BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013968
(433 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224114846|ref|XP_002316872.1| predicted protein [Populus trichocarpa]
gi|222859937|gb|EEE97484.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/424 (62%), Positives = 320/424 (75%), Gaps = 4/424 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+KLV+ARKQMSILQ+PN+LVIQLKRFEGIFG KIDKAIAFEEVLVLSSFM K SQDPQP
Sbjct: 222 CQKLVAARKQMSILQAPNVLVIQLKRFEGIFGAKIDKAIAFEEVLVLSSFMSKTSQDPQP 281
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
EY LFGTIVHSG+SP+SGHYYAYIKDA+GRWYCCNDSYV++STLQEVLSEKVY+LFF R
Sbjct: 282 EYNLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVTLSTLQEVLSEKVYVLFFSRT 341
Query: 129 NQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVE 187
NQRP SA +FAS GVKS E NG +K KG VPLKA+ TKP EQSS+K S +S+++
Sbjct: 342 NQRPASAASSFASYGVKSCESNGCVEFKSSKGAVPLKALPTKPQVEQSSKKDISAMSRID 401
Query: 188 KVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKD--PFI 245
+VPS+P +K SI G+SG K P + NGKV+ K Q+ MNG VK++V EK KD
Sbjct: 402 RVPSSPPVKSSICGNSGSKSTPLSVNGKVDHLKGQNKGMNGNVKETVHVEKHDKDVSTVT 461
Query: 246 NTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPD 305
++NG K K VD V N A + SENG +Q+ N VKP + N T+S+ T GRV D
Sbjct: 462 SSNGFEKHKNVDAVEGENCHAFAAASENGHSQNAAFNSVKPLVCDSNGTTSKVTTGRVHD 521
Query: 306 PAKLLNGSVKFDTDISGSKRKSQE-SCILLAQDSESLAKLQELEEVLKKEASSVLQSCGW 364
+L NGS+K DISG KRK +E + ILLAQD++SLAK++E +E LK++AS +L SCG+
Sbjct: 522 HLELQNGSMKCCADISGLKRKLKEDTSILLAQDAQSLAKIEEFKEALKQQASLILGSCGF 581
Query: 365 SEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKDDLVKHLRSFS 424
+KV +MR+RKR C HE G P +LKKLLI DAK TF+SQIP SLK+DLVK L+SFS
Sbjct: 582 FDKVYDFMRARKRLCVHEAGNKPSGTELKKLLIADAKRTFISQIPESLKEDLVKRLQSFS 641
Query: 425 DGKR 428
KR
Sbjct: 642 QEKR 645
>gi|224121556|ref|XP_002330730.1| predicted protein [Populus trichocarpa]
gi|222872506|gb|EEF09637.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 255/424 (60%), Positives = 309/424 (72%), Gaps = 14/424 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CKKLV+ARKQMS+LQ+PN+LVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFM K SQDPQ
Sbjct: 208 NCKKLVAARKQMSVLQAPNVLVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMSKTSQDPQ 267
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
P+Y LFG IVHSG+S ++GHYYAYIKDAIG+WYCCNDSYV++STLQEV+SEK YILFF R
Sbjct: 268 PKYNLFGIIVHSGYSLEAGHYYAYIKDAIGQWYCCNDSYVTLSTLQEVMSEKAYILFFSR 327
Query: 128 ANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
NQRPVSA+ F SNGVKS E NG EA K K VPLKA+ TKP E+SSRK S +SK+
Sbjct: 328 TNQRPVSADSAFTSNGVKSCELNGSEASKSSKAAVPLKALPTKPQVEKSSRKDISAMSKI 387
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKD--PF 244
++VPS+P +KFS G+SG K V + NGKV+ HK Q+ +MNG VK++V E KD
Sbjct: 388 DRVPSSPPVKFSFVGNSGSKSVSSSVNGKVDPHKCQNKEMNGNVKETVHVEICDKDVSTV 447
Query: 245 INTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVP 304
++NG K K VD V + SENG +Q+ N VKP R
Sbjct: 448 TSSNGFEKHKNVDAVEGETHHTFAAASENGHSQNGAFNSVKP----------HICDRRGH 497
Query: 305 DPAKLLNGSVKFDTDISGSKRK-SQESCILLAQDSESLAKLQELEEVLKKEASSVLQSCG 363
D +L NG +K+ DISG KRK +ESCILL+QD++SLAK++E +EVL +EASS+L SCG
Sbjct: 498 DQLELQNGGMKYHADISGLKRKLKEESCILLSQDAQSLAKVEEFKEVLNQEASSILGSCG 557
Query: 364 WSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKDDLVKHLRSF 423
S+KV ++MR+RKR C E G P DLKKLLI DAK T++ QIP SLK+DLVK L+ F
Sbjct: 558 LSDKVYNFMRARKRSCIQEAGNKPSGTDLKKLLIADAKRTYIPQIPESLKEDLVKRLQLF 617
Query: 424 SDGK 427
S K
Sbjct: 618 SQEK 621
>gi|255577279|ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 644
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/424 (61%), Positives = 313/424 (73%), Gaps = 11/424 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SCKKLV+ARKQMSILQ+PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK SQDP+
Sbjct: 228 SCKKLVAARKQMSILQAPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKGSQDPR 287
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEY LFGTIVHSG+SP+SGHYYAYIKDA GRWYCCNDSYV++ST+Q+VLSEKVYILFF R
Sbjct: 288 PEYNLFGTIVHSGYSPESGHYYAYIKDATGRWYCCNDSYVTLSTMQDVLSEKVYILFFSR 347
Query: 128 ANQRPVSANGTFASNGVK-SHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
+NQRP SA +F +K + NG EA K TV AV + S EQ SRK ++SKV
Sbjct: 348 SNQRPGSAGPSFTP--IKPCNPNGCEASNISKVTVSPNAVDAEASVEQPSRKDIPSMSKV 405
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKD--PF 244
+KVPS+PR+KF+I G+S K + PT +GK HKSQ+++MNG +KD V EK KD
Sbjct: 406 DKVPSSPRVKFNIFGNSLSKRILPTGDGKAESHKSQNMEMNGSMKDRVYVEKHDKDMPST 465
Query: 245 INTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVP 304
IN NG KS++++ G A S NG TQ+ + KP +E N ++S T G P
Sbjct: 466 INGNGCNKSRKINDGETGQ--AITKASANGVTQNGASDSGKPCLYESNGSAS-TDKG--P 520
Query: 305 DPAKLLNGSVKFDTDISGSKRKSQE-SCILLAQDSESLAKLQELEEVLKKEASSVLQSCG 363
KL NG V + I KRK +E SCIL+AQD++S +++EL+E LK+EAS+VL+SCG
Sbjct: 521 GQHKLQNGGVNCHSGIPELKRKLKEDSCILIAQDAQSRTEVKELKEALKQEASTVLRSCG 580
Query: 364 WSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKDDLVKHLRSF 423
WS KV S+M SRKR CA E G P DIDLKKLLI +AKSTF+SQIP SLK+DLVK L+SF
Sbjct: 581 WSSKVYSFMCSRKRLCAREPGNLPSDIDLKKLLIAEAKSTFISQIPESLKEDLVKRLQSF 640
Query: 424 SDGK 427
S K
Sbjct: 641 SQEK 644
>gi|356556930|ref|XP_003546773.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 652
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 247/427 (57%), Positives = 306/427 (71%), Gaps = 13/427 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SCKKLV+A+KQMSILQ+PNILVIQLKRFEGI GGKIDKA+AFEEVLVLSSFMCKASQDPQ
Sbjct: 217 SCKKLVAAKKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLVLSSFMCKASQDPQ 276
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEYKLFGTIVHSG+SP+SGHYYAYIKDA+GRWYCC+DS V+V+TLQEVLSEKVYILFF R
Sbjct: 277 PEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSR 336
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVE 187
NQRPV++ + ASNGVK H NG + + K VP KAV K ++E S K ++SK
Sbjct: 337 TNQRPVASCNSLASNGVKPHSNGSQTSECPKVGVPPKAVHVKSNSELSPCKDMPSVSKTA 396
Query: 188 KVPSNPRLKFSISGSSGCKGVPPTS-NGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFIN 246
K PS+ R+KF I+GSS + P S NGKV+V ++Q +NG VKDSV E KD +
Sbjct: 397 KAPSSSRVKFDINGSSSKRNPAPVSVNGKVDVSRNQPSVINGHVKDSVSLENGKKDSSLP 456
Query: 247 T-NGSYKSK-RVDLVGRGNDLASVSTSENGDT--QSVGLNPVKPDPHEGNCTSSRTTAGR 302
T NG K+K VD + R ST NG T Q+V ++ VK D E + SR AGR
Sbjct: 457 TSNGIDKNKVAVDKLKRKE-----STVTNGHTGNQTVDIHSVKSDLKE-DTDRSRVIAGR 510
Query: 303 VPDPAKLLNGSVKFDTDISGSKRKSQES-CILLAQDSESLAKLQELEEVLKKEASSVLQS 361
VPD K + + I G+KRK QE CILLA D +S A++QEL+++L KEA SVL+S
Sbjct: 511 VPDNFKHESNDLNNKPTILGNKRKLQEDPCILLAHDGQSQARVQELKDILGKEAKSVLRS 570
Query: 362 CGWSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKDDLVKHLR 421
CGW++KV +MRS+K +T GD +++KLLI DA+ F+S+IP SLK D+++ LR
Sbjct: 571 CGWTDKVYEFMRSKKLHAQEAGNLTNGD-EIRKLLIGDAQGAFISKIPESLKQDMIERLR 629
Query: 422 SFSDGKR 428
SFS K+
Sbjct: 630 SFSQEKK 636
>gi|356525831|ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 641
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/426 (55%), Positives = 301/426 (70%), Gaps = 6/426 (1%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SCKKLV+A+KQMSILQ+PNILVIQLKRFEGI GGKIDKA+AFEEVLVLSSFMCKASQDPQ
Sbjct: 216 SCKKLVAAKKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLVLSSFMCKASQDPQ 275
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEYKLFGTIVHSG+SP+SGHYYAYIKDA+GRWYCC+DS V+V+TLQEVLSEKVYILFF R
Sbjct: 276 PEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFFSR 335
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVE 187
NQRPVS++ + ASNGVK H NG + + K VP KAV K ++E SS K +SK
Sbjct: 336 TNQRPVSSSNSLASNGVKPHSNGSQTSECPKVGVPPKAVHAKSNSELSSWKDIPRVSKTA 395
Query: 188 KVPSNPRLKFSISGSSGCK--GVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFI 245
K PS+ R+KF I+GSS K P + NGKV+V ++Q +NG VKDS E +D +
Sbjct: 396 KAPSSSRVKFDINGSSSSKRNSAPVSVNGKVDVCRNQPSAVNGHVKDSASLENGKEDSSL 455
Query: 246 NTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPD 305
T +V + ++VS G+ Q+V ++ VK D E + SR AGRVPD
Sbjct: 456 PTRNGIDENKVSVDKLKRKESTVSNGHTGN-QTVDIHSVKSDLKE-DTDRSRIIAGRVPD 513
Query: 306 PAKLLNGSVKFDTDISGSKRKSQ-ESCILLAQDSESLAKLQELEEVLKKEASSVLQSCGW 364
K + + I G+KRK Q + CILLA D +S A++QEL+++L KEA SVL+S GW
Sbjct: 514 NFKQESNGLNNKPTILGNKRKLQGDPCILLAHDGQSQARVQELKDILGKEAKSVLRSIGW 573
Query: 365 SEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKDDLVKHLRSFS 424
++KV +MRS+K + +T GD +++KLLI DA+ F+S+IP SLK D+++ L+SFS
Sbjct: 574 TDKVYEFMRSKKLRAQEAGNLTNGD-EIRKLLIGDAQGAFISKIPESLKQDMIQRLQSFS 632
Query: 425 DGKRGF 430
K F
Sbjct: 633 QEKIQF 638
>gi|296086774|emb|CBI32923.3| unnamed protein product [Vitis vinifera]
Length = 635
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/424 (55%), Positives = 295/424 (69%), Gaps = 8/424 (1%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CKKLVSARKQMSILQ+PN+LVIQLKRFEG++GGKIDK IAFEEVLVLSS+M KASQD
Sbjct: 213 NCKKLVSARKQMSILQAPNVLVIQLKRFEGLYGGKIDKLIAFEEVLVLSSYMNKASQDSH 272
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEY LF TIVHSG+SP+SGHYYAYIKDA+GRWYCCNDSYVS+STLQ VLSEKVYILFF R
Sbjct: 273 PEYNLFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYILFFSR 332
Query: 128 ANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
N R + FAS+ VK+ + NG K + +P+K TK + E SS STISKV
Sbjct: 333 TNARISPPSKAFASHNVKNRDCNGNNTSKNPRTALPVKTRHTKQNVEHSSGMDTSTISKV 392
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFIN 246
+KVPS+ ++K + + K V T NGK++VHK+Q ++ NG D V K + G N
Sbjct: 393 DKVPSSLQIKSNSFEKTVSKRVLATGNGKLDVHKNQILEKNG---DVVEKSEKGTPSLAN 449
Query: 247 TNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDP 306
+NG +KRVD N VS +EN Q++ N K D +EGN SR TA +
Sbjct: 450 SNGFSINKRVDAADSVNGF--VSANENDKLQNISGNSGKVDLYEGNVVKSRMTAEGRSNF 507
Query: 307 AKLLNGSVKFDTDISGSKRKSQE--SCILLAQDSESLAKLQELEEVLKKEASSVLQSCGW 364
++ NG VK +SG KRKSQ+ SCILLAQD+ SLAK++E ++ LKKEAS VL+SCGW
Sbjct: 508 HEVHNGGVKCPPGVSGVKRKSQDKGSCILLAQDAHSLAKVEEFKDGLKKEASLVLRSCGW 567
Query: 365 SEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKDDLVKHLRSFS 424
++++ +M SRKR CA + G P + KK I DAK +F+SQIP SLK+ L++ L+SFS
Sbjct: 568 TDRLYIFMHSRKRLCAQKSGDPPSSNESKKSFIADAKQSFISQIPESLKEKLIERLKSFS 627
Query: 425 DGKR 428
K+
Sbjct: 628 QEKQ 631
>gi|225462100|ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Vitis
vinifera]
Length = 631
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/424 (55%), Positives = 295/424 (69%), Gaps = 8/424 (1%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CKKLVSARKQMSILQ+PN+LVIQLKRFEG++GGKIDK IAFEEVLVLSS+M KASQD
Sbjct: 209 NCKKLVSARKQMSILQAPNVLVIQLKRFEGLYGGKIDKLIAFEEVLVLSSYMNKASQDSH 268
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEY LF TIVHSG+SP+SGHYYAYIKDA+GRWYCCNDSYVS+STLQ VLSEKVYILFF R
Sbjct: 269 PEYNLFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYILFFSR 328
Query: 128 ANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
N R + FAS+ VK+ + NG K + +P+K TK + E SS STISKV
Sbjct: 329 TNARISPPSKAFASHNVKNRDCNGNNTSKNPRTALPVKTRHTKQNVEHSSGMDTSTISKV 388
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFIN 246
+KVPS+ ++K + + K V T NGK++VHK+Q ++ NG D V K + G N
Sbjct: 389 DKVPSSLQIKSNSFEKTVSKRVLATGNGKLDVHKNQILEKNG---DVVEKSEKGTPSLAN 445
Query: 247 TNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVPDP 306
+NG +KRVD N VS +EN Q++ N K D +EGN SR TA +
Sbjct: 446 SNGFSINKRVDAADSVNGF--VSANENDKLQNISGNSGKVDLYEGNVVKSRMTAEGRSNF 503
Query: 307 AKLLNGSVKFDTDISGSKRKSQE--SCILLAQDSESLAKLQELEEVLKKEASSVLQSCGW 364
++ NG VK +SG KRKSQ+ SCILLAQD+ SLAK++E ++ LKKEAS VL+SCGW
Sbjct: 504 HEVHNGGVKCPPGVSGVKRKSQDKGSCILLAQDAHSLAKVEEFKDGLKKEASLVLRSCGW 563
Query: 365 SEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKDDLVKHLRSFS 424
++++ +M SRKR CA + G P + KK I DAK +F+SQIP SLK+ L++ L+SFS
Sbjct: 564 TDRLYIFMHSRKRLCAQKSGDPPSSNESKKSFIADAKQSFISQIPESLKEKLIERLKSFS 623
Query: 425 DGKR 428
K+
Sbjct: 624 QEKQ 627
>gi|449460062|ref|XP_004147765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
gi|449519156|ref|XP_004166601.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
Length = 646
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 232/431 (53%), Positives = 295/431 (68%), Gaps = 15/431 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CKKLV ARKQMSILQ+PNILVIQLKRFEGIFGGKIDKAIA+EE L LS+FMCK SQD +
Sbjct: 220 NCKKLVVARKQMSILQAPNILVIQLKRFEGIFGGKIDKAIAYEESLQLSNFMCKGSQDSR 279
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEYKLFGTIVHSGFS +SGHYYAYIKDA GRWYCCNDSYV+VSTLQEVLSEKVYILFF R
Sbjct: 280 PEYKLFGTIVHSGFSAESGHYYAYIKDASGRWYCCNDSYVTVSTLQEVLSEKVYILFFSR 339
Query: 128 ANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
NQRPV+A+ ASNGVKSHE N + K K +V K T+ EQSSRK S++SKV
Sbjct: 340 TNQRPVTASTALASNGVKSHECNRSDGSKVSKHSVVTKTAQTRSHVEQSSRKELSSLSKV 399
Query: 187 EKVPSNPRLKFSISGSSGCKG------VPPTSNGKVNVHKSQSVKMNGVVK-DSVPKEKS 239
+K + R K +++G S G P T NGK+ + + QS+K N +S+P E
Sbjct: 400 DKPTFSSRGKSNMNGHSNMNGHSNTIRAPSTINGKIVLEEDQSIKENEKENVNSLPLENG 459
Query: 240 GKDPFINTNG-SYKSKRV--DLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSS 296
+ NG S KS V D++ R + SV S NG+ S+G+ K DP N ++
Sbjct: 460 ARHKSSLGNGNSKKSFEVEHDVIER--EHKSVLVSSNGNGGSMGMKADKHDPCNINPMNN 517
Query: 297 RTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQELEEVLKKEAS 356
+ T+GR + ++ N S +++ +KRKS + CIL QD++S ++++L++ LK+E
Sbjct: 518 KFTSGRGSNHDEVDNAS-NCPSEVRRAKRKS-DFCILFQQDAQSRERVEDLKQDLKRETL 575
Query: 357 SVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKDDL 416
SVL+SCGW E+V + MRSRKR C E+ T DLKKLLI +AK F+S+IP SLK DL
Sbjct: 576 SVLRSCGWLEEVFNCMRSRKRLCLREMDTTQSCNDLKKLLIEEAKQKFISRIPESLKGDL 635
Query: 417 VKHLRSFSDGK 427
++ L+ FS K
Sbjct: 636 IEKLQLFSQEK 646
>gi|297834320|ref|XP_002885042.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
gi|297330882|gb|EFH61301.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
Length = 662
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 211/451 (46%), Positives = 267/451 (59%), Gaps = 36/451 (7%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C+KLV+ARKQMSILQ+PNILVIQLKRF GIFGGKIDKAI+F E+LVLS+FM KAS+DPQ
Sbjct: 215 TCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQ 274
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEYKLFG IVHSGFSP+SGHYYAY+KD++GRWYCCNDS+VS+STLQEVLSEK YILFF R
Sbjct: 275 PEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
Query: 128 ANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKT------P 180
+NQRP SA SNG SHE NG E K PL V KP +EQS +K P
Sbjct: 335 SNQRPASAKTLVTSNGTTSHEVNGCETSNPQKFIGPLNGVNMKPQSEQSFQKVKLASSKP 394
Query: 181 STI------------------SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQ 222
SKVEK P P K IS + G K V P+ NG+++ H+ +
Sbjct: 395 HKFIGPKLRAEQALQEDNLLSSKVEKAPLKPHAKVIISVNLGAKRVSPSVNGRLSFHQDE 454
Query: 223 SVKMNGVVKDSV----PKEKSGKD-PFINTNGSYKSKRVDLV-GRGNDLASVSTSENGDT 276
++ ++SV + KSG + F NG K G N +V E +
Sbjct: 455 NIAPKANKENSVSVLPTRVKSGTERKFGTENGGNGVKENGSAPGSSNHKVTVHPHERSNG 514
Query: 277 QSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQ 336
G + K + H C S+ + G V + S + S +++ CILL +
Sbjct: 515 SCNGGDHYKDNLHP--CGSNGSQNGTVHQEIERNGVSTTQSKGLCSS--TNEDPCILLRK 570
Query: 337 DSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLL 396
D S +L+ ++E LKK+A S L+SCGW +KV MR++KR + G G+ DLK+LL
Sbjct: 571 DESSRNELEAIKESLKKDALSHLRSCGWYDKVHISMRAKKRLRTEQSGGEDGN-DLKRLL 629
Query: 397 IRDAKSTFLSQIPNSLKDDLVKHLRSFSDGK 427
I D KS+ SQIP LK DLV + S K
Sbjct: 630 IEDVKSSLKSQIPEGLKADLVNRIWEISKKK 660
>gi|18400378|ref|NP_566486.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
gi|75262798|sp|Q9FPS2.1|UBP25_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 25; AltName:
Full=Deubiquitinating enzyme 25; Short=AtUBP25; AltName:
Full=Ubiquitin thioesterase 25; AltName:
Full=Ubiquitin-specific-processing protease 25
gi|11993490|gb|AAG42763.1|AF302673_1 ubiquitin-specific protease 25 [Arabidopsis thaliana]
gi|60543331|gb|AAX22263.1| At3g14400 [Arabidopsis thaliana]
gi|332641992|gb|AEE75513.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
Length = 661
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/451 (47%), Positives = 264/451 (58%), Gaps = 37/451 (8%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SC+KLV+ARKQMSILQ+PNILVIQLKRF GIFGGKIDKAI+F E+LVLS+FM KAS+DPQ
Sbjct: 215 SCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQ 274
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEYKLFG IVHSGFSP+SGHYYAY+KD++GRWYCCNDS+VS+STLQEVLSEK YILFF R
Sbjct: 275 PEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
Query: 128 ANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRK------TP 180
+NQRP SA SNG SHE NG E K PL KP AEQS +K P
Sbjct: 335 SNQRPASAKTLVTSNGTTSHEVNGCETSNPQKFIGPLNGFNMKPQAEQSFQKGNLASSKP 394
Query: 181 STI------------------SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQ 222
SKVEK P P K SIS + G K V P NG+++ H+ +
Sbjct: 395 HKFIRPKPRAEQAPLEDNLLSSKVEKAPLRPHAKVSISVNLGAKRVSPV-NGRLSFHQDE 453
Query: 223 SVKMNGVVKDSV----PKEKSGKD-PFINTNGSYKSKRVDLV-GRGNDLASVSTSENGDT 276
++ ++SV K SG + F NG K G N ++ E +
Sbjct: 454 NIAPKANKENSVSVLPTKVNSGTERKFGTENGGNGVKENGSAPGSSNHKVALHPHERSNG 513
Query: 277 QSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQ 336
S G + K + H C S+ + G P NG + S K ++ CILL +
Sbjct: 514 SSNGGDHHKDNLHP--CGSNGSQNG-TAHPETERNGVSTTQSKGLCSSTK-EDPCILLRK 569
Query: 337 DSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLL 396
D S +L+ ++E LKK+A S L+SCGW +KVL M ++KR + G G DLK+ L
Sbjct: 570 DESSRNELEAIKESLKKDALSHLRSCGWYDKVLISMHAKKRLRTEQSGGEDGS-DLKRRL 628
Query: 397 IRDAKSTFLSQIPNSLKDDLVKHLRSFSDGK 427
I D KS+ SQIP LK DLV + S K
Sbjct: 629 IEDVKSSLKSQIPEELKADLVNRIWEISKKK 659
>gi|18086363|gb|AAL57643.1| AT3g14400/MLN21_18 [Arabidopsis thaliana]
Length = 661
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 214/451 (47%), Positives = 264/451 (58%), Gaps = 37/451 (8%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SC+KLV+ARKQMSILQ+PNILVIQLKRF GIFGGKIDKAI+F E+LVLS+FM KAS+DPQ
Sbjct: 215 SCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQ 274
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
PEYKLFG IVHSGFSP+SGHYYAY+KD++GRWYCCNDS+VS+STLQEVLSEK YILFF R
Sbjct: 275 PEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 334
Query: 128 ANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRK------TP 180
+NQRP SA SNG SHE NG E K PL KP AEQS +K P
Sbjct: 335 SNQRPASAKTLVTSNGTTSHEVNGCETSNPQKFIGPLNGFNMKPQAEQSFQKGNLASSKP 394
Query: 181 STI------------------SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQ 222
SKVEK P P K SIS + G K V P NG+++ H+ +
Sbjct: 395 HKFIRPKPRAEQAPLEDNLLSSKVEKAPLRPHAKVSISVNLGAKRVSPV-NGRLSFHQDE 453
Query: 223 SVKMNGVVKDSV----PKEKSGKD-PFINTNGSYKSKRVDLV-GRGNDLASVSTSENGDT 276
++ ++SV K SG + F NG K G N ++ E +
Sbjct: 454 NIAPKANKENSVSVLPTKVNSGTERKFGTENGGNGVKENGSAPGSSNHKVALHPHERSNG 513
Query: 277 QSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQ 336
S G + K + H C S+ + G P NG + S K ++ CILL +
Sbjct: 514 SSNGGDHHKDNLHP--CGSNGSQNG-TAHPETERNGVSTTQSKGLCSSTK-EDPCILLRK 569
Query: 337 DSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLL 396
D S +L+ ++E LKK+A S L+SCGW +KVL M ++KR + G G DLK+ L
Sbjct: 570 DESSRNELEAIKESLKKDALSHLRSCGWYDKVLISMHAKKRLRTEQSGGEDGS-DLKRRL 628
Query: 397 IRDAKSTFLSQIPNSLKDDLVKHLRSFSDGK 427
I D KS+ SQIP LK DLV + S K
Sbjct: 629 IEDVKSSLKSQIPEELKADLVNRIWEISKKK 659
>gi|9279587|dbj|BAB01045.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 189/451 (41%), Positives = 236/451 (52%), Gaps = 66/451 (14%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SC+KLV+ARKQMSILQ+PNILVIQLKRF GIFGGKIDKAI+F E+LVLS+FM KAS
Sbjct: 215 SCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKAS---- 270
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
KD++GRWYCCNDS+VS+STLQEVLSEK YILFF R
Sbjct: 271 -------------------------KDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSR 305
Query: 128 ANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRK------TP 180
+NQRP SA SNG SHE NG E K PL KP AEQS +K P
Sbjct: 306 SNQRPASAKTLVTSNGTTSHEVNGCETSNPQKFIGPLNGFNMKPQAEQSFQKGNLASSKP 365
Query: 181 STI------------------SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQ 222
SKVEK P P K SIS + G K V P NG+++ H+ +
Sbjct: 366 HKFIRPKPRAEQAPLEDNLLSSKVEKAPLRPHAKVSISVNLGAKRVSPV-NGRLSFHQDE 424
Query: 223 SVKMNGVVKDSV----PKEKSGKD-PFINTNGSYKSKRVDLV-GRGNDLASVSTSENGDT 276
++ ++SV K SG + F NG K G N ++ E +
Sbjct: 425 NIAPKANKENSVSVLPTKVNSGTERKFGTENGGNGVKENGSAPGSSNHKVALHPHERSNG 484
Query: 277 QSVGLNPVKPDPHEGNCTSSRTTAGRVPDPAKLLNGSVKFDTDISGSKRKSQESCILLAQ 336
S G + K + H C S+ + G P NG + S K ++ CILL +
Sbjct: 485 SSNGGDHHKDNLHP--CGSNGSQNG-TAHPETERNGVSTTQSKGLCSSTK-EDPCILLRK 540
Query: 337 DSESLAKLQELEEVLKKEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLL 396
D S +L+ ++E LKK+A S L+SCGW +KVL M ++KR + G G DLK+ L
Sbjct: 541 DESSRNELEAIKESLKKDALSHLRSCGWYDKVLISMHAKKRLRTEQSGGEDGS-DLKRRL 599
Query: 397 IRDAKSTFLSQIPNSLKDDLVKHLRSFSDGK 427
I D KS+ SQIP LK DLV + S K
Sbjct: 600 IEDVKSSLKSQIPEELKADLVNRIWEISKKK 630
>gi|357133052|ref|XP_003568142.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like
[Brachypodium distachyon]
Length = 641
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/433 (37%), Positives = 241/433 (55%), Gaps = 30/433 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKL SARKQM IL++P +LVIQLKRFEGI GGKI++ I F+E L+LS FM +QD QP
Sbjct: 224 CKKLTSARKQMFILRAPKVLVIQLKRFEGINGGKINRNIGFKESLILSDFMYNKNQDSQP 283
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y LF +IVHSGFSP+SGHYYAY+KD+IGRWYCCNDS+VS+S+ Q+VLSEKVYILF+I +
Sbjct: 284 VYNLFASIVHSGFSPESGHYYAYVKDSIGRWYCCNDSHVSLSSSQDVLSEKVYILFYILS 343
Query: 129 NQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEK 188
++ ++S+ VKS + PLK K + S + K K
Sbjct: 344 SKTQKHCTNGYSSSAVKSSNTNGNGISSATCSEPLKIQLVKQNGPCSIKGIAPLPLKNGK 403
Query: 189 VPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDPFINTN 248
+ +K ++G + V +SNGK +++ ++NG V ++P E +G +P +N
Sbjct: 404 IAPGAHVKPIHLKNTGTEKV--SSNGKQDLNLRNKPEVNGNV--TLP-ESNGCEPG-KSN 457
Query: 249 GSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRVP---- 304
G ++D+ D + +G+ P+ + T A + P
Sbjct: 458 GIISCDKMDV-----DSQRMLQDADGNGH-----PIHSADLQETTIDKATCAEKYPEQPS 507
Query: 305 -DPAKLLNGSVKFDTDISGSKRKSQE-------SCILLAQDSESLAKLQE--LEEVLKKE 354
D A L+ +++ + GS E + A+DS L E +E+L +
Sbjct: 508 NDAASTLDKNIRSKENSKGSVLHHDEVPVNSVKEVVASAKDSALKHHLGEGKFKEMLAES 567
Query: 355 ASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSLKD 414
ASS L+SCGW + V +MRS KR+C GI + +++K LI D+ F S++P +L++
Sbjct: 568 ASSELRSCGWVDDVYQFMRSTKRRCIENTGIAQDNDEIRKQLITDSGRVFKSKVPEALRE 627
Query: 415 DLVKHLRSFSDGK 427
L+K L+S+ + K
Sbjct: 628 RLIKTLKSYYEDK 640
>gi|147856956|emb|CAN81381.1| hypothetical protein VITISV_018447 [Vitis vinifera]
Length = 471
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/291 (50%), Positives = 186/291 (63%), Gaps = 8/291 (2%)
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
D PEY LF TIVHSG+SP+SGHYYAYIKDA+GRWYCCNDSYVS+STLQ VLSEKVYILF
Sbjct: 151 DSHPEYNLFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYILF 210
Query: 125 FIRANQRPVSANGTFASNGVKSHE-NGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTI 183
F R N R + FAS+ VK+ + NG K + +P+K TK + E SS STI
Sbjct: 211 FSRTNARISPPSKAFASHNVKNRDCNGNNTSKNPRTALPVKTRHTKQNVEHSSGMDTSTI 270
Query: 184 SKVEKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSVPKEKSGKDP 243
SKV+KVPS+ ++K + + K V T NGK++VHK+Q ++ NG D V K K G
Sbjct: 271 SKVDKVPSSLQIKSNSFEKTVSKRVLATGNGKLDVHKNQILEKNG---DVVEKSKKGTAS 327
Query: 244 FINTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSSRTTAGRV 303
NTNG +KRVD N VS +EN Q++ N K D +EGN SR TA
Sbjct: 328 LANTNGFSINKRVDAADSVNGF--VSANENDKLQNISGNSGKVDLYEGNVVKSRMTAEGR 385
Query: 304 PDPAKLLNGSVKFDTDISGSKRKSQE--SCILLAQDSESLAKLQELEEVLK 352
+ ++ NG VK +SG KRKSQ+ SCILLAQD+ SLAK++E ++ +K
Sbjct: 386 SNFHEVHNGGVKCPPGVSGVKRKSQDKGSCILLAQDAHSLAKVEEFKDGMK 436
>gi|218197083|gb|EEC79510.1| hypothetical protein OsI_20578 [Oryza sativa Indica Group]
Length = 644
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 239/436 (54%), Gaps = 38/436 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKL SARKQ+ +L++P +LVIQLKRFEGI GGKI++ I F+E L LS FM +QD P
Sbjct: 225 CKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIEFKETLFLSDFMYNKNQDSLP 284
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y LFG+IVHSGFSPDSGHYYAY+KDAIGRWYCCNDS++S S+ Q+VLSEKVYILF+I +
Sbjct: 285 VYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILS 344
Query: 129 --NQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
Q+P S NG +S S+ NG PLK K + SS+ K
Sbjct: 345 TKTQKP-STNGYSSSAAKSSNSNGN-GISNATSNEPLKIPLVKQNGLCSSKGIAPPPLKN 402
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMN-GVVKDSVPKEKSGK--DP 243
K+ LK ++G V +SNGK ++ ++++ G+ +V SGK +P
Sbjct: 403 GKIAPGMHLKPIHLKNNGTGKV--SSNGKASIIPGNKLEVSEGLTLPAVNGRDSGKYAEP 460
Query: 244 F-INTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPH-EGNCT---SSRT 298
+N NGS + D+ + V + NG+ + + ++ + C S ++
Sbjct: 461 GKMNANGSVSCNKTDV-----NSQRVLPNTNGNGNPIHFSDLQETTDAKATCAEQYSEKS 515
Query: 299 TAGRVPD---PAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESL-AKLQE--LEEVLK 352
+ + D P S D+ S +DS SL +L+E +E+L
Sbjct: 516 SIASLEDSKNPVSCHEMSAVIVKDVVSS-----------GKDSSSLKHRLEEGKFKEMLA 564
Query: 353 KEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDID-LKKLLIRDAKSTFLSQIPNS 411
+ ASS L GW + V ++M + KR+ G TP D D ++K LI ++ F S+IP S
Sbjct: 565 ESASSELHLSGWVDDVRNFMHTIKRRRLQNTG-TPQDSDTMRKELISESGRIFRSKIPES 623
Query: 412 LKDDLVKHLRSFSDGK 427
L++ L++ LRS+ K
Sbjct: 624 LREHLIQALRSYYQDK 639
>gi|222632186|gb|EEE64318.1| hypothetical protein OsJ_19155 [Oryza sativa Japonica Group]
Length = 628
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 236/436 (54%), Gaps = 38/436 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKL SARKQ+ +L++P +LVIQLKRFEGI GGKI++ I F+E L LS FM +QD P
Sbjct: 209 CKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIEFKETLFLSDFMYNKNQDSLP 268
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y LFG+IVHSGFSPDSGHYYAY+KDAIGRWYCCNDS++S S+ Q+VLSEKVYILF+I +
