IL +I
Sbjct: 866 EDTVHYILDKI 876
Score = 207 (77.9 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
Identities = 49/131 (37%), Positives = 77/131 (58%)
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
R T +SAT P VE L+R+YL P + IG P +I Q ++ ++E +K KL ++
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGA-GKRSIEQKLEFLTEGKKKQKLQEI 962
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
LE M I++F++ KK D I++ + + A+++HG K+Q R+ LS FK + I
Sbjct: 963 LE--MYEPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDI 1020
Query: 398 MTATDVAARGL 408
+ ATDVA RG+
Sbjct: 1021 LVATDVAGRGI 1031
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 403 (146.9 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 83/193 (43%), Positives = 118/193 (61%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I +G VP P++S+ + G P +++ + + G+ EPTPIQ P+A++ RDLIG+A TG
Sbjct: 334 IATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTG 393
Query: 147 SGKTLAYLLPAIVHVNAQPFL-----APGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + ++ P + DGP +VLAPTRELA QI+ E+ KF
Sbjct: 394 SGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGF 453
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
I GG Q L+ G EI+IATPGRL+D +E L + Y+++DEADRM+D+
Sbjct: 454 NVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDL 513
Query: 262 GFEPQIKKILSQI 274
GFE + KIL +
Sbjct: 514 GFEEPVNKILDAL 526
Score = 219 (82.2 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 44/132 (33%), Positives = 83/132 (62%)
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVS-ESQKYNKLVK 336
RQT+ ++AT P VE +AR+YL P V IGS +A + Q V++++ E ++ +L +
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAG-EAVDTVEQRVEMIAGEDKRKKRLGE 613
Query: 337 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
+L I++F++ K+ CD I R+++ G+ ++++HG K+Q +R+ L+ + G +
Sbjct: 614 ILSSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTD 673
Query: 397 IMTATDVAARGL 408
++ ATD+A RG+
Sbjct: 674 VLVATDLAGRGI 685
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 133/315 (42%), Positives = 192/315 (60%)
Query: 121 EPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDG-PIVLVLA 179
EPTPIQA WP L GRD++GIAETGSGKT+A+ +PA+ ++N L+ P VLV++
Sbjct: 187 EPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQYLNG---LSDNKSVPRVLVVS 243
Query: 180 PTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
PTRELA+Q + + +K+ +YGG PK Q R K ++I TPGRL+D++
Sbjct: 244 PTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQAR-AAKNASVIIGTPGRLLDLIND 302
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD------RQTLYWSATWPKEVEH 293
+ + +V YLVLDEADRMLD GFE I+ I+S PD RQT+++SATWP+ V
Sbjct: 303 GSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHT-PDPTRNGSRQTVFFSATWPESVRA 361
Query: 294 LARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVK--LLEDIMDGSR---IL 348
LA +L +P K+ IGS +L A+ I Q V+I+ + + +++ L + + G + IL
Sbjct: 362 LAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKIL 421
Query: 349 IFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
IF+ KK ++ L + + IHGD SQ R L++FK+GK P++ ATDVAARGL
Sbjct: 422 IFVLYKKEAARVEGTLARK-YNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGL 480
Query: 409 GNCACVIIVLCTFVL 423
+++ TF L
Sbjct: 481 DIPKVQLVINVTFPL 495
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 133/331 (40%), Positives = 189/331 (57%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I VEG P++SFR++ FP ++ ++ G PTPIQ QG P L GRDLIGIA TG
Sbjct: 165 ILVEGETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTG 224
Query: 147 SGKTLAYLLPAIVHVNAQPFLAP---GDGPIVLVLAPTRELAVQ----IQQESTKFGASS 199
SGKTL ++LP I+ Q + P +GP L++ P+RELA Q IQ S A
Sbjct: 225 SGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACG 284
Query: 200 --KIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADR 257
+I+S GG+P + + +GV IV+ATPGRL+DML+ L YL +DEADR
Sbjct: 285 MPEIRSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADR 344
Query: 258 MLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHA 317
M+DMGFE ++ I S + RQTL +SAT PK++++ AR L P + +G A+
Sbjct: 345 MIDMGFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGA-ASMN 403
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
+ Q V+ V + K L+ L+ +LIF + K+ D I L + G A++IHG
Sbjct: 404 VTQQVEYVKQEAKVVYLLDCLQKT--APPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGG 461
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
K Q ER + ++ GK ++ ATDVA++GL
Sbjct: 462 KDQEERSRAVDAYRVGKKDVLVATDVASKGL 492
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 133/383 (34%), Positives = 216/383 (56%)
Query: 39 KRDYDGAESPRKLDLDGLTPFEKNF-YVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKP 97
K + +P+K D + +P ++ Y E P + + I V+G++V +P
Sbjct: 142 KEEKSKLSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRP 201
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
+ F P+ + + K+G+ PTPIQ Q P+ L GRD++ A+TGSGKT A+LLP
Sbjct: 202 IIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPV 261
Query: 158 IVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGAS-SKIKSTCIYGGVPKGPQV 216
I+ L P L+L PTRELA+QI++++ + + ++K+ + GG+P PQ+
Sbjct: 262 IMRA-----LFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQL 316
Query: 217 RDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRP 276
LQ+ V+++IATPGRL+D+++ + L V +V+DEAD ML MGF+ Q+ IL I
Sbjct: 317 YRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPN 376
Query: 277 DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVK 336
D QT+ SAT P +E LA Q L+NP ++I G +L + +RQ + V + K KL +
Sbjct: 377 DCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCAN-VRQIILWVEDPAKKKKLFE 435
Query: 337 LLEDI-MDGSRILIFMDTKKGCDQITRQL-RMDGWPALSIHGDKSQAERDWVLSEFKAGK 394
+L D + +L+F+D K G D ++ + ++ G ++SIH +KSQ ER +L G
Sbjct: 436 ILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGD 495
Query: 395 SPIMTATDVAARGLGNCACVIIV 417
++ +T V RGL + ++V
Sbjct: 496 YEVVVSTGVLGRGLDLISVRLVV 518
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 133/383 (34%), Positives = 216/383 (56%)
Query: 39 KRDYDGAESPRKLDLDGLTPFEKNF-YVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKP 97
K + +P+K D + +P ++ Y E P + + I V+G++V +P
Sbjct: 142 KEEKSKLSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRP 201
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
+ F P+ + + K+G+ PTPIQ Q P+ L GRD++ A+TGSGKT A+LLP
Sbjct: 202 IIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPV 261
Query: 158 IVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGAS-SKIKSTCIYGGVPKGPQV 216
I+ L P L+L PTRELA+QI++++ + + ++K+ + GG+P PQ+
Sbjct: 262 IMRA-----LFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQL 316
Query: 217 RDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRP 276
LQ+ V+++IATPGRL+D+++ + L V +V+DEAD ML MGF+ Q+ IL I
Sbjct: 317 YRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILENIPN 376
Query: 277 DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVK 336
D QT+ SAT P +E LA Q L+NP ++I G +L + +RQ + V + K KL +
Sbjct: 377 DCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCAN-VRQIILWVEDPAKKKKLFE 435
Query: 337 LLEDI-MDGSRILIFMDTKKGCDQITRQL-RMDGWPALSIHGDKSQAERDWVLSEFKAGK 394
+L D + +L+F+D K G D ++ + ++ G ++SIH +KSQ ER +L G
Sbjct: 436 ILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGD 495
Query: 395 SPIMTATDVAARGLGNCACVIIV 417
++ +T V RGL + ++V
Sbjct: 496 YEVVVSTGVLGRGLDLISVRLVV 518
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 125/330 (37%), Positives = 197/330 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G ++P + +F + + + IS++G+ +PTP+Q G P+ GRDL+ A+TG
Sbjct: 169 VDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLMACAQTG 228
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPG----DGPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKT A+LLP + + A A P +++APTREL QI QE+ KF + ++
Sbjct: 229 SGKTAAFLLPILQQLMADGVAASRFSEIQEPEAVIVAPTRELINQIYQEARKFSFGTCVR 288
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+YGGV G Q+R+++KG ++ TPGRL+DM+ L +V +LVLDEADRMLDMG
Sbjct: 289 PVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGKVGLSKVRHLVLDEADRMLDMG 348
Query: 263 FEPQIKKILSQ----IRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAI 318
FEP +++++ + +RQTL +SAT+P++++ LA +L Y + A +
Sbjct: 349 FEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADFLKVDYLFVAVGVVGGACTDV 408
Query: 319 RQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDK 378
Q V++ K +L+ LL I R ++F++TK+ D I L + P SIHGD+
Sbjct: 409 EQTFLQVTKFNKREQLLDLLRTI-GSERTMVFVETKRQADFIAAFLCQEKVPTTSIHGDR 467
Query: 379 SQAERDWVLSEFKAGKSPIMTATDVAARGL 408
Q ER+ L++F++GK P++ AT VA+RGL
Sbjct: 468 EQREREKALADFRSGKCPVLVATSVASRGL 497
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 130/367 (35%), Positives = 214/367 (58%)
Query: 47 SPRKLDLDGLTPFEKNFYV--ESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDV 104
SP+++ + +P + FYV E P + + I+V+G+DV +P+ F
Sbjct: 150 SPQRVAAEPESPLDA-FYVYKEHPFIVTLKEDQIETLKQQLGISVQGQDVARPIIDFEHC 208
Query: 105 GFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ 164
GFP+ + Q + K+G+ PTPIQ Q P+ L GRD++ A+TGSGKT A+LLP I+ ++
Sbjct: 209 GFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRAFSE 268
Query: 165 PFLAPGDGPIVLVLAPTRELAVQIQQESTKFGAS-SKIKSTCIYGGVPKGPQVRDLQKGV 223
P L+L PTRELA+QI++++ + + ++K+ + GG+P PQ+ L++ V
Sbjct: 269 D-----KTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHV 323
Query: 224 EIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYW 283
+++IATPGRL+D+++ + +L + +V+DEAD ML MGF+ Q+ +L D QT+
Sbjct: 324 KVIIATPGRLLDIIKQSSVSLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTPGDCQTILV 383
Query: 284 SATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDI-M 342
SAT P +E L Q L+NP ++I G +L ++RQ + V + K KL ++L D +
Sbjct: 384 SATIPDSIEQLTDQLLHNPVRIITGDKNLPCA-SVRQIILWVEDPAKKKKLFEILNDQKL 442
Query: 343 DGSRILIFMDTKKGCDQITRQL-RMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTAT 401
+L+F+D K G D ++ + ++ G + SIH +KSQ ER +L G ++ +T
Sbjct: 443 FKPPVLVFVDCKLGADLLSEAVQKITGLNSTSIHSEKSQVERRDILKGLLEGDYEVVVST 502
Query: 402 DVAARGL 408
V RGL
Sbjct: 503 GVLGRGL 509
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 131/333 (39%), Positives = 189/333 (56%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I +G D+P P+ +F+++ P V+ + + G +P+PIQ QG P+ L GRD+IGIA TG
Sbjct: 210 IITDGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTG 269
Query: 147 SGKTLAYLLPAIVHVNAQPFLAP---GDGPIVLVLAPTRELAVQIQQESTKF-------G 196
SGKTL + LP ++ + P G+GP L+L P+RELA Q F G
Sbjct: 270 SGKTLVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVNSFTNALHKNG 329
Query: 197 ASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEAD 256
++++ GG+ Q +KGV ++IATPGRL+D+L N + YL LDEAD
Sbjct: 330 GHPQLRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEAD 389
Query: 257 RMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANH 316
R++D+GFE I+ +L RQTL +SAT PK+++ AR L P +V +G AN
Sbjct: 390 RLIDLGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVNVGRAGA-ANL 448
Query: 317 AIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCDQITRQLRMDGWPALSIH 375
+ Q V+ V K +V LLE + +LIF + KK D I L + A+SIH
Sbjct: 449 NVTQEVEFVKPEAK---IVYLLECLQKTPPPVLIFCENKKDVDDIYEYLLLKQVEAVSIH 505
Query: 376 GDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
GDKSQ ER+ + F+ GK ++ ATDVA++GL
Sbjct: 506 GDKSQDERESAIKAFREGKKDVLVATDVASKGL 538
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 131/375 (34%), Positives = 212/375 (56%)
Query: 47 SPRKLDLDGLTPFEKNF-YVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVG 105
+P K + + +P + Y E P + + I V+G+DV +P+ F G
Sbjct: 151 APHKANSEPESPLNTLYVYKEHPFILNLQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCG 210
Query: 106 FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP 165
FP+ + + +G+ PTPIQ Q P+ L GRD++ A+TGSGKT A+LLP I
Sbjct: 211 FPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRA---- 266
Query: 166 FLAPGDGPIVLVLAPTRELAVQIQQESTKFGAS-SKIKSTCIYGGVPKGPQVRDLQKGVE 224
L P L+L PTRELA+QI+ ++ + + ++K+ + GG+P PQ+ L++ V+
Sbjct: 267 -LCESKTPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVK 325
Query: 225 IVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWS 284
++IATPGRL+D+++ + L + +V+DEAD ML MGF+ Q+ IL + D QT+ S
Sbjct: 326 VIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILVS 385
Query: 285 ATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDI-MD 343
AT P +E LA Q L+NP ++I G +L + ++RQ + V E K KL ++L D +
Sbjct: 386 ATIPTSIEQLASQLLHNPVRIITGEKNLPCS-SVRQIILWVEEPAKKKKLFEILNDKKLF 444
Query: 344 GSRILIFMDTKKGCDQITRQL-RMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATD 402
+L+F+D K G D ++ + ++ G ++SIH +KSQ ER +L G ++ +T
Sbjct: 445 KPPVLVFVDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTG 504
Query: 403 VAARGLGNCACVIIV 417
V RGL + ++V
Sbjct: 505 VLGRGLDLISVRLVV 519
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 131/375 (34%), Positives = 212/375 (56%)
Query: 47 SPRKLDLDGLTPFEKNF-YVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVG 105
+P K + + +P + Y E P + + I V+G+DV +P+ F G
Sbjct: 151 APHKANSEPESPLNTLYVYKEHPFILNLQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCG 210
Query: 106 FPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQP 165
FP+ + + +G+ PTPIQ Q P+ L GRD++ A+TGSGKT A+LLP I
Sbjct: 211 FPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVITRA---- 266
Query: 166 FLAPGDGPIVLVLAPTRELAVQIQQESTKFGAS-SKIKSTCIYGGVPKGPQVRDLQKGVE 224
L P L+L PTRELA+QI+ ++ + + ++K+ + GG+P PQ+ L++ V+
Sbjct: 267 -LCESKTPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGGLPLPPQLYRLRQHVK 325
Query: 225 IVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWS 284
++IATPGRL+D+++ + L + +V+DEAD ML MGF+ Q+ IL + D QT+ S
Sbjct: 326 VIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLDILEHVPNDSQTILVS 385
Query: 285 ATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDI-MD 343
AT P +E LA Q L+NP ++I G +L + ++RQ + V E K KL ++L D +
Sbjct: 386 ATIPTSIEQLASQLLHNPVRIITGEKNLPCS-SVRQIILWVEEPAKKKKLFEILNDKKLF 444
Query: 344 GSRILIFMDTKKGCDQITRQL-RMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATD 402
+L+F+D K G D ++ + ++ G ++SIH +KSQ ER +L G ++ +T
Sbjct: 445 KPPVLVFVDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLEGDYEVVVSTG 504
Query: 403 VAARGLGNCACVIIV 417
V RGL + ++V
Sbjct: 505 VLGRGLDLISVRLVV 519
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 127/331 (38%), Positives = 197/331 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G + PK + +F + G D + + +SK+G+ +PTP+Q G P+ GRDL+ A+TG
Sbjct: 265 VDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTG 324
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + V A F + P +++APTREL QI E+ KF + +
Sbjct: 325 SGKTAAFLLPILQRFMTDGVAASKFSEIQE-PEAIIVAPTRELINQIYLEARKFAYGTCV 383
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
+ +YGG+ G +R++ KG ++ ATPGRL D++ L +V YLVLDEADRMLDM
Sbjct: 384 RPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRGKIGLSKVRYLVLDEADRMLDM 443
Query: 262 GFEPQIKKILSQ----IRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHA 317
GFEP+++K+++ + +RQTL +SAT+P++++ +A +L Y + A