Sbjct: 269 VYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILS 328
Query: 129 --NQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
Q+P S NG +S S+ NG PLK K + SS+ K
Sbjct: 329 TKTQKP-STNGYSSSAAKSSNSNGN-GISNATSNEPLKIPLVKQNGLCSSKGIAPPPLKN 386
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMN-GVVKDSVPKEKSGK--DP 243
K+ LK ++G V +SNGK ++ ++++ G+ +V SGK +P
Sbjct: 387 GKIAPGMHLKPIHLKNNGTGKV--SSNGKASIIPGNKLEVSEGLTLPAVNGRDSGKYAEP 444
Query: 244 F-INTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPD-PHEGNCT---SSRT 298
+N NGS + D+ + V + NG+ + + ++ + C S ++
Sbjct: 445 GKMNANGSVSCNKTDV-----NSQRVLPNTNGNGNPIHFSDLQETIDAKATCAEQYSEKS 499
Query: 299 TAGRVPD---PAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQE---LEEVLK 352
+ + D P S D+ S +DS SL E +E+L
Sbjct: 500 SIASLEDSKNPVSCHEMSAVIVKDVVSS-----------GKDSSSLKHHLEEGKFKEMLA 548
Query: 353 KEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDID-LKKLLIRDAKSTFLSQIPNS 411
+ ASS L GW + V ++M + KR+ G TP D D ++K LI ++ F S+IP S
Sbjct: 549 ESASSELHLSGWVDDVRNFMHTIKRRRLQNTG-TPQDSDTMRKELISESGRIFRSKIPES 607
Query: 412 LKDDLVKHLRSFSDGK 427
L++ L++ LRS+ K
Sbjct: 608 LREHLIQALRSYYQDK 623
>gi|115464817|ref|NP_001056008.1| Os05g0510300 [Oryza sativa Japonica Group]
gi|113579559|dbj|BAF17922.1| Os05g0510300 [Oryza sativa Japonica Group]
gi|215767681|dbj|BAG99909.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 644
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 236/436 (54%), Gaps = 38/436 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKL SARKQ+ +L++P +LVIQLKRFEGI GGKI++ I F+E L LS FM +QD P
Sbjct: 225 CKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIEFKETLFLSDFMYNKNQDSLP 284
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y LFG+IVHSGFSPDSGHYYAY+KDAIGRWYCCNDS++S S+ Q+VLSEKVYILF+I +
Sbjct: 285 VYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILS 344
Query: 129 --NQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
Q+P S NG +S S+ NG PLK K + SS+ K
Sbjct: 345 TKTQKP-STNGYSSSAAKSSNSNGN-GISNATSNEPLKIPLVKQNGLCSSKGIAPPPLKN 402
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMN-GVVKDSVPKEKSGK--DP 243
K+ LK ++G V +SNGK ++ ++++ G+ +V SGK +P
Sbjct: 403 GKIAPGMHLKPIHLKNNGTGKV--SSNGKASIIPGNKLEVSEGLTLPAVNGRDSGKYAEP 460
Query: 244 F-INTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPD-PHEGNCT---SSRT 298
+N NGS + D+ + V + NG+ + + ++ + C S ++
Sbjct: 461 GKMNANGSVSCNKTDV-----NSQRVLPNTNGNGNPIHFSDLQETIDAKATCAEQYSEKS 515
Query: 299 TAGRVPD---PAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQE---LEEVLK 352
+ + D P S D+ S +DS SL E +E+L
Sbjct: 516 SIASLEDSKNPVSCHEMSAVIVKDVVSS-----------GKDSSSLKHHLEEGKFKEMLA 564
Query: 353 KEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDID-LKKLLIRDAKSTFLSQIPNS 411
+ ASS L GW + V ++M + KR+ G TP D D ++K LI ++ F S+IP S
Sbjct: 565 ESASSELHLSGWVDDVRNFMHTIKRRRLQNTG-TPQDSDTMRKELISESGRIFRSKIPES 623
Query: 412 LKDDLVKHLRSFSDGK 427
L++ L++ LRS+ K
Sbjct: 624 LREHLIQALRSYYQDK 639
>gi|48475065|gb|AAT44134.1| unknown protein, contains ubiquitin carboxyl-terminal hydrolase
[Oryza sativa Japonica Group]
Length = 626
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 166/436 (38%), Positives = 236/436 (54%), Gaps = 38/436 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKL SARKQ+ +L++P +LVIQLKRFEGI GGKI++ I F+E L LS FM +QD P
Sbjct: 207 CKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIEFKETLFLSDFMYNKNQDSLP 266
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y LFG+IVHSGFSPDSGHYYAY+KDAIGRWYCCNDS++S S+ Q+VLSEKVYILF+I +
Sbjct: 267 VYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILS 326
Query: 129 --NQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
Q+P S NG +S S+ NG PLK K + SS+ K
Sbjct: 327 TKTQKP-STNGYSSSAAKSSNSNGN-GISNATSNEPLKIPLVKQNGLCSSKGIAPPPLKN 384
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNGKVNVHKSQSVKMN-GVVKDSVPKEKSGK--DP 243
K+ LK ++G V +SNGK ++ ++++ G+ +V SGK +P
Sbjct: 385 GKIAPGMHLKPIHLKNNGTGKV--SSNGKASIIPGNKLEVSEGLTLPAVNGRDSGKYAEP 442
Query: 244 F-INTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPD-PHEGNCT---SSRT 298
+N NGS + D+ + V + NG+ + + ++ + C S ++
Sbjct: 443 GKMNANGSVSCNKTDV-----NSQRVLPNTNGNGNPIHFSDLQETIDAKATCAEQYSEKS 497
Query: 299 TAGRVPD---PAKLLNGSVKFDTDISGSKRKSQESCILLAQDSESLAKLQE---LEEVLK 352
+ + D P S D+ S +DS SL E +E+L
Sbjct: 498 SIASLEDSKNPVSCHEMSAVIVKDVVSS-----------GKDSSSLKHHLEEGKFKEMLA 546
Query: 353 KEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDID-LKKLLIRDAKSTFLSQIPNS 411
+ ASS L GW + V ++M + KR+ G TP D D ++K LI ++ F S+IP S
Sbjct: 547 ESASSELHLSGWVDDVRNFMHTIKRRRLQNTG-TPQDSDTMRKELISESGRIFRSKIPES 605
Query: 412 LKDDLVKHLRSFSDGK 427
L++ L++ LRS+ K
Sbjct: 606 LREHLIQALRSYYQDK 621
>gi|226506140|ref|NP_001147905.1| UBP25 [Zea mays]
gi|195614492|gb|ACG29076.1| UBP25 [Zea mays]
Length = 644
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/436 (34%), Positives = 225/436 (51%), Gaps = 34/436 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK L SA+KQM +L++P +LVIQLKRFEGI GGKI++ I F+E L +S M SQDPQP
Sbjct: 223 CKTLTSAQKQMFMLRAPKVLVIQLKRFEGINGGKINRNIEFKETLGISDCMYNKSQDPQP 282
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y LFG IVHSG SP+SGHYYAY+KD G+W+CCNDS+VS+S+ Q VLSEKVYILF+I
Sbjct: 283 VYNLFGCIVHSGLSPESGHYYAYVKDPSGQWFCCNDSHVSLSSSQNVLSEKVYILFYILN 342
Query: 129 NQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEK 188
++ S+ ++ K + K K + + ++ + K
Sbjct: 343 SKTQKSSTNGYSFTAAKPFSTNVIDISSTSPSETSKIPLVKQNDLRLAKGNVLMPLRNGK 402
Query: 189 VPSNPRLK-FSISGSSGCKGVPPTSNGKVNVHKSQSVKMNGVVKDSV-----------PK 236
S P +K S+ K P NGK+N+ + ++N VK S P
Sbjct: 403 TASGPLIKPIHFKNSAAEKATP---NGKINLTSKINPEVNETVKLSESNGCKTEHFVGPS 459
Query: 237 EKSGKDPFINTNGSYKSKRVDLVGRGNDLASVSTSENGDTQSVGLNPVKPDPHEGNCTSS 296
+ + + G +S+R+ GN + G+T P + GN T +
Sbjct: 460 KINANNTISCGEGGEQSERILQDANGNGQPIHQSQYLGETSIGNATPAQQVTSNGNATPA 519
Query: 297 R--TTAGRVPDPAKLLNGSV--KFDTDISGSKRKSQESCILLAQDSESLAKLQELEEVLK 352
+ T+ G+ + GS K + SG+KR+ +E + +++L
Sbjct: 520 QQETSNGKASHAEQCFEGSSHQKEHANSSGNKRQLEE---------------DKFQKMLA 564
Query: 353 KEASSVLQSCGWSEKVLSYMRSRKRQCAHEVGITPGDIDLKKLLIRDAKSTFLSQIPNSL 412
K ASS L+ W + V ++MRS+KR+ +T ++K L+ D+ + F S++P SL
Sbjct: 565 KSASSELRLSVWMDDVYNFMRSQKRRRLLSSDVTQDFDAMRKQLVSDSAAIFRSKVPESL 624
Query: 413 KDDLVKHLRSFSDGKR 428
++L+K LRS+ +GK
Sbjct: 625 MENLIKRLRSYFEGKH 640
>gi|302781702|ref|XP_002972625.1| hypothetical protein SELMODRAFT_2140 [Selaginella moellendorffii]
gi|300160092|gb|EFJ26711.1| hypothetical protein SELMODRAFT_2140 [Selaginella moellendorffii]
Length = 303
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/119 (63%), Positives = 89/119 (74%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKL ARKQ+SI QSPN+LVIQLKRFE GGKID + FEE L L S M K S D P
Sbjct: 183 CKKLSVARKQLSIYQSPNVLVIQLKRFENFLGGKIDAHVEFEEELKLRSHMSKNSPDVHP 242
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+ +VHSGFS GHYYAY+KD G+WYCCNDS+VS ++ VLSE+VYILF++R
Sbjct: 243 DYSLYAVVVHSGFSQYGGHYYAYVKDPRGQWYCCNDSFVSAASSATVLSERVYILFYVR 301
>gi|302780611|ref|XP_002972080.1| hypothetical protein SELMODRAFT_2133 [Selaginella moellendorffii]
gi|300160379|gb|EFJ26997.1| hypothetical protein SELMODRAFT_2133 [Selaginella moellendorffii]
Length = 303
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/119 (63%), Positives = 89/119 (74%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKL ARKQ+SI QSPN+LVIQLKRFE GGKID + FEE L L S M K S D P
Sbjct: 183 CKKLSVARKQLSIYQSPNVLVIQLKRFENFLGGKIDTHVEFEEELKLRSHMSKNSPDVHP 242
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+ +VHSGFS GHYYAY+KD G+WYCCNDS+VS ++ VLSE+VYILF++R
Sbjct: 243 DYSLYAVVVHSGFSQYGGHYYAYVKDPRGQWYCCNDSFVSAASSATVLSERVYILFYVR 301
>gi|168013682|ref|XP_001759420.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689350|gb|EDQ75722.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 93/120 (77%), Gaps = 5/120 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKL ARKQMS+ ++PN+LVIQ+KRFE I+GGKID+ + FEE L L+ +MC+A +
Sbjct: 187 CKKLSPARKQMSVYRAPNVLVIQMKRFEDIYGGKIDRHVHFEERLCLAGYMCRAGK---- 242
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+G +VH+G S DSGHYY+Y+K++ G+WYCC+D+ VS Q VL+EK Y+LF++R+
Sbjct: 243 -YSLYGVVVHAGSSQDSGHYYSYVKESSGKWYCCDDARVSQVNAQTVLAEKAYMLFYVRS 301
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V+A K+ +I +SPN+L + LKRF GGKI K + + E L L FM ++ +PQ
Sbjct: 295 CKKMVTASKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYPESLDLRPFMSQSQGEPQ- 353
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSGFS +GHY+ YIK + G+WY NDS VSVS ++ VL+++ Y+LF+I+
Sbjct: 354 NYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIK 412
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V+A K+ ++ +S N+L I LKRF GGKI K + + E L L FM ++ +PQ
Sbjct: 265 CKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGKITKDVRYAEHLDLRPFMSQSHGEPQI 324
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSGFS +GHYY YIK + G+WY NDS VS+S ++ VL+++ Y+LF+IR+
Sbjct: 325 -YALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFYIRS 383
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V+A K+ ++ +S N+L I LKRF GGKI K + + E L L FM ++ +PQ
Sbjct: 265 CKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGKITKDVRYAEHLDLRPFMSQSHGEPQI 324
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSGFS +GHYY YIK + G+WY NDS VS+S ++ VL+++ Y+LF+IR+
Sbjct: 325 -YALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFYIRS 383
>gi|440803342|gb|ELR24249.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 916
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K A+KQ+SI ++PN+L IQLKRF +FGGKI K I++ L L FM K D
Sbjct: 151 CAKRSRAKKQLSIHEAPNVLAIQLKRFSYRSMFGGKISKFISYPAKLSLKPFMSKNQYDS 210
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
P Y L+G +VHSG+ +GHYY YIK++ G W+ NDS + ++V+ ++ Y+LF++
Sbjct: 211 NPCYDLYGVLVHSGYDTRAGHYYCYIKNSNGIWHEMNDSTRRQVSQEQVMKQQAYLLFYV 270
Query: 127 RANQRPVSANGTFASNGVKSHENGKEA 153
R+ P S NG +S E+ +EA
Sbjct: 271 RS---PASLPAQL--NGNESSESDQEA 292
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V+A K+ +I +S N+L + LKRF GGKI K + + E L L FM ++ +PQ
Sbjct: 265 CKKMVTASKRFTIHRSANVLTLALKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGEPQ- 323
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSGFS +GHY+ YIK + G+WY NDS VS+S ++ VL+++ Y+LF+I++
Sbjct: 324 VYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVLNQQAYVLFYIKS 383
>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
niloticus]
Length = 1174
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V+A K+ +I +S N+L + LKRF GGKI K + + E L L FM ++ +PQ
Sbjct: 266 CKKMVTASKRFTIHRSANVLTLSLKRFANFSGGKITKDVKYLEHLDLRPFMSQSQGEPQ- 324
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSGFS +GHY+ YIK + G+WY NDS VSVS ++ VL+++ Y+LF+I++
Sbjct: 325 LYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRTVLNQQAYVLFYIKS 384
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 83/120 (69%), Gaps = 1/120 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V+A K+ +I +S N+L + LKRF GGKI K + + E L L FM ++ +PQ
Sbjct: 211 CKKMVTASKRFTIHRSANVLTLALKRFANFSGGKITKDVKYPEYLDLRPFMSQSQGEPQ- 269
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSGFS +GHY+ YIK + G+WY NDS VS+S ++ VLS++ Y+LF+I++
Sbjct: 270 VYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVLSQQAYVLFYIKS 329
>gi|432869264|ref|XP_004071701.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Oryzias
latipes]
Length = 1055
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY YIK + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYIKASNGQWYQMNDSMVQSSNIKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGV 144
+ +A+G G+
Sbjct: 424 PETKKTADGQTTKTGM 439
>gi|410902504|ref|XP_003964734.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Takifugu
rubripes]
Length = 1050
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPATKRFTVHRTSNVLTVSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGV 144
+ +A+G GV
Sbjct: 424 PETKKNADGLTTKQGV 439
>gi|340368667|ref|XP_003382872.1| PREDICTED: hypothetical protein LOC100636480 [Amphimedon
queenslandica]
Length = 1097
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 5 CLFSCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA 62
C F CK+L A+KQ+++ P +L IQLKRFE +FGGKI+K + + E L + FM
Sbjct: 304 CPF-CKELTRAKKQLTVHVLPKVLTIQLKRFEFNTMFGGKINKTVQYPEHLDMRPFMSDK 362
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 122
+ P Y+L+ +VH G+S SGHYY Y++++ G WY NDS V+ + VLS++ Y+
Sbjct: 363 -EGPHEWYRLYAVLVHYGYSCHSGHYYCYVRNSNGVWYSMNDSMVNQVSKATVLSQQAYL 421
Query: 123 LFFIRANQ 130
LF+I+ ++
Sbjct: 422 LFYIKDSE 429
>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
harrisii]
Length = 1358
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFSGGKIAKDVKYPEYLDIRPYMSQPNGEPII 353
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GFS +GHYY YIK + G+WY NDS VS S ++ VL+++ Y+LF+IR+
Sbjct: 354 -YVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Monodelphis domestica]
Length = 1371
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFSGGKIAKDVKYPEYLDIRPYMSQPNGEPII 353
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GFS +GHYY YIK + G+WY NDS VS S ++ VL+++ Y+LF+IR+
Sbjct: 354 -YVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|449275065|gb|EMC84050.1| Ubiquitin carboxyl-terminal hydrolase 36, partial [Columba livia]
Length = 349
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA K+ +I ++PN+L + LKRF G GGKI K + + E+L + +M + S DP
Sbjct: 232 CKKKVSATKRFTIHRAPNVLTLALKRFAGFTGGKITKDVGYPELLNIRPYMSQTSGDPV- 290
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY ND+ V S ++ VL+++ Y+LF++R
Sbjct: 291 MYGLYAVLVHSGYSSHAGHYYCYVKASNGQWYQMNDNVVRPSNVKVVLNQQAYVLFYVR 349
>gi|348525234|ref|XP_003450127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Oreochromis
niloticus]
Length = 1149
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGV 144
+ +A+G G+
Sbjct: 424 PETKKNADGQTTKQGM 439
>gi|444724306|gb|ELW64916.1| Ubiquitin carboxyl-terminal hydrolase 42 [Tupaia chinensis]
Length = 1157
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 84/132 (63%), Gaps = 4/132 (3%)
Query: 1 MKDLCLFS---CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSS 57
M+ CL CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L +
Sbjct: 209 MQKACLNGSNKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRP 268
Query: 58 FMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
+M + + +P Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS
Sbjct: 269 YMSQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLS 327
Query: 118 EKVYILFFIRAN 129
++ Y+LF+IR++
Sbjct: 328 QQAYVLFYIRSH 339
>gi|47219080|emb|CAG00219.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1113
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 306 CKKKVPATKRFTVHRTSNVLTVSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 364
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 365 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 424
Query: 129 NQRPVSANGTFASNGV 144
+ +A+G GV
Sbjct: 425 PETKKNADGQATKQGV 440
>gi|330802246|ref|XP_003289130.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
gi|325080797|gb|EGC34337.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
Length = 810
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKKLV A K++ I SP IL +Q+KRF G +GGK++K I FE+ L LS +M +A+
Sbjct: 367 CKKLVKAAKRLQIHISPPILTVQIKRFSFLGSYGGKVNKHIQFEQTLNLSPYMTQAND-- 424
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH G S +SGHYY Y+K G WY +DS VS +LQ VL K Y+LF+
Sbjct: 425 HSIYDLYAVLVHLGGSTNSGHYYCYVKGTNGIWYNMDDSMVSQVSLQTVLGSKAYMLFYS 484
Query: 127 -RANQRPVSANGTFASNGV 144
R +R ++ N N V
Sbjct: 485 KRDTERSINTNTVIPRNIV 503
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ ++ ++ N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTVHRASNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GFS +GHYY YIK + G+WY NDS VS S ++ VL+++ Y+LF+IR+
Sbjct: 353 IYALYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLNQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|157820619|ref|NP_001100539.1| ubiquitin carboxyl-terminal hydrolase 36 [Rattus norvegicus]
gi|149054934|gb|EDM06751.1| ubiquitin specific protease 36 (predicted) [Rattus norvegicus]
Length = 1005
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ SI ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPASKRFSIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VLS++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLSQQAYVLFYLR 422
>gi|119575450|gb|EAW55048.1| ubiquitin specific peptidase 42, isoform CRA_b [Homo sapiens]
Length = 1176
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 257 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 316 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 375
Query: 129 N 129
+
Sbjct: 376 H 376
>gi|194376936|dbj|BAG63029.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 140 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 198
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 199 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 258
Query: 129 N 129
+
Sbjct: 259 H 259
>gi|189517356|ref|XP_688241.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Danio rerio]
Length = 1104
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 20/216 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKSHENGKEAYKGVKGTV--PLKAVATKPSAEQSSRK-TPSTISK 185
P N N V S + K T+ PL S+ Q ++K P+ + K
Sbjct: 424 ---PEKKNTDAKQNMVHSGRTNMTPEQLKKSTLNGPL-------SSPQVTKKLDPAQLRK 473
Query: 186 VEKVPSNPRLKFSISGSSGCKGV--PPTSNGKVNVH 219
++ V + + C G+ P SNG N H
Sbjct: 474 IQSVDGG----LGVPVARNCSGLQSPKLSNGTSNSH 505
>gi|10434352|dbj|BAB14232.1| unnamed protein product [Homo sapiens]
Length = 1198
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|119575449|gb|EAW55047.1| ubiquitin specific peptidase 42, isoform CRA_a [Homo sapiens]
Length = 1234
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|71052117|gb|AAH60846.2| USP42 protein, partial [Homo sapiens]
Length = 1202
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
garnettii]
Length = 1330
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V+A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVTASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|79750944|ref|NP_115548.1| ubiquitin carboxyl-terminal hydrolase 42 [Homo sapiens]
gi|124376914|gb|AAI32863.1| Ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|410266774|gb|JAA21353.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|114612043|ref|XP_527662.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan
troglodytes]
gi|410215148|gb|JAA04793.1| ubiquitin specific peptidase 42 [Pan troglodytes]
gi|410304720|gb|JAA30960.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|49616863|gb|AAT67238.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1324
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|397526145|ref|XP_003832997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan paniscus]
Length = 1316
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
Length = 1316
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|344239651|gb|EGV95754.1| Ubiquitin carboxyl-terminal hydrolase 42 [Cricetulus griseus]
Length = 838
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L I LKRF GGKI K + + E L + +M + + +P
Sbjct: 118 CKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 176
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VL+++ Y+LF+IR+
Sbjct: 177 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYIRS 236
Query: 129 N 129
+
Sbjct: 237 H 237
>gi|322510098|sp|Q9H9J4.3|UBP42_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1324
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|78057011|emb|CAE53097.1| ubiquitin-specific protease 42 [Homo sapiens]
Length = 1325
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|51094457|gb|EAL23716.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1246
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 257 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 316 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 375
Query: 129 N 129
+
Sbjct: 376 H 376
>gi|51094456|gb|EAL23715.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1350
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|351704980|gb|EHB07899.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Heterocephalus
glaber]
Length = 1272
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 277 CKKMVPASKRFTIHRSSNVLTLSLKRFANTTGGKIAKDVKYPEYLDIRPYMSQQNGEPI- 335
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ SGHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 336 IYVLYAVLVHAGFNCHSGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 395
Query: 129 N 129
+
Sbjct: 396 H 396
>gi|297679837|ref|XP_002817723.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pongo abelii]
Length = 1176
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 153 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 211
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 212 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 271
Query: 129 N 129
+
Sbjct: 272 H 272
>gi|109065910|ref|XP_001090104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Macaca
mulatta]
Length = 1317
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|403285988|ref|XP_003934290.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Saimiri
boliviensis boliviensis]
Length = 1319
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|332265913|ref|XP_003281959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Nomascus
leucogenys]
Length = 1315
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
Length = 1317
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|327264744|ref|XP_003217171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Anolis
carolinensis]
Length = 1114
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L I LKRF GGKI K + + E L + +M ++S DP
Sbjct: 303 CKKKVPASKRFTIHRASNVLTISLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 361
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 362 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 420
>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
intestinalis]
Length = 768
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 7 FSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
+ CKK V A K SI + PN+L +QLKRF G KI++ I + L L + + ++
Sbjct: 292 YQCKKSVPASKTFSIHRPPNVLTVQLKRFSSFMGNKINRDITYPSKLNLGPYTS-SDRNE 350
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
P Y L+ +VHSGFS +SGHYYAY K A G+WYC NDS V+ + + L+++ Y+LF+
Sbjct: 351 GPIYDLYAVLVHSGFSCNSGHYYAYAKAANGQWYCFNDSSVNQVSSHQALNQQAYLLFYH 410
Query: 127 RA 128
R
Sbjct: 411 RV 412
>gi|345319072|ref|XP_001520693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36
[Ornithorhynchus anatinus]
Length = 989
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ SI ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 307 CKKKVPASKRFSIHRASNVLTLSLKRFANFCGGKITKDVGYPEFLNIRPYMSQSSGDPV- 365
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 366 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHSSNIKVVLNQQAYVLFYLR 424
>gi|157786872|ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|149034935|gb|EDL89655.1| ubiquitin specific protease 42 (predicted) [Rattus norvegicus]
Length = 1325
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L I LKRF GGKI K + + E L + +M + + +P
Sbjct: 293 CKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 351
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VL+++ Y+LF+IR+
Sbjct: 352 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYIRS 411
Query: 129 N 129
+
Sbjct: 412 H 412
>gi|440899908|gb|ELR51150.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Bos grunniens
mutus]
Length = 1304
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|426355440|ref|XP_004045130.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gorilla
gorilla gorilla]
Length = 1237
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 215 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 273
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 274 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 333
Query: 129 N 129
+
Sbjct: 334 H 334
>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
Length = 1054
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 87/142 (61%), Gaps = 8/142 (5%)
Query: 4 LCLFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS 63
LC CKK V A K+ SI ++ N+L + LKRF GGKI K + + E L + +M ++S
Sbjct: 301 LCA-KCKKKVPASKRFSIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSS 359
Query: 64 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
+P Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+L
Sbjct: 360 GEPV-TYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVL 418
Query: 124 FFIR------ANQRPVSANGTF 139
F++R + Q P+S +F
Sbjct: 419 FYLRIPGSKKSPQGPISRAASF 440
>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
Length = 1361
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|354467793|ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Cricetulus griseus]
Length = 1285
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L I LKRF GGKI K + + E L + +M + + +P
Sbjct: 293 CKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 351
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VL+++ Y+LF+IR+
Sbjct: 352 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYIRS 411
Query: 129 N 129
+
Sbjct: 412 H 412
>gi|322967638|sp|E1B9W9.1|UBP42_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1333
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|331284138|ref|NP_001193568.1| ubiquitin carboxyl-terminal hydrolase 42 [Bos taurus]
gi|296473096|tpg|DAA15211.1| TPA: ubiquitin specific protease 42-like [Bos taurus]
Length = 1325
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|351698096|gb|EHB01015.1| Ubiquitin carboxyl-terminal hydrolase 36 [Heterocephalus glaber]
Length = 1107
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 96/178 (53%), Gaps = 13/178 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M +++ DP
Sbjct: 307 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSNGDPV- 365
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 366 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 425
Query: 129 NQRPVSANGTFASNG--VKSH------ENGKEAYKGVKGTVPLKAVATKPSAEQSSRK 178
S G + G + SH K A GV + P A KP RK
Sbjct: 426 PSSKKSPEGPISRGGSTLPSHPSMIPDHTKKNAGNGVTSSPP----AAKPQGAVPMRK 479
>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
Length = 743
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
caballus]
Length = 1393
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
Length = 1304
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
Length = 1175
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|116686116|ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus musculus]
gi|322967639|sp|B2RQC2.1|UBP42_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|148687090|gb|EDL19037.1| ubiquitin specific peptidase 42 [Mus musculus]
gi|187953717|gb|AAI37853.1| Ubiquitin specific peptidase 42 [Mus musculus]
Length = 1324
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L I LKRF GGKI K + + E L + +M + + +P
Sbjct: 293 CKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 351
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VL+++ Y+LF+IR+
Sbjct: 352 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFYIRS 411
Query: 129 N 129
+
Sbjct: 412 H 412
>gi|344289865|ref|XP_003416661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Loxodonta
africana]
Length = 1431
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Ovis aries]
Length = 1264
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 293 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 351
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 352 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 411
Query: 129 N 129
+
Sbjct: 412 H 412
>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
[Canis lupus familiaris]
Length = 1331
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 353 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|301762222|ref|XP_002916532.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Ailuropoda melanoleuca]
Length = 1186
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 152 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 210
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 211 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 270
Query: 129 N 129
+
Sbjct: 271 H 271
>gi|68533556|gb|AAH98528.1| Usp36 protein [Danio rerio]
Length = 914
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 17/216 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKSHENGKEAYKGVKGTV--PLKAVATKPSAEQSSRKT-PSTISK 185
++ + N V S + K T+ PL S+ Q ++K P+ + K
Sbjct: 424 PEKKNTDASNAKQNMVHSGRTNMTPEQLKKSTLNGPL-------SSPQVTKKLDPAQLRK 476
Query: 186 VEKVPSNPRLKFSISGSSGCKGV--PPTSNGKVNVH 219
++ V + + C G+ P SNG N H
Sbjct: 477 IQSVDGG----LGVPVARICSGLQSPKLSNGTSNSH 508
>gi|390368782|ref|XP_003731526.1| PREDICTED: uncharacterized protein LOC100889083 [Strongylocentrotus
purpuratus]
Length = 985
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
Query: 1 MKDLCLFS-CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSS 57
M + C+ + C + V A+K+ +I + PNIL + LKRFE GKI+K +++ E L L
Sbjct: 1 MTEFCILTKCNRKVLAQKRFTIHRCPNILTLCLKRFEFNRFSMGKINKEVSYSEYLNLRP 60
Query: 58 FMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
FM + ++ P Y+L+ + H G S +SGHYY Y++ WYC NDSYVS +L VL+
Sbjct: 61 FMSE-TKGPAVGYQLYAVLKHEGGSCNSGHYYCYVRAPNQSWYCMNDSYVSQCSLNRVLN 119
Query: 118 EKVYILFFIRANQRP 132
+ Y+LF+IR +P
Sbjct: 120 QNAYVLFYIRKPPKP 134
>gi|148702709|gb|EDL34656.1| mCG13907, isoform CRA_c [Mus musculus]
Length = 1092
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 342 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 400
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 401 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 459
>gi|37360390|dbj|BAC98173.1| mKIAA1453 protein [Mus musculus]
Length = 974
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 342 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 400
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 401 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 459
>gi|148702708|gb|EDL34655.1| mCG13907, isoform CRA_b [Mus musculus]
Length = 1037
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 287 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 345
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 346 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 404
>gi|354473286|ref|XP_003498867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus
griseus]
gi|344241778|gb|EGV97881.1| Ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus griseus]
Length = 1104
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 422
>gi|363740969|ref|XP_424101.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36, partial
[Gallus gallus]
Length = 884
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + S DP
Sbjct: 171 CKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNSGDPV- 229
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 230 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHCSNIKVVLNQQAYVLFYLR 288
>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
Length = 729
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L I LKRF GGKI K + + E L + +M + + +P
Sbjct: 293 CKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 351
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VL+++ Y+LF+IR+
Sbjct: 352 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFYIRS 411
Query: 129 N 129
+
Sbjct: 412 H 412
>gi|226442882|ref|NP_001028700.1| ubiquitin carboxyl-terminal hydrolase 36 [Mus musculus]
gi|251765139|sp|B1AQJ2.1|UBP36_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1098
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 422
>gi|148702707|gb|EDL34654.1| mCG13907, isoform CRA_a [Mus musculus]
Length = 1008
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 422
>gi|34784440|gb|AAH57470.1| Usp36 protein [Danio rerio]
Length = 758
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 113/216 (52%), Gaps = 17/216 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ ++ N+L + LKRF GGKI K + + E L + +M ++S DP
Sbjct: 305 CKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH G+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHPGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKSHENGKEAYKGVKGTV--PLKAVATKPSAEQSSRKT-PSTISK 185
++ + N V S + K T+ PL S+ Q ++K P+ + K
Sbjct: 424 PEKKNTDASNAKQNMVHSGRTNMTPEQLKKSTLNGPL-------SSPQVTKKLDPAQLRK 476
Query: 186 VEKVPSNPRLKFSISGSSGCKGV--PPTSNGKVNVH 219
++ V + + C G+ P SNG N H
Sbjct: 477 IQSVDGG----LGVPVARNCSGLQSPKLSNGTSNSH 508
>gi|348558248|ref|XP_003464930.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Cavia
porcellus]
Length = 1102
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+K V A K+ +I ++ N+L + LKRF + GGKI K + + E L + +M +++ DP
Sbjct: 305 CRKKVPASKRFTIHRTSNVLTLSLKRFANLSGGKITKDVGYPEFLNIRPYMSQSNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNVKVVLNQQAYVLFYLR 422
>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 1328
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 292 CKKMVPASKRFTIHRSSNVLTLSLKRFANSTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 350
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 351 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 410
Query: 129 N 129
+
Sbjct: 411 H 411
>gi|194676314|ref|XP_580726.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
Length = 1106
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 310 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 368
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 369 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQQAYVLFYLR 427
>gi|297487366|ref|XP_002696201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
gi|296476002|tpg|DAA18117.1| TPA: deubiquitinating enzyme 1-like [Bos taurus]
Length = 1101
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQQAYVLFYLR 422
>gi|326930828|ref|XP_003211542.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Meleagris
gallopavo]
Length = 874
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 160 CKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNTGDPV- 218
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 219 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHCSNIKVVLNQQAYVLFYLR 277
>gi|440892473|gb|ELR45652.1| Ubiquitin carboxyl-terminal hydrolase 36 [Bos grunniens mutus]
Length = 1098
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 303 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 361
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 362 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQQAYVLFYLR 420
>gi|193785689|dbj|BAG51124.1| unnamed protein product [Homo sapiens]
Length = 726
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 5 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 63
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 64 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 123
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 124 PGSKKSPEGLISRTGSSS 141
>gi|156359561|ref|XP_001624836.1| predicted protein [Nematostella vectensis]
gi|156211638|gb|EDO32736.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKK V A KQ+ I + PNIL IQLKRF+ +FGGK+ K I + E L L FM + P
Sbjct: 276 CKKKVPAHKQVLIHRPPNILTIQLKRFDYHHMFGGKVSKEITYTEHLDLRPFMTNP-KGP 334
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF- 125
+YKL+G +VHSG+S +SGHYY Y++ + WY NDS V L VL+++ Y+LF+
Sbjct: 335 PLKYKLYGVLVHSGYSCNSGHYYCYVRGSNDCWYNMNDSMVRQVGLNTVLAQQAYLLFYS 394
Query: 126 -IRANQRP 132
++A Q P
Sbjct: 395 RVKARQTP 402
>gi|431908709|gb|ELK12301.1| Ubiquitin carboxyl-terminal hydrolase 36 [Pteropus alecto]
Length = 1007
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V+ S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVNSSNIKVVLNQQAYVLFYLR 422
>gi|311266703|ref|XP_003131212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sus scrofa]
Length = 1140
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M +++ +P
Sbjct: 301 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKEVGYPEFLNIRPYMSQSNGEPV- 359
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 360 LYGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQMNDSLVHASNIKVVLNQQAYVLFYLR 418
>gi|116283676|gb|AAH27992.1| USP36 protein [Homo sapiens]
Length = 959
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|7023072|dbj|BAA91825.1| unnamed protein product [Homo sapiens]
Length = 954
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|410981888|ref|XP_004001484.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36-like, partial [Felis catus]
Length = 872
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L L +M ++S +P
Sbjct: 29 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNLRPYMSQSSGEPV- 87
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF+++
Sbjct: 88 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVRSSNIKVVLNQQAYVLFYMQ 146
>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
jacchus]
Length = 1319
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 294 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK G WY NDS VS S ++ VLS++ Y+LF+I++
Sbjct: 353 VYVLYAVLVHTGFNCHAGHYFCYIKAINGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIKS 412
Query: 129 N 129
+
Sbjct: 413 H 413
>gi|116284123|gb|AAH16487.1| USP36 protein [Homo sapiens]
Length = 963
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|444727772|gb|ELW68250.1| Ubiquitin carboxyl-terminal hydrolase 36 [Tupaia chinensis]
Length = 2413
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 619 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 677
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 678 MYGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLR 736
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDK 45
CKK V A K+ +I ++ N+L + LKRF GGKI K
Sbjct: 552 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITK 588
>gi|426346503|ref|XP_004040916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Gorilla
gorilla gorilla]
Length = 1123
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|410052277|ref|XP_001146571.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pan
troglodytes]
Length = 1037
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|390463858|ref|XP_003733115.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Callithrix jacchus]
Length = 1124
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 304 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNMRPYMSQNNGDPV- 362
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 363 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 422
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 423 PGSKKSPEGPISKTGSSS 440
>gi|124056592|sp|Q9P275.3|UBP36_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1121
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Ovis aries]
Length = 1080
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 305 CKRKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHASNIKVVLNQQAYVLFYLR 422
>gi|380790487|gb|AFE67119.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
gi|383411117|gb|AFH28772.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|297273759|ref|XP_001108648.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Macaca
mulatta]
Length = 1122
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 304 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 362
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 363 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 422
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 423 PGSKKSPEGLISRTGSSS 440
>gi|355568976|gb|EHH25257.1| hypothetical protein EGK_09045 [Macaca mulatta]
Length = 1126
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 308 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 366
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 367 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 426
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 427 PGSKKSPEGLISRTGSSS 444
>gi|384941532|gb|AFI34371.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|122114651|ref|NP_079366.3| ubiquitin carboxyl-terminal hydrolase 36 [Homo sapiens]
gi|119609940|gb|EAW89534.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609941|gb|EAW89535.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609942|gb|EAW89536.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
Length = 1123
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|47940448|gb|AAH71582.1| USP36 protein [Homo sapiens]
Length = 1123
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|168270556|dbj|BAG10071.1| ubiquitin carboxyl-terminal hydrolase 36 [synthetic construct]
Length = 1121
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|410222778|gb|JAA08608.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410266542|gb|JAA21237.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410297248|gb|JAA27224.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410340693|gb|JAA39293.1| ubiquitin specific peptidase 36 [Pan troglodytes]
Length = 1123
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|119609939|gb|EAW89533.1| ubiquitin specific peptidase 36, isoform CRA_a [Homo sapiens]
Length = 1075
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|402901257|ref|XP_003913570.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Papio anubis]
Length = 1123
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|7959165|dbj|BAA95977.1| KIAA1453 protein [Homo sapiens]
Length = 1123
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 307 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 365
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 366 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 425
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 426 PGSKKSPEGLISRTGSSS 443
>gi|355754426|gb|EHH58391.1| hypothetical protein EGM_08229 [Macaca fascicularis]
Length = 1130
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 308 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 366
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 367 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 426
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 427 PGSKKSPEGLISRTGSSS 444
>gi|397494913|ref|XP_003818312.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Pan paniscus]
Length = 1122
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|297701928|ref|XP_002827948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pongo abelii]
Length = 1124
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 306 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 364
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 365 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 424
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 425 PGSKKSPEGLISRTGSSS 442
>gi|345804557|ref|XP_540463.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Canis lupus
familiaris]
Length = 1116
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M +++ +P
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSNGEPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYLLFYLRI 423
Query: 129 NQRPVSANGTFA 140
S +G+ +
Sbjct: 424 PSSKRSPDGSLS 435
>gi|432118123|gb|ELK38013.1| Ubiquitin carboxyl-terminal hydrolase 36 [Myotis davidii]
Length = 889
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 253 CKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 311
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 312 VYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 370
>gi|301766030|ref|XP_002918424.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Ailuropoda melanoleuca]
Length = 1116
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M +++ +P
Sbjct: 305 CKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSNGEPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 422
>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
harrisii]
Length = 1142
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M +++ DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSNGDPI- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 422
>gi|281342803|gb|EFB18387.1| hypothetical protein PANDA_006891 [Ailuropoda melanoleuca]
Length = 1117
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M +++ +P
Sbjct: 305 CKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSNGEPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 422
>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
domestica]
Length = 1133
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M +++ DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 422
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 31/189 (16%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQ-- 64
C+K V A KQ S PN+L +QLKRF I FG K+ + + + E+L ++ ++ K Q
Sbjct: 386 CRKYVDALKQFSCHHLPNVLTVQLKRFSFISMFGSKVGQFVQYPEILDMAPYVNKTQQAS 445
Query: 65 --DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 122
D Y+L+ +VH+G S SGHYY Y++++ WY +D+ VS ++ QEV+ ++ YI
Sbjct: 446 MTDRGTRYRLYAVLVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVSTASQQEVMRQQAYI 505
Query: 123 LFFIR-ANQRPVS--------------------ANGTFASNGVKSHENGKEAYKGV---- 157
LF+ R AN RP + A AS+ + S E+G+ K V
Sbjct: 506 LFYTRIANPRPSAPVVAKADAQAKPKATEPKPKATPPLASDPITSEEDGRPQAKRVAREA 565
Query: 158 KGTVPLKAV 166
TVP KA
Sbjct: 566 AETVPDKAT 574
>gi|159469257|ref|XP_001692784.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278037|gb|EDP03803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 263
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
SC V A K++SI +PN+L + LKRFE G FG KI+K +AF L L +M A++ P
Sbjct: 144 SCASWVRATKRISIEDAPNVLTVHLKRFEYGGFGAKINKHVAFGTELNLRPYM-SATKGP 202
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+G +VH G+S +SGHY Y+K A G W+ C+D V+ + VL ++ YILF+I
Sbjct: 203 ALMYDLYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVAAVGERTVLDQRAYILFYI 262
Query: 127 R 127
R
Sbjct: 263 R 263
>gi|449476389|ref|XP_002192172.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42, partial
[Taeniopygia guttata]
Length = 1282
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L I LKRF GGKI+K + + E L L ++M ++ +P
Sbjct: 290 CKKMVPASKRYTIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLI 349
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSGF+ ++GHY +IK G WY ND+ V +S ++ VL+++ Y+LF+IR
Sbjct: 350 -YALYAVLVHSGFNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIR 407
>gi|149723495|ref|XP_001491180.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Equus
caballus]
Length = 1122
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ ++L + LKRF GGKI K + + E L + +M ++S +P
Sbjct: 305 CKKKVPASKRFTIHRTSSVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 VYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLR 422
>gi|344291363|ref|XP_003417405.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Loxodonta
africana]
Length = 1132
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ SI ++ ++L + LKRF GGKI K + + E L + +M +++ +P
Sbjct: 305 CKKKVPASKRFSIHRASSVLTLSLKRFANFTGGKITKDVGYPEFLNIRPYMSQSNGEPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V +S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKVSNGQWYQMNDSLVHLSNIKVVLNQQAYVLFYLR 422
>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 919
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKKLV A+K++ I +P IL Q+KRF G +GGKI++ I F++ L LS FM +++
Sbjct: 419 CKKLVKAQKRLQIHIAPPILTCQIKRFSFLGSYGGKINRQIQFDQSLNLSPFMTQSNN-- 476
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH G S SGHYY Y+K + G WY +DS VS +L VLS+K Y+LF+
Sbjct: 477 HSIYDLYAVLVHLGGSTSSGHYYCYVKGSNGIWYNMDDSSVSQVSLNTVLSQKAYMLFYS 536
Query: 127 RAN 129
+ N
Sbjct: 537 KRN 539
>gi|358421676|ref|XP_003585072.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Bos
taurus]
Length = 326
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L + LKRF GGKI K + + E L + +M + + +P
Sbjct: 140 CKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEP-I 198
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ +GHY+ YIK + G WY NDS VS S ++ VLS++ Y+LF+IR+
Sbjct: 199 IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRS 258
Query: 129 N 129
+
Sbjct: 259 H 259
>gi|10434580|dbj|BAB14306.1| unnamed protein product [Homo sapiens]
gi|37727299|gb|AAO34133.1| deubiquitinating enzyme 1 [Homo sapiens]
Length = 548
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPV- 363
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 364 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 424 PGSKKSPEGLISRTGSSS 441
>gi|384254219|gb|EIE27693.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 728
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 95/182 (52%), Gaps = 20/182 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFG--GKIDKAIAFEEVLVLSSFMCKASQDP 66
CKK V A +++ +PN L I LKRF + G K +A+ F+E L L FM A+ D
Sbjct: 342 CKKDVEAERRLCFEVAPNTLQICLKRFVSVDGVPMKNSQAVDFQEQLNLGPFMASAALDG 401
Query: 67 QP-EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y+L+G IVH G SP SGHY AY++ A G+W+ CND+ V T VLS + Y+L
Sbjct: 402 GPARYRLYGIIVHEGTCNSPHSGHYVAYVRGADGQWWECNDAQVYSCTTGYVLSRRAYML 461
Query: 124 FFIRANQRP-------------VSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKP 170
F+ R RP +A G S + +NG EA G T+P A +P
Sbjct: 462 FYAREAPRPSLPELAQLAAVPRSAATGVSGSKPSPTLQNGYEA--GHAATMPSAAQGDEP 519
Query: 171 SA 172
S+
Sbjct: 520 SS 521
>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
garnettii]
Length = 1120
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKRF GGKI K + + E L + +M + S +P
Sbjct: 304 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNSGEPV- 362
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S +GHYY Y+K + G+WY +DS V S+ + VLS++ Y+LF++R
Sbjct: 363 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMDDSLVHPSSGKAVLSQQAYVLFYLR 421
>gi|390353834|ref|XP_001179436.2| PREDICTED: uncharacterized protein LOC754104 [Strongylocentrotus
purpuratus]
Length = 1340
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C + V A+K+ +I + PNIL + LKRFE GKI+K +++ E L L FM + ++ P
Sbjct: 318 CNRKVLAQKRFTIHRCPNILTLCLKRFEFNRFSMGKINKEVSYSEYLNLRPFMSE-TKGP 376
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ + H G S +SGHYY Y++ WYC NDSYVS +L VL++ Y+LF+I
Sbjct: 377 AVGYQLYAVLKHEGGSCNSGHYYCYVRAPNQSWYCMNDSYVSQCSLNRVLNQNAYVLFYI 436
Query: 127 RANQRP 132
R +P
Sbjct: 437 RKPPKP 442
>gi|307103899|gb|EFN52156.1| hypothetical protein CHLNCDRAFT_139325 [Chlorella variabilis]
Length = 799
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 79/119 (66%), Gaps = 2/119 (1%)
Query: 10 KKLVSARKQMSILQSPNILVIQLKRFEGIFGG-KIDKAIAFEEVLVLSSFMCKASQDPQP 68
+K V A K+M++ +PN+L+IQLKRFE F G KI K I F+ L L FM +A P
Sbjct: 226 QKAVRAVKRMTVDSAPNVLMIQLKRFEFSFSGHKISKKIDFDLELDLGPFMSEAPLVP-A 284
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG S SGHYYAY++ G W+ C+D++V+ ++V+++K YILF+++
Sbjct: 285 LYDLYAVLVHSGHSVHSGHYYAYVRAPNGIWHICDDTHVAQVAERQVMAQKAYILFYLK 343
>gi|363739509|ref|XP_414742.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gallus gallus]
Length = 1323
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+V A K+ +I +S N+L I LKRF GGKI+K + + E L L ++M ++ +P
Sbjct: 289 CKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKINKEVKYPEYLDLRAYMSQSIGEPLI 348
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG + +GHY+ +IK A G WY ND+ V S ++ VL ++ Y+LF+IR
Sbjct: 349 -YALYAVLVHSGVNSHAGHYFCFIKAADGLWYQMNDASVVQSNIKTVLGQQAYLLFYIR 406
>gi|301102127|ref|XP_002900151.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262102303|gb|EEY60355.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 739
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 83/133 (62%), Gaps = 7/133 (5%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SC K A K +SI + PN+L+IQLKRF+ +FG KI + I F L ++S M K +D +
Sbjct: 336 SCGKPSRAEKGLSIAECPNVLMIQLKRFDLMFG-KIKRHIEFPRSLDIASGMSKNCEDRR 394
Query: 68 ---PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