Sbjct: 444 GFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAADFLKVDYIFLAVGVVGGACSD 503
Query: 318 IRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGD 377
+ Q V V + K ++L++LL R ++F++TK+ D I L + SIHGD
Sbjct: 504 VEQTVVQVDQYSKRDQLLELLR-ATGNERTMVFVETKRSADFIATFLCQEKISTTSIHGD 562
Query: 378 KSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ Q ER+ LS+F+ G P++ AT VAARGL
Sbjct: 563 REQREREKALSDFRLGHCPVLVATSVAARGL 593
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 122/311 (39%), Positives = 192/311 (61%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF +G +++ +++ G+ EPTPIQ Q P L+GRDL+ A+TG+GKT + LP +
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 160 H-VNAQPFLAPGDGPI-VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
H + QP A G P+ L+L PTRELA QI + + I+S ++GGV PQ+
Sbjct: 62 HLITRQPH-AKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L+ GV++++ATPGRL+D+ + L +V LVLDEADRMLDMGF I+++L+++
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAK 180
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
RQ L +SAT+ +++ LA + L+NP ++ + + A+ + QHV V + +K L +
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNT-ASDQVTQHVHFVDKKRKRELLSHM 239
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
+ + ++L+F TK G + + QL DG + +IHG+KSQ R L++FK+G +
Sbjct: 240 IGK-GNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298
Query: 398 MTATDVAARGL 408
+ ATD+AARGL
Sbjct: 299 LVATDIAARGL 309
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 127/334 (38%), Positives = 199/334 (59%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I VEGR VP+P+ F GFP+ + + AG+ PTPIQ Q P+ L GRDL+ A+TG
Sbjct: 179 IVVEGRGVPRPIIDFGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTG 238
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKF-GASSKIKSTC 205
SGKT A+LLP I L P LVL PTRELA+QI++++ + G ++++
Sbjct: 239 SGKTAAFLLPVITRA-----LVQSKAPSALVLTPTRELAIQIERQAKELMGGLPRMRTAL 293
Query: 206 IYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEP 265
+ GG+P PQ+ L++ V+++IATPGRL+D+++ + +L + +V+DEAD ML MGF+
Sbjct: 294 LVGGLPAPPQLHRLRQRVQVIIATPGRLLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQE 353
Query: 266 QIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV 325
Q+ +L + D QT+ SAT P +E LA + L++P +V+ G +L ++RQ V V
Sbjct: 354 QVLDVLENVPQDCQTILVSATIPTRIEQLASRLLHDPVRVLAGEKNLPCP-SVRQIVLWV 412
Query: 326 SESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQL-RMDGWPALSIHGDKSQAER 383
E K KL ++L D + +L+F+D K G D ++ + ++ G + S+H +KSQ ER
Sbjct: 413 EEPAKKKKLFEILNDKKLFKPPVLVFVDCKLGADLLSEAVEKITGLKSTSMHSEKSQIER 472
Query: 384 DWVLSEFKAGKSPIMTATDVAARGLGNCACVIIV 417
+L G ++ +T V RGL + ++V
Sbjct: 473 KTILEGLLEGDYDVVVSTGVLGRGLDLISVKLVV 506
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 138/334 (41%), Positives = 193/334 (57%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKA-GFFEPTPIQAQGWPMALKGRDLIGIAET 145
I+ EG +P P+ SF ++ FP +++ + K G PT IQ QG P+AL GRD+IGIA T
Sbjct: 177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIAST 236
Query: 146 GSGKTLAYLLPAIVHVNAQPFLAP---GDGPIVLVLAPTRELAVQIQQESTK-FGASSKI 201
GSGKT+ ++LP ++ Q P +GP L++ P+RELA QI + F A K
Sbjct: 237 GSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKA 296
Query: 202 ------KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEA 255
CI GGVP G Q +D++ G+ IV+ATPGRL DML NL YLVLDEA
Sbjct: 297 GLPEMRAGLCI-GGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEA 355
Query: 256 DRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKAN 315
DRMLDMGFE +IK I + RQTL +SAT P++++ A+ L P V +G A+
Sbjct: 356 DRMLDMGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAGA-AS 414
Query: 316 HAIRQHVDIVSESQKYNKLVKLLEDIMDGS-RILIFMDTKKGCDQITRQLRMDGWPALSI 374
+ Q ++ V NKLV++LE + S ++LIF + K D I L + G SI
Sbjct: 415 LNVLQELEFVRSE---NKLVRVLECLQKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASI 471
Query: 375 HGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
HG K Q++R + F+ + ++ ATDVA++GL
Sbjct: 472 HGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGL 505
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 131/339 (38%), Positives = 200/339 (58%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D+ +PV F +++Q I +G+ +PTP+Q P+ GRDL+ A+TG
Sbjct: 158 VEVSGGDI-EPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTG 216
Query: 147 SGKTLAYLLPAI-VHVNAQPFLAPGD-----G-------PIVLVLAPTRELAVQIQQEST 193
SGKT +L P + + + P P D G P L+LAPTREL QI +ES
Sbjct: 217 SGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESR 276
Query: 194 KFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLD 253
KF S ++ +YGG Q+R + +G +++ ATPGRL+D+++ +L + +LVLD
Sbjct: 277 KFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLD 336
Query: 254 EADRMLDMGFEPQIKKILSQIR----PDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGS 309
EADRMLDMGFEPQI+ I+ +RQTL +SAT+P++++ LAR +L + + +G
Sbjct: 337 EADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGR 396
Query: 310 PDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 369
+ + I Q V V +S+K + L+ +L + LIF++TK+ D +T L +
Sbjct: 397 VGSTSEN-ITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNF 455
Query: 370 PALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
PA SIHGD++Q ER+ L F++G++ IM AT VA+RGL
Sbjct: 456 PATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGL 494
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 124/312 (39%), Positives = 196/312 (62%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF +G +++ I + G+ EPTP+Q Q P+ L+ RD++ A+TG+GKT + LP +
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 160 HVN-AQPFLAPGDGPIV--LVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQV 216
+ ++P L P++ L+L PTRELAVQ+ + +G +K+T ++GGV PQ+
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 217 RDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRP 276
L++GV+I++ATPGRL+D++ NL RV + VLDEADRMLDMGF P I++IL +
Sbjct: 131 NHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPE 190
Query: 277 DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVK 336
RQ L +SAT+ KE++ L + L++P + + + A A HV + Q+ +L+
Sbjct: 191 SRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAA--ARITHVVHPVDRQRKRELLS 248
Query: 337 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
+ + ++L+F TK G +++++QL DG + +IHG+KSQA R L++FK GK
Sbjct: 249 FMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIR 308
Query: 397 IMTATDVAARGL 408
++ ATDVAARGL
Sbjct: 309 VLVATDVAARGL 320
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 124/312 (39%), Positives = 196/312 (62%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF +G +++ I + G+ EPTP+Q Q P+ L+ RD++ A+TG+GKT + LP +
Sbjct: 11 SFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQ 70
Query: 160 HVN-AQPFLAPGDGPIV--LVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQV 216
+ ++P L P++ L+L PTRELAVQ+ + +G +K+T ++GGV PQ+
Sbjct: 71 RLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQI 130
Query: 217 RDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRP 276
L++GV+I++ATPGRL+D++ NL RV + VLDEADRMLDMGF P I++IL +
Sbjct: 131 NHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPE 190
Query: 277 DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVK 336
RQ L +SAT+ KE++ L + L++P + + + A A HV + Q+ +L+
Sbjct: 191 SRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAA--ARITHVVHPVDRQRKRELLS 248
Query: 337 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
+ + ++L+F TK G +++++QL DG + +IHG+KSQA R L++FK GK
Sbjct: 249 FMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIR 308
Query: 397 IMTATDVAARGL 408
++ ATDVAARGL
Sbjct: 309 VLVATDVAARGL 320
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 126/349 (36%), Positives = 201/349 (57%)
Query: 63 FYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEP 122
FY + + ++ I ++G+ VP+P+ F GFP+ + + +G+ P
Sbjct: 173 FYKDHSFILSLQDEQVENLKLQLGIAIQGQQVPRPIIEFEHCGFPETLNSNLKNSGYEVP 232
Query: 123 TPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTR 182
TPIQ Q P+ L GRD++ A+TGSGKT A+LLP I+ V L + P L+LAPTR
Sbjct: 233 TPIQMQMIPVGLLGRDIVASADTGSGKTAAFLLPVIMKV-----LNETETPSALILAPTR 287
Query: 183 ELAVQIQQESTKFGAS-SKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHN 241
ELA+QI++++ + A +++ + GG+P PQ+ L++ V+++IATPGRL+++L +
Sbjct: 288 ELAIQIERQAKELMAGLPNMRTVLLVGGLPLPPQLHRLKQSVKVIIATPGRLLEILRQSS 347
Query: 242 TNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYN 301
L + +V+DE D ML MGF+ Q+ IL I D QT+ SAT P +EHLA Q L+N
Sbjct: 348 VQLHGIKIVVVDEVDTMLKMGFQQQVLDILEDISHDHQTILVSATIPVGIEHLANQLLHN 407
Query: 302 PYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDI-MDGSRILIFMDTKKGCDQI 360
++ IG +L ++ +RQ + V E K KL ++L D + +L+F+D K G D +
Sbjct: 408 FVRITIGEKNLPCSN-VRQIILWVEEPSKKKKLFEILNDKKLFKPPVLVFVDCKLGADLL 466
Query: 361 TRQL-RMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+ + ++ G S+H +KSQ ER +L K ++ +T V RGL
Sbjct: 467 SDAVHKITGLQCTSMHSEKSQVERTAILQGLLQEKYEVIVSTGVLGRGL 515
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 128/332 (38%), Positives = 194/332 (58%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G DVP + +F + D + + + K+G+ + TPIQ P+ + GRDL+ A+TG
Sbjct: 274 VEVSGSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTG 333
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + H V + F + P +++APTREL QI ++ KF + +
Sbjct: 334 SGKTAAFLLPILAHLMVKGVESSAFQTLKE-PEAIIVAPTRELINQIYLDARKFSYGTCV 392
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
+ IYGG ++ + +G I+ ATPGRL+D++ L ++ YLVLDEADRMLDM
Sbjct: 393 RPVVIYGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDM 452
Query: 262 GFEPQIKKILSQI----RPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANH 316
GF I+ +L + +RQTL +SAT+P ++ LAR+ L Y V++G A
Sbjct: 453 GFREDIENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVG-GACS 511
Query: 317 AIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 376
+ Q V V E K +KL+++L++I R ++F+ TKK D I L + P+ SIHG
Sbjct: 512 DVEQMVIEVDEFGKKDKLMEILQEI-GSERTMVFVKTKKKADFIATFLCQEKVPSTSIHG 570
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D+ Q ER+ L +F+ G+ P++ AT VAARGL
Sbjct: 571 DREQKERETALRDFRTGQCPVIVATSVAARGL 602
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 124/332 (37%), Positives = 203/332 (61%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G+DVP + +F + + + + +++AG+ + TP+Q P+ + GRDL+ A+TG
Sbjct: 262 VDVTGKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTG 321
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + + + A +L + P +++APTREL QI ++ KF + +
Sbjct: 322 SGKTAAFLLPILSYMMNEGITASQYLQLQE-PEAIIIAPTRELINQIYLDARKFSYGTCV 380
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
+ +YGG+ +RD++KG I+ ATPGRL+D++ L ++ YLVLDEADRMLDM
Sbjct: 381 RPVVVYGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRMLDM 440
Query: 262 GFEPQIKKILSQ----IRPDRQTLYWSATWPKEVEHLARQYLYNPYK-VIIGSPDLKANH 316
GF P+I+K++++ + RQTL +SAT+P+E+ LA YL + + V++G A
Sbjct: 441 GFAPEIEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVG-GACS 499
Query: 317 AIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHG 376
+ Q V + E+ K KL+++L+ + R +IF++TKK D I L + + + SIHG
Sbjct: 500 DVAQTVLEMRENGKMEKLLEILKS-SEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHG 558
Query: 377 DKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D+ Q +R+ L +F+ GK ++ T VAARGL
Sbjct: 559 DREQYQRESALWDFRTGKCTVIVCTAVAARGL 590
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 136/350 (38%), Positives = 196/350 (56%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
+ AMS I VEG +P P+KSF+++ FP +++ + K G +PTPIQ QG
Sbjct: 148 ILAMSEARHNRVRKKYHILVEGEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQG 207
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 208 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 266
Query: 186 VQ----IQQESTKFGASS--KIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
Q I+ S ++ GG+ Q+ ++ GV +++ATPGRL+D+L+
Sbjct: 267 RQTHGIIEYYCRLLQEDSLPPLRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQK 326
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYL 299
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L
Sbjct: 327 KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 386
Query: 300 YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCD 358
P + +G A+ + Q V+ V E K +V LLE + +LIF + K D
Sbjct: 387 VKPITINVGRAGA-ASLDVVQEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVD 442
Query: 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 443 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGL 492
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 131/333 (39%), Positives = 195/333 (58%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ V G D P + +F + + +I+KAG+ + TP+Q G P+ L GRDL+ A+TG
Sbjct: 254 VEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTPVQKYGIPIILAGRDLMACAQTG 313
Query: 147 SGKTLAYLLPAIVH-----VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKI 201
SGKT A+LLP + H V A F + P +++APTREL QI E+ KF + +
Sbjct: 314 SGKTAAFLLPILAHMMRDGVTASRFKDQQE-PECIIVAPTRELINQIFLEARKFSFGTCV 372
Query: 202 KSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDM 261
+ IYGG G +R + +G I+ ATPGRL+D++ L ++ YLVLDEADRMLDM
Sbjct: 373 RPVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKEKIGLGQIRYLVLDEADRMLDM 432
Query: 262 GFEPQIKKILS----QIRPDRQTLYWSATWPK-EVEHLARQYLYNPYKVIIGSPDLK-AN 315
GF P++KK++S + RQTL +SAT+P+ + A ++L N ++ + A
Sbjct: 433 GFGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWAGEFLKNLTICLVAVGQVGGAC 492
Query: 316 HAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIH 375
++Q V V + K KLV++L +I + R ++F++TKK D I L + SIH
Sbjct: 493 SDVQQTVLQVGQYSKREKLVEILRNIGE-ERTMVFVETKKKADFIATFLCQEKISTTSIH 551
Query: 376 GDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
GD+ Q ER+ L +F+ GK P++ AT VAARGL
Sbjct: 552 GDREQREREQALGDFRCGKCPVLVATSVAARGL 584
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 136/350 (38%), Positives = 196/350 (56%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
V +MS I VEG +P P+KSF+++ FP +++ + K G PTPIQ QG
Sbjct: 152 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQG 211
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 212 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 270
Query: 186 VQ---IQQESTKF---GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
Q I + + +S ++ GG+ Q+ ++ GV +++ATPGRL+D+L+
Sbjct: 271 RQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQK 330
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYL 299
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L
Sbjct: 331 KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
Query: 300 YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCD 358
P + +G + I Q V+ V E K +V LLE + +LIF + K D
Sbjct: 391 VKPVTINVGRAGAASLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVD 446
Query: 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 136/350 (38%), Positives = 196/350 (56%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
V +MS I VEG +P P+KSF+++ FP +++ + K G PTPIQ QG
Sbjct: 152 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQG 211
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 212 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 270