+Y+L +VH+GFS D GHYYA++K + G+WY ND V +L VL +K Y+LF
Sbjct: 395 RGRTKYELHAVLVHAGFSTDCGHYYAFVKGSSGQWYEMNDDSVRWVSLDTVLQQKAYMLF 454
Query: 125 FIRA---NQRPVS 134
+ R ++RP S
Sbjct: 455 YSRVLPPSERPKS 467
>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 662
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A KQ +I +P L + LKRF FG K+ + ++E L L+ M K +++ P
Sbjct: 292 CKKPVNAEKQFTIDSAPLALTVHLKRFTP-FGRKLAHVVQYKEHLSLAGAMSKDAKEQSP 350
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+YKL+G I H+G P+SGHYYA+ K GRWY ND VS+ T + + Y+LF++R
Sbjct: 351 QYKLYGVICHAGSGPNSGHYYAFTKGPNGRWYEMNDDAVSLQTRPPLDLKSAYMLFYLR 409
>gi|348673035|gb|EGZ12854.1| hypothetical protein PHYSODRAFT_511733 [Phytophthora sojae]
Length = 742
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 84/135 (62%), Gaps = 7/135 (5%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SC K A K ++I + PN+L+IQLKRF+ +FG KI + I F +L ++S M K +D +
Sbjct: 320 SCGKPSRAEKGLTIAECPNVLMIQLKRFDLMFG-KIKRHIEFPRMLDIASGMSKNCEDRR 378
Query: 68 ---PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
+Y+L +VH+GFS D GHYYA++K + G+WY ND V ++ VL +K Y+LF
Sbjct: 379 RGRTKYELHAVLVHAGFSTDCGHYYAFVKGSSGQWYEMNDDTVRWVSIDMVLQQKAYMLF 438
Query: 125 FIRA---NQRPVSAN 136
+ R ++RP N
Sbjct: 439 YSRVLPLSERPKPKN 453
>gi|38014646|gb|AAH60390.1| Usp36 protein [Xenopus laevis]
Length = 715
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ S+ + N+L + LKRF GGKI K + + E L L +M + + +P
Sbjct: 303 CKKKVPASKRFSVHRDSNVLTLSLKRFANSSGGKITKEVGYPEFLNLRPYMSQRNGNPV- 361
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+W+ NDS V S ++ VL+++ Y+LF++R
Sbjct: 362 MYALYAVLVHSGYSCHAGHYYCYVKASNGQWFQMNDSLVHASNIKVVLNQQAYVLFYLRV 421
Query: 129 NQ 130
++
Sbjct: 422 SE 423
>gi|196000410|ref|XP_002110073.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
gi|190588197|gb|EDV28239.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
Length = 870
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 75/120 (62%), Gaps = 3/120 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK V A K+ +I ++P +L I +KRF +FGGK + I F E L L +M + P
Sbjct: 289 CKVKVKAMKKFTIHRAPVVLTIPIKRFNKFSLFGGKNSRKIKFTETLDLRPYMTSKTGSP 348
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+G +VHSG S +SGHYY Y+K + +WYC NDS+V+ S + VL ++ YILF+I
Sbjct: 349 LL-YNLYGVLVHSGGSCNSGHYYCYVKSSNNQWYCMNDSHVTKSNINAVLLQEAYILFYI 407
>gi|301616377|ref|XP_002937632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Xenopus
(Silurana) tropicalis]
Length = 809
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ S+ + N+L + LKRF GGKI K + + E L L +M + + P
Sbjct: 303 CKKKVPACKRFSVHRESNVLTLSLKRFANSSGGKITKEVGYPEFLNLRPYMSQRNGVPV- 361
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 362 MYALYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQQAYVLFYLRV 421
Query: 129 NQ 130
++
Sbjct: 422 SE 423
>gi|325190752|emb|CCA25244.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 699
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+ A K ++I + PN+LVIQLKRF+G GGK+ K I+F L L + CK+ +
Sbjct: 304 CRLFNRAEKGLTIAEYPNVLVIQLKRFDGFLGGKLKKHISFPLELALPN-TCKSKSQNRT 362
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+ +VH+G S D GHYYA++K + +WY ND V + VLS++ Y+LF+ R
Sbjct: 363 KYTLYAILVHAGHSTDCGHYYAFVKGSSRQWYEMNDDSVRWVSADTVLSQRAYMLFYSR 421
>gi|427793029|gb|JAA61966.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1076
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG--IFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C V A+K+ ++ ++PN+ QLKRF+ +FGGKI K +++ E L L +M DP
Sbjct: 355 CNIKVMAQKRFTVHRAPNVATFQLKRFDANRMFGGKITKHVSYPEHLELRPYMSDKHGDP 414
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L +VH G S +SGHY+ Y++++ G WYC +DS V ++ +VL+++ Y+LF++
Sbjct: 415 V-TYRLNAVLVHLGASCNSGHYFCYVRNSNGSWYCMDDSRVHQVSMGQVLNQQAYVLFYV 473
Query: 127 R 127
R
Sbjct: 474 R 474
>gi|339245907|ref|XP_003374587.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
gi|316972184|gb|EFV55872.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
Length = 918
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 77/120 (64%), Gaps = 3/120 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ VSARK ++I +PN+L I LKRF+ GKID+ I + + + L FM + Q P
Sbjct: 357 CKRRVSARKILTIHSAPNVLTIHLKRFDHF--GKIDRHIGYSDRMNLRPFMTE-KQGPPV 413
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y+L+G ++H+G S +SGHYYA++ + +G+W+ +DS V + + L Y+LF++R
Sbjct: 414 NYRLYGVVIHNGRSTNSGHYYAFVCNPLGQWHLMDDSRVCPVSSESALKASAYVLFYVRV 473
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 78/121 (64%), Gaps = 2/121 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V+A+K+ +I + N+L IQLKR+ G+ GGK+ + I+F E L + +M SQ
Sbjct: 309 CKQKVAAQKRFTIHKPSNVLTIQLKRY-GVMGGKVTRHISFPEKLNIRPYM-SVSQGAAI 366
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y+L+ +VH G S +SGHYY Y++ + WYC NDS V ++ VL+ + Y+LF+IR
Sbjct: 367 TYQLYAVLVHMGHSTNSGHYYCYVRSSNQAWYCMNDSMVQQTSQGRVLNSEAYMLFYIRC 426
Query: 129 N 129
+
Sbjct: 427 D 427
>gi|255579710|ref|XP_002530694.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223529750|gb|EEF31689.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 777
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK V A+K+++IL++PNIL I LKRF+ GK++K++ F EVL ++ +MC S D P
Sbjct: 524 CKSYVKAKKKLTILEAPNILTIVLKRFQSSNFGKLNKSVRFPEVLDMAPYMCGTS-DKSP 582
Query: 69 EYKLFGTIVHSGFSPD--SGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+Y L+ +VH D +GHY YIK + G W+ NDS V L+ VL E+ Y+L +
Sbjct: 583 QYSLYAVVVHRDTMSDASTGHYVCYIKTSRGEWFGINDSIVKPVELKRVLLEEAYMLLYA 642
Query: 127 R-ANQRPVSANGTFASNGVKSHENGKEA 153
R Q P ++ KS + EA
Sbjct: 643 RHCPQAPAVRKSNVETHCTKSKKRILEA 670
>gi|260801080|ref|XP_002595424.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
gi|229280670|gb|EEN51436.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
Length = 965
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 6/130 (4%)
Query: 1 MKDLCLFSCKKL---VSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSS 57
M D +SC+K A K++SI ++PN+L I LKRF + G K+ K + + E + L +
Sbjct: 312 MSDENAYSCEKCKRKCQAVKKLSIHRAPNVLTISLKRFNNM-GLKVTKEVQYSETMNLRA 370
Query: 58 FMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
+M + + P YKL+ +VH GFS GHYY +IK G W+ NDS V L VLS
Sbjct: 371 YMSQ--EGPPVIYKLYAVLVHQGFSCHGGHYYCFIKAPNGVWHMMNDSLVRQVGLNTVLS 428
Query: 118 EKVYILFFIR 127
++ Y+LF+IR
Sbjct: 429 QQAYLLFYIR 438
>gi|348568324|ref|XP_003469948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42-like [Cavia porcellus]
Length = 1224
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 75/121 (61%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK +V A K +I QS N+L++ LKRF GGKI K + + E L + +M + + +P
Sbjct: 290 CKIMVPASKNFTIHQSSNVLILSLKRFSNSTGGKIAKDVKYPEYLDIRPYMSQPNGEPI- 348
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ ++H+G++ GHY ++K + G WY NDS VS S + VLS++ Y+LF+IR
Sbjct: 349 VYTLYAVLIHAGYNCRVGHYLCHVKASNGLWYQMNDSKVSPSDTESVLSQQAYVLFYIRT 408
Query: 129 N 129
N
Sbjct: 409 N 409
>gi|297850108|ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
gi|297338777|gb|EFH69194.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
Length = 926
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK++SI ++PNIL I LKRF+ GKI+K I+F E+L + FM + P P
Sbjct: 628 CAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVP-P 686
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ IVH + + SGHY +Y+KD G WY +DS + + +V+SE Y+LF++
Sbjct: 687 LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHRVPMTQVMSEGAYMLFYM 746
Query: 127 RANQRP 132
R+ RP
Sbjct: 747 RSYPRP 752
>gi|302854895|ref|XP_002958951.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
gi|300255697|gb|EFJ39986.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
Length = 252
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
Query: 11 KLVSARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE 69
KLV A K++S+ ++PN+L + KRFE G FG KI+K + F L L +M + PQ
Sbjct: 136 KLVRAVKRISVEEAPNVLTVHFKRFEYGGFGAKINKKVDFGTQLDLRPYMSNV-KGPQQL 194
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+G +VH G+S +SGHY Y+K A G W+ C+D V+ + VL ++ YILF++R
Sbjct: 195 YELYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVTAVGERTVLDQRAYILFYVR 252
>gi|384252944|gb|EIE26419.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 840
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 76/119 (63%), Gaps = 2/119 (1%)
Query: 11 KLVSARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE 69
+LV ARK ++I + PN+LV QLKRFE ++G KI K + F L ++ +M PQ
Sbjct: 206 RLVRARKTITIERVPNVLVFQLKRFEYSMYGSKIGKKVDFYTHLDMAPYMSNRRAGPQ-M 264
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y+LFG +VH+G S SGHY+ +++ G W+ +D VS + + VL +K YILF+IR+
Sbjct: 265 YELFGVLVHAGHSVHSGHYFCFVRAPNGLWHRMDDVQVSQVSERVVLGQKAYILFYIRS 323
>gi|334182643|ref|NP_001185019.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|332191422|gb|AEE29543.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 928
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK++SI ++PNIL I LKRF+ GKI+K I+F E+L + FM + P P
Sbjct: 628 CAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVP-P 686
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ IVH + + SGHY +Y+KD G WY +DS + + +V+SE Y+LF++
Sbjct: 687 LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYM 746
Query: 127 RANQRP 132
R+ RP
Sbjct: 747 RSYPRP 752
>gi|11993475|gb|AAG42756.1|AF302665_1 ubiquitin-specific protease 15 [Arabidopsis thaliana]
Length = 924
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK++SI ++PNIL I LKRF+ GKI+K I+F E+L + FM + P P
Sbjct: 624 CAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVP-P 682
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ IVH + + SGHY +Y+KD G WY +DS + + +V+SE Y+LF++
Sbjct: 683 LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYM 742
Query: 127 RANQRP 132
R+ RP
Sbjct: 743 RSYPRP 748
>gi|18394440|ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|166201354|sp|Q9FPS9.2|UBP15_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; Short=AtUBP15; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|332191421|gb|AEE29542.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 924
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK++SI ++PNIL I LKRF+ GKI+K I+F E+L + FM + P P
Sbjct: 624 CAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVP-P 682
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ IVH + + SGHY +Y+KD G WY +DS + + +V+SE Y+LF++
Sbjct: 683 LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYM 742
Query: 127 RANQRP 132
R+ RP
Sbjct: 743 RSYPRP 748
>gi|5734755|gb|AAD50020.1|AC007651_15 Unknown protein [Arabidopsis thaliana]
Length = 891
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK++SI ++PNIL I LKRF+ GKI+K I+F E+L + FM + P P
Sbjct: 591 CAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVP-P 649
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ IVH + + SGHY +Y+KD G WY +DS + + +V+SE Y+LF++
Sbjct: 650 LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFYM 709
Query: 127 RANQRP 132
R+ RP
Sbjct: 710 RSYPRP 715
>gi|359494410|ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Vitis
vinifera]
Length = 906
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+SI ++PNIL I LKRF+ GKI+K I F ++L + FM + D P
Sbjct: 565 CTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFM-TGTYDVPP 623
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY AY+KD G W+ +D+ V + +V+SE YILF++
Sbjct: 624 LYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMSEGAYILFYM 683
Query: 127 RANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
R+ RP A K ++ P A +SSR P V
Sbjct: 684 RSWPRPPRAFPV----------------KAIQQQAPASAKHCSSKTHKSSRSKPRG-DFV 726
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNG 214
PSNP+ + S SS TSNG
Sbjct: 727 GLEPSNPKREVSPGFSSA------TSNG 748
>gi|47226065|emb|CAG04439.1| unnamed protein product [Tetraodon nigroviridis]
Length = 269
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SCKK+V+A K ++I +S N+L + LKRF+ G KI+K + + E L L FM + + P
Sbjct: 151 SCKKMVTAIKSLTIHRSTNVLTLVLKRFDICAGEKINKDVRYPEYLDLYPFMSETQEKPL 210
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+ +VH G S SGHY+ YIK + G+WY ND+ V ++ +Q VL+++ Y+LF+I+
Sbjct: 211 V-YRLYAVLVHYGRSSHSGHYFCYIKASDGQWYRMNDNSVIITDIQSVLAKQAYVLFYIK 269
>gi|356509862|ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 742
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 19/229 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK V A K++++ Q+PNIL I LKRF+ GK++K + F E L LS +M + D
Sbjct: 364 CKGYVKAWKRLTVKQAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSEVG-DGSD 422
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ +VH S GHY YIKD G WY +D VS L+EVLS+ Y+L +
Sbjct: 423 IYKLYAVVVHIDMLNASFFGHYICYIKDFCGNWYRIDDWKVSSVELEEVLSQGAYMLLYS 482
Query: 127 RANQRPVSANGTFASNGVKSHENGKEA-YKGVKGTVPLKAVATKPSAEQSSRKTPSTISK 185
R N RP +G++S E+ + A + +K VP T+ + S KT +
Sbjct: 483 RVNARP---------SGLQSIESSETAEVQTIKSEVP--PGPTEQAECLSDMKTETYSGG 531
Query: 186 VEKVPSNPRLKFSISGSSGCKGVPPTS-NGKVNVHKSQSVKMNGVVKDS 233
E P + L+ + S C+ V T N +V + + V + V +S
Sbjct: 532 CEAFPFDSSLELKV---SCCENVSLTEMNSEVKREQFKDVDIIDVANES 577
>gi|255578536|ref|XP_002530131.1| conserved hypothetical protein [Ricinus communis]
gi|223530356|gb|EEF32247.1| conserved hypothetical protein [Ricinus communis]
Length = 870
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 92/161 (57%), Gaps = 17/161 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+SI ++PNIL I LKRF+ GKI+K I F ++L + +M + D P
Sbjct: 554 CATYVRARKQLSIHEAPNILTIVLKRFQEGKHGKINKYITFPDMLDMIPYM-TGTIDIPP 612
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY AY+KD G W+ +D+ V + +V+SE VYILF+I
Sbjct: 613 LYMLYAVVVHLDTLNASFSGHYVAYVKDLQGNWFRVDDTEVRPVPMSQVMSEGVYILFYI 672
Query: 127 RANQRP-----------VSANGTFASNGVKSHENGKEAYKG 156
R+ RP V A+ A +G+KS + K + KG
Sbjct: 673 RSCPRPQKEYFEAIQQQVPAS---AEHGIKSLKTQKPSRKG 710
>gi|147832982|emb|CAN68406.1| hypothetical protein VITISV_035043 [Vitis vinifera]
Length = 945
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 101/208 (48%), Gaps = 26/208 (12%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+SI ++PNIL I LKRF+ GKI+K I F ++L + FM + D P
Sbjct: 604 CTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFM-TGTYDVPP 662
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY AY+KD G W+ +D+ V + +V+SE YILF++
Sbjct: 663 LYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMSEGAYILFYM 722
Query: 127 RANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
R+ RP A K ++ P A +SSR P V
Sbjct: 723 RSWPRPPRAF----------------PVKAIQQQAPASAKHCSSKTHKSSRSKPRG-DFV 765
Query: 187 EKVPSNPRLKFSISGSSGCKGVPPTSNG 214
PSNP+ + + SS TSNG
Sbjct: 766 GLEPSNPKREVAPGFSSA------TSNG 787
>gi|395330004|gb|EJF62389.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 691
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 3/118 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A KQ +I ++P +L + LKRF + G KI I ++E L L FM + S P
Sbjct: 317 CKKPVNADKQFTIHEAPAVLTVHLKRFSPM-GRKIAIPIRYDERLSLEPFMSEGSFGPN- 374
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+G I H+G P+SGHYYA++K A GRW+ ND YV+ + + YILF+I
Sbjct: 375 -YTLYGVISHAGNGPNSGHYYAHVKGANGRWHEMNDDYVAPLSGVPTSLKNAYILFYI 431
>gi|357148128|ref|XP_003574640.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Brachypodium distachyon]
Length = 970
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PN+L I LKR++ GKI KAI F E L LSS+M + D P
Sbjct: 637 CKSYERAKKKLTISEAPNVLTIALKRYQSGKFGKISKAIRFPETLNLSSYM-STTDDNSP 695
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+G +VH + SGHY Y+KD G+WY +DS V +L+ V+S+ Y+L +
Sbjct: 696 VYSLYGVVVHHDVMNAAFSGHYVCYVKDTHGKWYKTDDSQVKSVSLENVMSKCAYMLLYA 755
Query: 127 RANQRPVSA 135
R + R S+
Sbjct: 756 RCSPRAPSS 764
>gi|296086860|emb|CBI33027.3| unnamed protein product [Vitis vinifera]
Length = 894
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+SI ++PNIL I LKRF+ GKI+K I F ++L + FM + D P
Sbjct: 594 CTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFM-TGTYDVPP 652
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY AY+KD G W+ +D+ V + +V+SE YILF++
Sbjct: 653 LYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMSEGAYILFYM 712
Query: 127 RANQRPVSA 135
R+ RP A
Sbjct: 713 RSWPRPPRA 721
>gi|356556906|ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 989
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+SI ++PNIL I LKRF+ GKI+K I F E+L + FM + D P
Sbjct: 655 CTSYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFM-TGTGDIPP 713
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W+ +D+ V + +V+SE YILF++
Sbjct: 714 LYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDAEVQPVLINQVMSEGAYILFYM 773
Query: 127 RANQRP 132
R+ RP
Sbjct: 774 RSCPRP 779
>gi|441643579|ref|XP_003278478.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Nomascus leucogenys]
Length = 1122
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++ N+L + LKR + + GKI K + + E L + +M + + DP
Sbjct: 305 CKKKVPASKRFTIHRTSNVLTLSLKRCQ-LQRGKITKDVGYPEFLNIRPYMSQNNGDPV- 362
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VHSG+S +GHYY Y+K + G+WY NDS V S ++ VL+++ Y+LF++R
Sbjct: 363 MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 422
Query: 129 NQRPVSANGTFASNGVKS 146
S G + G S
Sbjct: 423 PGSKKSPEGLISRTGSSS 440
>gi|449511450|ref|XP_004163959.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 16-like, partial [Cucumis sativus]
Length = 1115
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK++SIL++PNIL I LKRF+ GK++K + F E+L L+ +M S D P
Sbjct: 783 CNSYVKARKRLSILEAPNILTIALKRFQSGKFGKLNKPVIFSEILDLAPYMSSRS-DKSP 841
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G IVH + SGHY YI++ +W+ +DS V+ ++ VL+ Y+LF+
Sbjct: 842 VYRLYGVIVHLDVMNAAFSGHYVCYIRNNQNKWFKVDDSTVTAMDVKNVLTRGAYMLFYA 901
Query: 127 RANQR 131
R + R
Sbjct: 902 RCSPR 906
>gi|449461409|ref|XP_004148434.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cucumis
sativus]
Length = 1113
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK++SIL++PNIL I LKRF+ GK++K + F E+L L+ +M S D P
Sbjct: 781 CNSYVKARKRLSILEAPNILTIALKRFQSGKFGKLNKPVIFSEILDLAPYMSSRS-DKSP 839
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G IVH + SGHY YI++ +W+ +DS V+ ++ VL+ Y+LF+
Sbjct: 840 VYRLYGVIVHLDVMNAAFSGHYVCYIRNNQNKWFKVDDSTVTAMDVKNVLTRGAYMLFYA 899
Query: 127 RANQR 131
R + R
Sbjct: 900 RCSPR 904
>gi|356498842|ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1036
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 86/148 (58%), Gaps = 5/148 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+M++L++PN+L I LKRF+ GK++K I F E+L L+ FM S P
Sbjct: 691 CKSYEKAKKKMTVLEAPNVLTIALKRFQSGKFGKLNKPIRFPEILDLAPFMSGTSD--LP 748
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G +VH + SGHY Y+K+ RW+ +DS V+ L+ VL++ Y+LF+
Sbjct: 749 IYRLYGVVVHLDIMNAAFSGHYVCYVKNFQSRWFKVDDSVVTAVELESVLAKGAYMLFYS 808
Query: 127 RANQR-PVSANGTFASNGVKSHENGKEA 153
R + R P + S+ K NGK A
Sbjct: 809 RCSPRAPRLIRNSIVSSDSKWKLNGKTA 836
>gi|353234548|emb|CCA66572.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Piriformospora
indica DSM 11827]
Length = 701
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A+KQ+++ ++P L IQLKRF +G KI I + E L L+ + P
Sbjct: 321 CKKPVNAKKQITVHKAPMALCIQLKRFSP-WGRKITNMIDYPETLSLNEILSDNQTSPM- 378
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y+L+G IVH+G P+SGHYY ++K+ G+W ND V + S+ Y+LF++R
Sbjct: 379 -YQLYGVIVHAGSGPNSGHYYTFVKNYAGKWLRINDDEVDTIPRAPLGSKNAYMLFYMR- 436
Query: 129 NQRPVSANGTFAS 141
RP + N AS
Sbjct: 437 --RPFNINDVVAS 447
>gi|409049827|gb|EKM59304.1| hypothetical protein PHACADRAFT_88204 [Phanerochaete carnosa
HHB-10118-sp]
Length = 667
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A KQ ++ +P +L I LKRF + G KI + ++E + L M + P
Sbjct: 315 CKKHVAADKQFTVHDAPMVLTIHLKRFSPM-GRKIPHLVGYDERISLQPVMSEGQHGP-- 371
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y LFG I H+G P SGHYYA++KDA G+W+ ND VS + + + YILF+IR
Sbjct: 372 TYTLFGVISHAGGGPSSGHYYAHVKDAAGQWHEMNDDTVSRQSGAPLGMKNAYILFYIR 430
>gi|222640740|gb|EEE68872.1| hypothetical protein OsJ_27681 [Oryza sativa Japonica Group]
Length = 897
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PN+L I LKR++ GKI+KAI F E L L +M + D P
Sbjct: 554 CKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQRYMSPKADDTSP 613
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY Y+KD G+WY +DS V +L+ V+S+ Y+L +
Sbjct: 614 VYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYMLLYA 673
Query: 127 RANQRPVSA 135
R + R S+
Sbjct: 674 RCSPRAPSS 682
>gi|357480083|ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 855
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG-KIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ++I ++P +L I LKRF KI K + F+ L L F+ S D
Sbjct: 277 CKQKVQAVKQLTIHKAPYVLAIHLKRFYAHDPNIKIKKKVRFDSALNLKPFV-SGSSDGD 335
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VHSGFS SGHYY Y++ + WY +D+ VS QEVL+++ Y+LF++R
Sbjct: 336 VKYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWYTLDDTRVSHVGEQEVLNQQAYMLFYVR 395
>gi|115476910|ref|NP_001062051.1| Os08g0478500 [Oryza sativa Japonica Group]
gi|42407867|dbj|BAD09009.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|113624020|dbj|BAF23965.1| Os08g0478500 [Oryza sativa Japonica Group]
Length = 978
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PN+L I LKR++ GKI+KAI F E L L +M + D P
Sbjct: 635 CKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQRYMSPKADDTSP 694
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY Y+KD G+WY +DS V +L+ V+S+ Y+L +
Sbjct: 695 VYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYMLLYA 754
Query: 127 RANQRPVSA 135
R + R S+
Sbjct: 755 RCSPRAPSS 763
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 12/166 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK+ V A K+ S+ + PN+L + LKRF+ + GKI + + F E L L +M +P
Sbjct: 282 CKQKVPALKRFSVHKPPNVLTVSLKRFDYSKMVQGKIGRHVHFPEKLNLRPYMSNRGGEP 341
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+ L +VHSG++ +SGHYY Y+K + G WYC NDS V ++ VL + Y+LF+
Sbjct: 342 IL-FHLNAVLVHSGYTANSGHYYCYVKASSGSWYCMNDSNVQQVSVNRVLGAEAYVLFYT 400
Query: 127 RA-----NQRPVSANGTFASNGVKSHE----NGKEAYKGVKGTVPL 163
+A +PVS+ + A++ K NG Y VP+
Sbjct: 401 KAFTEISAPKPVSSMTSLANHVDKKANLKLLNGLRKYPSTDTGVPV 446
>gi|118388360|ref|XP_001027278.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89309048|gb|EAS07036.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 778
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKLV A+K I Q PN+L +Q+KRF F KI+ F + +S ++ +A++ P+
Sbjct: 238 CKKLVEAQKGYVIHQLPNVLTLQIKRFNN-FMMKINTHTQFPAEIDISKYVQQANKKPEI 296
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G ++H G GHYY Y+K++ WYC NDS VS + QEV E+ Y+LF+++
Sbjct: 297 -YDLYGVLIHIGGGLHFGHYYCYVKNSNDMWYCMNDSSVSQRSFQEVSKERPYLLFYVK 354
>gi|218202292|gb|EEC84719.1| hypothetical protein OsI_31685 [Oryza sativa Indica Group]
Length = 927
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PNIL I LKR++ GKI+KA+ F E L LS++M A D P
Sbjct: 567 CKSYERAKKKLTISEAPNILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTA-DDISP 625
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH + SGHY Y+KD G+W+ +DS V +L++VLS+ Y+LF+
Sbjct: 626 VYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYA 685
Query: 127 RANQR 131
R + R
Sbjct: 686 RCSPR 690
>gi|50725209|dbj|BAD33960.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|222641732|gb|EEE69864.1| hypothetical protein OsJ_29670 [Oryza sativa Japonica Group]
Length = 940
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PNIL I LKR++ GKI+KA+ F E L LS++M A D P
Sbjct: 580 CKSYERAKKKLTISEAPNILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTA-DDISP 638
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH + SGHY Y+KD G+W+ +DS V +L++VLS+ Y+LF+
Sbjct: 639 VYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYA 698
Query: 127 RANQR 131
R + R
Sbjct: 699 RCSPR 703
>gi|356546765|ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 990
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+SI ++PNIL I LKRF+ GKI+K I F E+L + FM P P
Sbjct: 657 CTSYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFMTGTGDIP-P 715
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W+ +D V + +V+SE YILF++
Sbjct: 716 LYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDIEVQPVLVNQVMSEGAYILFYM 775
Query: 127 RANQRP 132
R+ RP
Sbjct: 776 RSCPRP 781
>gi|356502067|ref|XP_003519843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 938
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 84/142 (59%), Gaps = 8/142 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK V ARK++++L++PNIL I LKRF+ K++K++ F EVL ++ +M ++D P
Sbjct: 597 CKTYVKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLNMAPYM-SGTKDKSP 655
Query: 69 EYKLFGTIVHSGF----SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L+ +VH + SGHY Y+K+ G W+ +DS V L VLSE+ Y+L
Sbjct: 656 LYSLYAVVVHLDLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLL 715
Query: 125 FIRANQRPVSANGTFASNGVKS 146
+ R + +P+ G +SN + S
Sbjct: 716 YARHSPKPL---GLVSSNVISS 734
>gi|222622509|gb|EEE56641.1| hypothetical protein OsJ_06049 [Oryza sativa Japonica Group]
Length = 897
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ A +P P
Sbjct: 535 CSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNP-P 593
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V +L +V+SE Y+LF++
Sbjct: 594 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYM 653
Query: 127 RANQRP 132
R+ RP
Sbjct: 654 RSFPRP 659
>gi|342321481|gb|EGU13414.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 656
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKKLV+A K +I +P +L + LKRF G KI + + E L L +M DP
Sbjct: 323 CKKLVNAEKYFAIEDAPLVLTVHLKRFSPT-GRKITGQLRYPETLHLGPYMSNPKVDP-- 379
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+G I+HSG P SGHY +Y++ + G+W+ ND YVS + + Y+LF++R
Sbjct: 380 SYRLYGIILHSGGGPHSGHYTSYVRSSSGKWHDMNDDYVSSLSHPPLSDRDAYVLFYVR 438
>gi|297609602|ref|NP_001063411.2| Os09g0464400 [Oryza sativa Japonica Group]
gi|255678959|dbj|BAF25325.2| Os09g0464400 [Oryza sativa Japonica Group]
Length = 918
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PNIL I LKR++ GKI+KA+ F E L LS++M A D P
Sbjct: 580 CKSYERAKKKLTISEAPNILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTAD-DISP 638
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH + SGHY Y+KD G+W+ +DS V +L++VLS+ Y+LF+
Sbjct: 639 VYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFYA 698
Query: 127 RANQR 131
R + R
Sbjct: 699 RCSPR 703
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%), Gaps = 4/136 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF---GGKIDKAIAFEEVLVLSSFMCKASQD 65
C+K V A K+ +I ++ N+L I LKRF G KI K + + E L + FM + D
Sbjct: 305 CRKKVLASKRFTIHRASNVLTISLKRFGSCSSSGGRKITKDVGYPEFLDIRPFMSEPKGD 364
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P Y L+ +VHSG+S ++GHY+ Y+K + G+WY ND V S ++ VL+++ Y+LF+
Sbjct: 365 PI-TYGLYAVLVHSGYSCNAGHYFCYVKASNGQWYRMNDHEVHPSNIKVVLNQQAYVLFY 423
Query: 126 IRANQRPVSANGTFAS 141
+R S+ G A+
Sbjct: 424 LRLGSPRKSSAGPMAT 439
>gi|242049526|ref|XP_002462507.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
gi|241925884|gb|EER99028.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
Length = 867
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C A+K+++IL++PNIL I LKR++ G+ K + F E L LS +M + + D P
Sbjct: 539 CNSYERAQKKLTILEAPNILTIALKRYQSGVLGETSKVVKFPEHLNLSQYMSR-TDDSSP 597
Query: 69 EYKLFGTIVHSGFSPD--SGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH S SGHY Y+KD+ G+W+ +D+ V ++Q+VLS+ Y+L +
Sbjct: 598 VYTLYAVVVHHNVSNATVSGHYVCYVKDSQGKWHEMDDNKVKPVSIQKVLSKCAYMLLYA 657
Query: 127 RANQR-PVSANGTFASNGVKSH 147
R + R P A G G SH
Sbjct: 658 RISPRAPTGARGAMLRQGASSH 679
>gi|218190388|gb|EEC72815.1| hypothetical protein OsI_06524 [Oryza sativa Indica Group]
Length = 808
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ A +P P
Sbjct: 460 CSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNP-P 518
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V +L +V+SE Y+LF++
Sbjct: 519 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYM 578
Query: 127 RANQRP 132
R+ RP
Sbjct: 579 RSFPRP 584
>gi|50252264|dbj|BAD28270.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 919
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ A +P P
Sbjct: 571 CSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNP-P 629
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V +L +V+SE Y+LF++
Sbjct: 630 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYM 689
Query: 127 RANQRP 132
R+ RP
Sbjct: 690 RSFPRP 695
>gi|115445271|ref|NP_001046415.1| Os02g0244300 [Oryza sativa Japonica Group]
gi|113535946|dbj|BAF08329.1| Os02g0244300 [Oryza sativa Japonica Group]
Length = 975
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ A +P P
Sbjct: 627 CSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDNP-P 685
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V +L +V+SE Y+LF++
Sbjct: 686 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGAYMLFYM 745
Query: 127 RANQRP 132
R+ RP
Sbjct: 746 RSFPRP 751
>gi|413926008|gb|AFW65940.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 489
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SC V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ + +P
Sbjct: 141 SCAAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKCVTFPDMLDMVPFVTGSGDNP- 199
Query: 68 PEYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P Y L+ +VH + + SGHY +Y+KD G W +DS V V ++ +V+SE Y+LF+
Sbjct: 200 PLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGAYMLFY 259
Query: 126 IRANQRP 132
+R+ RP
Sbjct: 260 MRSFPRP 266
>gi|326432192|gb|EGD77762.1| hypothetical protein PTSG_08851 [Salpingoeca sp. ATCC 50818]
Length = 1156
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK V A KQ++I + PN+L IQLKRF + FG K+ +++ L + F+ ++ +
Sbjct: 296 CKNKVPATKQLTIHRLPNVLCIQLKRFSFMSHFGSKLRHKVSYPMQLNVHEFLSRSIRSR 355
Query: 67 QP----EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 122
Y+L+G +VH G + SGHY AY++ A G WYC +D V S EVL++ Y+
Sbjct: 356 ISRGACRYELYGVLVHLGATLSSGHYIAYVRAANGMWYCADDDDVRFSKENEVLNQAAYM 415
Query: 123 LFFIRANQRP 132
LF+ R + +P
Sbjct: 416 LFYTRTDNKP 425
>gi|413936571|gb|AFW71122.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 821
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ + +P P
Sbjct: 540 CSAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKCVTFPDMLDMVPFVTGSGDNP-P 598
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V V ++ +V+SE Y+LF++
Sbjct: 599 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGAYMLFYL 658
Query: 127 RANQRP 132
R+ RP
Sbjct: 659 RSFPRP 664
>gi|413936572|gb|AFW71123.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 890
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ + +P P
Sbjct: 540 CSAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKCVTFPDMLDMVPFVTGSGDNP-P 598
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V V ++ +V+SE Y+LF++
Sbjct: 599 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGAYMLFYL 658
Query: 127 RANQRP 132
R+ RP
Sbjct: 659 RSFPRP 664
>gi|384495371|gb|EIE85862.1| hypothetical protein RO3G_10572 [Rhizopus delemar RA 99-880]
Length = 493
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 4/122 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE-GIFGG---KIDKAIAFEEVLVLSSFMCKAS 63
+CK+ V A KQM+ + P+ LVI LKRFE ++ KI K++ F E L ++ ++ K
Sbjct: 261 ACKQKVRAYKQMTANEVPHNLVIHLKRFEYDMYSNGMRKIHKSVKFPETLDMAPYISKEK 320
Query: 64 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ EYKL+ +VH+G S D+GHY+AY+K+ G W ND V ++ EVLS++ Y+L
Sbjct: 321 KVQAAEYKLYAVLVHAGSSCDAGHYFAYVKNPQGGWLLINDETVHPVSINEVLSQRAYML 380
Query: 124 FF 125
F+
Sbjct: 381 FY 382
>gi|302765142|ref|XP_002965992.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
gi|300166806|gb|EFJ33412.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
Length = 309
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKK V A K+ +I +PN+L +Q KRF G+ G KIDK + F L ++ FM A
Sbjct: 189 CKKKVRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHFGRKLDITPFMSNARDGA 248
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+G +VH+G+S SGHYY +++ + W+ +DS V + Q VL++K YILF+I
Sbjct: 249 --VYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLNQKAYILFYI 306
Query: 127 R 127
R
Sbjct: 307 R 307
>gi|403413958|emb|CCM00658.1| predicted protein [Fibroporia radiculosa]
Length = 1268
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A KQ ++ +P +L I LKRF I GGKI + + ++E L L S M P
Sbjct: 880 CKKAVTADKQFTVHDAPLVLTIHLKRFSPI-GGKIGQPVKYDERLSLQSVMSSGQHGP-- 936
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ I H+G P+SGHYYA++K + G+WY ND V+ + YILF+IR
Sbjct: 937 SYVLYAVISHAGGGPNSGHYYAHVKGSNGQWYEMNDDSVTRHPGAPTGMKNAYILFYIR 995
>gi|302815104|ref|XP_002989234.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
gi|300142977|gb|EFJ09672.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
Length = 309
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKK V A K+ +I +PN+L +Q KRF G+ G KIDK + F L ++ FM A
Sbjct: 189 CKKKVRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHFGRKLDITPFMSNARDGA 248
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+G +VH+G+S SGHYY +++ + W+ +DS V + Q VL++K YILF+I
Sbjct: 249 --VYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLNQKAYILFYI 306
Query: 127 R 127
R
Sbjct: 307 R 307
>gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa]
gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa]
Length = 1095
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 9/128 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+ A+K+++IL++PN+L I LKRF+ GK++K+I F E+L L+ +M + D P
Sbjct: 743 CRSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYM-SGTSDKSP 801
Query: 69 EYKLFGTIVH-----SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
Y+L+G IVH + F SGHY Y+K+ +W+ +DS V+ L+ VLS+ Y+L
Sbjct: 802 IYRLYGVIVHLDVMNAAF---SGHYVCYVKNIQNKWFKIDDSTVTAVELERVLSKGAYML 858
Query: 124 FFIRANQR 131
+ R + R
Sbjct: 859 LYARCSPR 866
>gi|356497712|ref|XP_003517703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 927
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 105/185 (56%), Gaps = 10/185 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK ARK++++L++PNIL I LKRF+ K++K++ F EVL ++ +M ++D P
Sbjct: 595 CKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLNMAPYM-SGTKDKSP 653
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY Y+K+ G W+ +DS V L VLSE+ Y+L +
Sbjct: 654 LYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSERAYMLLYA 713
Query: 127 RANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
R + +P+ G +SN + S GK + ++ +P + T+ ++ +S ++PS K
Sbjct: 714 RHSPKPL---GLVSSNVISS--AGKFKRRNLEA-IPASS-KTRSNSMATSGESPSLQQKH 766
Query: 187 EKVPS 191
K P+
Sbjct: 767 GKYPN 771
>gi|242064616|ref|XP_002453597.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
gi|241933428|gb|EES06573.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
Length = 966
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 78/126 (61%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ + +P P
Sbjct: 623 CSAYVKARKQLSVHEVPNILTLVLKRFQSGKYGKINKCVTFPDMLDMVPFVTGSGDNP-P 681
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V V ++ +V+SE Y+LF++
Sbjct: 682 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGAYMLFYL 741
Query: 127 RANQRP 132
R+ RP
Sbjct: 742 RSFPRP 747
>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
Length = 1060
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++IL++PN+L I LKRF+ GK++K+I F E+L L+ +M + D P
Sbjct: 708 CKSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYM-SGTSDKSP 766
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G +VH + SGHY Y+K+ +W+ +DS V+ L+ VL++ Y+L +
Sbjct: 767 IYRLYGVVVHLDIMNASFSGHYVCYVKNVQNKWFKIDDSTVTAVELERVLTKGAYMLLYA 826
Query: 127 RANQR 131
R + R
Sbjct: 827 RCSPR 831
>gi|356518197|ref|XP_003527768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 734
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK V A K++++ ++PNIL I LKRF+ GK++K + F E L LS +M +A D
Sbjct: 356 CKGYVKAWKRLTVKRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSEAG-DGSD 414
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ +VH S GHY +IKD G WY +D VS L+EVLS+ Y+L +
Sbjct: 415 IYKLYAVVVHIDMLNASFFGHYICFIKDLCGNWYRIDDWKVSSVELEEVLSQGAYMLLYS 474
Query: 127 RANQRP 132
R N RP
Sbjct: 475 RVNARP 480
>gi|169861600|ref|XP_001837434.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
gi|116501455|gb|EAU84350.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
Length = 637
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 10/142 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A K+ +I +P +L + LKRF + G KI + +++ L L FM + S P
Sbjct: 305 CKKPVTAEKRFTIHDAPLVLTVHLKRFSPL-GRKIGHPVTYDDHLSLQPFMSEGSFGPT- 362
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+G I H+G P SGHYYA++K G+W+ ND VS + + Y+LF++R
Sbjct: 363 -YSLYGVICHAGGGPHSGHYYAFVKSRDGKWWEMNDEMVSPINGPPLSKKSAYVLFYMR- 420
Query: 129 NQRPVSANGTFASNGVKSHENG 150
A G VKS NG
Sbjct: 421 ------AKGQGLEGAVKSQING 436
>gi|393216033|gb|EJD01524.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 775
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V+A KQ +I ++P +L + LKRF + G K+ I ++EVL L M + P
Sbjct: 362 CKRPVNAEKQFTIHEAPAVLTVHLKRFTPM-GRKLQHPIRYDEVLSLQPAMSEGQHGPT- 419
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK-VYILFFIR 127
YKL+G I H G P+SGHY+A+++ G+WY ND V E L+ K Y+LF+IR
Sbjct: 420 -YKLYGVISHMGGGPNSGHYFAHVRGGDGQWYEMNDDSVERVHKPEPLNMKNAYMLFYIR 478
Query: 128 ANQRPVSA--NGTFASNGVKSHENGKE 152
++A +G NG+ + KE
Sbjct: 479 QKGEALAAAVHGGGFVNGISLSKKRKE 505
>gi|392592963|gb|EIW82289.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 503
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ ++P +L I LKRF + G KI I ++E L L M + S P
Sbjct: 140 CKKPVVAEKKFNVHEAPVVLTIHLKRFSPL-GRKIGHFIHYDEHLALQPAMSEGSFGPS- 197
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G I H+G P+SGHYYAYIK A G+WY ND V+ S + V + YILF++R
Sbjct: 198 -YTLYGVICHAGGGPNSGHYYAYIKSANGQWYEMNDDMVAPSKV-AVGVKNAYILFYMR 254
>gi|389744531|gb|EIM85714.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 766
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ V A K+ +I ++P +L I LKRF + G KI AI ++E L L+ +M + P
Sbjct: 323 ACKRRVVAEKRFTIHEAPVVLTIHLKRFSPL-GRKIGHAIKYDEKLTLAPYMSEGQFGP- 380
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTL---QEVLSEKVYILF 124
Y L+G I H+G P+SGHYYA+++ G WY ND V+ + + Y+LF
Sbjct: 381 -SYALYGVISHAGGGPNSGHYYAHVRGPNGSWYEMNDETVTPAGMGGEAPTGLRSAYMLF 439
Query: 125 FI----RANQRPVSANGTFASNGVKSHENGKEAYKGVKG 159
++ +A Q V NG A +H NG V G
Sbjct: 440 YVMEKGQALQAAVGMNGAGAYVNGNAHSNGHGQNGAVNG 478
>gi|414869933|tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 973
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PNIL I LKR++ GKI KAI F E L L+ +M + D P
Sbjct: 645 CKSYERAKKKLTIEEAPNILTIALKRYQSGKFGKISKAIRFPETLNLARYMNPDTDDISP 704
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY Y+KD G+W+ +DS V +L V+S+ Y+L +
Sbjct: 705 VYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAYMLLYA 764
Query: 127 RANQRPVSA 135
R + R S+
Sbjct: 765 RCSPRAPSS 773
>gi|328868712|gb|EGG17090.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 857
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 3/121 (2%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 71
LV A K+M++ +P+IL IQLKRF G K ++ I +E L LS +M +++D Y
Sbjct: 476 LVRASKRMTVHVAPSILTIQLKRF-NYNGSKSNRQIQYESTLDLSPYMSNSTKDA--VYD 532
Query: 72 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQR 131
L+G +VHSG S +SGHYY Y+K + W+ ND++VS L ++ YILF+ R
Sbjct: 533 LYGVLVHSGGSTNSGHYYCYVKGSTNLWHNMNDNFVSSVNQPTALGQRAYILFYSRRVNS 592
Query: 132 P 132
P
Sbjct: 593 P 593
>gi|357153956|ref|XP_003576621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like
[Brachypodium distachyon]
Length = 959
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C A+K+++I ++PNIL I LKR++ GKI+KAI+F E L LSS+M + D P
Sbjct: 607 CNSYERAKKKLTIYEAPNILTIALKRYQTGSSGKINKAISFPECLNLSSYM-STTNDYSP 665
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH + SGHY Y+KD+ +W+ +D V +L++VL++ Y+LF+
Sbjct: 666 VYRLYAVVVHHDVQNAAFSGHYVCYVKDSHEKWHEMDDRQVKSVSLEKVLTKCAYMLFYA 725
Query: 127 RANQR 131
R + R
Sbjct: 726 RCSPR 730
>gi|356554161|ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 729
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 16/230 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK V A K++++ +PNIL I LKRF+ GK++K I+F E L LS +M +A D
Sbjct: 369 CKDYVKAWKRLTVKCAPNILTIALKRFQSGRFGKLNKRISFPETLNLSPYMSEAG-DGSD 427
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+G +VH S GHY YIKD G WY +D V ++EVLS+ Y+L +
Sbjct: 428 IYKLYGVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMTVEVEEVLSQGAYMLLYS 487
Query: 127 RANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKV 186
R + RP +G++ + V+ V ++ T+ S+ K +
Sbjct: 488 RCSARP---------SGLQIQTSESSGIAEVQTEVEVEPGQTEQDECLSNMKALTCSRGS 538
Query: 187 EKVPSNPRLKFSISGSSGCKGVP----PTSNGKVNVHKSQSVKMNGVVKD 232
E +PS+ + +S S C+ P + N V G+V +
Sbjct: 539 EVLPSDVSPELKVSSSYDCESFAGLNSPVKREQFNDVDMMDVDSTGIVNE 588
>gi|356551761|ref|XP_003544242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1045
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+M++ ++PN+L I LKRF+ GK++K I F E+L L+ FM S P
Sbjct: 692 CKSYEKAKKKMTVSEAPNVLTIALKRFQSGKFGKLNKPIRFPEILDLAPFMSGTSD--LP 749
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G +VH + SGHY Y+K+ RW+ +DS V+ L+ VL++ Y+LF+
Sbjct: 750 IYRLYGVVVHLDIMNAAFSGHYVCYVKNFQSRWFKVDDSVVTAVELESVLAKGAYMLFYA 809
Query: 127 RANQR 131
R + R
Sbjct: 810 RCSPR 814
>gi|326510035|dbj|BAJ87234.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 979
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F ++L + F+ A P P
Sbjct: 629 CCAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLDMVPFVTGAGDHP-P 687
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V +L +V+SE Y+LF++
Sbjct: 688 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSLNQVMSEGAYMLFYL 747
Query: 127 RANQRP 132
R+ RP
Sbjct: 748 RSFPRP 753
>gi|359495422|ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 997
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ+++ ++P +L I LKRF G KIDK + F + L F+ S +
Sbjct: 292 CKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFV-SGSYEEN 350
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G+S SGHYY +++ + G WY +D+ V + + VL +K Y+LF++R
Sbjct: 351 LKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 410
>gi|15238468|ref|NP_201348.1| ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana]
gi|75262625|sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName:
Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
gi|9759625|dbj|BAB11567.1| unnamed protein product [Arabidopsis thaliana]
gi|332010675|gb|AED98058.1| ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana]
Length = 731
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++ IL+ PNIL + LKRF+ GK+ K I F E+L +S +M + P
Sbjct: 512 CKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDISPYMSDPNHGDHP 571
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY YIK G W+ +DS V L+ VL E Y+L +
Sbjct: 572 VYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLLEGAYMLLYA 631
Query: 127 RANQRPVSANG 137
R + RPVS NG
Sbjct: 632 RDSPRPVSKNG 642
>gi|147832340|emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]
Length = 918
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ+++ ++P +L I LKRF G KIDK + F + L F+ S +
Sbjct: 256 CKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFVS-GSYEEN 314
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G+S SGHYY +++ + G WY +D+ V + + VL +K Y+LF++R
Sbjct: 315 LKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 374
>gi|225461822|ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 955
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ+++ ++P +L I LKRF G KIDK + F + L F+ S +
Sbjct: 293 CKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFV-SGSYEEN 351
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G+S SGHYY +++ + G WY +D+ V + + VL +K Y+LF++R
Sbjct: 352 LKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 411
>gi|302142802|emb|CBI20097.3| unnamed protein product [Vitis vinifera]
Length = 915
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ+++ ++P +L I LKRF G KIDK + F + L F+ S +
Sbjct: 293 CKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFV-SGSYEEN 351
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G+S SGHYY +++ + G WY +D+ V + + VL +K Y+LF++R
Sbjct: 352 LKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 411
>gi|356510092|ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1063
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++++ ++PN+L + LKRF+ GK++K I F E+L L+ FM + D P
Sbjct: 788 CKSYEKAKKKLTVSEAPNVLTVALKRFQSGKFGKLNKPIQFPEILNLAPFM-SGTSDKSP 846
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G +VH + SGHY Y+K+ +W+ +DS V+ L VL++ Y+LF+
Sbjct: 847 IYRLYGVVVHLDIMNAAFSGHYVCYVKNIQNKWFKVDDSVVTAVELDRVLTKGAYMLFYA 906
Query: 127 RANQR 131
R + R
Sbjct: 907 RCSPR 911
>gi|194700188|gb|ACF84178.1| unknown [Zea mays]
gi|414869931|tpg|DAA48488.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 370
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 4 LCLFS-CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA 62
L +S CK A+K+++I ++PNIL I LKR++ GKI KAI F E L L+ +M
Sbjct: 36 LVFYSRCKSYERAKKKLTIEEAPNILTIALKRYQSGKFGKISKAIRFPETLNLARYMNPD 95
Query: 63 SQDPQPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 120
+ D P Y L+ +VH + SGHY Y+KD G+W+ +DS V +L V+S+
Sbjct: 96 TDDISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCA 155
Query: 121 YILFFIRANQRPVSA 135
Y+L + R + R S+
Sbjct: 156 YMLLYARCSPRAPSS 170
>gi|356564905|ref|XP_003550687.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 903
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI-FGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ++I ++P +L I LKRF G KI K + F L L F+ S D
Sbjct: 283 CKQKVKALKQLTIHKAPYVLTIHLKRFHAHDTGQKIKKKVQFGCALDLKPFV-SGSNDGD 341
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G S SGHYY Y++ + WY +D+ VS + +EVL+++ Y+LF++R
Sbjct: 342 VKYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLFYVR 401
>gi|297794145|ref|XP_002864957.1| hypothetical protein ARALYDRAFT_332761 [Arabidopsis lyrata subsp.
lyrata]
gi|297310792|gb|EFH41216.1| hypothetical protein ARALYDRAFT_332761 [Arabidopsis lyrata subsp.
lyrata]
Length = 731
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 2/131 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++ IL+ PNIL + LKRF+ GK+ K I F E+L + +M + P
Sbjct: 512 CKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDIGPYMSDPNHGDHP 571
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY YIK G W+ +DS V L+ VL E Y+L +
Sbjct: 572 VYSLYAVVVHLDAMSTSFSGHYVCYIKTLHGDWFKIDDSNVFRVQLETVLLEGAYMLLYA 631
Query: 127 RANQRPVSANG 137
R + RPVS NG
Sbjct: 632 RNSPRPVSKNG 642
>gi|413952907|gb|AFW85556.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 903
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C++ V A+K+++I ++PN+L I LKRF KIDK + F+ +L L F+ S+
Sbjct: 275 CRQKVVAKKRLTIDKAPNVLTIHLKRFSPFNPREKIDKKVDFQSILDLKPFVSD-SKGTD 333
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G+S SGHYY Y++ + G W+ +D V +VL +K Y+LF++R
Sbjct: 334 FKYSLYGVLVHTGWSTQSGHYYCYVRTSSGMWHNLDDKEVRQVREADVLKQKAYMLFYVR 393
>gi|224056573|ref|XP_002298917.1| predicted protein [Populus trichocarpa]
gi|222846175|gb|EEE83722.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+SI ++PNIL I LKRF+ GKI+K I F ++L + FM P P
Sbjct: 537 CAAYVRARKQLSIHEAPNILTIVLKRFQEGKYGKINKCITFPDMLDMIPFMTGMGDVP-P 595
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY AY+KD G W+ +D+ V ++ +V+ E YILF+
Sbjct: 596 LYMLYAVVVHLDTLNASFSGHYVAYVKDLRGSWFKIDDTEVHPVSMSQVMLEGAYILFYK 655
Query: 127 RANQRP 132
R+ RP
Sbjct: 656 RSCTRP 661
>gi|14994718|gb|AAK77003.1| deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY++Y+K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 290 -YALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|112983634|ref|NP_001001559.2| deubiquitinating enzyme 2a [Mus musculus]
gi|148684706|gb|EDL16653.1| mCG124600 [Mus musculus]
gi|148922521|gb|AAI46299.1| Deubiquitinating enzyme 2a [synthetic construct]
gi|151555365|gb|AAI48744.1| Deubiquitinating enzyme 2a [synthetic construct]
Length = 545
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY++Y+K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 290 -YALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|308809419|ref|XP_003082019.1| probable ubiquitin carboxyl terminal hydrolase (ISS) [Ostreococcus
tauri]
gi|116060486|emb|CAL55822.1| probable ubiquitin carboxyl terminal hydrolase (ISS) [Ostreococcus
tauri]
Length = 580
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS--QDP 66
CK LV A+K I SPNIL I LKR+ KI K + + L FM + ++
Sbjct: 269 CKALVRAKKGTKIHVSPNILTIPLKRYSTGRFSKITKYVTYPATFSLVEFMSDDAPYEES 328
Query: 67 QPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
PEY+LFG +VH F S +GHY AY+K W CND+ +S S+ +E + +K YILF
Sbjct: 329 APEYELFGVLVHQDFYASAHAGHYVAYVKLRDDSWVLCNDNRISPSSEKEAMKQKAYILF 388
Query: 125 FIRANQR 131
+ R+ R
Sbjct: 389 YERSRAR 395
>gi|330822504|ref|XP_003291691.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
gi|325078127|gb|EGC31796.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
Length = 536
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKKLV A K + I SP IL +Q+KRF + +GGK +K I F + L LS +M + +
Sbjct: 299 CKKLVKAEKSLQIEISPPILTVQIKRFSFLDSYGGKDNKHIQFGQTLDLSPYMTQT--ND 356
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y L+ +VH G S +SGHYY Y+K G WY +DS VS +L+ VL K Y+LF+
Sbjct: 357 HSIYDLYAVLVHLGDSTNSGHYYCYVKGTNGVWYKMDDSMVSQVSLKSVLRSKAYMLFY 415
>gi|359495665|ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
vinifera]
Length = 942
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 9/164 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+ A+K++ +L++PNIL I LKRF+ GK++K++ F E L L+ +M + D P
Sbjct: 580 CRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNLTPYM-SGTDDRYP 638
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY ++K+ +G W+ +DS V+ L VL E Y+L +
Sbjct: 639 VYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGAYMLLYA 698
Query: 127 RANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKP 170
R + +P + + N SHE GK + ++ VP ATKP
Sbjct: 699 RRSPKPPA----LSRNMAVSHE-GKLKMRNLEA-VPSSLAATKP 736
>gi|147857493|emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]
Length = 1142
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ+++ ++P +L I LKRF G KIDK + F + L F+ S +
Sbjct: 476 CKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFV-SGSYEEN 534
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G+S SGHYY +++ + G WY +D+ V + + VL +K Y+LF++R
Sbjct: 535 LKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 594
>gi|357140850|ref|XP_003571975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Brachypodium distachyon]
Length = 971
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+S+ + PNIL + LKRF+ GKI+K + F E+L + F+ A P P
Sbjct: 621 CCAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPEMLDMVPFVTGAGDHP-P 679
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY +Y+KD G W +DS V + +V+SE Y+LF++
Sbjct: 680 LYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSPNQVMSEGAYMLFYL 739
Query: 127 RANQRP 132
R+ RP
Sbjct: 740 RSFPRP 745
>gi|356498762|ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 879
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ++I ++P +L I LKRF G KI K I F L L F+ S D
Sbjct: 280 CKQKVRALKQLTIHKAPYVLTIHLKRFHAHDPGQKIKKKIQFGCALDLKPFV-SGSYDGD 338
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G S SGHYY Y++ + WY +D+ VS + +EVL+++ Y+LF++R
Sbjct: 339 VKYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLFYVR 398
>gi|194697876|gb|ACF83022.1| unknown [Zea mays]
Length = 495
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PNIL I LKR++ GKI KAI F E L L+ +M + D P
Sbjct: 167 CKSYERAKKKLTIEEAPNILTIALKRYQSGKFGKISKAIRFPETLNLARYMNPDTDDISP 226
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY Y+KD G+W+ +DS V +L V+S+ Y+L +
Sbjct: 227 VYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAYMLLYA 286
Query: 127 RANQRPVSA 135
R + R S+
Sbjct: 287 RCSPRAPSS 295