Query: 186 VQ---IQQESTKF---GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
Q I + + +S ++ GG+ Q+ ++ GV +++ATPGRL+D+L+
Sbjct: 271 RQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQK 330
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYL 299
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L
Sbjct: 331 KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
Query: 300 YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCD 358
P + +G + I Q V+ V E K +V LLE + +LIF + K D
Sbjct: 391 VKPVTINVGRAGAASLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVD 446
Query: 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 136/350 (38%), Positives = 196/350 (56%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
V +MS I VEG +P P+KSF+++ FP +++ + K G PTPIQ QG
Sbjct: 152 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQG 211
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 212 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 270
Query: 186 VQ---IQQESTKF---GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
Q I + + +S ++ GG+ Q+ ++ GV +++ATPGRL+D+L+
Sbjct: 271 RQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQK 330
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYL 299
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L
Sbjct: 331 KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
Query: 300 YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCD 358
P + +G + I Q V+ V E K +V LLE + +LIF + K D
Sbjct: 391 VKPVTINVGRAGAASLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVD 446
Query: 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 136/350 (38%), Positives = 196/350 (56%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
V +MS I VEG +P P+KSF+++ FP +++ + K G PTPIQ QG
Sbjct: 179 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQG 238
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 239 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 297
Query: 186 VQ---IQQESTKF---GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
Q I + + +S ++ GG+ Q+ ++ GV +++ATPGRL+D+L+
Sbjct: 298 RQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQK 357
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYL 299
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L
Sbjct: 358 KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 417
Query: 300 YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCD 358
P + +G + I Q V+ V E K +V LLE + +LIF + K D
Sbjct: 418 VKPVTINVGRAGAASLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVD 473
Query: 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 474 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 523
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 136/350 (38%), Positives = 196/350 (56%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
V +MS I VEG +P P+KSF+++ FP +++ + K G PTPIQ QG
Sbjct: 170 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQG 229
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 230 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 288
Query: 186 VQ---IQQESTKF---GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
Q I + + +S ++ GG+ Q+ ++ GV +++ATPGRL+D+L+
Sbjct: 289 RQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQK 348
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYL 299
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L
Sbjct: 349 KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 408
Query: 300 YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCD 358
P + +G + I Q V+ V E K +V LLE + +LIF + K D
Sbjct: 409 VKPVTINVGRAGAASLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVD 464
Query: 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 465 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 514
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 136/350 (38%), Positives = 196/350 (56%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
V +MS I VEG +P P+KSF+++ FP +++ + K G PTPIQ QG
Sbjct: 152 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQG 211
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 212 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 270
Query: 186 VQ---IQQESTKF---GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
Q I + + +S ++ GG+ Q+ ++ GV +++ATPGRL+D+L+
Sbjct: 271 RQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQK 330
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYL 299
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L
Sbjct: 331 KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
Query: 300 YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCD 358
P + +G + I Q V+ V E K +V LLE + +LIF + K D
Sbjct: 391 VKPVTINVGRAGAASLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVD 446
Query: 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 124/314 (39%), Positives = 189/314 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF +G + +++ I AG+ +PTP+Q + P L+GRDL+ A+TG+GKT + LP +
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 160 HV--NAQPFLAPGDGPI---VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGP 214
+ N P + GP VLVL PTRELA Q+ + + K S CI+GGV P
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMNP 121
Query: 215 QVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQI 274
QV+ + +GV++++A PGRL+D+ + +L V LVLDEADRMLDMGF +KK+L+++
Sbjct: 122 QVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARL 181
Query: 275 RPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKL 334
RQ L +SAT+ ++ LA + L+NP ++ + P+ I Q V ++ + K + L
Sbjct: 182 PAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVER-IEQRVFRLAANHKRSLL 240
Query: 335 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGK 394
L+ + ++L+F TK G +++ L G A++IHG+KSQ R L++FKAG
Sbjct: 241 AHLIT-VGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGD 299
Query: 395 SPIMTATDVAARGL 408
IM ATD+AARGL
Sbjct: 300 VRIMVATDIAARGL 313
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 135/338 (39%), Positives = 194/338 (57%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+ G DVP+P+ F D+ +++ + I AG+ PTP+Q P GRDL+ A+TG
Sbjct: 219 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 278
Query: 147 SGKTLAYLLP---AIVH-----VNAQPFLAPG---DGPIVLVLAPTRELAVQIQQESTKF 195
SGKT A+L+P AI+ V+ + G P LVL+PTREL++QI ES KF
Sbjct: 279 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 338
Query: 196 GASSKIKSTCIYGGVPK-GPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDE 254
+ I S +YGG Q+ L+ G I+IATPGRLID+++ + YLVLDE
Sbjct: 339 AYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDE 398
Query: 255 ADRMLDMGFEPQIKKILSQIR-PDRQ---TLYWSATWPKEVEHLARQYLYNPYKVIIGSP 310
ADRMLDMGFEPQI++I+ R P ++ T +SAT+PKE++ LA+ +L Y +
Sbjct: 399 ADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENYVFLAVGR 458
Query: 311 DLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWP 370
+ I Q + V E +K + L+ LL+ D S L+F++TK+G + L +
Sbjct: 459 VGSTSENIMQKIVWVEEDEKRSYLMDLLDATGDSSLTLVFVETKRGASDLAYYLNRQNYE 518
Query: 371 ALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
++IHGD Q ER+ L F+ G +PI+ AT VAARGL
Sbjct: 519 VVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGL 556
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 135/350 (38%), Positives = 195/350 (55%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
V +MS I VEG +P P+KSF+++ P +++ + K G PTPIQ QG
Sbjct: 152 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQG 211
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 212 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 270
Query: 186 VQ---IQQESTKF---GASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES 239
Q I + + +S ++ GG+ Q+ ++ GV +++ATPGRL+D+L+
Sbjct: 271 RQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQK 330
Query: 240 HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYL 299
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L
Sbjct: 331 KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
Query: 300 YNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCD 358
P + +G + I Q V+ V E K +V LLE + +LIF + K D
Sbjct: 391 VKPVTINVGRAGAASLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVD 446
Query: 359 QITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 447 AIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 496
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 140/351 (39%), Positives = 196/351 (55%)
Query: 70 VAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQG 129
V +MS I VEG +P P+KSF+++ P +++ + K G PTPIQ QG
Sbjct: 151 VLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQG 210
Query: 130 WPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELA 185
P L GRD+IGIA TGSGKTL + LP I+ Q PF + +GP L++ P+RELA
Sbjct: 211 IPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPF-SKREGPYGLIICPSRELA 269
Query: 186 VQ---IQQESTKF--GASSKIK--STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE 238
Q I + + SS + + CI GGV Q+ ++ GV I++ATPGRL+D+L+
Sbjct: 270 RQTHGILEYYCRLLQEDSSPLLHCALCI-GGVSLKEQMETMRHGVHIMVATPGRLMDLLQ 328
Query: 239 SHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQY 298
+L YL LDEADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+
Sbjct: 329 KKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSA 388
Query: 299 LYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGC 357
L P + +G + I Q V+ V E K +V LLE + +LIF K
Sbjct: 389 LVKPVTINVGRAGAASLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAKKKADV 444
Query: 358 DQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
D I L + G A++IHG K Q ER + F+ GK ++ ATDVA++GL
Sbjct: 445 DAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGL 495
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 109/164 (66%), Positives = 129/164 (78%)
Query: 170 GDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIAT 229
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+RDL++GVEI IAT
Sbjct: 3 GDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIAT 62
Query: 230 PGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPK 289
PGRLID LE TNLRR TYLVLDEADRMLDMGFEPQI+KI+ QIRPDRQTL WSATWPK
Sbjct: 63 PGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 122
Query: 290 EVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNK 333
EV LA +L + + IG+ +L ANH I Q VD+ + +K K
Sbjct: 123 EVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 166
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 125/314 (39%), Positives = 186/314 (59%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF +G + ++ I AG+ +PTP+Q + P L+GRDL+ A+TG+GKT + LP +
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 160 HV--NAQPFLAPGDGPI---VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGP 214
+ N P + GP VLVL PTRELA Q+ + K S CI+GGV P
Sbjct: 62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMNP 121
Query: 215 QVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQI 274
QV+ + +GV++++A PGRL+D+ + +L V LVLDEADRMLDMGF +KK+L+++
Sbjct: 122 QVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARL 181
Query: 275 RPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKL 334
RQ L +SAT+ K++ LA + L+NP ++ + P+ I Q V + S K L
Sbjct: 182 PAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVER-IEQRVFRLPASHKRALL 240
Query: 335 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGK 394
L+ ++L+F TK G +++ L G A++IHG+KSQ R L++FKAG+
Sbjct: 241 AHLIT-AGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGE 299
Query: 395 SPIMTATDVAARGL 408
I+ ATD+AARGL
Sbjct: 300 VRILVATDIAARGL 313
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 131/374 (35%), Positives = 207/374 (55%)
Query: 48 PRKLDLDGLTPFEKNF-YVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGF 106
P+K + P + Y E V+ + ITV GR VP+P+ F GF
Sbjct: 152 PQKAGSEPAAPGPAPYVYTEHAFVSHLREDQIENLRRQLGITVRGRGVPRPIVDFEHCGF 211
Query: 107 PDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPF 166
P+ + + + +G+ PTPIQ Q P+ L GRD++ A+TGSGKT A+LLP I+
Sbjct: 212 PEALNRNLKASGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKTAAFLLPVILRA----- 266
Query: 167 LAPGDGPIVLVLAPTRELAVQIQQESTKFGASSK-IKSTCIYGGVPKGPQVRDLQKGVEI 225
L+ P LVL PTRELA+QI++++ + + +++ + GG+P PQ L++ +++
Sbjct: 267 LSQSKSPSGLVLTPTRELAIQIERQAKELMSGLPCLRTALLVGGLPAPPQRHRLRQRIQV 326
Query: 226 VIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSA 285
+IATPGRL+D+++ + L + +V+DEAD ML MGF+ Q+ +L Q+ D QT+ SA
Sbjct: 327 IIATPGRLLDIIKQRSVELGSIKIVVVDEADTMLKMGFQQQVLDVLEQLPHDCQTVLASA 386
Query: 286 TWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDI-MDG 344
T P VE LA Q L +P + G +L ++RQ V V E K KL ++L D +
Sbjct: 387 TIPASVEQLACQLLRDPVAITAGERNLPCP-SVRQIVLWVEEPAKKKKLFEILNDKKLFK 445
Query: 345 SRILIFMDTKKGCDQITRQL-RMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV 403
+L+F+D K G D ++ + ++ G + S+H DK+Q ER +L G ++ +T V
Sbjct: 446 PPVLVFVDCKLGADLLSEAVQKITGLKSTSVHSDKTQMERKNILKGLLEGDYDVVVSTGV 505
Query: 404 AARGLGNCACVIIV 417
RGL ++V
Sbjct: 506 LGRGLDLVGVKLVV 519
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 121/311 (38%), Positives = 189/311 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F +G ++ +S+ G PTPIQ Q P L+G+D++ A+TG+GKT A+ LP I
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 160 HVNAQPFLAPGDGPIV--LVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
QP+ + + LVL PTRELA Q+ + +++K +YGG Q+
Sbjct: 67 RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L+ GV+I+IATPGRL+D + L +V LVLDEADRMLDMGF P ++++L ++ P
Sbjct: 127 HLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPL 186
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
RQTL++SAT+ +++ +A + + +P +V + +P ++Q V V + +K +L+
Sbjct: 187 RQTLFFSATFDSKIKAVAYRIMRDPIEVQV-TPSNSTAETVQQMVYPVDKKRK-RELLSY 244
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L + ++L+F T++G D + +L++DG A+SI+GDKSQ R L +FKAGK
Sbjct: 245 LIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRA 304
Query: 398 MTATDVAARGL 408
+ ATDVAARGL
Sbjct: 305 LIATDVAARGL 315
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 121/311 (38%), Positives = 189/311 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F +G ++ +S+ G PTPIQ Q P L+G+D++ A+TG+GKT A+ LP I
Sbjct: 7 TFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQ 66
Query: 160 HVNAQPFLAPGDGPIV--LVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
QP+ + + LVL PTRELA Q+ + +++K +YGG Q+
Sbjct: 67 RFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLN 126
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L+ GV+I+IATPGRL+D + L +V LVLDEADRMLDMGF P ++++L ++ P
Sbjct: 127 HLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPL 186
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
RQTL++SAT+ +++ +A + + +P +V + +P ++Q V V + +K +L+
Sbjct: 187 RQTLFFSATFDSKIKAVAYRIMRDPIEVQV-TPSNSTAETVQQMVYPVDKKRK-RELLSY 244
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L + ++L+F T++G D + +L++DG A+SI+GDKSQ R L +FKAGK
Sbjct: 245 LIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRA 304
Query: 398 MTATDVAARGL 408
+ ATDVAARGL
Sbjct: 305 LIATDVAARGL 315
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 124/309 (40%), Positives = 188/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F+++G VM+ I + GF E TPIQA+ P++L+ +D+IG A+TG+GKT A+ +P +
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
VN + LV+APTRELA+Q+ +E K GA +++ IYGG Q+R L
Sbjct: 63 KVNVK-----NSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRAL 117
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K +++ TPGR+ID + L V +VLDEAD ML+MGF I+ ILS + +RQ
Sbjct: 118 KKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQ 177
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P + +A +++ P V + + ++ + I+Q+ V E +K++ L +LL
Sbjct: 178 TLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVPN-IQQYYLEVHEKKKFDILTRLL- 235
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D++ L + G+ A IHGD SQA+R VL +FK G I+
Sbjct: 236 DIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILV 295
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 296 ATDVAARGL 304
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 416 (151.5 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 80/188 (42%), Positives = 121/188 (64%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I+ +G P P++++++ P +++ I + G+ +P+PIQ Q P++L GRD++GIAETG
Sbjct: 401 ISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETG 460
Query: 147 SGKTLAYLLPAIVHVNAQPFLAP---GDGPIVLVLAPTRELAVQIQQESTKFGASSKIKS 203
SGKT A+++P +++++ QP L DGP LV+APTREL QI++E+ F +
Sbjct: 461 SGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRV 520
Query: 204 TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGF 263
+ GG Q + KG EI+IATPGRL D LE L + Y+VLDEAD M+D+GF
Sbjct: 521 VSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGF 580
Query: 264 EPQIKKIL 271
EPQ+ +L
Sbjct: 581 EPQVTSVL 588
Score = 172 (65.6 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 49/132 (37%), Positives = 70/132 (53%)
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV-SESQKYNKLVK 336
R T+ +SAT P VE L+++YL P + IG K IRQ V V SE+ K L +
Sbjct: 616 RTTILFSATMPPLVEKLSKKYLRRPCTITIGEAG-KVVDRIRQTVIFVKSENDKKEHLTQ 674
Query: 337 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
L++D I+IF++ KK CD I L +H +SQ +R+ L FK K
Sbjct: 675 LIKD-GPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYE 733
Query: 397 IMTATDVAARGL 408
++ AT VA+RG+
Sbjct: 734 VLIATGVASRGI 745
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 121/309 (39%), Positives = 185/309 (59%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F+D +M+ I++ GF E TPIQAQ P+ L +D+IG A+TG+GKT A+ +P +
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
+N + +P IV+ APTRELA+Q+ +E K G + K IYGG G Q+R L
Sbjct: 64 KINPE---SPNIQAIVI--APTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRAL 118
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGRL+D + L V +V+DEAD ML+MGF I+ ILS + + Q
Sbjct: 119 KKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQ 178
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P ++ +A +++ P V + + ++ ++ I+Q V E +K++ L +LL
Sbjct: 179 TLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSN-IQQFYLEVQERKKFDTLTRLL- 236
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D++ L + G+ A IHGD +QA+R L +FK G ++
Sbjct: 237 DIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLV 296
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 297 ATDVAARGL 305
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 119/311 (38%), Positives = 185/311 (59%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F ++ ++++ ++ G+ EPTP+QA P AL+ DL+ A+TG+GKT A++LPA+
Sbjct: 2 TFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQ 61
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
+++ P PG GP VLVL PTRELA Q+ +GA +++S I GG+P Q+R L
Sbjct: 62 RLSSPP-QGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLL 120
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
V+ ++ATPGRL+D+L+ + +L R+ LVLDEADRMLDMGF + +I + RQ
Sbjct: 121 SAPVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATRQ 180
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL ++AT + LA + L P ++ I H I Q + + + N+L++ L
Sbjct: 181 TLLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEH-IEQRLHVADDLHHKNRLLRHL- 238
Query: 340 DIMDGS--RILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
I D S R +IF TK+ + + +L+ G A ++HGD Q R+ ++ K G+ +
Sbjct: 239 -ITDESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRL 297
Query: 398 MTATDVAARGL 408
+ ATDVAARGL
Sbjct: 298 LVATDVAARGL 308
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 122/309 (39%), Positives = 186/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F+D + + I + GF E TPIQAQ P+ L +D+IG A+TG+GKT A+ +P +
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
+N + +P IV+ APTRELA+Q+ +E K G + + IYGG G Q+R L
Sbjct: 64 KINPE---SPNIQAIVI--APTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRAL 118
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGRL+D + L+ V +VLDEAD ML+MGF I+ ILS + + Q
Sbjct: 119 KKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQ 178
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P ++ +A +++ NP V + + ++ ++ I+Q V E +K++ L +LL
Sbjct: 179 TLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSN-IQQFYLEVHERKKFDTLTRLL- 236
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D++T L + G+ A IHGD +QA+R L +FK G ++
Sbjct: 237 DIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLV 296
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 297 ATDVAARGL 305
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 127/341 (37%), Positives = 200/341 (58%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I+ +G +P+P++S+ + +++ + +AG+ +P+PIQ P+ L+ RD+IGIAETG
Sbjct: 301 ISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETG 360
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPG---DGPIVLVLAPTRELAVQIQQESTKFGASSKIKS 203
SGKT A++LP + +++ P ++ +GP +V+APTRELA QI++E+ KF +
Sbjct: 361 SGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRV 420
Query: 204 TCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGF 263
T I GG Q + +G EIVIATPGRLID LE L + Y+VLDEADRM+DMGF
Sbjct: 421 TSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 480
Query: 264 EPQIKKIL-----SQIRP-------DRQTLYWSATWPKEVEHLARQYLYNPY---KVIIG 308
EPQ+ +L S ++P D + +Y + + L Y V++
Sbjct: 481 EPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVT 540
Query: 309 SPDL-KANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMD 367
K I QHV ++ ES+K+ +L KLL+++ + + I +F++TKK CD I + L
Sbjct: 541 IGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEKTAI-VFVNTKKNCDSIAKNLDKA 599
Query: 368 GWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
G+ ++HG KSQ +R+ L F+A + ++ ATDV RG+
Sbjct: 600 GYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGI 640
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 116/309 (37%), Positives = 191/309 (61%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF +G + + +S+ G+ P+PIQAQ P L G+D++ A+TG+GKT + LP ++
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLP-LL 60
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
+ A+ A LVL PTRELA Q+ + +G ++S ++GGVP PQ+ L
Sbjct: 61 ELLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKL 120
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+ GV++++ATPGRL+D+++ + ++ LVLDEADRMLDMGF IKKIL+ + RQ
Sbjct: 121 RHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQ 180
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
L +SAT+ E+ LA+ + +P ++ + +P A ++Q + V ++QK L++L++
Sbjct: 181 NLMFSATFSDEIRELAKGLVNHPVEISV-TPRNAAATTVKQWICPVDKTQKSALLIQLIK 239
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
+ ++L+F TK G +++ + L A +IHG+KSQ R L++FK+G+ ++
Sbjct: 240 Q-ENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLV 298
Query: 400 ATDVAARGL 408
ATD+AARGL
Sbjct: 299 ATDIAARGL 307
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 129/339 (38%), Positives = 199/339 (58%)
Query: 74 SXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGF-PDYVMQEISKAGFFEPTPIQAQGWPM 132
S IT D K+F+++ PD +++ I F +PTPIQ++ P
Sbjct: 98 SSLSSSSSTTSSSITTIDPDAELKFKTFKELNLVPD-LLESIESMKFTKPTPIQSEAIPH 156
Query: 133 ALKGRDLIGIAETGSGKTLAYLLPAIVHV-NAQ-PFLAPGDGPIVLVLAPTRELAVQIQQ 190
AL+G+D+IG+A+TGSGKT A+ +P + + +AQ P+ A LVLAPTREL QI+
Sbjct: 157 ALEGKDIIGLAQTGSGKTAAFAIPILQSLWHAQQPYFA-------LVLAPTRELTFQIKD 209
Query: 191 ESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLE-SHNTNLRRVTY 249
G+S ++S+CI GG+ Q RDL + +++ATPGR++D LE + +L+ + Y
Sbjct: 210 TFDALGSSMGLRSSCIVGGMDMMDQARDLMRKPHVIVATPGRIMDHLEHTKGFSLKNLKY 269
Query: 250 LVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGS 309
LV+DEADR+LDM F P + KIL I R T +SAT ++E L R L+NP +V + S
Sbjct: 270 LVMDEADRLLDMDFGPALDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAVSS 329
Query: 310 PDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGW 369
A++ + Q + +V++ K L+ LL + M G I++F T + R+ G+
Sbjct: 330 KYQTADNLV-QSMMLVNDGYKNTILIHLLNEFM-GKSIIVFTRTVAHAQRTALLARILGF 387
Query: 370 PALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
A+ +HG SQ++R L++FK+ ++ I+ ATDVAARGL
Sbjct: 388 NAVPLHGQLSQSQRLGSLNKFKSNQANILVATDVAARGL 426
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 120/309 (38%), Positives = 186/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+FR++G D ++Q + GF E TPIQA+ P AL+G+D+IG A+TG+GKT A+ LP +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
V+ G +V+APTRELA+Q+ +E K G +++ IYGG Q+R L
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGR++D + L+ V +VLDEAD ML+MGF I+ IL+ + Q
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQ 177
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P + +A +++ P + + + ++ + I+Q V E +K++ L +LL
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN-IQQFYLEVQEKKKFDVLTRLL- 235
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D+++ L + G+ A IHGD +QA+R VL +FK G ++
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 296 ATDVAARGL 304
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 120/309 (38%), Positives = 186/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+FR++G D ++Q + GF E TPIQA+ P AL+G+D+IG A+TG+GKT A+ LP +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
V+ G +V+APTRELA+Q+ +E K G +++ IYGG Q+R L
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGR++D + L+ V +VLDEAD ML+MGF I+ IL+ + Q
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQ 177
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P + +A +++ P + + + ++ + I+Q V E +K++ L +LL
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN-IQQFYLEVQEKKKFDVLTRLL- 235
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D+++ L + G+ A IHGD +QA+R VL +FK G ++
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 296 ATDVAARGL 304
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 120/309 (38%), Positives = 186/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+FR++G D ++Q + GF E TPIQA+ P AL+G+D+IG A+TG+GKT A+ LP +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
V+ G +V+APTRELA+Q+ +E K G +++ IYGG Q+R L
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGR++D + L+ V +VLDEAD ML+MGF I+ IL+ + Q
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQ 177
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P + +A +++ P + + + ++ + I+Q V E +K++ L +LL
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN-IQQFYLEVQEKKKFDVLTRLL- 235
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D+++ L + G+ A IHGD +QA+R VL +FK G ++
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 296 ATDVAARGL 304
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 120/309 (38%), Positives = 186/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+FR++G D ++Q + GF E TPIQA+ P AL+G+D+IG A+TG+GKT A+ LP +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
V+ G +V+APTRELA+Q+ +E K G +++ IYGG Q+R L
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGR++D + L+ V +VLDEAD ML+MGF I+ IL+ + Q
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQ 177
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P + +A +++ P + + + ++ + I+Q V E +K++ L +LL
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN-IQQFYLEVQEKKKFDVLTRLL- 235
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D+++ L + G+ A IHGD +QA+R VL +FK G ++
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 296 ATDVAARGL 304
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 120/309 (38%), Positives = 186/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+FR++G D ++Q + GF E TPIQA+ P AL+G+D+IG A+TG+GKT A+ LP +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
V+ G +V+APTRELA+Q+ +E K G +++ IYGG Q+R L
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGR++D + L+ V +VLDEAD ML+MGF I+ IL+ + Q
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQ 177
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P + +A +++ P + + + ++ + I+Q V E +K++ L +LL
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN-IQQFYLEVQEKKKFDVLTRLL- 235
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D+++ L + G+ A IHGD +QA+R VL +FK G ++
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 296 ATDVAARGL 304
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 120/309 (38%), Positives = 186/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+FR++G D ++Q + GF E TPIQA+ P AL+G+D+IG A+TG+GKT A+ LP +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
V+ G +V+APTRELA+Q+ +E K G +++ IYGG Q+R L
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGR++D + L+ V +VLDEAD ML+MGF I+ IL+ + Q
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQ 177
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P + +A +++ P + + + ++ + I+Q V E +K++ L +LL
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN-IQQFYLEVQEKKKFDVLTRLL- 235
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D+++ L + G+ A IHGD +QA+R VL +FK G ++
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 296 ATDVAARGL 304
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 120/309 (38%), Positives = 186/309 (60%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+FR++G D ++Q + GF E TPIQA+ P AL+G+D+IG A+TG+GKT A+ LP +
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
V+ G +V+APTRELA+Q+ +E K G +++ IYGG Q+R L
Sbjct: 63 KVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRAL 117
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+K I++ TPGR++D + L+ V +VLDEAD ML+MGF I+ IL+ + Q
Sbjct: 118 KKHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQ 177
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT P + +A +++ P + + + ++ + I+Q V E +K++ L +LL
Sbjct: 178 TLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPN-IQQFYLEVQEKKKFDVLTRLL- 235
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
DI ++F TK+ D+++ L + G+ A IHGD +QA+R VL +FK G ++
Sbjct: 236 DIQSPELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLV 295
Query: 400 ATDVAARGL 408
ATDVAARGL
Sbjct: 296 ATDVAARGL 304
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 129/312 (41%), Positives = 183/312 (58%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F+ GF V I+ AG+ PTPIQAQ P + GRD++G+A+TG+GKT A+ LP I+H
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALP-ILH 61
Query: 161 VNAQPFLAPGD-GPI-VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
L G+ G + LV+APTRELA QI G ++++S +YGGV PQV+