>gi|320165971|gb|EFW42870.1| DUB1 [Capsaspora owczarzaki ATCC 30864]
Length = 495
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK+ V+A KQ SI ++PN+L + LKRF+ + KI++ I F+E L LS FM K
Sbjct: 388 CKRKVTATKQTSIHRAPNVLSLHLKRFDFLRSHNAKINRPIRFDEELDLSPFMSKGLPQQ 447
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV 109
Y+L+ +VH+G S SGHYY Y++++ +WY NDS+VS+
Sbjct: 448 NLRYRLYAVLVHAGHSCHSGHYYCYVRNSDNQWYEMNDSHVSI 490
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 73/119 (61%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHIHSAPKVLLLVLKRFSASMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY++Y+K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 290 -YALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|167527243|ref|XP_001747954.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773703|gb|EDQ87341.1| predicted protein [Monosiga brevicollis MX1]
Length = 1846
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-Q 67
C +LV A KQ+S+ ++PN+L IQLKRF G+ID+ I + L L ++M D +
Sbjct: 382 CDQLVRAHKQLSLYEAPNVLAIQLKRFRAGAHGRIDRFIQYPHQLNLKNYMTPGHHDDGK 441
Query: 68 PEYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
EY+L G I+H G GHY + +K G W CND+Y SV +++ Y+LF+
Sbjct: 442 MEYELCGIIIHLTVGNLTTFGHYVSVVKQGSGDWLLCNDTYTSVLAKEDIEKTTPYMLFY 501
Query: 126 IRANQRPVSANGTFASNGVK-------------SHENGKEAYKGVKGTVPLKAVATKPSA 172
R RP+ + A+ K + E G K K P++ A K +A
Sbjct: 502 KRREFRPLPTDVDPAAAQEKEKGKCKSGCGFFGAAEYGGHCSKCFKALSPVEQDACKQAA 561
Query: 173 --EQSSRKTPSTIS-----KVEKVPSNPRLKF 197
+ + P+ +S + EK P N K+
Sbjct: 562 VVDAAQPNEPAAVSSRKVGRNEKCPCNSGRKY 593
>gi|296088835|emb|CBI38293.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A KQ+++ ++P +L I LKRF G KIDK + F + L F+ S +
Sbjct: 292 CKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFV-SGSYEEN 350
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G+S SGHYY +++ + G WY +D+ V + + VL +K Y+LF++R
Sbjct: 351 LKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFYVR 410
>gi|356563968|ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 735
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK V A K++++ +PNIL I LKRF+ GK++K IAF E L LS +M +A D
Sbjct: 370 CKDYVKAWKRLTVKCAPNILTIALKRFQSGRFGKLNKRIAFPETLNLSPYMSEAG-DGSD 428
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+G +VH S GHY YIKD G WY +D V ++EVLS+ Y+L +
Sbjct: 429 IYKLYGVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMTVEVEEVLSQGAYMLLYS 488
Query: 127 RANQRPVS 134
R + R S
Sbjct: 489 RCSARTSS 496
>gi|356518408|ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1125
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++++ ++PN+L + LKRF+ GK++K I F E+L L+ FM + D P
Sbjct: 785 CKSYEKAKKKLTVSEAPNVLTVALKRFQSGKFGKLNKPIQFPEILNLAPFM-SGTSDKSP 843
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G +VH + SGHY Y+K+ +W +DS V+ L VL++ YILF+
Sbjct: 844 IYRLYGVVVHLDVMNASFSGHYVCYVKNIQNKWSKVDDSVVTAVELDRVLTKGAYILFYA 903
Query: 127 RANQR 131
R + R
Sbjct: 904 RCSPR 908
>gi|297796717|ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
gi|297312078|gb|EFH42502.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V ARKQ+++ ++P +L I LKRFE KID+ + F + + F+ +
Sbjct: 292 CKQKVKARKQLTVSKAPYVLTIHLKRFEAHRSEKIDRKVDFASAIDMKPFV-SGPHEGNL 350
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
+Y L+G +VH G S SGHY +++ + G WY +D+ V + + V ++K Y+LF++R
Sbjct: 351 KYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVLQVSEKTVFNQKAYMLFYVRD 410
Query: 129 NQRPVSANGTFASNGVKSHENGKEAY 154
+ V N S V E KE++
Sbjct: 411 RRNAVPKN----SVPVVKKETSKESF 432
>gi|224084576|ref|XP_002307344.1| predicted protein [Populus trichocarpa]
gi|222856793|gb|EEE94340.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+M+IL++PN+L I LKRF+ GK++K+I F E+L L+ +M + D P
Sbjct: 206 CKSYEKAKKKMTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYM-SGTSDKSP 264
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G IVH + SGHY Y+K+ +W+ +DS V+ L+ VLS+ Y+L +
Sbjct: 265 IYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLSKGAYMLLYA 324
Query: 127 R 127
R
Sbjct: 325 R 325
>gi|449061956|sp|C9J2P7.1|U17LF_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
15
Length = 530
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KIDK + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPECLDMKLYMSQTNSGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|11993486|gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
Length = 859
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 23/179 (12%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V A+KQ+++ ++P +L + LKRFE KID+ + F + + F+ +
Sbjct: 292 CKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFV-SGPHEGNL 350
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
+Y L+G +VH G S SGHY +++ + G WY +D+ V + + V ++K Y+LF++R
Sbjct: 351 KYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVRD 410
Query: 129 NQRPVSANG-------TFASN--------GVKSHENGKEAYKG-------VKGTVPLKA 165
Q V N +FA+N +K NG K G PLK+
Sbjct: 411 RQNAVPKNSVPVVKKESFATNRASLIVASNIKDQVNGSTVIKECGFGALVANGLAPLKS 469
>gi|378925632|ref|NP_001243782.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 12 [Homo
sapiens]
gi|449061964|sp|C9JPN9.1|UL17C_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
12
Length = 530
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++L S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|19075305|ref|NP_587805.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe
972h-]
gi|74626856|sp|O74442.1|UBP16_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 16;
AltName: Full=Deubiquitinating enzyme 16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|3560166|emb|CAA20678.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe]
Length = 457
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 74/124 (59%), Gaps = 8/124 (6%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK+LV A KQM+I ++PNIL I KRF G KI K I++ E L +M D
Sbjct: 309 NCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGPYM----SD 364
Query: 66 PQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y+L G +VH+G S SGHYY++ K + G W +D +VS S++ VL+++ YIL
Sbjct: 365 PNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYIL 424
Query: 124 FFIR 127
+ R
Sbjct: 425 QYKR 428
>gi|357465295|ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1116
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 77/125 (61%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++++ ++PNIL + LKRF+ GK++K + F E+L L+ F+ S D P
Sbjct: 769 CKSYQKAKKKLTVSEAPNILTVALKRFQSGKFGKLNKPVQFPEILDLAPFVSGTS-DKTP 827
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+G +VH + SGHY Y+K+ +W+ +DS V+ L+ VL++ Y+LF+
Sbjct: 828 IYRLYGVVVHLDVMNASFSGHYVCYLKNIQNKWFKVDDSVVTAVELERVLTKGAYMLFYA 887
Query: 127 RANQR 131
R + R
Sbjct: 888 RCSPR 892
>gi|379030606|ref|NP_001243791.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 21 [Homo
sapiens]
gi|449061961|sp|D6R901.1|U17LL_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
21
Length = 530
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++L S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|328766417|gb|EGF76471.1| hypothetical protein BATDEDRAFT_28405 [Batrachochytrium
dendrobatidis JAM81]
Length = 525
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 5/122 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI---FGGKIDKAIAFEEVLVLSSFMCKASQD 65
C L A KQ+++L+ P +L +QLKRF G G KI + F+ VL L FM ++++
Sbjct: 267 CNALRDAYKQITVLEPPVVLTVQLKRF-GFGHRVGSKISSPVLFKTVLNLYPFMSQSTKQ 325
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y LF +VHSG S SGHYY ++K G WY NDS V + + VL++ Y+LF+
Sbjct: 326 -NVLYHLFAVLVHSGGSCHSGHYYCFVKAPDGCWYLMNDSLVQQVSEKTVLAQSAYMLFY 384
Query: 126 IR 127
+R
Sbjct: 385 VR 386
>gi|242081757|ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
gi|241941997|gb|EES15142.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
Length = 998
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PN+L I LKR++ GKI KAI F + L + +M + D P
Sbjct: 650 CKSYERAKKKLTIEEAPNVLTIALKRYQSGKFGKISKAIRFPDTLNMGHYMNPDTDDISP 709
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY Y+KD G+W+ +DS V +L V+S+ Y+L +
Sbjct: 710 VYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAYMLLYA 769
Query: 127 RANQRPVSA 135
R + R S+
Sbjct: 770 RCSPRAPSS 778
>gi|379643059|ref|NP_001243823.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 15 [Homo
sapiens]
Length = 559
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KIDK + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPECLDMKLYMSQTNSGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|2739431|gb|AAB95194.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY++Y+K G WY +D+ V+ + VL+E Y+LF+++
Sbjct: 290 -YALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|9758368|dbj|BAB08869.1| unnamed protein product [Arabidopsis thaliana]
Length = 829
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 79/141 (56%), Gaps = 8/141 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V A+KQ+++ ++P +L + LKRFE KID+ + F + + F+ +
Sbjct: 262 CKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFV-SGPHEGNL 320
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
+Y L+G +VH G S SGHY +++ + G WY +D+ V + + V ++K Y+LF++R
Sbjct: 321 KYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVRD 380
Query: 129 NQRPVSANG-------TFASN 142
Q V N +FA+N
Sbjct: 381 RQNAVPKNSVPVVKKESFATN 401
>gi|18424054|ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
Full=Ubiquitin thioesterase 23; AltName:
Full=Ubiquitin-specific-processing protease 23
gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
Length = 859
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 23/179 (12%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V A+KQ+++ ++P +L + LKRFE KID+ + F + + F+ +
Sbjct: 292 CKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFV-SGPHEGNL 350
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
+Y L+G +VH G S SGHY +++ + G WY +D+ V + + V ++K Y+LF++R
Sbjct: 351 KYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFYVRD 410
Query: 129 NQRPVSANG-------TFASN--------GVKSHENGKEAYKG-------VKGTVPLKA 165
Q V N +FA+N +K NG K G PLK+
Sbjct: 411 RQNAVPKNSVPVVKKESFATNRASLIVASNIKDQVNGSTVIKECGFGALVANGLAPLKS 469
>gi|2739433|gb|AAB94636.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY++Y+K G WY +D+ V+ + VL+E Y+LF+++
Sbjct: 290 -YALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|119964688|ref|NP_034219.3| deubiquitinating enzyme 2 [Mus musculus]
gi|148684713|gb|EDL16660.1| mCG122921 [Mus musculus]
gi|157169780|gb|AAI52900.1| Deubiquitinating enzyme 2 [synthetic construct]
Length = 545
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + I +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY++Y+K G WY +D+ V+ + VL+E Y+LF+++
Sbjct: 290 -YALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|168015744|ref|XP_001760410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688424|gb|EDQ74801.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 10/126 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM-----CK 61
C K V A KQ +I + PNIL IQ KRF G GGKIDK I F L L ++ C
Sbjct: 184 CNKKVRALKQFTIDKPPNILTIQFKRFSSTGSSGGKIDKKIEFGRTLDLKPYISNPQVCS 243
Query: 62 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
A+ +Y L+ +VH+G+S SGHYY +++ W+ +DS V + + VL +K Y
Sbjct: 244 ATD---AKYSLYAVLVHAGWSTHSGHYYCFVRTKGDMWHALDDSRVKQVSEKSVLDQKAY 300
Query: 122 ILFFIR 127
ILF+IR
Sbjct: 301 ILFYIR 306
>gi|33333160|gb|AAQ11741.1| deubiquitinating enzyme DUB1 [Homo sapiens]
Length = 530
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 77/122 (63%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + SA K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRASASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|224116680|ref|XP_002317364.1| predicted protein [Populus trichocarpa]
gi|222860429|gb|EEE97976.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+SI ++PNIL I LKRF+ GKI+K I F ++L + FM + D P
Sbjct: 567 CAAYVRARKQLSIHEAPNILTIVLKRFQEGKYGKINKCITFPDMLDMIPFM-TGTGDVPP 625
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + + SGHY AY+KD G W+ +D+ V ++ +V+ E YILF+
Sbjct: 626 LYMLYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTEVHPVSMSQVMLEGAYILFYT 685
Query: 127 RANQRPVSANGTFASNG--VKSHENGKEAYKGVKGTVPLKAVATKPSAEQS 175
P ++ NG + S+ NG K T + + S+++S
Sbjct: 686 SHFVGPEASLDVKPENGSSLASYANGIPRSSANKNTTQVMDFSDATSSDRS 736
>gi|331232103|ref|XP_003328714.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307704|gb|EFP84295.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 690
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK L A+K MS+ +P IL + LKRF G KI+K + FE+ L L M S
Sbjct: 372 CKCLRDAKKSMSVFSAPPILTLHLKRF-NFRGRKINKRVNFEDSLDLKPAMSNESDIT-- 428
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV-SVSTLQEVLS-EKVYILFFI 126
YKL+ + H G S SGHYYA++K + G+WY +DS V S+S + VL+ E YILF+
Sbjct: 429 GYKLYAVVCHRGQSNKSGHYYAHVKASNGKWYVADDSTVESISDSRTVLANEHAYILFYA 488
Query: 127 RANQRPVSA 135
R + +SA
Sbjct: 489 RDRESLLSA 497
>gi|294881607|ref|XP_002769432.1| ubiquitin specific protease 66, putative [Perkinsus marinus ATCC
50983]
gi|239872841|gb|EER02150.1| ubiquitin specific protease 66, putative [Perkinsus marinus ATCC
50983]
Length = 755
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF-EGIFGGKIDK---AIAFEEVLVLSSFMCK--- 61
CK+ V+A+K + +P L + LKR+ G FGG+ K + +E+ L LS F+
Sbjct: 288 CKRTVTAKKSTRLYDAPMNLTLSLKRYCYGRFGGRRQKDGHYVKYEKELDLSKFIADHRA 347
Query: 62 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
++ +Y L G +VHSG +P GHYYA++++ G WYCC+D V+ + VLS++ Y
Sbjct: 348 STPGVSNKYILSGVLVHSGATPQLGHYYAFVRNPAGFWYCCDDESVTPAKEHTVLSQQAY 407
Query: 122 ILFFIR 127
ILF+ R
Sbjct: 408 ILFYER 413
>gi|348560035|ref|XP_003465820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 435
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C +V A K +SI + N+L + LKRF G KI K + + E L + ++M + S +
Sbjct: 243 CNSMVPASKSLSIHRPSNVLTLSLKRFSNCTGSKIAKIVKYPEHLNIRAYMSQPSGEAM- 301
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+ +VH+G GHY++Y+K + G WY ND VS S + VLS++ YILF+IR
Sbjct: 302 QYSLYAVLVHTGSKCCVGHYFSYVKASNGLWYQMNDFMVSPSDISSVLSQQAYILFYIR 360
>gi|255584453|ref|XP_002532957.1| conserved hypothetical protein [Ricinus communis]
gi|223527267|gb|EEF29423.1| conserved hypothetical protein [Ricinus communis]
Length = 834
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 7/131 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A+K++++ +PN+L I LKRF G K+DK + F+ L + F+ S +
Sbjct: 192 CKQKVRAKKRLTVHNAPNVLTIHLKRFHAHDPGRKVDKKVLFDHSLDMKPFV-SGSYEGD 250
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH G S SGHY +I+ + G W+ ND+ V + + VL +K Y+LF++R
Sbjct: 251 LKYSLYGVLVHFGHSTHSGHYVCFIRTSSGIWHLLNDNEVRPVSEKVVLDQKAYMLFYVR 310
Query: 128 -----ANQRPV 133
A +RP
Sbjct: 311 DRKANATKRPA 321
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis thaliana]
gi|330252514|gb|AEC07608.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 502
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K++SI +PNIL I LKRF+G GK++K I+F E L +M +
Sbjct: 190 CDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDV 249
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ IVH S GHY Y+KD G WY +DS V L++VLS++ Y+L +
Sbjct: 250 -YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYS 308
Query: 127 RANQRP 132
R RP
Sbjct: 309 RVQPRP 314
>gi|449486818|ref|XP_004157412.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I Q+PNIL I LKRF+ GK++K +AF E L LS +M +A D +
Sbjct: 374 CNDYVKASKRLTIKQAPNILTIALKRFQSGRFGKLNKKVAFPETLDLSPYMSEAG-DRKD 432
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH S GHY YIKD G WY +D V L+EVLS+ Y++ +
Sbjct: 433 VYRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLEEVLSQGAYMILYS 492
Query: 127 RANQRPVS 134
R R S
Sbjct: 493 RVRPRSSS 500
>gi|449447371|ref|XP_004141442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I Q+PNIL I LKRF+ GK++K +AF E L LS +M +A D +
Sbjct: 374 CNDYVKASKRLTIKQAPNILTIALKRFQSGRFGKLNKKVAFPETLDLSPYMSEAG-DRKD 432
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH S GHY YIKD G WY +D V L+EVLS+ Y++ +
Sbjct: 433 VYRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLEEVLSQGAYMILYS 492
Query: 127 RANQRPVS 134
R R S
Sbjct: 493 RVRPRSSS 500
>gi|32402146|gb|AAP81046.1| deubiquitinating enzyme 1A [Mus musculus]
Length = 465
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ A K + + +P +L++ LKRF G G K+D+ +++ E L L ++ + + P P
Sbjct: 229 CRQKKPASKTLKLYSAPKVLMLVLKRFSGSMGKKLDRKVSYPEFLDLKPYLSQPTGGPLP 288
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 289 -YALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQQ 347
Query: 129 N 129
N
Sbjct: 348 N 348
>gi|357143373|ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like
[Brachypodium distachyon]
Length = 1051
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C++ V+A+K+ +I ++P++L I LKRF KIDK + F+ L L F+ S+D
Sbjct: 267 CRQKVAAKKRFTIDKAPDVLTIHLKRFSPFNPRHKIDKKVDFQPTLDLKPFVSN-SEDMD 325
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G +VH+G++ +GHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 326 FRYNLYGVLVHAGWNTQAGHYYCFVRTSSGMWHNLDDNQVHQVREADVLRQKAYMLFYVR 385
Query: 128 ANQRPVSANGTFASNGVKSH 147
V ++ F NG ++
Sbjct: 386 DR---VRSSVIFKDNGAANY 402
>gi|313234290|emb|CBY10357.1| unnamed protein product [Oikopleura dioica]
Length = 742
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK A K+ +I + PN+L I LKRF + G K + I F L +S + + D
Sbjct: 321 CKKATRAAKRFTIHRPPNVLAISLKRF-NMMGNKNGREIRFSSKLDISKYCSYSKMDN-- 377
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y+L+ +VH+GF+ +SGHYY+Y + + G W +DS V+ ++L+ VL ++ Y+L+++R
Sbjct: 378 NYELYAILVHAGFTVNSGHYYSYCRTSKGTWSRFDDSCVTPTSLENVLRQQPYMLYYVRT 437
Query: 129 N 129
+
Sbjct: 438 D 438
>gi|51971603|dbj|BAD44466.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I ++PNIL I LKR++G GK++K I+F E L L+ +M + D
Sbjct: 354 CSDYVKACKRLTIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNPYMSEGG-DGSD 412
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ IVH S GHY YIKD G WY +DS + L++VLS++ Y+L +
Sbjct: 413 VYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYS 472
Query: 127 RANQRPVSA 135
R R S+
Sbjct: 473 RIQARSSSS 481
>gi|15236036|ref|NP_194895.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
gi|166201351|sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName:
Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName:
Full=Ubiquitin thioesterase 18; AltName:
Full=Ubiquitin-specific-processing protease 18
gi|3281861|emb|CAA19756.1| putative protein [Arabidopsis thaliana]
gi|7270070|emb|CAB79885.1| putative protein [Arabidopsis thaliana]
gi|23296513|gb|AAN13075.1| unknown protein [Arabidopsis thaliana]
gi|332660543|gb|AEE85943.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
Length = 631
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I ++PNIL I LKR++G GK++K I+F E L L+ +M + D
Sbjct: 354 CSDYVKACKRLTIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNPYMSEGG-DGSD 412
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ IVH S GHY YIKD G WY +DS + L++VLS++ Y+L +
Sbjct: 413 VYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYS 472
Query: 127 RANQRPVSA 135
R R S+
Sbjct: 473 RIQARSSSS 481
>gi|388580255|gb|EIM20571.1| cysteine proteinase [Wallemia sebi CBS 633.66]
Length = 515
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CKK V+A KQ ++ ++P L + LKRF + G K++ +++F+E L + +M K Q P+
Sbjct: 298 NCKKPVAATKQFTVHEAPQCLTVHLKRFSPL-GQKLNGSLSFDENLDIQKYMSKGQQSPK 356
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L+G + H G S SGHY A++K GRWY ND VS S S+ Y+LF+
Sbjct: 357 --YRLYGVVSHYGGSARSGHYIAHVKAPNGRWYEMNDDLVSPSK-PPFGSKNAYVLFY 411
>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
Length = 468
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ A K + + +P +L++ LKRF G G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKKPASKTLKLYSAPKVLMLVLKRFSGSMGKKLDRKVSYPEFLDLKPYLSQPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 290 -YALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQQ 348
Query: 129 N 129
N
Sbjct: 349 N 349
>gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++++ ++PNIL I LKRF+ GK++K+I F E+L L+ FM + D P
Sbjct: 834 CKSYEKAKKKLTVSEAPNILTIALKRFQSGKFGKLNKSIRFPEILDLAPFM-SGTSDKSP 892
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH + SGHY Y+K+ +W+ +DS V L+ VL++ Y+L +
Sbjct: 893 IYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYMLLYA 952
Query: 127 RANQR 131
R + R
Sbjct: 953 RCSPR 957
>gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++++ ++PNIL I LKRF+ GK++K+I F E+L L+ FM + D P
Sbjct: 846 CKSYEKAKKKLTVSEAPNILTIALKRFQSGKFGKLNKSIRFPEILDLAPFM-SGTSDKSP 904
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH + SGHY Y+K+ +W+ +DS V L+ VL++ Y+L +
Sbjct: 905 IYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYMLLYA 964
Query: 127 RANQR 131
R + R
Sbjct: 965 RCSPR 969
>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
Length = 601
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C ++V A KQ +I P +L + LKRF + G KI ++I F+E L L +
Sbjct: 363 ACTRMVEATKQYTIQSPPQVLTLHLKRFTPL-GKKIGRSIGFDEDLNLGRHTSE-DHGKG 420
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+G + H+G P SGHY A+++D++G W +DS+VS S S Y+LF+ R
Sbjct: 421 LRYRLYGIVHHAGGGPQSGHYIAHVRDSVGSWNRMDDSHVSPSERMPRQSSTAYVLFYAR 480
Query: 128 ANQRPVSANGTFASNGVKS 146
+ NG S+G S
Sbjct: 481 DVSLSAAINGASPSSGTPS 499
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
Full=Ubiquitin thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 672
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K++SI +PNIL I LKRF+G GK++K I+F E L +M +
Sbjct: 360 CDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDV 419
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ IVH S GHY Y+KD G WY +DS V L++VLS++ Y+L +
Sbjct: 420 -YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYS 478
Query: 127 RANQRP 132
R RP
Sbjct: 479 RVQPRP 484
>gi|449019625|dbj|BAM83027.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 500
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C A KQ+ I Q+P +L + LKRF + K+ + F E L L +M +
Sbjct: 330 ACHGYSDAEKQIRIRQAPVVLTLHLKRFHAL--RKLSGVVRFSEWLDLRPYMAEEFVAGP 387
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+LF IVH G S SGHYYA+++ A G W C+D ++S + V +++ Y+LF++R
Sbjct: 388 VMYRLFAVIVHEGHSLSSGHYYAFVRSASGAWLRCDDEHLSRVGIGSVFAQQAYLLFYLR 447
Query: 128 ANQRP 132
+ P
Sbjct: 448 VDAVP 452
>gi|299470395|emb|CBN80156.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 782
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 73/134 (54%), Gaps = 14/134 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDP 66
C KLV A K +S+ + PN LV QLKRF G G K+ I+F + L L + +
Sbjct: 349 CNKLVEAEKNLSVFKPPNALVFQLKRF-GFTNGPRKVKDHISFGDKLNLEV----SGPER 403
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L G +VHSG + SGHYYAY++ + G W NDS V+ TL VL +K Y+LF+
Sbjct: 404 WANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFYT 463
Query: 127 RAN-------QRPV 133
R QRP+
Sbjct: 464 RRPPPAPPAVQRPI 477
>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
Length = 467
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ A K + + +P +L++ LKRF G G K+D+ +++ E L L ++ + + P P
Sbjct: 229 CRQKKPASKTLKLYSAPKVLMLVLKRFSGSMGKKLDRKVSYPEFLDLKPYLSQPTGGPLP 288
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 289 -YALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQQ 347
Query: 129 N 129
N
Sbjct: 348 N 348
>gi|379030602|ref|NP_001243789.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 19 [Homo
sapiens]
gi|449061959|sp|D6RCP7.1|U17LJ_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
19
Length = 530
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|379030599|ref|NP_001243788.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 18 [Homo
sapiens]
gi|449061958|sp|D6R9N7.1|U17LI_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
18
Length = 530
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|378925634|ref|NP_001243783.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 11 [Homo
sapiens]
gi|449061954|sp|C9JVI0.1|U17LB_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
11
Length = 530
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|302142049|emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 75/125 (60%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++++ ++PNIL I LKRF+ GK++K+I F E+L L+ FM + D P
Sbjct: 656 CKSYEKAKKKLTVSEAPNILTIALKRFQSGKFGKLNKSIRFPEILDLAPFM-SGTSDKSP 714
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH + SGHY Y+K+ +W+ +DS V L+ VL++ Y+L +
Sbjct: 715 IYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYMLLYA 774
Query: 127 RANQR 131
R + R
Sbjct: 775 RCSPR 779
>gi|356529718|ref|XP_003533435.1| PREDICTED: uncharacterized protein LOC100808015 [Glycine max]
Length = 730
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK+ VS KQ+ + Q+P++ + LKRF+ GI KIDK I F L L + K +D
Sbjct: 305 NCKEEVSMEKQLMLDQTPSVAALHLKRFKTNGILVEKIDKHIDFPLELDLQPYTIKVMED 364
Query: 66 PQPE------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK 119
E Y L+ +VH+G S SGHY+ +++ A W+ +DS V+ ++ VLS++
Sbjct: 365 LVAENDVPLKYDLYAIVVHTGLSSTSGHYFCFVRSAPDTWHKLDDSMVTKVSVDSVLSQE 424
Query: 120 VYILFFIR 127
YILF+ R
Sbjct: 425 AYILFYAR 432
>gi|294866356|ref|XP_002764675.1| hypothetical protein Pmar_PMAR029116 [Perkinsus marinus ATCC 50983]
gi|239864365|gb|EEQ97392.1| hypothetical protein Pmar_PMAR029116 [Perkinsus marinus ATCC 50983]
Length = 1289
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF-EGIFGGKIDK---AIAFEEVLVLSSFMC-KAS 63
CK+ V+A+K + +P L + LKR+ G FGG+ K + +E+ L LS F+ +
Sbjct: 288 CKRNVTAKKSTRLYDAPMNLTLSLKRYCYGRFGGRRQKDGHYVKYEKELDLSKFIADHGA 347
Query: 64 QDP--QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
P +Y L G +VHSG +P GHYYA++++ G WYCC+D V+ + VLS++ Y
Sbjct: 348 STPGVSNKYTLSGVLVHSGATPQLGHYYAFVRNPAGFWYCCDDESVTPAKEHTVLSQQAY 407
Query: 122 ILFFIR 127
ILF+ R
Sbjct: 408 ILFYER 413
>gi|302847648|ref|XP_002955358.1| hypothetical protein VOLCADRAFT_65702 [Volvox carteri f.
nagariensis]
gi|300259430|gb|EFJ43658.1| hypothetical protein VOLCADRAFT_65702 [Volvox carteri f.