Sbjct: 62 R-----LQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQK 116
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L+ G E+V+A PGRL+D + +L R+ LVLDEAD+M DMGF P I+++L + P R
Sbjct: 117 LKAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRR 176
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGS--PDLKANHAIRQHVDIVSESQKYNKLVK 336
QTL +SAT P ++ LA+ L +P V +G+ P + HA+ V + K L++
Sbjct: 177 QTLLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAVTVAHALYP----VEQHLKTPLLLE 232
Query: 337 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
LL D +LIF TK ++ QL G+ A S+ G+ SQ R L F+ G
Sbjct: 233 LLRHT-DTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQ 291
Query: 397 IMTATDVAARGL 408
I+ ATD+AARG+
Sbjct: 292 ILVATDIAARGI 303
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 112/313 (35%), Positives = 185/313 (59%)
Query: 97 PVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLP 156
P K F D+G + +++ + G+ P+PIQAQ P + GRD++ A+TG+GKT + LP
Sbjct: 5 PTK-FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLP 63
Query: 157 AIVHVNAQPFLAPGDGPI-VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQ 215
+ +++ + L+L PTRELA QI + +G + S ++GGV PQ
Sbjct: 64 LLQRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQ 123
Query: 216 VRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIR 275
+ L++GV++++ATPGRL+D+ ++ +LDEADRMLDMGF IKK+++ +
Sbjct: 124 IARLRQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALP 183
Query: 276 PDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLV 335
DRQ L +SAT+ E+ LA+ + NP ++ + + + A + Q + V + +K L
Sbjct: 184 KDRQNLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEK-VTQWLTAVDKKRKPAVLT 242
Query: 336 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKS 395
L+++ + ++L+F TK G +++T+ L +G A +IHG+KSQ R L+ FK G
Sbjct: 243 HLIKE-NNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSV 301
Query: 396 PIMTATDVAARGL 408
I+ ATD+AARG+
Sbjct: 302 KILVATDIAARGI 314
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 127/312 (40%), Positives = 177/312 (56%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF F VM + G+ EPTPIQAQ P L+G D+IG+A+TG+GKT AY LP I
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVI- 60
Query: 160 HVNAQPFLAPGDGPI-VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
Q L+ G + LVLAPTRELA QI + G ++I+ IYGGV Q+R
Sbjct: 61 ----QKMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRR 116
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L+ GV++V+A PGRL+D + ++ V L++DEADRM DMGF+P I+ IL +
Sbjct: 117 LRSGVDVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPH 176
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGS--PDLKANHAIRQHVDIVSESQKYNKLVK 336
QTL +SAT P EV L + NP + IG+ P +H++ V QK L++
Sbjct: 177 QTLLFSATMPPEVRKLTLETQTNPVTIQIGTQAPASSVSHSVYP----VKNHQKTPLLIE 232
Query: 337 LLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
+L+ S +LIF TK G + + ++ G+ S+ G+ SQ R V+ F+ G
Sbjct: 233 ILKTTETKS-VLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFK 291
Query: 397 IMTATDVAARGL 408
I+ ATD+AARGL
Sbjct: 292 ILVATDIAARGL 303
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 118/313 (37%), Positives = 184/313 (58%)
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
++ F+ +G +++ ++ GF PTPIQ + P+ L+G +L+G A TG+GKT AYLLP
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 158 IVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
+ + G VL++ PTRELA+Q+ E K G K+++ +YGG Q+R
Sbjct: 61 LQRIQR------GKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIR 114
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L++GVE+++ TPGR++D + + ++LDEAD MLDMGF I+ IL+ +
Sbjct: 115 GLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNR 174
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVI--IGSPDLKANHAIRQHVDIVSESQKYNKLV 335
+QTL +SAT P ++ + +++L YK + +G K AIRQ + E++K LV
Sbjct: 175 QQTLLFSATLPAPIKTIIKKFL-GGYKTVKLVGRE--KTVPAIRQVYYELPETEKIEGLV 231
Query: 336 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKS 395
+L + + ++F TKK D++ QL G+ A +HGD SQ ER + FKAGK+
Sbjct: 232 SILNSELP-IQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKT 290
Query: 396 PIMTATDVAARGL 408
++ ATDVAARGL
Sbjct: 291 ELLVATDVAARGL 303
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 118/308 (38%), Positives = 182/308 (59%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F +G +++ I + G+ P+PIQ Q P L G+D++ A+TG+GKT + LP I+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLP-ILE 61
Query: 161 VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQ 220
+ A+ + L+L PTRELA QIQ +G +KS ++GGV PQ++ +
Sbjct: 62 LLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMC 121
Query: 221 KGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQT 280
KG +I++ATPGRL+D+ + ++ LVLDEADRMLDMGF I KIL + RQ
Sbjct: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQN 181
Query: 281 LYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLED 340
L +SAT+ E+ LA+ + NP ++ + SP + Q + +K + LVKL+++
Sbjct: 182 LLFSATFSTEIRELAKGLVNNPVEISV-SPANSTARTVEQCIYPADVKKKPDMLVKLVKE 240
Query: 341 IMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTA 400
+ ++L+FM TK G +++ L G A +IHG+KSQ R L++FKAG+ I+ A
Sbjct: 241 -GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVA 299
Query: 401 TDVAARGL 408
TD+AARG+
Sbjct: 300 TDIAARGI 307
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 118/313 (37%), Positives = 184/313 (58%)
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
++ F+ +G +++ ++ GF PTPIQ + P+ L+G +L+G A TG+GKT AYLLP
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 158 IVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
+ + G VL++ PTRELA+Q+ E K G K+++ +YGG Q+R
Sbjct: 61 LQRIQR------GKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIR 114
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L++GVE+++ TPGR++D + + ++LDEAD MLDMGF I+ IL+ +
Sbjct: 115 GLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNR 174
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVI--IGSPDLKANHAIRQHVDIVSESQKYNKLV 335
+QTL +SAT P ++ + +++L YK + +G K AIRQ + E++K LV
Sbjct: 175 QQTLLFSATLPAPIKTIIKKFL-GGYKTVKLVGRE--KTVPAIRQVYYELPETEKIEGLV 231
Query: 336 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKS 395
+L + + ++F TKK D++ QL G+ A +HGD SQ ER + FKAGK+
Sbjct: 232 SILNSELP-IQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKT 290
Query: 396 PIMTATDVAARGL 408
++ ATDVAARGL
Sbjct: 291 ELLVATDVAARGL 303
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 118/308 (38%), Positives = 182/308 (59%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F +G +++ I + G+ P+PIQ Q P L G+D++ A+TG+GKT + LP I+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLP-ILE 61
Query: 161 VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQ 220
+ A+ + L+L PTRELA QIQ +G +KS ++GGV PQ++ +
Sbjct: 62 LLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMC 121
Query: 221 KGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQT 280
KG +I++ATPGRL+D+ + ++ LVLDEADRMLDMGF I KIL + RQ
Sbjct: 122 KGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQN 181
Query: 281 LYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLED 340
L +SAT+ E+ LA+ + NP ++ + SP + Q + +K + LVKL+++
Sbjct: 182 LLFSATFSTEIRELAKGLVNNPVEISV-SPANSTARTVEQCIYPADVKKKPDMLVKLVKE 240
Query: 341 IMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTA 400
+ ++L+FM TK G +++ L G A +IHG+KSQ R L++FKAG+ I+ A
Sbjct: 241 -GNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVA 299
Query: 401 TDVAARGL 408
TD+AARG+
Sbjct: 300 TDIAARGI 307
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 538 (194.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 127/334 (38%), Positives = 186/334 (55%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
IT +G +P P++S++D P ++++ I K G+ EPTPIQ Q P+ L+ RD+IG+AETG
Sbjct: 379 ITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETG 438
Query: 147 SGKTLAYLLPAIVHVNAQPFL---APGD-GPIVLVLAPTRELAVQIQQESTKFGASSKIK 202
SGKT A+L+P +V + P + D GP ++LAPTRELA QI++E+ KFG I+
Sbjct: 439 SGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 203 STCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMG 262
+ GG+ + Q L+ G EIVIATPGRLID+LE+ L R TY+VLDEADRM+DMG
Sbjct: 499 PVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMG 558
Query: 263 FEPQIKKILSQIRPDRQTLYWS-ATWPKEV--EHLARQYLYNPYKVIIGSPDLKAN---- 315
FEP ++KIL + Q A P+++ + ++ Y + +P +
Sbjct: 559 FEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTLPCLSTPPIPTRLLSL 618
Query: 316 -HAIRQHVDIVSESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSI 374
H S + L+ + SR L + + C T + A ++
Sbjct: 619 PSLSSAHPSSPPSSPSPSPLLLCASPSL--SRSLCCVLPRAHCSFFTSPF-FQQYNACTL 675
Query: 375 HGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
HG K Q +R++ LS KAG I+ ATDVA RG+
Sbjct: 676 HGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 709
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 130/311 (41%), Positives = 183/311 (58%)
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F+D+G D + + + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT A+ LP +
Sbjct: 50 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 109
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
NA L LVL PTRELA QI ++ G+S ++S I GG+ Q
Sbjct: 110 ---NA--LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 164
Query: 219 LQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L K IVIATPGRLID LE+ NLR + YLV+DEADR+L+M FE ++ KIL I D
Sbjct: 165 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 224
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
R+T +SAT K+V+ L R L NP K + S + ++Q+ + K LV +
Sbjct: 225 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSK-YQTVEKLQQYYLFIPSKFKDTYLVYI 283
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L ++ G+ +IF T + LR G+ A+ +HG SQ++R L++FKA I
Sbjct: 284 LNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 342
Query: 398 MTATDVAARGL 408
+ ATDVA+RGL
Sbjct: 343 LLATDVASRGL 353
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 129/311 (41%), Positives = 183/311 (58%)
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F+D+G D + + + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT A+ LP +
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
NA L LVL PTRELA QI ++ G+S ++S I GG+ Q
Sbjct: 84 ---NA--LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 138
Query: 219 LQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L K I+IATPGRLID LE+ NLR + YLV+DEADR+L+M FE ++ KIL I D
Sbjct: 139 LAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
R+T +SAT K+V+ L R L NP K + S + ++Q+ + K LV +
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSK-YQTVEKLQQYYIFIPSKFKDTYLVYI 257
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L ++ G+ +IF T + LR G+ A+ +HG SQ++R L++FKA I
Sbjct: 258 LNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 316
Query: 398 MTATDVAARGL 408
+ ATDVA+RGL
Sbjct: 317 LLATDVASRGL 327
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 132/336 (39%), Positives = 186/336 (55%)
Query: 87 ITVEGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
I VEG +P P+KSFR++ FP +++ + K G PTPIQ QG P L GRD+IGIA TG
Sbjct: 25 ILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTG 84
Query: 147 SGKTLAYLLPAIVHVNAQ----PFLAPGDGPIVLVLAPTRELAVQIQQESTKF------- 195
SGKTL + LP I+ Q PF +GP L++ P+ +A ++
Sbjct: 85 SGKTLVFTLPIIMFCLEQEKRLPF-CKREGPYGLIICPSVNVAKHTHHGIIEYYCKLLED 143
Query: 196 -GASSKIKSTCIYGGVPKGPQVRDLQKGVEIV-IATPGRLIDMLESHNTNLRRVTYLVLD 253
GA + CI GG+ +++ +E+V +ATPGRL+D+L +L YL LD
Sbjct: 144 EGAPQMRCALCI-GGM-------SVKEQMEVVKLATPGRLMDLLNKKMVSLDICRYLALD 195
Query: 254 EADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLK 313
EADRM+DMGFE I+ I S + RQTL +SAT PK++++ A+ L P + +G
Sbjct: 196 EADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAA 255
Query: 314 ANHAIRQHVDIVSESQKYNKLVKLLEDIMDGSR-ILIFMDTKKGCDQITRQLRMDGWPAL 372
+ I Q V+ V E K +V LLE + +LIF + K D I L + G A+
Sbjct: 256 SLDVI-QEVEYVKEEAK---MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAV 311
Query: 373 SIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGL 408
+IHG K Q ER + FK GK ++ ATDVA++GL
Sbjct: 312 AIHGGKDQEERTKAIEAFKEGKKDVLVATDVASKGL 347
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 129/323 (39%), Positives = 186/323 (57%)
Query: 89 VEGRDVP--KPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETG 146
+E +VP + +SF+D+G D + + + G+ PT IQ + P+AL+GRD+IG+AETG
Sbjct: 13 LEAEEVPVVEEARSFKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETG 72
Query: 147 SGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCI 206
SGKT A+ LP + Q L LVL PTRELA QI ++ G+S + S I
Sbjct: 73 SGKTGAFALPIL-----QALLDAPQRLFALVLTPTRELAFQISEQFEALGSSIGVHSAVI 127
Query: 207 YGGVPKGPQVRDLQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEP 265
GG+ Q L K I+IATPGRL+D LE+ NLR + +LV+DEADR+L+M FE
Sbjct: 128 VGGIDSMSQSLALAKKPHIIIATPGRLVDHLENTKGFNLRALKFLVMDEADRILNMDFET 187
Query: 266 QIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV 325
++ KIL I DR+T +SAT K+V+ L R L NP K + S + ++Q+ +
Sbjct: 188 EVDKILKVIPRDRKTFLFSATMTKQVQKLQRAALKNPVKCAVSSK-YQTVEKLQQYYIFI 246
Query: 326 SESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 385
K + LV +L ++ G+ +IF T + LR G+ A+ +HG SQ +R
Sbjct: 247 PSKFKDSYLVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQNKRLG 305
Query: 386 VLSEFKAGKSPIMTATDVAARGL 408
L++FKA I+ ATDVA+RGL
Sbjct: 306 SLNKFKAKARSILLATDVASRGL 328
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 510 (184.6 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 114/321 (35%), Positives = 184/321 (57%)
Query: 91 GRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKT 150
G +V +PV F+ FP + + + AG+ PTP+Q Q P+ L GRD+I A+TGSGKT
Sbjct: 162 GTEVCRPVIEFQHCRFPTVLERNLKAAGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKT 221
Query: 151 LAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGAS-SKIKSTCIYGG 209
+A+LLP ++ +P P L+L PTRELA+QI++++ + +++ + GG
Sbjct: 222 VAFLLPVVMRALQSESASPSC-PACLILTPTRELAIQIEEQAKELMRGLPNMRTALLVGG 280
Query: 210 VPKGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKK 269
+P PQ+ L+ ++IVI TPGRL+++L+ L V +V+DEAD ML MGF+ Q+
Sbjct: 281 MPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLKMGFQQQVLD 340
Query: 270 ILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQ 329
IL Q+ D QTL SAT P + LA + ++P + IG + + +RQ V V E
Sbjct: 341 ILEQVPEDHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKNQPCAN-VRQIVLWVEEPS 399
Query: 330 KYNKLVKLLEDI-MDGSRILIFMDTKKGCDQITRQL-RMDGWPALSIHGDKSQAERDWVL 387
K KL ++L D + +++F+D K G D + + ++ ++IH DK Q ER+ ++
Sbjct: 400 KKKKLFEILNDEKLYQPPVVVFVDCKLGADLLCEAVQKVMSLNTVAIHSDKMQWERNKIV 459
Query: 388 SEFKAGKSPIMTATDVAARGL 408
G+ ++ +T + RGL
Sbjct: 460 KGLLEGQFDVVISTGILGRGL 480
Score = 37 (18.1 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 90 EGRDVPKPVKSFR 102
E +++ +PVKSF+
Sbjct: 53 EQQEIEEPVKSFK 65
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 129/311 (41%), Positives = 182/311 (58%)
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F+D+G D + + + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT A+ LP +
Sbjct: 26 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 85
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
NA L LVL PTRELA QI ++ G+S ++ I GG+ Q
Sbjct: 86 ---NA--LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 140
Query: 219 LQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L K IVIATPGRLID LE+ NLR + YLV+DEADR+L+M FE ++ KIL I D
Sbjct: 141 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 200
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
R+T +SAT K+V+ L R L NP K + S + ++Q+ + K LV +
Sbjct: 201 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSK-YQTVEKLQQYYLFIPSKFKDTYLVYI 259
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L ++ G+ +IF T + LR G+ A+ +HG SQ++R L++FKA I
Sbjct: 260 LNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 318
Query: 398 MTATDVAARGL 408
+ ATDVA+RGL
Sbjct: 319 LLATDVASRGL 329
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 129/311 (41%), Positives = 182/311 (58%)
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F+D+G D + + + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT A+ LP +
Sbjct: 23 KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 82
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
NA L LVL PTRELA QI ++ G+S ++ I GG+ Q
Sbjct: 83 ---NA--LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 137
Query: 219 LQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L K IVIATPGRLID LE+ NLR + YLV+DEADR+L+M FE ++ KIL I D
Sbjct: 138 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 197
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
R+T +SAT K+V+ L R L NP K + S + ++Q+ + K LV +
Sbjct: 198 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSK-YQTVEKLQQYYLFIPSKFKDTYLVYI 256
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L ++ G+ +IF T + LR G+ A+ +HG SQ++R L++FKA I
Sbjct: 257 LNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 315
Query: 398 MTATDVAARGL 408
+ ATDVA+RGL
Sbjct: 316 LLATDVASRGL 326
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 129/311 (41%), Positives = 182/311 (58%)
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F+D+G D + + + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT A+ LP +
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
NA L LVL PTRELA QI ++ G+S ++ I GG+ Q
Sbjct: 84 ---NA--LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 138
Query: 219 LQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L K IVIATPGRLID LE+ NLR + YLV+DEADR+L+M FE ++ KIL I D
Sbjct: 139 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
R+T +SAT K+V+ L R L NP K + S + ++Q+ + K LV +
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSK-YQTVEKLQQYYLFIPSKFKDTYLVYI 257
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L ++ G+ +IF T + LR G+ A+ +HG SQ++R L++FKA I
Sbjct: 258 LNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 316
Query: 398 MTATDVAARGL 408
+ ATDVA+RGL
Sbjct: 317 LLATDVASRGL 327
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 129/311 (41%), Positives = 182/311 (58%)
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F+D+G D + + + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT A+ LP +
Sbjct: 24 KTFKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
NA L LVL PTRELA QI ++ G+S ++ I GG+ Q
Sbjct: 84 ---NA--LLETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLA 138
Query: 219 LQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L K IVIATPGRLID LE+ NLR + YLV+DEADR+L+M FE ++ KIL I D
Sbjct: 139 LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRD 198
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
R+T +SAT K+V+ L R L NP K + S + ++Q+ + K LV +
Sbjct: 199 RKTFLFSATMTKKVQKLQRAALKNPVKCAVSSK-YQTVEKLQQYYLFIPSKFKDTYLVYI 257
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L ++ G+ +IF T + LR G+ A+ +HG SQ++R L++FKA I
Sbjct: 258 LNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 316
Query: 398 MTATDVAARGL 408
+ ATDVA+RGL
Sbjct: 317 LLATDVASRGL 327
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 339 (124.4 bits), Expect = 8.5e-51, Sum P(2) = 8.5e-51
Identities = 80/181 (44%), Positives = 107/181 (59%)
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH--VNAQP 165
+ ++ I K + + TPIQ + + DLIG+A+TGSGKT YLLP I H +N P
Sbjct: 371 ELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPP 430
Query: 166 ---FLAPGDG-----------PIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVP 211
+ + PI L+LAPTRELAVQI ++ KF + IK +YGG
Sbjct: 431 KHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNN 490
Query: 212 KGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKIL 271
Q+ +L KG +I++ATPGRL D+LE L T+LVLDEADRMLDMGF PQI+ I+
Sbjct: 491 IKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIV 550
Query: 272 S 272
+
Sbjct: 551 N 551
Score = 228 (85.3 bits), Expect = 8.5e-51, Sum P(2) = 8.5e-51
Identities = 60/143 (41%), Positives = 84/143 (58%)
Query: 266 QIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV 325
+ KK + I RQT+ +SAT+ KE++ LA++YL +++G N I+Q++ V
Sbjct: 570 EYKKYCNDIIK-RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFV 627
Query: 326 SESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 385
E K N L+ LL + +G IL F++TK+ D I R L A+ IHGDKSQ ER+
Sbjct: 628 EEENKCNYLLNLLAENNNGLTIL-FVETKRKADIIERFLSNQKLNAVCIHGDKSQDERER 686
Query: 386 VLSEFKAGKSPIMTATDVAARGL 408
L FK G I+ ATDVAARGL
Sbjct: 687 ALKLFKRGIKNILVATDVAARGL 709
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 339 (124.4 bits), Expect = 8.5e-51, Sum P(2) = 8.5e-51
Identities = 80/181 (44%), Positives = 107/181 (59%)
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH--VNAQP 165
+ ++ I K + + TPIQ + + DLIG+A+TGSGKT YLLP I H +N P
Sbjct: 371 ELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPP 430
Query: 166 ---FLAPGDG-----------PIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVP 211
+ + PI L+LAPTRELAVQI ++ KF + IK +YGG
Sbjct: 431 KHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNN 490
Query: 212 KGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKIL 271
Q+ +L KG +I++ATPGRL D+LE L T+LVLDEADRMLDMGF PQI+ I+
Sbjct: 491 IKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIV 550
Query: 272 S 272
+
Sbjct: 551 N 551
Score = 228 (85.3 bits), Expect = 8.5e-51, Sum P(2) = 8.5e-51
Identities = 60/143 (41%), Positives = 84/143 (58%)
Query: 266 QIKKILSQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV 325
+ KK + I RQT+ +SAT+ KE++ LA++YL +++G N I+Q++ V
Sbjct: 570 EYKKYCNDIIK-RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFV 627
Query: 326 SESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 385
E K N L+ LL + +G IL F++TK+ D I R L A+ IHGDKSQ ER+
Sbjct: 628 EEENKCNYLLNLLAENNNGLTIL-FVETKRKADIIERFLSNQKLNAVCIHGDKSQDERER 686
Query: 386 VLSEFKAGKSPIMTATDVAARGL 408
L FK G I+ ATDVAARGL
Sbjct: 687 ALKLFKRGIKNILVATDVAARGL 709
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 119/319 (37%), Positives = 192/319 (60%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F +G ++ I++ G+ + T +Q Q P+AL G+D++ A+TG+GKT A+ LP +
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQ 62
Query: 161 VNAQPFLAPGDGPIV--LVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
+ A+P D P++ LV+ PTRELA+Q+ K+ +K+ +YGG PQ +
Sbjct: 63 LAAKP----ADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKG 118
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
+++GV+I++ATPGRL D++ N +L VT LV+DEADRMLD+GF I+K+ I P
Sbjct: 119 VEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVH 178
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QT+ +SAT+ V+ L+ + L P V + + A+ + Q V V + +K L +L+
Sbjct: 179 QTMLFSATYSDAVKQLSHKMLNQPQWVNVAE-NTTAS-TVEQLVYRVDKRRKAELLSELV 236
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
+ ++L+F TK+ + + ++L +DG A HGDK+Q R+ VL +FKAGK ++
Sbjct: 237 GR-NNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVL 295
Query: 399 TATDVAARGLGNCACVIIV 417
ATDVAARGL A +++
Sbjct: 296 VATDVAARGLDIQALPLVI 314
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 119/319 (37%), Positives = 192/319 (60%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F +G ++ I++ G+ + T +Q Q P+AL G+D++ A+TG+GKT A+ LP +
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQVIPLALVGKDIMACAQTGTGKTAAFALPVLEQ 62
Query: 161 VNAQPFLAPGDGPIV--LVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
+ A+P D P++ LV+ PTRELA+Q+ K+ +K+ +YGG PQ +
Sbjct: 63 LAAKP----ADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKG 118
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
+++GV+I++ATPGRL D++ N +L VT LV+DEADRMLD+GF I+K+ I P
Sbjct: 119 VEQGVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVH 178
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QT+ +SAT+ V+ L+ + L P V + + A+ + Q V V + +K L +L+
Sbjct: 179 QTMLFSATYSDAVKQLSHKMLNQPQWVNVAE-NTTAS-TVEQLVYRVDKRRKAELLSELV 236
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
+ ++L+F TK+ + + ++L +DG A HGDK+Q R+ VL +FKAGK ++
Sbjct: 237 GR-NNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVL 295
Query: 399 TATDVAARGLGNCACVIIV 417
ATDVAARGL A +++
Sbjct: 296 VATDVAARGLDIQALPLVI 314
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 441 (160.3 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 99/247 (40%), Positives = 150/247 (60%)
Query: 162 NAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQK 221
+A+ A G L+L PTRELA Q+ +F IKS +YGG Q + L++
Sbjct: 81 SAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVVYGGGKMASQTKMLKQ 140
Query: 222 GVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTL 281
G+++++ATPGRL++ L N +L +V +LVLDEADRMLDMGF I+K+L ++ QTL
Sbjct: 141 GLDVLVATPGRLLEHLALRNVDLSQVKFLVLDEADRMLDMGFLTDIEKLLLAVKHKHQTL 200
Query: 282 YWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDI 341
+SAT+ V+ LA Q L +P K I S + + I+Q V V+E +K L +L+ +
Sbjct: 201 MFSATFSDRVKSLANQLLKSP-KTISVSKENTTSGKIKQAVYWVTEERKRELLSELI-GV 258
Query: 342 MDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTAT 401
+ ++L+F TK+ + + ++L++DG A HGDK+Q R+ L +F GK ++ AT
Sbjct: 259 NNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVRVLVAT 318
Query: 402 DVAARGL 408
DVAARGL
Sbjct: 319 DVAARGL 325
Score = 100 (40.3 bits), Expect = 2.3e-50, Sum P(2) = 2.3e-50
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
S +G +++ + G+ TPIQ + P+ +G DL+ A+TG+GKT A+ LP +
Sbjct: 2 SVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPIL 60
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/302 (39%), Positives = 180/302 (59%)
Query: 110 VMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAP 169
+++ +S G+ E TPIQAQ P L G D+IG +TGSGKT A+ L + ++ + F
Sbjct: 12 LLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNKLDVKRFRIQ 71
Query: 170 GDGPIVLVLAPTRELAVQIQQE-STKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
LVL PTRELA Q+ QE T +K + GGVP GPQ+ L+ G I++
Sbjct: 72 -----TLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVG 126
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGR++D L+ + +L + LVLDEADRML+MGF+PQ+ I+ Q +RQTL +SAT+P
Sbjct: 127 TPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFP 186
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHV-DIVSESQKYNKLVKLLEDIMDGSRI 347
++++ +A+Q +YNP V++ + + I QH + + + L LL + S +
Sbjct: 187 EQIQSIAKQIMYNP--VMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEHKPESAV 244
Query: 348 LIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP-IMTATDVAAR 406
+F +TK+ ++ +L G+ L++HGD Q +RD L +F A KS ++ ATDVAAR
Sbjct: 245 -VFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQF-ANKSACVLVATDVAAR 302
Query: 407 GL 408
GL
Sbjct: 303 GL 304
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 119/302 (39%), Positives = 180/302 (59%)
Query: 110 VMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAP 169
+++ +S G+ E TPIQAQ P L G D+IG +TGSGKT A+ L + ++ + F
Sbjct: 12 LLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNKLDVKRFRIQ 71
Query: 170 GDGPIVLVLAPTRELAVQIQQE-STKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIA 228
LVL PTRELA Q+ QE T +K + GGVP GPQ+ L+ G I++
Sbjct: 72 -----TLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVG 126
Query: 229 TPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWSATWP 288
TPGR++D L+ + +L + LVLDEADRML+MGF+PQ+ I+ Q +RQTL +SAT+P
Sbjct: 127 TPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFSATFP 186
Query: 289 KEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHV-DIVSESQKYNKLVKLLEDIMDGSRI 347
++++ +A+Q +YNP V++ + + I QH + + + L LL + S +
Sbjct: 187 EQIQSIAKQIMYNP--VMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEHKPESAV 244
Query: 348 LIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP-IMTATDVAAR 406
+F +TK+ ++ +L G+ L++HGD Q +RD L +F A KS ++ ATDVAAR
Sbjct: 245 -VFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQF-ANKSACVLVATDVAAR 302
Query: 407 GL 408
GL
Sbjct: 303 GL 304
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 125/313 (39%), Positives = 182/313 (58%)
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F+++G D + + K GF PTPIQ + P+ L RD+IG+A+TGSGKT A+ LP I
Sbjct: 46 KTFKELGVIDELCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVI 105
Query: 159 VHV--NAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQV 216
+ N PF A +VLAPTRELA QI ++ G S ++S I GG+ Q
Sbjct: 106 QELWNNPSPFFA-------VVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQA 158
Query: 217 RDLQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIR 275
L K +++ TPGRL+D LE+ +L+ + YL++DEADR+LDM F P I KIL I
Sbjct: 159 VALSKKPHVLVCTPGRLMDHLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIP 218
Query: 276 PDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLV 335
+R+TL +SAT +VE L R L+ P +V + S + I++++ K LV
Sbjct: 219 HERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYL-FFPFKHKDTYLV 277
Query: 336 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKS 395
L+ ++ G+ I+IF T ++ LR G+ A+ +HG SQ+ R L++FK+G
Sbjct: 278 YLVNELA-GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGAR 336
Query: 396 PIMTATDVAARGL 408
+ ATDVAARGL
Sbjct: 337 STLVATDVAARGL 349
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 116/311 (37%), Positives = 175/311 (56%)
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
+ F+ + ++ ++ G+ +PTPIQ + P + G DL+GIA+TG+GKT A+ LP
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPI 60
Query: 158 IVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
I L+L PTRELA QI Q + +K+ +YGGV + QV
Sbjct: 61 INKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVD 120
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
++ G++I++ATPGRL+D++E+ + N + + VLDEAD MLDMGF ++ I+S++
Sbjct: 121 SIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKS 180
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
RQTL +SAT P E+E LA L +P K+ I + + + + Q V + +S K L +
Sbjct: 181 RQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTID-LVNQSVYHLDKSNKVPLLFNI 239
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L D ++LIF TK G D I + L A S+H K+QA R+ L FK +
Sbjct: 240 LTKA-DYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRV 298
Query: 398 MTATDVAARGL 408
+ ATDVAARG+
Sbjct: 299 LVATDVAARGI 309