nagariensis]
Length = 293
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 7/124 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++LV A KQ +I PN+LV+ LKRF+G G + K ++ L L+ +
Sbjct: 172 CRQLVPAIKQTTIWDDPNVLVLHLKRFDG--GSLLGKITRHQQELELAETGGDDAGADGG 229
Query: 69 E-----YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
Y L G +VH G S SGHYYA+++D+ G W C NDS+V ++L++V E+ Y+L
Sbjct: 230 GGHSSIYTLTGVLVHQGASLHSGHYYAFVRDSHGGWSCMNDSHVYGTSLEQVRQEQAYLL 289
Query: 124 FFIR 127
F+ R
Sbjct: 290 FYTR 293
>gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297326442|gb|EFH56862.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 650
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K++SI +PNIL I LKRF+G GK++K I+F E L +M +
Sbjct: 360 CDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSSGVEGSDV 419
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ IVH S GHY Y+KD G WY +DS V L++VLS++ Y+L +
Sbjct: 420 -YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYS 478
Query: 127 RANQRP 132
R RP
Sbjct: 479 RVQPRP 484
>gi|379030610|ref|NP_001243792.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 22 [Homo
sapiens]
gi|449061962|sp|D6RA61.1|U17LM_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
22
Length = 530
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|379030604|ref|NP_001243790.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 20 [Homo
sapiens]
gi|449061960|sp|D6RJB6.1|U17LK_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
20
Length = 530
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|334191675|ref|NP_001229255.1| ubiquitin specific peptidase 17-like family member 25 [Homo
sapiens]
gi|334191677|ref|NP_001229257.1| ubiquitin specific peptidase 17-like family member 26 [Homo
sapiens]
gi|334191681|ref|NP_001229259.1| ubiquitin specific peptidase 17-like family member 27 [Homo
sapiens]
gi|334191683|ref|NP_001229260.1| ubiquitin specific peptidase 17-like family member 28 [Homo
sapiens]
gi|334191685|ref|NP_001229261.1| ubiquitin specific peptidase 17-like family member 29 [Homo
sapiens]
gi|337756779|ref|NP_001229256.1| ubiquitin specific peptidase 17-like family member 24 [Homo
sapiens]
gi|379030622|ref|NP_001243796.1| ubiquitin specific peptidase 17-like family member 30 [Homo
sapiens]
gi|187663978|sp|Q0WX57.2|U17LO_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
24; AltName: Full=Deubiquitinating enzyme 17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
Length = 530
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|334191679|ref|NP_001229258.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 5 [Homo
sapiens]
gi|187663984|sp|A8MUK1.2|U17L5_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
5; AltName: Full=Deubiquitinating enzyme 17-like protein
5; AltName: Full=Ubiquitin thioesterase 17-like protein
5; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 5
Length = 530
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|357125023|ref|XP_003564195.1| PREDICTED: uncharacterized protein LOC100826635 [Brachypodium
distachyon]
Length = 895
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C++ V A+K+ +I ++PN+L I LKRF KIDK + F+ VL L F+ S+
Sbjct: 238 CRQKVVAKKRFTIDRAPNVLTIHLKRFSPFNPRDKIDKKVDFQPVLDLKPFVSD-SKVSD 296
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ GHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 297 YKYSLYGVLVHAGWNTQCGHYYCFVRTSSGMWHNLDDNQVRQVREADVLKQKAYMLFYVR 356
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 264 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSQPTAGPLP 323
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 324 -YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 382
Query: 129 N 129
N
Sbjct: 383 N 383
>gi|428167496|gb|EKX36454.1| hypothetical protein GUITHDRAFT_165733 [Guillardia theta CCMP2712]
Length = 1003
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK+ A KQ+ I PNILV+QLKRF G+ GGKI ++I++ VL + ++ +
Sbjct: 128 CKRRSQATKQLRIHTLPNILVVQLKRFSFWGLHGGKISRSISYPAVLDMRPYLTSPERHF 187
Query: 67 QPE-YKLFGTIVHSGFSPDSGHYYAYIKDAI----GRWYCCNDSYVSVSTLQEVLSEKVY 121
Y L+G +VH G S GHY +Y+K A G WY +DS+ L L + Y
Sbjct: 188 NNSIYDLYGVLVHEGSSLQYGHYLSYVKHACKHKEGSWYQMDDSHTMKVDLDTALRQNAY 247
Query: 122 ILFFIR 127
ILF+ R
Sbjct: 248 ILFYAR 253
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 263 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSQPTAGPLP 322
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 323 -YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 381
Query: 129 N 129
N
Sbjct: 382 N 382
>gi|308808989|ref|XP_003081804.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
gi|116060271|emb|CAL55607.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
Length = 688
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGI-FG-GKIDKAIAFEEVLVLSSFMCKASQDPQPE 69
A KQ ++ Q+PN+L +QLKRF + FG GK+ + + VL ++ ++ ++ +
Sbjct: 318 FTKASKQFTVDQAPNVLAVQLKRFAYVPFGRGKLSHFVEYPLVLDVTPYLSDEDRNSKNR 377
Query: 70 --YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G +VH+G S +SGHYY ++K A G W +D VS + + VL ++ Y+LF+ R
Sbjct: 378 AVYDLYGVLVHAGSSSNSGHYYCFVKTATGTWCEMDDESVSSVSEKTVLKQQAYLLFYAR 437
Query: 128 ANQRPVSANGTF 139
N A GTF
Sbjct: 438 RN-----APGTF 444
>gi|215736860|dbj|BAG95789.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 750
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C+K V A+K+ +I ++P +L I LKRF KIDK + F+ +L L F+ S+
Sbjct: 95 CRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD-SKGAD 153
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 154 FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 213
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSQPTAGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 290 -YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 348
Query: 129 N 129
N
Sbjct: 349 N 349
>gi|339254984|ref|XP_003371133.1| ubiquitin carboxyl- hydrolase 36 [Trichinella spiralis]
gi|316960713|gb|EFV48060.1| ubiquitin carboxyl- hydrolase 36 [Trichinella spiralis]
Length = 247
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 3/97 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ VSARK ++I +PN+L I LKRF+ GKID+ I + + + L FM + Q P
Sbjct: 153 CKRRVSARKILTIHSAPNVLTIHLKRFDHF--GKIDRHIGYSDRMNLRPFMTE-KQGPPV 209
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDS 105
Y+L+G ++H+G S +SGHYYA++ + +G+W+ +DS
Sbjct: 210 NYRLYGVVIHNGRSTNSGHYYAFVCNPLGQWHLMDDS 246
>gi|255548628|ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 632
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I ++PNIL I LKRF+ GK++K +AF E L LS + + D
Sbjct: 361 CNDYVKAWKRLTIRRAPNILTIALKRFQSGRFGKLNKRVAFPESLDLSPYTSEGG-DGTD 419
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L+ +VH S GHY YIKD G WY +D V L+EVLS+ Y+L +
Sbjct: 420 VYRLYAVVVHVDMLNASFFGHYICYIKDFCGNWYRVDDCKVRSVELEEVLSQGAYMLLYS 479
Query: 127 RANQRP 132
R + RP
Sbjct: 480 RISARP 485
>gi|359496742|ref|XP_003635320.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 860
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+ A+K++ +L++PNIL I LKRF+ GK++K++ F E L ++ +M + D P
Sbjct: 579 CRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNMTPYM-SGTDDRYP 637
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY ++K+ +G W+ +DS V+ L VL E Y+L +
Sbjct: 638 VYSLYAVVVHLDIMNAAFSGHYVCFVKN-LGDWFRIDDSTVTPVELDRVLLEGAYMLLYA 696
Query: 127 RANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKP 170
R + +P + + N SHE GK + ++ VP ATKP
Sbjct: 697 RRSPKPPA----LSRNMAVSHE-GKLKMRNLEA-VPSSLAATKP 734
>gi|109133433|ref|XP_001082678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Macaca
mulatta]
Length = 530
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGSKLAKNVHYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|114598756|ref|XP_001139436.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Pan
troglodytes]
Length = 530
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313123|gb|EFH43546.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I ++PNIL I LKR++G GK++K I+F L L+ +M + D
Sbjct: 354 CSDYVKACKRLTIWRAPNILTIALKRYQGGRYGKLNKRISFPATLDLNPYMSEGG-DGSD 412
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ IVH S GHY YIKD G WY +DS + L++VLS++ Y+L +
Sbjct: 413 VYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYS 472
Query: 127 RANQRPVSA 135
R R S+
Sbjct: 473 RIQARSSSS 481
>gi|168051663|ref|XP_001778273.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670370|gb|EDQ56940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQ 64
+CK+ V A KQ +I +SP +L IQ KRF KIDK I F L + ++ +
Sbjct: 153 TCKQKVCALKQFTIDKSPIVLTIQFKRFSASGSSSGGKIDKKIDFGRTLAMRPYISNP-E 211
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
D Y L+ +VH+G+S SGHYY +++ + G W+ +DS V + + VL +K YILF
Sbjct: 212 DSDANYSLYAVLVHAGWSTHSGHYYCFVRTSGGLWHNLDDSRVRQVSEKTVLEQKAYILF 271
Query: 125 FIR 127
+IR
Sbjct: 272 YIR 274
>gi|37778800|gb|AAO38845.1| deubiquitinating enzyme 3 [Homo sapiens]
Length = 530
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSIISVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|378925638|ref|NP_001243786.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 17 [Homo
sapiens]
gi|449061957|sp|D6RBQ6.1|U17LH_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
17
Length = 530
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ +++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|40804411|gb|AAR91701.1| deubiquitinating enzyme 3 [Homo sapiens]
gi|162317638|gb|AAI56291.1| Deubiquitinating enzyme 3 [synthetic construct]
gi|162319434|gb|AAI57074.1| Deubiquitinating enzyme 3 [synthetic construct]
Length = 530
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|378925636|ref|NP_001243784.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 13 [Homo
sapiens]
gi|449061955|sp|C9JLJ4.1|U17LD_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
13
Length = 530
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ +++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|242094960|ref|XP_002437970.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
gi|241916193|gb|EER89337.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
Length = 917
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C++ V A+K+ +I ++PN+L I LKRF KIDK + F+ L L F+ S+
Sbjct: 275 CRQKVVAKKRFTIDKAPNVLTIHLKRFSPFNPREKIDKKVDFQPSLDLKPFVSD-SKGTD 333
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 334 FKYSLYGVLVHTGWNTQSGHYYCFVRTSSGMWHNLDDNKVRQVREADVLKQKAYMLFYVR 393
>gi|33333162|gb|AAQ11742.1| deubiquitinating enzyme DUB2 [Homo sapiens]
Length = 530
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VL+++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITPVLTQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
Length = 874
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C+K V A+K+ +I ++P +L I LKRF KIDK + F+ +L L F+ S+
Sbjct: 244 CRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD-SKGAD 302
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 303 FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 362
>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
Length = 899
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C+K V A+K+ +I ++P +L I LKRF KIDK + F+ +L L F+ S+
Sbjct: 244 CRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD-SKGAD 302
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 303 FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 362
>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
Length = 940
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C+K V A+K+ +I ++P +L I LKRF KIDK + F+ +L L F+ S+
Sbjct: 285 CRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD-SKGAD 343
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 344 FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 403
>gi|351702295|gb|EHB05214.1| Ubiquitin carboxyl-terminal hydrolase 17 [Heterocephalus glaber]
Length = 491
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + + A K MS+ S +L++ LKRF G K K + + E L + +M + ++ P
Sbjct: 216 CLQKMPATKTMSLHTSSEVLILVLKRFSDFTGEKFAKHVQYSECLDMQPYMSEQNRGPLL 275
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ ++H+G + SGHY++Y+K GRWY ND+ V+ + VL++ Y+LF++R
Sbjct: 276 -YTLYAVLIHAGSTCHSGHYFSYVKAGDGRWYQMNDNKVTACDTRCVLAQDAYVLFYVRK 334
Query: 129 NQRP 132
P
Sbjct: 335 TNLP 338
>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
Length = 540
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 264 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLP 323
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + +SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 324 -YALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>gi|296083782|emb|CBI23999.3| unnamed protein product [Vitis vinifera]
Length = 892
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K++++ +PNIL I LKRF+ GK++K + F E L LS +M KA
Sbjct: 306 CNDYVKASKRLTVRHAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSKAVVGTDV 365
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ +VH S GHY Y KD G WY +D V+ L +VLS+ Y+L +
Sbjct: 366 -YKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCKVTRVELDDVLSQGAYMLLYS 424
Query: 127 RANQRPVSANGT--FASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTIS 184
R R T F + E +E K V A K + +SSR PS +
Sbjct: 425 RVCVRSSCLKTTEPFKKENEQMVEVAQEVEPCSKQPVECFTKAEKSNHVESSRFLPSESN 484
Query: 185 KVEKVPSNPRLKF 197
KV + L F
Sbjct: 485 ACSKVSNCEELSF 497
>gi|359476454|ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
vinifera]
Length = 940
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K++++ +PNIL I LKRF+ GK++K + F E L LS +M KA
Sbjct: 382 CNDYVKASKRLTVRHAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSKAVVGTDV 441
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ +VH S GHY Y KD G WY +D V+ L +VLS+ Y+L +
Sbjct: 442 -YKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCKVTRVELDDVLSQGAYMLLYS 500
Query: 127 RANQRPVSANGT--FASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTIS 184
R R T F + E +E K V A K + +SSR PS +
Sbjct: 501 RVCVRSSCLKTTEPFKKENEQMVEVAQEVEPCSKQPVECFTKAEKSNHVESSRFLPSESN 560
Query: 185 KVEKVPSNPRLKF 197
KV + L F
Sbjct: 561 ACSKVSNCEELSF 573
>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
protein 6; AltName: Full=Ubiquitin carboxyl-terminal
hydrolase 17-like protein 2; AltName: Full=Ubiquitin
thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 540
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 264 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLP 323
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + +SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 324 -YALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>gi|41019553|tpe|CAD66057.1| TPA: mouse deubiquitinating enzyme 6 [Mus musculus]
Length = 505
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ LKRF G K+D+ +++ E L L ++ + + P P
Sbjct: 229 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLP 288
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + +SGHY+ +K G+WY +D+ V+ + VL+E Y+LF+++
Sbjct: 289 -YALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 346
>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
Length = 940
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C+K V A+K+ +I ++P +L I LKRF KIDK + F+ +L L F+ S+
Sbjct: 285 CRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD-SKGAD 343
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 344 FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 403
>gi|125561915|gb|EAZ07363.1| hypothetical protein OsI_29613 [Oryza sativa Indica Group]
Length = 978
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K+++I ++PN+L I LKR++ GKI+KAI F E L L +M + D P
Sbjct: 635 CKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQRYMSPKADDTSP 694
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+ + VH + SGHY Y+KD G+WY +DS V +L+ V+S+ Y+L +
Sbjct: 695 GLQPVCSGVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYMLLYA 754
Query: 127 RANQRPVSA 135
R + R S+
Sbjct: 755 RCSPRAPSS 763
>gi|187663985|sp|Q6QN14.2|U17L6_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
6; AltName: Full=Deubiquitinating enzyme 17-like protein
6; AltName: Full=Ubiquitin thioesterase 17-like protein
6; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 6
Length = 398
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|168040440|ref|XP_001772702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675927|gb|EDQ62416.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K++++ ++PNIL I LKRF+ GK++K + F + L +S +M + D P
Sbjct: 309 CNAYVRAGKRLTVHEAPNILTIALKRFQSGKFGKLNKRVTFPKTLDMSPYM-SGTNDDSP 367
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH S GHY Y+KD+ G WY +DS V L++VL++K Y+LF+
Sbjct: 368 LYGLYAVVVHVDLLNASFFGHYICYVKDSNGVWYKIDDSKVKEVELEKVLAQKAYMLFYT 427
Query: 127 R 127
R
Sbjct: 428 R 428
>gi|29367503|gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 842
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C+K V A+K+ +I ++P +L I LKRF KIDK + F+ +L L F+ S+
Sbjct: 187 CRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD-SKVSN 245
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 246 LKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFYVR 305
>gi|51969076|dbj|BAD43230.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I ++PNIL I LKR++G GK++K I+F E L L+ +M + D
Sbjct: 354 CSDYVKACKRLTIRRAPNILTIALKRYQGGRYGKLNKRISFPETLDLNPYMSEGG-DGSD 412
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ IVH S HY YIKD G WY +DS + L++VLS++ Y+L +
Sbjct: 413 VYKLYAVIVHLDMLNASFFSHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYMLLYS 472
Query: 127 RANQRPVSA 135
R R S+
Sbjct: 473 RIQARSSSS 481
>gi|383858607|ref|XP_003704791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Megachile
rotundata]
Length = 880
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP- 66
+CKK V A KQ S+ + P +L +QLKRF + GGKI K I F++ + + ++ + +P
Sbjct: 311 ACKKRVPATKQFSLERPPKVLCVQLKRF-SVLGGKISKHIGFKQSIDMGPYLWREPGEPI 369
Query: 67 QP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
QP YKL + H G S + GHY A K + G++Y +DS V +L +LS YI+ F
Sbjct: 370 QPLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPISLSNMLSTNAYIMIF 429
Query: 126 IRANQRP--------VSANGTFASNGVKS 146
Q P V NGT N S
Sbjct: 430 EMEQQTPSQVQTQQTVKLNGTVTVNNTIS 458
>gi|299470394|emb|CBN80155.1| Ubiquitin-specific protease 16 [Ectocarpus siliculosus]
Length = 1055
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF---GGKIDKAIAFEEVLVLSSFMCKASQD 65
CKK V A K +S+ + PN LV+QLKRF +F KI I F +VL LS + +
Sbjct: 274 CKKPVQAEKSLSVFKPPNALVLQLKRF--VFTRKASKIKDHIQFADVLNLSV----SGPE 327
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y L G +VH+G S SGHYYAY++ G W +D VS + VL ++ Y+LF+
Sbjct: 328 RSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWSRMDDCSVSKVKRETVLRDQAYVLFY 387
Query: 126 IR 127
R
Sbjct: 388 TR 389
>gi|302696891|ref|XP_003038124.1| hypothetical protein SCHCODRAFT_37924 [Schizophyllum commune H4-8]
gi|300111821|gb|EFJ03222.1| hypothetical protein SCHCODRAFT_37924, partial [Schizophyllum
commune H4-8]
Length = 314
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A K+ +I ++P +L I LKRF FG K+ + ++E + L +M + S P+
Sbjct: 199 CKKYVNAEKRFTINKAPLVLTIHLKRFSP-FGSKLTNLLHYDEHITLKPYMSEGSFGPR- 256
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G I HSG P+SGHY++++K GRWY ND V+ + + + Y+L +I+
Sbjct: 257 -YSLYGVICHSGSGPNSGHYFSFVKSKQGRWYEMNDESVTPCSKPYPMLKTAYMLMYIQ 314
>gi|332244679|ref|XP_003271501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 1 [Nomascus leucogenys]
gi|332267671|ref|XP_003282805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
gi|441611210|ref|XP_004088001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 2 [Nomascus leucogenys]
Length = 529
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S + VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|440804615|gb|ELR25492.1| ubiquitin specific protease, putative [Acanthamoeba castellanii
str. Neff]
Length = 695
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 79/124 (63%), Gaps = 9/124 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C K+V+A+KQ+++ ++P ILV+QLKRF+ + GGKI+K + F E L ++ M S+D +
Sbjct: 247 CNKVVTAQKQLTVDRAPPILVVQLKRFDVMSGGGKINKTVTFREQLDIAKVM---SEDKK 303
Query: 68 PE----YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
E Y+L+GTIVH G + SGHY ++IK + G W+ +D V VL + Y+L
Sbjct: 304 EEGGVLYELYGTIVHYGRTMFSGHYVSFIK-SNGLWHLFDDDQVVEVNNAIVLKQNAYML 362
Query: 124 FFIR 127
FF R
Sbjct: 363 FFQR 366
>gi|332244521|ref|XP_003271421.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
Length = 529
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S + VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|348552570|ref|XP_003462100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Cavia
porcellus]
Length = 491
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + + A K +++ + +L+I LKRF + G KI K + + E L + +M + + P
Sbjct: 223 CLQKMPASKTLTLHTASKVLIILLKRFSDVTGKKIAKHVQYSECLDMQPYMSEQNNKPLL 282
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+GF+ SGHY++Y++ G WY ND+ V+ L + Y+LF+++
Sbjct: 283 -YTLYAVLVHAGFTSHSGHYFSYVRAGDGHWYKMNDNKVTACDRTSALIQDAYVLFYVQR 341
Query: 129 NQRPVSANGTFASNGVKSHE 148
+ ++G A K+ E
Sbjct: 342 SNLETDSSGMSADTKAKTLE 361
>gi|392568498|gb|EIW61672.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 664
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A K+ +I ++P +L + LKRF + G KI +++ E L L +M P
Sbjct: 298 CKKPVNADKRFTIDEAPVVLTLHLKRFSPM-GRKIPHPVSYPERLTLQPYMSDGKFGPS- 355
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ I H+G P+SGHYYA++K G WY ND V + Y+LF+IR
Sbjct: 356 -YSLYAVISHAGSGPNSGHYYAHVKGGNGTWYEMNDESVMRQSSAPTNMRSAYMLFYIR 413
>gi|6681237|ref|NP_031913.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Mus musculus]
gi|2501457|sp|Q61068.1|UBPW_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase DUB-1; AltName:
Full=Deubiquitinating enzyme 1; AltName: Full=Ubiquitin
thioesterase DUB-1; AltName:
Full=Ubiquitin-specific-processing protease DUB-1
gi|1302630|gb|AAC52532.1| DUB-1 [Mus musculus]
gi|148684794|gb|EDL16741.1| mCG66629 [Mus musculus]
Length = 526
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ L RF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI-R 127
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+LF++ +
Sbjct: 290 -YALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 348
Query: 128 ANQRPVSAN 136
AN + VS +
Sbjct: 349 ANLKQVSID 357
>gi|388851883|emb|CCF54477.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Ustilago
hordei]
Length = 749
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V A KQ +I P L + LKRF FGGKI + I+F+E L ++ ++ S++ P
Sbjct: 395 CKRKVDATKQFTIESCPPALTVHLKRFTA-FGGKISRQISFDESLNIAPYL---SENRGP 450
Query: 69 -EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS-VSTLQEVLSEKVYILFFI 126
YKL+ + H G P+SGHY A +K G+W +DS+VS + V + YILF++
Sbjct: 451 VRYKLYAAVHHYGSGPNSGHYVASVKAPCGKWTRMDDSHVSEIGRGGPVNDQSAYILFYL 510
Query: 127 RAN 129
R N
Sbjct: 511 REN 513
>gi|18416380|ref|NP_567705.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
gi|75265551|sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|4220534|emb|CAA23007.1| putative protein [Arabidopsis thaliana]
gi|7269306|emb|CAB79366.1| putative protein [Arabidopsis thaliana]
gi|332659526|gb|AEE84926.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
Length = 1008
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 4/127 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SCK A+K++ I + PN+L I LKRF+ GK++K I F E L L+ ++ S+
Sbjct: 727 SCKSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGSEKSH 786
Query: 68 PEYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+YKL+G IVH + SGHY YI++ +WY +DS V S ++ +L++ Y+LF+
Sbjct: 787 -DYKLYGVIVHLDVMNAAFSGHYVCYIRNQ-NKWYKADDSTVVTSDVERILTKGAYMLFY 844
Query: 126 IRANQRP 132
R P
Sbjct: 845 ARCTPTP 851
>gi|11993477|gb|AAG42757.1|AF302666_1 ubiquitin-specific protease 16 [Arabidopsis thaliana]
Length = 1008
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 4/127 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SCK A+K++ I + PN+L I LKRF+ GK++K I F E L L+ ++ S+
Sbjct: 727 SCKSYERAKKKLKITEPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGSEKSH 786
Query: 68 PEYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+YKL+G IVH + SGHY YI++ +WY +DS V S ++ +L++ Y+LF+
Sbjct: 787 -DYKLYGVIVHLDVMNAAFSGHYVCYIRNQ-NKWYKADDSTVVTSDVERILTKGAYMLFY 844
Query: 126 IRANQRP 132
R P
Sbjct: 845 ARCTPTP 851
>gi|255083302|ref|XP_002504637.1| predicted protein [Micromonas sp. RCC299]
gi|226519905|gb|ACO65895.1| predicted protein [Micromonas sp. RCC299]
Length = 368
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK L A K+++I ++P ILV+ LKRF+ +GGKI+ + F E L L M + +++ P
Sbjct: 248 CKDLCPATKRLTIHEAPAILVVHLKRFDH-YGGKINSPVDFTERLTLGGHMSEDAEEAGP 306
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+ + HSG + Y A + WY C+DS V +V E+ Y+LF+ R
Sbjct: 307 AYRLYAMVTHSGNDAIASFYGAATNASDDEWYLCDDSSVRRVNRADVFDEQAYVLFYER 365
>gi|45386059|gb|AAS59847.1| deubiquitinating enzyme DUB4 [Homo sapiens]
Length = 398
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VL+++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLTQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|119613077|gb|EAW92671.1| hCG1807742 [Homo sapiens]
Length = 314
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 173 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLV 232
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 233 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 290
>gi|187954679|gb|AAI40989.1| Deubiquitinating enzyme 1 [Mus musculus]
Length = 526
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ L RF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CREKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI-R 127
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+LF++ +
Sbjct: 290 -YALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQQ 348
Query: 128 ANQRPVSAN 136
AN + VS +
Sbjct: 349 ANLKQVSID 357
>gi|213402519|ref|XP_002172032.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212000079|gb|EEB05739.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 441
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 5/123 (4%)
Query: 8 SCKKLVSA-RKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQ 64
+CK L +KQM++ ++PN L + LKRF KI K +A+ E+L L FM A++
Sbjct: 290 NCKTLGGMLQKQMTVYRAPNYLTLHLKRFTFNSFHSHKITKHVAYPELLDLGPFMSDANR 349
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y+L G +VH+G S SGHYY++ K + G W +D +VS +++ VLS++ YIL
Sbjct: 350 --ACVYELCGVLVHAGGSTRSGHYYSFCKSSSGTWLKFDDDFVSNTSIDRVLSQQAYILL 407
Query: 125 FIR 127
+ R
Sbjct: 408 YRR 410
>gi|378925630|ref|NP_001243781.1| ubiquitin specific peptidase 17-like family member 10 [Homo
sapiens]
gi|449061953|sp|C9JJH3.1|U17LA_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
10
Length = 530
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G KI K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHNSAKVLILVLKRFPDVTGNKIAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYSSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|409079510|gb|EKM79871.1| hypothetical protein AGABI1DRAFT_23476, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426192538|gb|EKV42474.1| hypothetical protein AGABI2DRAFT_53097, partial [Agaricus bisporus
var. bisporus H97]
Length = 309
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V+A K+ +I ++P++L + LKRF + G KI + ++E L L +M K
Sbjct: 194 CKKHVNAEKRFTIHEAPSVLTVHLKRFSPL-GRKIGHHVIYDEHLNLQPYMSKGQYGFT- 251
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G I H+G P+SGHY+A++K GRWY ND S + V + YILF++R
Sbjct: 252 -YSLYGVICHAGGGPNSGHYFAFVKSRSGRWYEMNDEMASPISGPPVSKKTAYILFYMR 309
>gi|426358871|ref|XP_004046713.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 355
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 82 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 141
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S SGHY +Y+K G+WY +D+ V+ S + VLS++ Y+LF+I+
Sbjct: 142 -YVLYAVLVHAGWSCHSGHYLSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQK 200
Query: 129 NQ 130
++
Sbjct: 201 SE 202
>gi|426358866|ref|XP_004046711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S SGHY +Y+K G+WY +D+ V+ S + VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHSGHYLSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|224088268|ref|XP_002308398.1| predicted protein [Populus trichocarpa]
gi|222854374|gb|EEE91921.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 73/120 (60%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A+K +++ ++P++L I LKRF G K+D+ + F+ L + F+ S +
Sbjct: 95 CKQKVRAKKWLTVHKAPHVLTIHLKRFHAHDPGRKVDRKVIFDRSLDMKPFV-SGSYEGD 153
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH G + SGHY +++ + G W+ ND+ V + + VL +K Y+LF++R
Sbjct: 154 LKYSLYGVLVHYGHNTHSGHYVCFVRTSSGIWHLLNDNQVRQVSEKAVLEQKAYMLFYVR 213
>gi|332819099|ref|XP_001175011.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 [Pan
troglodytes]
Length = 354
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 150 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 209
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S++ VLS++ Y+LF+I+
Sbjct: 210 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSVTSVLSQQAYVLFYIQK 268
Query: 129 NQ 130
++
Sbjct: 269 SE 270
>gi|412989987|emb|CCO20629.1| predicted protein [Bathycoccus prasinos]
Length = 706
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 35/152 (23%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI-FG-GKIDKAIAFEEVLVLSSFMC------ 60
CKKL A+KQ S+ ++PN+L IQLKRFE + FG GK+ + I + VL L+S++
Sbjct: 291 CKKLSRAKKQFSVDKAPNVLQIQLKRFEFVPFGRGKLSQFIEYPLVLDLTSYLTSILKIN 350
Query: 61 ---------------------------KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIK 93
KA Y L G +VH+G S +SGHYY+Y+K
Sbjct: 351 GGRRGKKRSKSANNAVLDDIMGGSSTEKAFSSSSSVYDLIGVLVHAGSSMNSGHYYSYVK 410
Query: 94 DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
G W+ +D V+ + + VL +K Y+LF+
Sbjct: 411 AQNGFWFEMDDESVTNVSEKTVLRQKAYLLFY 442
>gi|443897312|dbj|GAC74653.1| ubiquitin carboxyl-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 744
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V A KQ +I +P L + LKRF +FGGK+ + IAF+++L ++ ++ + P
Sbjct: 388 CKRKVDATKQFTIDAAPPALTVHLKRFT-VFGGKVSRQIAFDDMLNIAPYLS-VNNGPA- 444
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS-VSTLQEVLSEKVYILFFIR 127
Y+L+ T+ H G P+SGHY A ++ G+W +DS+V+ + + YILF++R
Sbjct: 445 RYRLYATVHHYGSGPNSGHYVASVRSPSGKWMRMDDSHVAEMGRSGPTNDQSAYILFYLR 504
>gi|281201291|gb|EFA75503.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 643
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE 69
LV A K+M+I +P +L +QLKRF G GGKI K + F+ VL L+ +M ++ D
Sbjct: 299 LVKASKRMTIHVAPPVLTVQLKRFSFLGFHGGKISKPVQFDPVLNLTPYMTTSTNDV--V 356
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS 108
Y L+G +VH+G S +SGHYY Y K + G W+ ND VS
Sbjct: 357 YDLYGVLVHAGSSTNSGHYYCYTKSSSGVWHGLNDESVS 395
>gi|153792150|ref|NP_958804.2| ubiquitin carboxyl-terminal hydrolase 17 [Homo sapiens]
gi|187663988|sp|Q6R6M4.2|U17L2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase 17-like protein 2; AltName:
Full=Ubiquitin thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 530
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S GHY++Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAKVTACSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|170091622|ref|XP_001877033.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648526|gb|EDR12769.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 312
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ +I ++P +L + KRF + G KI I FEE L L FM + P
Sbjct: 197 CKKHVVAEKRFTIHEAPLVLTVHFKRFSPM-GRKIGHHINFEEHLSLKPFMSEGQHGPS- 254
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G I H+G P+SGHYYA++K G+W+ ND S + Y+LF+IR
Sbjct: 255 -YSLYGIICHAGGGPNSGHYYAFVKAKDGQWWEMNDEMRSRVGSAPTNKKTAYMLFYIR 312
>gi|348550615|ref|XP_003461127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 391
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C +V A K +SI + N+L + LK F G KI K + + E L + ++M + S +
Sbjct: 274 CNSMVPASKSLSIHRPSNVLTLTLKGFSNCTGSKIAKIVKYPEHLNIRAYMSQPSGEAM- 332
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+ +VH+G GHY++Y+K + G WY ND VS S + VLS++ YILF+IR
Sbjct: 333 QYSLYAVLVHTGSKCCVGHYFSYVKASNGLWYQMNDFMVSPSDISSVLSQQAYILFYIR 391
>gi|379030631|ref|NP_001243800.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 3 [Homo
sapiens]
gi|187653918|sp|A6NCW0.1|U17L3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
3; AltName: Full=Deubiquitinating enzyme 17-like protein
3; AltName: Full=Ubiquitin thioesterase 17-like protein
3; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 3
Length = 530
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S GHY++Y+K G+WY +D+ V+V ++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|357489973|ref|XP_003615274.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355516609|gb|AES98232.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1050
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 7/148 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+KQM++ ++PN+L I LKRF GK++K+I F E+L L+ FM S
Sbjct: 727 CKSYEKAKKQMAVSEAPNVLTIALKRFRSGKFGKLNKSIRFPEILDLAPFMSGTSD--LA 784
Query: 69 EYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVS--TLQEVLSEKVYILF 124
Y+L+G +VH + + SGHY Y+K+ W+ +DS V V+ L+ VL++ Y+L
Sbjct: 785 IYRLYGVVVHLDTMNAAFSGHYVGYVKNFQNSWFKVDDSVVRVTPVELETVLTKGAYMLL 844
Query: 125 FIRANQR-PVSANGTFASNGVKSHENGK 151
+ R + R P S+ KS NGK
Sbjct: 845 YARCSPRAPRLIRDMIVSSDSKSKVNGK 872
>gi|402911939|ref|XP_003918556.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 409
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 6 LFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
L+SC + A K ++ S +L++ LKRF + G K+ K + + E L + +M + +
Sbjct: 134 LWSCLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTG 193
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P Y L+ +VH+G+ +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+
Sbjct: 194 PLV-YVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFY 252
Query: 126 IRANQ 130
I+ ++
Sbjct: 253 IQKSE 257
>gi|145351953|ref|XP_001420324.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580558|gb|ABO98617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 312
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS--QDP 66
CK LV A+K I SPNIL I LKR+ KI K I + L+ FM + +
Sbjct: 192 CKALVRAKKGSKIHVSPNILTIPLKRYSTGRFSKITKYIKYPSNFSLAEFMSDDAPYEVT 251
Query: 67 QPEYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
PEY+LFG +VH F S SGHY AY+K W CNDS VS S+ ++ + +K YILF
Sbjct: 252 APEYELFGVLVHQDFYASAHSGHYVAYVKLRDDSWVLCNDSRVSPSSEKDAMKQKAYILF 311
Query: 125 F 125
+
Sbjct: 312 Y 312
>gi|297799550|ref|XP_002867659.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
gi|297313495|gb|EFH43918.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
Length = 1007
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SCK A+K++ I PN+L I LKRF+ GK++K I F E L L+ ++ S+
Sbjct: 725 SCKSYERAKKKLKITDPPNVLTIALKRFQAGKFGKLNKLIRFPETLDLAPYVSGGSEKSH 784
Query: 68 PEYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+YKL+G IVH + SGHY YI++ +WY +DS V S ++ ++++ Y+LF+
Sbjct: 785 -DYKLYGVIVHLDIMNAAFSGHYVCYIRNQ-NKWYKADDSTVVTSDVERIMTKGAYMLFY 842
Query: 126 IRANQRP 132
R P
Sbjct: 843 ARCTPMP 849
>gi|125598076|gb|EAZ37856.1| hypothetical protein OsJ_22202 [Oryza sativa Japonica Group]
Length = 995
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A+K++++ Q+PNIL I LKRF+ GK++K + F L L+ +M +S D
Sbjct: 318 CSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPYM--SSTDGSD 375
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+Y L+ +VH S GHY YIK+ GRWY +D V +EV ++ Y+L +
Sbjct: 376 QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLYS 435
Query: 127 RANQRP 132
R RP
Sbjct: 436 RRTARP 441
>gi|302797124|ref|XP_002980323.1| hypothetical protein SELMODRAFT_420048 [Selaginella moellendorffii]
gi|300151939|gb|EFJ18583.1| hypothetical protein SELMODRAFT_420048 [Selaginella moellendorffii]
Length = 924
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 17/141 (12%)
Query: 6 LFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
LFSCK+L S+ ++PNIL I LKRF+ GK++K + F E L +S +M
Sbjct: 422 LFSCKRL-------SVYEAPNILTIALKRFQSGKFGKLNKRVTFPEALNISPYMSGEGDK 474
Query: 66 PQPEYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P P Y+L+ +VH S GHY Y++D G WY V ++V+S+K Y+L
Sbjct: 475 P-PLYRLYAVVVHVDMLNASFFGHYICYVRDMTGTWY-----KVKEVDTEKVMSQKAYML 528
Query: 124 FFIRANQR--PVSANGTFASN 142
+ R++ R P +A G+ AS
Sbjct: 529 MYSRSSARPGPETAVGSVAST 549
>gi|115469288|ref|NP_001058243.1| Os06g0654000 [Oryza sativa Japonica Group]
gi|113596283|dbj|BAF20157.1| Os06g0654000, partial [Oryza sativa Japonica Group]
Length = 944
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A+K++++ Q+PNIL I LKRF+ GK++K + F L L+ +M +S D
Sbjct: 267 CSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPYM--SSTDGSD 324
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+Y L+ +VH S GHY YIK+ GRWY +D V +EV ++ Y+L +
Sbjct: 325 QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLYS 384
Query: 127 RANQRP 132
R RP
Sbjct: 385 RRTARP 390
>gi|422295802|gb|EKU23101.1| hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]
Length = 526
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQ 64
+C +LV A+K++S +PN+ +QLKRF +FG K+ K +A+ E L LS +
Sbjct: 354 ACSQLVCAQKRLSFHTAPNVCTVQLKRF--MFGSRSSKLSKNVAYPESLRLSL----SGP 407
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
+ Y+L G +VH+G S + GHYY+ +K A G WY +D+ V L VL + Y+LF
Sbjct: 408 EGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLF 467
Query: 125 FIRANQRPVSA 135
+++ P A
Sbjct: 468 YVKVGPSPPPA 478
>gi|426358757|ref|XP_004046661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S + LS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHTGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSALSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|413943501|gb|AFW76150.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 944
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK +S+ Q+PNIL I LKRF+ GK++K + F L L+ +M + D
Sbjct: 380 CNDYVKARKHLSVQQAPNILTITLKRFQTGRFGKLNKRVTFPMELDLTPYM--SCTDGSD 437
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH S GHY YIK GRWY +D V V +EV ++ Y+L +
Sbjct: 438 LYDLYAVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEVHAQGAYMLLYS 497
Query: 127 RANQRPVS 134
R RP S
Sbjct: 498 RRTARPRS 505
>gi|51535049|dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
gi|51535599|dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
Length = 1069
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A+K++++ Q+PNIL I LKRF+ GK++K + F L L+ +M +S D
Sbjct: 392 CSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPYM--SSTDGSD 449
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+Y L+ +VH S GHY YIK+ GRWY +D V +EV ++ Y+L +
Sbjct: 450 QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLYS 509
Query: 127 RANQRP 132
R RP
Sbjct: 510 RRTARP 515
>gi|125556320|gb|EAZ01926.1| hypothetical protein OsI_23952 [Oryza sativa Indica Group]
Length = 1079
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A+K++++ Q+PNIL I LKRF+ GK++K + F L L+ +M +S D
Sbjct: 402 CSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPYM--SSTDGSD 459
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+Y L+ +VH S GHY YIK+ GRWY +D V +EV ++ Y+L +
Sbjct: 460 QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLYS 519
Query: 127 RANQRP 132
R RP
Sbjct: 520 RRTARP 525
>gi|336373694|gb|EGO02032.1| hypothetical protein SERLA73DRAFT_49755 [Serpula lacrymans var.