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 121/311 (38%), Positives = 184/311 (59%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F D+ P+ VMQ ++ AGF + TPIQ + P++L G+D+ G A+TG+GKT A+L+
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 161 VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQ 220
+ P ++LAPTREL VQI++++ GA IYGGV Q L+
Sbjct: 63 LLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALK 122
Query: 221 KGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRP-D-R 278
+G ++V+ TPGRLID L+ +L+ + LV+DEADRM DMGF ++ IL ++ P D R
Sbjct: 123 EGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYDKR 182
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
Q L +SAT + V LA +++ P KV + +P+ + Q + V +K+ L+ LL
Sbjct: 183 QNLMFSATLNQRVMELAYEFMNVPEKVAV-TPEQMTAERVEQVLYHVGRKEKFPLLLGLL 241
Query: 339 EDIMDG-SRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
+G R +IF++TK+ + + +L + +P I GD Q +R +L +FK+GK PI
Sbjct: 242 RK--EGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPI 299
Query: 398 MTATDVAARGL 408
M ATDVA+RGL
Sbjct: 300 MIATDVASRGL 310
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 113/308 (36%), Positives = 174/308 (56%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F F +++ IS G+ + TPIQ Q P +G+D++ A+TG+GKT A+ LP +
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 161 VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQ 220
+ P VL+L PTRELA Q+ + + IYGGV Q + L+
Sbjct: 63 MVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 221 KGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQT 280
+G +I++ATPGRL++ L + N +L V +LVLDEADRMLDMGF I+KIL + RQ
Sbjct: 123 RGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQN 182
Query: 281 LYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLED 340
L +SAT+ V+ LA + + P + + A+ + Q V V + +K L +L+
Sbjct: 183 LLFSATFSSAVKKLANEMMIKPQVISADKQNTTAD-TVSQVVYPVEQRRKRELLSELIGK 241
Query: 341 IMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTA 400
+ ++L+F T+ D + ++L +DG P+ +HG+K+Q R L EF +GK ++ A
Sbjct: 242 -KNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVA 300
Query: 401 TDVAARGL 408
T+VAARGL
Sbjct: 301 TEVAARGL 308
>UNIPROTKB|Q9KKW0 [details] [associations]
symbol:VCA0990 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GenomeReviews:AE003853_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:IGAKENA ProtClustDB:CLSK869861
EMBL:AE004426 PIR:H82390 RefSeq:NP_233374.1
ProteinModelPortal:Q9KKW0 DNASU:2612329 GeneID:2612329
KEGG:vch:VCA0990 PATRIC:20086502 Uniprot:Q9KKW0
Length = 428
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 120/309 (38%), Positives = 181/309 (58%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF + ++Q + KA EP+ IQ P L G+D+ +A TGSGKTLAY LP +
Sbjct: 24 SFSSLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
+ P LVL PTRELA+Q+ + T G + + + C+ GGV K Q L
Sbjct: 83 RLKTSPEQQ------ALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNAL 136
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+ I++AT GRL D+ +S L RVT LVLDEADR+LDMGF PQ++ + SQ RQ
Sbjct: 137 AENPNILVATTGRLFDLTQS-GLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQ 195
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
T+ SAT+ +++ A+Q + P +V +P+ N A+++ + +V++ K LV LL+
Sbjct: 196 TVMCSATFSDDLKLKAQQLMRAPTQVS-ANPENSINQAVQETLYLVNKGSKTQALVALLK 254
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
++L+F+ K+ D +T++L G A +HGDKSQ+ER+ L+EFK G + ++
Sbjct: 255 Q-HQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLI 313
Query: 400 ATDVAARGL 408
ATD+ ARG+
Sbjct: 314 ATDLLARGI 322
>TIGR_CMR|VC_A0990 [details] [associations]
symbol:VC_A0990 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GenomeReviews:AE003853_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:IGAKENA ProtClustDB:CLSK869861
EMBL:AE004426 PIR:H82390 RefSeq:NP_233374.1
ProteinModelPortal:Q9KKW0 DNASU:2612329 GeneID:2612329
KEGG:vch:VCA0990 PATRIC:20086502 Uniprot:Q9KKW0
Length = 428
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 120/309 (38%), Positives = 181/309 (58%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF + ++Q + KA EP+ IQ P L G+D+ +A TGSGKTLAY LP +
Sbjct: 24 SFSSLALSADLIQALPKA-ITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGLPLLE 82
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
+ P LVL PTRELA+Q+ + T G + + + C+ GGV K Q L
Sbjct: 83 RLKTSPEQQ------ALVLVPTRELAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNAL 136
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
+ I++AT GRL D+ +S L RVT LVLDEADR+LDMGF PQ++ + SQ RQ
Sbjct: 137 AENPNILVATTGRLFDLTQS-GLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQ 195
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
T+ SAT+ +++ A+Q + P +V +P+ N A+++ + +V++ K LV LL+
Sbjct: 196 TVMCSATFSDDLKLKAQQLMRAPTQVS-ANPENSINQAVQETLYLVNKGSKTQALVALLK 254
Query: 340 DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMT 399
++L+F+ K+ D +T++L G A +HGDKSQ+ER+ L+EFK G + ++
Sbjct: 255 Q-HQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAALAEFKNGTTQVLI 313
Query: 400 ATDVAARGL 408
ATD+ ARG+
Sbjct: 314 ATDLLARGI 322
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 119/310 (38%), Positives = 182/310 (58%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F D+G +++ ++ G+ +P+PIQA+ P L GRD++G+A+TGSGKT A+ LP +
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSK-IKSTCIYGGVPKGPQVRD 218
N P L P +LVLAPTRELAVQ+ + T F + + +YGG Q+R
Sbjct: 67 --NLDPELK---APQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRA 121
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L++G +IV+ TPGRL+D L+ +L +++ LVLDEAD ML MGF ++ I++QI
Sbjct: 122 LRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGH 181
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QT +SAT P+ + + R+++ P +V I S + I Q V +K LV+ L
Sbjct: 182 QTALFSATMPEAIRRITRRFMKEPQEVRIQS-SVTTRPDISQSYWTVWGMRKNEALVRFL 240
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
E D +IF+ TK ++ L +G+ + +++GD +QA R+ L K G+ I+
Sbjct: 241 E-AEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL 299
Query: 399 TATDVAARGL 408
ATDVAARGL
Sbjct: 300 IATDVAARGL 309
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 124/366 (33%), Positives = 186/366 (50%)
Query: 49 RKLDLDGLTPF-EKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFP 107
R++D + P ++ FYV P ++ + +G VP PV +F G P
Sbjct: 60 RRVDSARVFPATDECFYVRDPG-SSSHDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLP 118
Query: 108 DYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFL 167
++ + AG+ PTPIQ Q P AL G+ L+ A+TGSGKT ++L+P I
Sbjct: 119 PKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSE 178
Query: 168 APGD---GPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVE 224
P D P+ +VLAPTREL VQ++ ++ G K+ + GG P Q+ +Q+GVE
Sbjct: 179 HPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVE 238
Query: 225 IVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQTLYWS 284
++I TPGR++D+L H L + VLDE D ML GF Q+ +I Q Q L +S
Sbjct: 239 LIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFS 297
Query: 285 ATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLEDIMDG 344
AT +EVE + V IG+P+ K N A+ Q V QK KL +L
Sbjct: 298 ATISREVEKVGGSLAKEIILVSIGNPN-KPNKAVNQLAIWVDAKQKKQKLFDILRSQNHF 356
Query: 345 SR-ILIFMDTKKGCDQITRQLRM-DGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATD 402
++++ ++ G D + + + G ALSIHG+K ER V+ F G+ P++ +T
Sbjct: 357 KPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTG 416
Query: 403 VAARGL 408
V RG+
Sbjct: 417 VLGRGV 422
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 119/310 (38%), Positives = 173/310 (55%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF + ++ +++ G+ +PTPIQ + P L +D++ A+TG+GKT A+ LP +
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 160 HVNAQPFLAPGDGPI-VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
+ A I LVL PTRELA+Q+QQ K+ + I+ YGGV Q
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
G++++IATPGRL+D L NL ++ LV DEADRMLDMGF +I+ +L Q+ R
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QTL +SAT + ++ L +P ++ + P+ A I Q V + +K + V L
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQ-IEQRVYAIDSDRK-TEFVSHL 239
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
+ ++LIF TK+G D++T QL G S HGD SQ R+ VL EFK G ++
Sbjct: 240 VRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVL 299
Query: 399 TATDVAARGL 408
ATDVAARGL
Sbjct: 300 VATDVAARGL 309
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 119/310 (38%), Positives = 173/310 (55%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF + ++ +++ G+ +PTPIQ + P L +D++ A+TG+GKT A+ LP +
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 160 HVNAQPFLAPGDGPI-VLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
+ A I LVL PTRELA+Q+QQ K+ + I+ YGGV Q
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
G++++IATPGRL+D L NL ++ LV DEADRMLDMGF +I+ +L Q+ R
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QTL +SAT + ++ L +P ++ + P+ A I Q V + +K + V L
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQ-IEQRVYAIDSDRK-TEFVSHL 239
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
+ ++LIF TK+G D++T QL G S HGD SQ R+ VL EFK G ++
Sbjct: 240 VRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVL 299
Query: 399 TATDVAARGL 408
ATDVAARGL
Sbjct: 300 VATDVAARGL 309
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 115/311 (36%), Positives = 186/311 (59%)
Query: 103 DVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI---V 159
++G +++ +S G + PIQ A++GRD+IG A TG+GKTLA+ +P I +
Sbjct: 108 ELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 167
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
NA+ G P+ LVLAPTRELA Q+++E + S + + C+YGG P G Q+R L
Sbjct: 168 KYNAKH--GRGRNPLCLVLAPTRELARQVEKEFRESAPS--LDTICLYGGTPIGQQMRQL 223
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
GV++ + TPGR+ID+++ NL V ++VLDEAD+ML +GF ++ IL ++ RQ
Sbjct: 224 DYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQ 283
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKV-IIGSPDLKANHAIRQHVDIVSESQKYNKLV-KL 337
++ +SAT P + L ++YL NP V ++G D K I + I+++S ++ L
Sbjct: 284 SMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTY-SIIADSYGRASIIGPL 342
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
+ + G + ++F TK+ D+++ L + ++HGD SQ++R+ L+ F+ G I
Sbjct: 343 VTEHAKGGKCIVFTQTKRDADRLSYALARS-FKCEALHGDISQSQRERTLAGFRDGHFNI 401
Query: 398 MTATDVAARGL 408
+ ATDVAARGL
Sbjct: 402 LVATDVAARGL 412
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 124/319 (38%), Positives = 184/319 (57%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
SF+++G + + + + G+ +PT IQ + P+AL+GRD+IG+AETGSGKT A+ +P +
Sbjct: 80 SFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVL- 138
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
Q LA LVL PTRELA QI ++ G+S +K+ I GG+ Q L
Sbjct: 139 ----QSLLACAQRLHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALVL 194
Query: 220 QKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
K +VIATPGRLID +E+ NLR + YLV+DEADR+L+M FE ++ KIL I DR
Sbjct: 195 AKKPHVVIATPGRLIDHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPRDR 254
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
+T +SAT K+V+ L R L +P K + S + ++Q + K LV +L
Sbjct: 255 RTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVDK-LQQFYIFIPSKYKDCYLVSIL 313
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
++ G+ ++F T ++ LR G A+ +HG SQ +R L++FK+ ++
Sbjct: 314 NELA-GNSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVL 372
Query: 399 TATDVAARGLG--NCACVI 415
ATDVA+RGL + CVI
Sbjct: 373 LATDVASRGLDIPHVDCVI 391
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 511 (184.9 bits), Expect = 8.6e-49, P = 8.6e-49
Identities = 116/311 (37%), Positives = 180/311 (57%)
Query: 104 VGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNA 163
+ P + + + K G PIQ AL+GRD+I A+TG+GKTLA+ +P I +
Sbjct: 107 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 166
Query: 164 QP-----FLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
+ F G P LVLAPTRELA Q+++E + ++ + + C+YGGV Q
Sbjct: 167 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKE--SAPYLSTVCVYGGVSYTIQQSA 224
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L +GV++V+ TPGR+ID++E + L V YLVLDEAD+ML +GFE ++ IL + R
Sbjct: 225 LTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKR 284
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKV-IIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
Q++ +SAT P V+ LAR+YL NP + ++G D K I+ + + + K L L
Sbjct: 285 QSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDL 344
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
+ G + ++F TK+ D+++ L + ++HGD SQ +R+ L+ F+ GK +
Sbjct: 345 ITVYAKGGKTIVFTQTKRDADEVSLALS-NSIATEALHGDISQHQRERTLNAFRQGKFTV 403
Query: 398 MTATDVAARGL 408
+ ATDVA+RGL
Sbjct: 404 LVATDVASRGL 414
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 116/315 (36%), Positives = 182/315 (57%)
Query: 95 PKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYL 154
P+ V +F +G P+ ++ + GF T IQA P L G+D++G A+TG+GKT A+
Sbjct: 12 PEAV-AFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFG 70
Query: 155 LPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSK-IKSTCIYGGVPKG 213
LPA+ ++ P ++VLAPTRELA+Q+ + FG K ++ +YGG G
Sbjct: 71 LPALAKIDTSI-----KKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYG 125
Query: 214 PQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQ 273
PQ + L++G ++V+ TPGRL+D L + L + VLDEAD ML+MGF I+ IL
Sbjct: 126 PQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDH 185
Query: 274 IRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNK 333
I Q +SAT P + +A ++L +P + + + KA I Q+ VS K
Sbjct: 186 IPKTAQMCLFSATMPPAIRKIANRFLKDPEHIKVAAVK-KAKANITQYAWKVSGITKMTA 244
Query: 334 LVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAG 393
L ++ E +++ ++IF+ T+ I +L G+PAL+++GD +QA+R+ + + K+G
Sbjct: 245 LERIAE-VVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSG 303
Query: 394 KSPIMTATDVAARGL 408
KS I+ ATDV ARGL
Sbjct: 304 KSSILVATDVVARGL 318
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 123/332 (37%), Positives = 192/332 (57%)
Query: 90 EGRDVPKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGK 149
E + + +SF ++ ++Q + +PTPIQ++ P AL+G D+IG+A+TGSGK
Sbjct: 72 ENTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGK 131
Query: 150 TLAYLLPAIVHV--NAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIY 207
T A+ +P + + + +P+ A +LAPTRELA QI++ G+ ++STCI
Sbjct: 132 TAAFAIPILNRLWHDQEPYYA-------CILAPTRELAQQIKETFDSLGSLMGVRSTCIV 184
Query: 208 GGVPKGPQVRDLQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQ 266
GG+ Q RDL + I+IATPGRL+D LE+ +LR++ +LV+DEADR+LDM F P
Sbjct: 185 GGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPV 244
Query: 267 IKKILSQIRPDRQTLY-WSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIV 325
+ +IL I +T Y +SAT +++ L R L NP K + S + + Q + +V
Sbjct: 245 LDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAV-SNKYQTVDTLVQTLMVV 303
Query: 326 SESQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDW 385
K L+ LL + + G ++IF TK ++++ + + A ++HGD +Q +R
Sbjct: 304 PGGLKNTYLIYLLNEFI-GKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMG 362
Query: 386 VLSEFKAGKSPIMTATDVAARGLGNCACVIIV 417
L FKAGK I+ ATDVAARGL + I+V
Sbjct: 363 SLDLFKAGKRSILVATDVAARGLDIPSVDIVV 394
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 124/315 (39%), Positives = 174/315 (55%)
Query: 95 PKPVKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYL 154
P P KSF+++G D + + G+ PTPIQ+Q P+AL+GRD+IG+AETGSGKT A+
Sbjct: 42 PAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFA 101
Query: 155 LPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGP 214
LP + + P G LVLAPTRELA QI Q G++ ++ I GG+
Sbjct: 102 LPMLQALMEAPQTLFG-----LVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVA 156
Query: 215 QVRDLQKGVEIVIATPGRLIDMLES-HNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQ 273
Q L K I++ATPGRL+D LE+ +LR + YL +DEADR+LDM F + KI+
Sbjct: 157 QSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRI 216
Query: 274 IRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNK 333
+ R T +SAT +VE L R L NP +V + S + ++ + K
Sbjct: 217 LPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSK-YQTVSTLQSSYICIPHKHKNLY 275
Query: 334 LVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAG 393
LV LL + G +IF T ++ LR G+ A+ +HG SQ+ R L +F++
Sbjct: 276 LVYLLNEFA-GQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSR 334
Query: 394 KSPIMTATDVAARGL 408
I+ ATDVAARGL
Sbjct: 335 SRDILVATDVAARGL 349
>UNIPROTKB|J3QRQ7 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000577922 Uniprot:J3QRQ7
Length = 212
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 96/169 (56%), Positives = 120/169 (71%)
Query: 49 RKLDLDGLTPFEKNFYVESPSVAAMSXXXXXXXXXXXXITVEGRDVPKPVKSFRDVGFPD 108
+K +LD L FEKNFY E P +A + ITV G + PKPV +F + FP
Sbjct: 44 KKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPA 103
Query: 109 YVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLA 168
VM I++ F EPT IQAQGWP+AL G D++G+A+TGSGKTL+YLLPAIVH+N QPFL
Sbjct: 104 NVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLE 163
Query: 169 PGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
GDGPI LVLAPTRELA Q+QQ + ++ + ++KSTCIYGG PKGPQ+R
Sbjct: 164 RGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIR 212
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 114/311 (36%), Positives = 184/311 (59%)
Query: 103 DVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI---V 159
D+G +++ + G + PIQ A++GRD+IG A TG+GKTLA+ +P I +
Sbjct: 120 DLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII 179
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
NA+ G P LVLAPTRELA Q+++E + S + + C+YGG P G Q+R+L
Sbjct: 180 KFNAKH--GRGKNPQCLVLAPTRELARQVEKEFRESAPS--LDTICLYGGTPIGQQMREL 235
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
G+++ + TPGR+ID+++ NL V ++VLDEAD+ML +GF ++ IL ++ RQ
Sbjct: 236 NYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQ 295
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKV-IIGSPDLKANHAIRQHVDIVSESQKYNKLV-KL 337
++ +SAT P + L ++YL NP + ++G D K I + I ++S ++ L
Sbjct: 296 SMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMY-SIAADSYGRASIIGPL 354
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
+++ G + ++F TK+ D++ L + ++HGD SQA+R+ L+ F+ G I
Sbjct: 355 VKEHGKGGKCIVFTQTKRDADRLAFGLAKS-YKCEALHGDISQAQRERTLAGFRDGNFSI 413
Query: 398 MTATDVAARGL 408
+ ATDVAARGL
Sbjct: 414 LVATDVAARGL 424
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 112/312 (35%), Positives = 179/312 (57%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F D G + +++ ++++G+ PTPIQ + P L G D+ G+A+TG+GKT A++LP I
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQ 64
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRDL 219
++ A P L+L PTRELA Q+ + K+G K+ + GGV Q L
Sbjct: 65 RLSTGR--ARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLL 122
Query: 220 QKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDRQ 279
Q+GV+++IATPGRL+D + + V L++DEADRMLDMGF P I+KI +++ +RQ
Sbjct: 123 QRGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQ 182
Query: 280 TLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLLE 339
TL +SAT+P +++ LA+ + +P K+ + P A + V + + K + L
Sbjct: 183 TLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTA--LR 240
Query: 340 DIMDGSRI---LIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSP 396
+++ + + ++F + K D + L G A IHGD Q+ R L F+ GK
Sbjct: 241 RVIEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLK 300
Query: 397 IMTATDVAARGL 408
++ A+DVAARGL
Sbjct: 301 LLVASDVAARGL 312
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 114/314 (36%), Positives = 180/314 (57%)
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
V SF ++G + +++ G+ PTP+QA P L GRD++ A TGSGKT A+ LP
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67
Query: 158 IVHVNAQPFLAPGDGPI-VLVLAPTRELAVQIQQESTKFGA--SSKIKSTCIYGGVPKGP 214
+ ++ G + LVL PTRELA Q+ + + + ++K +GGV
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 215 QVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQI 274
Q++ L+ G ++++ATPGRL+D+L S+ L +V+ VLDEADRML +GF +++++L+ +
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAAL 187
Query: 275 RPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKL 334
+QTL +SAT+P+EV L + L+ P + + S + I Q V V+ QK L
Sbjct: 188 PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQS---EQESTIEQRVITVNREQKTALL 244
Query: 335 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGK 394
L++ S+ LIF+ K C+ + ++L G A HGDK+Q R VL FK G+
Sbjct: 245 AHLIKQ-HQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGE 303
Query: 395 SPIMTATDVAARGL 408
++ ATD+AARG+
Sbjct: 304 ISVLIATDIAARGI 317
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 114/314 (36%), Positives = 180/314 (57%)
Query: 98 VKSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPA 157
V SF ++G + +++ G+ PTP+QA P L GRD++ A TGSGKT A+ LP
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67
Query: 158 IVHVNAQPFLAPGDGPI-VLVLAPTRELAVQIQQESTKFGA--SSKIKSTCIYGGVPKGP 214
+ ++ G + LVL PTRELA Q+ + + + ++K +GGV
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 215 QVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQI 274
Q++ L+ G ++++ATPGRL+D+L S+ L +V+ VLDEADRML +GF +++++L+ +
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAAL 187
Query: 275 RPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKL 334
+QTL +SAT+P+EV L + L+ P + + S + I Q V V+ QK L
Sbjct: 188 PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQS---EQESTIEQRVITVNREQKTALL 244
Query: 335 VKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGK 394
L++ S+ LIF+ K C+ + ++L G A HGDK+Q R VL FK G+
Sbjct: 245 AHLIKQ-HQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGE 303
Query: 395 SPIMTATDVAARGL 408
++ ATD+AARG+
Sbjct: 304 ISVLIATDIAARGI 317
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 116/310 (37%), Positives = 179/310 (57%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F +++ I+++ + EPT IQ Q P+ L D++ A+TG+GKT A+ LP +
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 160 H-VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
++ QP P LVL PTRELA Q+ + +G + + YGGV Q+ +
Sbjct: 66 QLISVQP-CKPELR--ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISE 122
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L+ GV+I+IATPGRL+D+L + + +L + LV DEADRMLDMGF+ +I +I + +
Sbjct: 123 LKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTK 182
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QTL +SAT+ ++ +++ L P V I + KA + Q V V +K +L L
Sbjct: 183 QTLLFSATFADDIYKMSKNILVEPKMVEIDEKN-KAADDVEQLVYGVDADRK-RELTSFL 240
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
+ ++L+F TK+ D + +++ DG +L+IHGDKSQ R+ L EFK GK +
Sbjct: 241 IGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRAL 300
Query: 399 TATDVAARGL 408
ATDVAARG+
Sbjct: 301 IATDVAARGI 310
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 116/310 (37%), Positives = 179/310 (57%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F +++ I+++ + EPT IQ Q P+ L D++ A+TG+GKT A+ LP +
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 160 H-VNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVRD 218
++ QP P LVL PTRELA Q+ + +G + + YGGV Q+ +
Sbjct: 66 QLISVQP-CKPELR--ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISE 122
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L+ GV+I+IATPGRL+D+L + + +L + LV DEADRMLDMGF+ +I +I + +
Sbjct: 123 LKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTK 182
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
QTL +SAT+ ++ +++ L P V I + KA + Q V V +K +L L
Sbjct: 183 QTLLFSATFADDIYKMSKNILVEPKMVEIDEKN-KAADDVEQLVYGVDADRK-RELTSFL 240
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
+ ++L+F TK+ D + +++ DG +L+IHGDKSQ R+ L EFK GK +
Sbjct: 241 IGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRAL 300
Query: 399 TATDVAARGL 408
ATDVAARG+
Sbjct: 301 IATDVAARGI 310
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 120/311 (38%), Positives = 174/311 (55%)
Query: 99 KSFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAI 158
K+F + +++ ++ G+ E TPIQA P+ L G+D+I A+TGSGKT A+ + +
Sbjct: 4 KAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLL 63
Query: 159 VHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGA-SSKIKSTCIYGGVPKGPQVR 217
++A F LVL PTRELA Q+ +E + + IK I GGVP GPQ+
Sbjct: 64 SRLDALSFRVQA-----LVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLG 118
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPD 277
L+ G +VI TPGRL+D L + +L + LVLDEADRMLDMGF+ I +++ P
Sbjct: 119 SLEHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPK 178
Query: 278 RQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKL 337
RQTL +SAT+P + ++ P +V + ++ AI Q V Q+ + ++
Sbjct: 179 RQTLLFSATYPDSIAAMSAGVQREPVEVSVD--EVHGEGAIEQVFYEVDSGQRIEAVERI 236
Query: 338 LEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPI 397
L S LIF +TK C ++ L + G+ AL+IHGD Q ERD VL F + +
Sbjct: 237 LGHYRPESA-LIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASV 295
Query: 398 MTATDVAARGL 408
+ ATDVAARGL
Sbjct: 296 LVATDVAARGL 306
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 110/310 (35%), Positives = 184/310 (59%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F D+ V++ I G+ PT IQA P + G D++G+A+TG+GKT A+ +P +
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 160 HVNAQPFLAPGDGPIVLVLAPTRELAVQIQQESTKFGAS-SKIKSTCIYGGVPKGPQVRD 218
++ + P LVL PTRELA+Q+ + ++GA S++ IYGG Q+
Sbjct: 74 KIDITSKV-----PQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAG 128
Query: 219 LQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQIRPDR 278
L++G ++V+ TPGR+ID LE +L RV +LVLDEAD ML MGF +++ILS+ +
Sbjct: 129 LRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYK 188
Query: 279 QTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLVKLL 338
Q +SAT P + L+ +YL++P++V + A + + ++ + ++K + L ++L
Sbjct: 189 QVALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQV---ARKMDALTRVL 245
Query: 339 EDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIM 398
E + +++F+ TK+ ++I +LR G+ A +I GD QA+R+ ++ + G I+
Sbjct: 246 E-VEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDIL 304
Query: 399 TATDVAARGL 408
ATDVAARGL
Sbjct: 305 VATDVAARGL 314
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 118/317 (37%), Positives = 182/317 (57%)
Query: 100 SFRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIV 159
+F ++G ++ +++ + +PTPIQA+ P GRDLI A TGSGKT + LP +
Sbjct: 9 TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQ 68
Query: 160 HVNAQPFLAPGD----GPIV--LVLAPTRELAVQIQQESTKFGA--SSKIKSTCIYGGVP 211
+ ++ G G V LVL PTRELA Q+ + + +IK+ ++GGV
Sbjct: 69 KLRED--ISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVS 126
Query: 212 KGPQVRDLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKIL 271
Q+ L+ GV+I++ATPGRL+D++ S+ L +V LVLDEADRML +GF ++ +L
Sbjct: 127 VNIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALL 186
Query: 272 SQIRPDRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKY 331
+ +QTL +SAT+P++V L ++ L NP ++ + S D + Q V V++ +K
Sbjct: 187 ALTPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADAST---LVQRVFTVNKGEKT 243
Query: 332 NKLVKLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFK 391
L L++ + LIF++ K C+ + +L G A HGDK Q+ER VL FK
Sbjct: 244 AVLAHLIQQ-EQWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFK 302
Query: 392 AGKSPIMTATDVAARGL 408
AG ++ ATD+AARGL
Sbjct: 303 AGDIEVLIATDIAARGL 319
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 120/313 (38%), Positives = 173/313 (55%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F D G V+ + K GF TPIQA P+ L G+D+ G A+TG+GKTLA+L H
Sbjct: 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
Query: 161 VNAQPFLAPGDG---PIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
+ P A G P +++APTRELA+QI ++ AS+ +K+ YGG Q+
Sbjct: 71 LLTTP-AAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLA 129
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQI-RP 276
LQ GV+I+I T GR+ID + NL + +VLDEADRM D+GF I+ + ++ P
Sbjct: 130 KLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEP 189
Query: 277 -DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLV 335
DR + +SAT V+ LA +++ NP V++ P+ K H I++ + S K L
Sbjct: 190 KDRLNMLFSATLSYRVQELAFEHMNNPEHVVV-EPEQKTGHRIQEELFYPSNEHKMALLQ 248
Query: 336 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKS 395
L+E+ R +IF +TK C+QI L D + GD Q +R+ +L +F G
Sbjct: 249 TLIEEEWP-DRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDV 307
Query: 396 PIMTATDVAARGL 408
I+ ATDVAARGL
Sbjct: 308 DILVATDVAARGL 320
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 120/313 (38%), Positives = 173/313 (55%)
Query: 101 FRDVGFPDYVMQEISKAGFFEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVH 160
F D G V+ + K GF TPIQA P+ L G+D+ G A+TG+GKTLA+L H
Sbjct: 11 FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
Query: 161 VNAQPFLAPGDG---PIVLVLAPTRELAVQIQQESTKFGASSKIKSTCIYGGVPKGPQVR 217
+ P A G P +++APTRELA+QI ++ AS+ +K+ YGG Q+
Sbjct: 71 LLTTP-AAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLA 129
Query: 218 DLQKGVEIVIATPGRLIDMLESHNTNLRRVTYLVLDEADRMLDMGFEPQIKKILSQI-RP 276
LQ GV+I+I T GR+ID + NL + +VLDEADRM D+GF I+ + ++ P
Sbjct: 130 KLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEP 189
Query: 277 -DRQTLYWSATWPKEVEHLARQYLYNPYKVIIGSPDLKANHAIRQHVDIVSESQKYNKLV 335
DR + +SAT V+ LA +++ NP V++ P+ K H I++ + S K L
Sbjct: 190 KDRLNMLFSATLSYRVQELAFEHMNNPEHVVV-EPEQKTGHRIQEELFYPSNEHKMALLQ 248
Query: 336 KLLEDIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKS 395
L+E+ R +IF +TK C+QI L D + GD Q +R+ +L +F G
Sbjct: 249 TLIEEEWP-DRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDV 307
Query: 396 PIMTATDVAARGL 408
I+ ATDVAARGL
Sbjct: 308 DILVATDVAARGL 320
WARNING: HSPs involving 664 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 433 384 0.00091 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 914
No. of states in DFA: 617 (66 KB)
Total size of DFA: 238 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.70u 0.14s 31.84t Elapsed: 00:00:01
Total cpu time: 31.75u 0.14s 31.89t Elapsed: 00:00:01
Start: Tue May 21 01:36:01 2013 End: Tue May 21 01:36:02 2013
WARNINGS ISSUED: 2