lacrymans S7.3]
Length = 337
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK V A K+ ++ +P +L + LKRF + G KI + +++ L L M + P
Sbjct: 222 CKKAVIAEKRFTVHDAPVVLTVHLKRFSPL-GRKIGHYVKYDDRLGLQPIMSEGQFGP-- 278
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G I H+G P+SGHYYA++K G+WY ND VS V + Y+LF+IR
Sbjct: 279 SYSLYGVICHAGGGPNSGHYYAHVKGGNGQWYEMNDGMVSSQRNSPVGMKNAYMLFYIR 337
>gi|164660262|ref|XP_001731254.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
gi|159105154|gb|EDP44040.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
Length = 574
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 16/134 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK------A 62
C++ V A K+ SI Q+P +L + LKRF GIFG KI+K I++ + L L +M + A
Sbjct: 324 CQRRVEATKRFSIDQAPMVLTVHLKRF-GIFGNKINKPISYSDRLHLGRYMSERDKGLGA 382
Query: 63 SQDPQP---------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQ 113
+ +P +Y+LF + H G P+ GHY A ++ A G+W +DS+VS
Sbjct: 383 DVEDEPDLGTLGAAQQYRLFAIVHHYGSGPNVGHYVASVRSADGQWLRMDDSFVSKLPQC 442
Query: 114 EVLSEKVYILFFIR 127
+ Y+LF++R
Sbjct: 443 PLDDPSAYLLFYLR 456
>gi|224143963|ref|XP_002325138.1| predicted protein [Populus trichocarpa]
gi|222866572|gb|EEF03703.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 74/120 (61%), Gaps = 2/120 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF-GGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
CK+ V A+K++++ ++P++L I LKRF G K+DK + F+ L + F+ S + +
Sbjct: 294 CKQKVRAKKRLTVHKAPHVLTIHLKRFHAHDPGRKVDKKVIFDRSLDIKPFV-SGSYEGE 352
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH G + SGHY +++ + W+ ND+ V + + VL +K Y+LF++R
Sbjct: 353 LKYSLYGVLVHYGHNTHSGHYVCFVRTSSNMWHLLNDNQVRQVSEKTVLEQKAYMLFYVR 412
>gi|431904918|gb|ELK10055.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Pteropus
alecto]
Length = 492
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ +L++ LKRF G K+ K + + E L + ++ + QD P
Sbjct: 221 CLEKVPASKTLTLHAPSEVLILVLKRFSDFTGSKLAKEVQYPEHLDMRQYL--SQQDAGP 278
Query: 69 -EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
EY+L+ +VH+G + SGHY+ YIK G+W+ +D+ V+ + LS+ Y+LF+I+
Sbjct: 279 LEYELYAVLVHAGGTCRSGHYFCYIKAGNGQWFKMDDAKVTACDVSSALSQDAYVLFYIQ 338
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKT 179
+ A + H + + + T P AE+ R T
Sbjct: 339 KRELQRDGGSVSAGEEQRCHWAERTGTRATPQEPETDSEVTGPEAEEPERGT 390
>gi|449453974|ref|XP_004144731.1| PREDICTED: uncharacterized protein LOC101219654 [Cucumis sativus]
Length = 933
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 13 VSARKQMSILQSPNILVIQLKRFEGI-FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 71
V A KQ ++ ++P +L I LKRF+ KI K I F L L+ F+ + D +Y
Sbjct: 290 VKALKQFTVHKAPYVLTIHLKRFQSYNLEEKIHKKIHFGPTLDLAPFVSGSYADGDLKYT 349
Query: 72 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
L+G +VH G S SGHYY Y++ + WY +D+ VS + V ++ Y+LF++R
Sbjct: 350 LYGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVGDRTVYEQQAYMLFYVR 405
>gi|147816255|emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera]
Length = 1043
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+ A+K++ +L++PNIL I LKRF+ GK++K++ F E L + +M + D P
Sbjct: 524 CRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNXTPYM-SGTDDRYP 582
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY ++K+ +G W+ +DS V+ L VL E Y+L +
Sbjct: 583 VYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGAYMLLY- 641
Query: 127 RANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKP 170
P++ + N SHE GK + ++ VP ATKP
Sbjct: 642 ---ASPLA----LSRNMAVSHE-GKLKMRNLEA-VPSSLAATKP 676
>gi|297735922|emb|CBI18698.3| unnamed protein product [Vitis vinifera]
Length = 669
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+ A+K++ +L++PNIL I LKRF+ GK++K++ F E L L+ +M + D P
Sbjct: 550 CRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNLTPYM-SGTDDRYP 608
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH + SGHY ++K+ +G W+ +DS V+ L VL E Y+L +
Sbjct: 609 VYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGAYMLLYA 668
Query: 127 R 127
R
Sbjct: 669 R 669
>gi|403335477|gb|EJY66914.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 783
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%), Gaps = 18/142 (12%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK---ASQ 64
+CKK A K+ SI ++P IL+I KRF+ FG K+ I + + L F + A
Sbjct: 292 NCKKKCEATKRFSIDKTPRILIIHFKRFDA-FGRKVPTFIKYPQSFSLKEFTSQSIDAKH 350
Query: 65 DP--------------QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVS 110
DP Q Y LFG +VH G SGHYY+Y K++ G WY C+DS +S S
Sbjct: 351 DPKIRQELQTNTDKNSQELYDLFGVVVHMGGGCRSGHYYSYCKNSTGNWYECDDSSISTS 410
Query: 111 TLQEVLSEKVYILFFIRANQRP 132
+ ++ L ++ Y+LF+ + Q P
Sbjct: 411 STEQALKQQAYVLFYQKRIQTP 432
>gi|354501314|ref|XP_003512737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Cricetulus griseus]
gi|344238609|gb|EGV94712.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 482
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C++ A K +++ +P +L++ L RF G K D+ +++ E ++ ++ + P
Sbjct: 287 NCRQKTMASKTLTVKDAPKVLLLVLNRFSEFTGDKKDRKVSYPESFDFQPYISQSHRQPL 346
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY+ Y+K G WY +DS V+ + VLSE Y+LF+++
Sbjct: 347 -FYSLYAVLVHDGVTCHSGHYFCYVKAGNGHWYKMDDSSVTRCDVNSVLSEPAYVLFYVQ 405
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRK 178
Q + N S H+ G+ Y + P +A E ++ K
Sbjct: 406 --QTDLRTNLWVLSQA--EHQVGESWYTTINRGSPTEAAEPPDHTENTAAK 452
>gi|328854662|gb|EGG03793.1| hypothetical protein MELLADRAFT_78495 [Melampsora larici-populina
98AG31]
Length = 717
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+L A+K++S+ ++P IL + +KRF G KI+K I F + L L++ M K + P
Sbjct: 418 CKRLRDAKKELSVHEAPPILTLHIKRF-NFRGKKINKRIQFSDSLDLNAAMDKDA--PHT 474
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS-VSTLQEVLSEKVYILFFIR 127
Y L+ + H G S SGHYY+YIK + +WY +D + V Q +++ YI F+ R
Sbjct: 475 RYNLYAVVCHQGPSNTSGHYYSYIKTSDRQWYRADDCSIDRVDRGQVFRNDEAYIFFYSR 534
>gi|255086819|ref|XP_002509376.1| predicted protein [Micromonas sp. RCC299]
gi|226524654|gb|ACO70634.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGI-FG-GKIDKAIAFEEVLVLSSFMCKASQDPQ-- 67
+ A KQ +I +P +L +QLKRFE + FG GK+ + + + L ++ M A+ +
Sbjct: 261 MTRATKQFTIDAAPLVLTVQLKRFEYVPFGRGKLTQFVEYPTSLDITGAMSDANPKARGV 320
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y LF +VH+G S SGHYY Y+K A G WY +D VS ++ + L++K Y+LF+ R
Sbjct: 321 EKYSLFAVLVHAGGSMHSGHYYCYVKAATGVWYEMDDEGVSATSERTALNQKAYLLFYAR 380
>gi|357117231|ref|XP_003560376.1| PREDICTED: uncharacterized protein LOC100846465 [Brachypodium
distachyon]
Length = 1046
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A+K +++ Q+PNIL I LKRF+ GK++K + F L L+ +M ++ D
Sbjct: 391 CSDYVKAQKHLTVHQAPNILTITLKRFQSGRYGKLNKRVTFPTKLDLTRYM--STTDGSD 448
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+Y L+ +VH S GHY YIKD GRW +D V + +EV ++ Y+L +
Sbjct: 449 QYDLYAVVVHLDMMNASYFGHYICYIKDFRGRWRKVDDCKVMIVDEEEVHAQGAYMLLYS 508
Query: 127 RANQRP 132
R RP
Sbjct: 509 RRTARP 514
>gi|330822492|ref|XP_003291685.1| hypothetical protein DICPUDRAFT_6348 [Dictyostelium purpureum]
gi|325078121|gb|EGC31790.1| hypothetical protein DICPUDRAFT_6348 [Dictyostelium purpureum]
Length = 328
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQDPQPE 69
LV A K + I SP +L +Q+KRF + +GGK +K I F + L LS +M + +
Sbjct: 213 LVKAEKSLQIEISPPVLTVQIKRFSFLNSYGGKDNKHIQFCQTLDLSPYMTQT--NDHSI 270
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L +VH G S +SGHYY Y+K + G WY +DS VS +LQ VL K Y+LF+ +
Sbjct: 271 YDLNSVLVHLGDSTNSGHYYCYVKGSNGVWYKMDDSMVSQVSLQTVLRSKAYMLFYTK 328
>gi|380012929|ref|XP_003690525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
florea]
Length = 884
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ V A KQ S+ + P +L +QLKRF + GGKI K I F++ + + ++ K +P
Sbjct: 311 ACKRRVPATKQFSLERPPKVLCVQLKRF-SVLGGKISKHIGFKQTIDMGPYLWKEPGEPS 369
Query: 68 PE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
YKL + H G S + GHY A K + G++Y +DS V +L VLS YI+ F
Sbjct: 370 QSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSLSNVLSTNAYIMIF 429
>gi|344297603|ref|XP_003420486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 621
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K +++ P LV+ LKRF + G K K + + L +S C + QD P
Sbjct: 253 CQRKMPASKTLTLHTCPEALVLVLKRFSDLSGDKNAKQVRYPASLDVSR--CLSRQDGGP 310
Query: 69 E-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+ +VH G++ +GHY +Y+K G+WY +D+ VS + VLS++ Y LF+I
Sbjct: 311 AAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFYIH 370
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
++ V +G A G + A +G + VP
Sbjct: 371 QSEL-VRGSGGVARGGASGGHGMEAADEGPRPGVP 404
>gi|340508861|gb|EGR34476.1| hypothetical protein IMG5_010250 [Ichthyophthirius multifiliis]
Length = 347
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK LV K I + PNIL IQLKRF F K++K F + L + ++
Sbjct: 203 CKNLVDCSKGYVIQKFPNILTIQLKRFNN-FMMKVNKHTQFAPTINLKKY---STNQKDQ 258
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y L+G ++H G + GHYY Y K +WYC NDS V+ + QEV +EK ++LF+
Sbjct: 259 IYDLYGILIHVGHDLNYGHYYCYTKSPNKQWYCMNDSSVNQVSFQEVQNEKAFLLFY 315
>gi|344297597|ref|XP_003420483.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Loxodonta africana]
Length = 529
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K +++ P LV+ LKRF + G K K + + L +S C + QD P
Sbjct: 253 CQRKMPASKTLTLHTCPEALVLVLKRFSDLSGDKNAKQVRYPASLDVSR--CLSRQDGGP 310
Query: 69 E-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+ +VH G++ +GHY +Y+K G+WY +D+ VS + VLS++ Y LF+I
Sbjct: 311 AAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFYIH 370
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
++ V +G A G + A +G + VP
Sbjct: 371 QSEL-VRGSGGVARGGASGGHGMEAADEGPRPGVP 404
>gi|344297599|ref|XP_003420484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 529
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K +++ P LV+ LKRF + G K K + + L +S C + QD P
Sbjct: 253 CQRKMPASKTLTLHTCPEALVLVLKRFSDLSGDKNAKQVRYPASLDVSR--CLSRQDGGP 310
Query: 69 E-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+ +VH G++ +GHY +Y+K G+WY +D+ VS + VLS++ Y LF+I
Sbjct: 311 AAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFYIH 370
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
++ V +G A G + A +G + VP
Sbjct: 371 QSEL-VRGSGGVARGGASGGHGMEAADEGPRPGVP 404
>gi|344297595|ref|XP_003420482.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
gi|344297601|ref|XP_003420485.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 529
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K +++ P LV+ LKRF + G K K + + L +S C + QD P
Sbjct: 253 CQRKMPASKTLTLHTCPEALVLVLKRFSDLSGDKNAKQVRYPASLDVSR--CLSRQDGGP 310
Query: 69 E-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+ +VH G++ +GHY +Y+K G+WY +D+ VS + VLS++ Y LF+I
Sbjct: 311 AAYRLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFYIH 370
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
++ V +G A G + A +G + VP
Sbjct: 371 QSEL-VRGSGGVARGGASGGHGMEAADEGPRPGVP 404
>gi|115449203|ref|NP_001048381.1| Os02g0795000 [Oryza sativa Japonica Group]
gi|47497222|dbj|BAD19267.1| putative hematopoietic-specific IL-2 deubiquitinating enzyme [Oryza
sativa Japonica Group]
gi|113537912|dbj|BAF10295.1| Os02g0795000 [Oryza sativa Japonica Group]
Length = 1185
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFG-GKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C++ V A+K+ I ++P++L I LKRF KIDK + F+ L L ++ + +
Sbjct: 271 CRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQFQPTLNLKPYVSNP-EGME 329
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 330 FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNKVYQVREADVLRQKAYMLFYVR 389
Query: 128 ANQR 131
R
Sbjct: 390 DRTR 393
>gi|218191741|gb|EEC74168.1| hypothetical protein OsI_09271 [Oryza sativa Indica Group]
Length = 1156
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFG-GKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C++ V A+K+ I ++P++L I LKRF KIDK + F+ L L ++ + +
Sbjct: 270 CRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPCHKIDKKVQFQPTLNLKPYVSNP-EGME 328
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+G +VH+G++ SGHYY +++ + G W+ +D+ V +VL +K Y+LF++R
Sbjct: 329 FKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNEVYQVREADVLRQKAYMLFYVR 388
Query: 128 ANQR 131
R
Sbjct: 389 DRTR 392
>gi|379030637|ref|NP_001243803.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4
[Homo sapiens]
gi|187663999|sp|A6NCW7.3|U17L4_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 4
Length = 530
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S G+Y++Y+K G+WY +D+ V+V ++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
Length = 756
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V A KQ +I +P L + LKRF FGGKI + +AF+E L ++ ++ + P
Sbjct: 393 CKRKVDATKQFTIETAPPALTVHLKRFS-PFGGKISRQVAFDEKLNIAPYLS-VNHGPV- 449
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS-VSTLQEVLSEKVYILFFIR 127
YKL+ + H G P+SGHY A ++ G+W +DS+VS + + + + YILF+++
Sbjct: 450 RYKLYAVVHHYGSGPNSGHYVASVRSPFGKWTRMDDSHVSEMGSSGPLGDQSAYILFYLK 509
>gi|34324152|gb|AAN10252.1| deubiquitinating enzyme [Mus musculus]
Length = 526
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +P +L++ L RF G K+D+ +++ E L L ++ + + P P
Sbjct: 230 CRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI-R 127
Y L+ +VH G + SGHY+ +K G+WY +D+ V+ + VL+E Y+L ++ +
Sbjct: 290 -YTLYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLSYVQQ 348
Query: 128 ANQRPVSAN 136
AN + VS +
Sbjct: 349 ANLKQVSID 357
>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 503
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C K +A K + + S N+L+ LKRF G KI + + + E L + +M + S P
Sbjct: 233 CLKKTAASKTLVLQSSGNVLIFVLKRFSDFTGEKIARQVQYPECLDMRPYMSQQSGRPL- 291
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
EY L+ +VH G GHY+ Y+K G WY +D+ V+ + VL++ Y+LF+++
Sbjct: 292 EYVLYAALVHVGLRCQKGHYFCYVKAGNGHWYKMDDAKVTACDITSVLNQSAYVLFYVQK 351
Query: 129 NQ 130
++
Sbjct: 352 SE 353
>gi|67594014|ref|XP_665769.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656592|gb|EAL35536.1| hypothetical protein Chro.80498, partial [Cryptosporidium hominis]
Length = 671
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMC-KASQD 65
C + A KQ+ I + P +L IQLKRF + G K +KAI F +VL L ++ K +
Sbjct: 310 CNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQPYISSKTYSE 369
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE--KVYIL 123
YKL+ + HSG + GHYY + K +WYC ND YV + ++ VL+E K Y+L
Sbjct: 370 SSYIYKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFNDDYVKPTRIENVLNENHKAYLL 429
Query: 124 FFIRAN 129
F+ R++
Sbjct: 430 FYYRSD 435
>gi|335302607|ref|XP_003359505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Sus scrofa]
Length = 517
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K++++ ++ +L++ LKRF + G K+DK + + E L L ++ +
Sbjct: 246 CLRKGPATKRLTLHRASKVLILVLKRFTDVTGDKMDKKVRYPEHLDLQPYL-SVQKAGAL 304
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
+Y+LF +VHSG++ GHY+ YI+ G WY +DS V+ LS+ Y+LF+I+
Sbjct: 305 DYELFAVLVHSGWTCHQGHYFCYIRAGNGWWYRMDDSKVTACDTASALSQSAYVLFYIQR 364
Query: 129 NQRPVSANGTFASNGVKS 146
+ + G A +S
Sbjct: 365 GELERATGGASADRAPRS 382
>gi|402912282|ref|XP_003918703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
gi|402912555|ref|XP_003918822.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|402912553|ref|XP_003918821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|109085555|ref|XP_001084204.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Macaca mulatta]
Length = 529
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY +++K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYLSFVKAPGGQWYKMDDAKVTACSIASVLSQQAYVLFYIQK 375
Query: 129 NQ 130
+Q
Sbjct: 376 SQ 377
>gi|149742816|ref|XP_001494472.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Equus
caballus]
Length = 535
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C K V A K +++ S +L++ LKRF G K+ K + + E L + +M + + P
Sbjct: 257 CLKKVPASKTLTLHTSSKVLMLLLKRFSNFTGSKMPKDVQYPEYLDMQQYMSQQNSGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY+ YIK G+WY +D+ V+ + LS+ Y+LF+I+
Sbjct: 316 LYVLYAVLVHAGWSCHNGHYFCYIKAGNGQWYKMDDAKVTACDVTSALSQCAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|402877470|ref|XP_003902449.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 331
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 80 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPLV 139
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 140 -YVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 198
Query: 129 NQ 130
++
Sbjct: 199 SE 200
>gi|340716721|ref|XP_003396843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
terrestris]
Length = 875
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ V A KQ S+ + P +L +QLKRF + GGKI K I F++ + + ++ K +P
Sbjct: 311 ACKRRVPATKQFSLERPPKVLCVQLKRF-SVLGGKISKHIGFKQTIDMGPYLWKEPGEPT 369
Query: 68 PE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
YKL + H G S + GHY A K + G++Y +DS V +L V S YI+ F
Sbjct: 370 QSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSLSNVFSTNAYIMIF 429
>gi|427789071|gb|JAA59987.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
Length = 625
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 7 FSCKKLVSARK----QMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCK 61
C+ SAR Q+ + ++P +L + LKRF+ G K+ K + F L L+ F C+
Sbjct: 494 LHCEGCKSARAAASLQLQVFEAPRVLTLHLKRFQQGATLRKVQKHVPFPVELDLTPFCCR 553
Query: 62 ASQDPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 120
++ P Y L+G + H+G GHY AY++ A G+W+ +DS V +T Q VL+ +
Sbjct: 554 DAEMKAPATYILYGVVEHAGRM-TGGHYTAYVRGASGKWFHASDSRVVPATQQNVLASQA 612
Query: 121 YILFFIRAN 129
Y+LF+ RA+
Sbjct: 613 YLLFYCRAD 621
>gi|297303100|ref|XP_002806114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Macaca mulatta]
Length = 347
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 156 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 215
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 216 -YVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 274
Query: 129 NQ 130
+Q
Sbjct: 275 SQ 276
>gi|350421826|ref|XP_003492969.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
impatiens]
Length = 875
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ V A KQ S+ + P +L +QLKRF + GGKI K I F++ + + ++ K +P
Sbjct: 311 ACKRRVPATKQFSLERPPKVLCVQLKRF-SVLGGKISKHIGFKQTIDMGPYLWKEPGEPT 369
Query: 68 PE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
YKL + H G S + GHY A K + G++Y +DS V +L V S YI+ F
Sbjct: 370 QSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSLSNVFSTNAYIMIF 429
>gi|307169377|gb|EFN62098.1| Ubiquitin carboxyl-terminal hydrolase 42 [Camponotus floridanus]
Length = 785
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDP 66
+CK+ V A KQ ++ + P +L +QLKRF + GGKI + I F++ + +S ++ + + P
Sbjct: 208 ACKRRVPATKQFTLERPPKVLCVQLKRF-SVLGGKISRHIGFKQTIDMSPYLWREPGESP 266
Query: 67 QP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+P YKL + H G S + GHY A + + G++Y +D V +L VLS YI+ F
Sbjct: 267 RPLTYKLMSMVTHMGPSVNCGHYTAIAQVSSGQYYSFDDCCVRPISLNNVLSTNAYIMIF 326
Query: 126 IRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPL------KAVATKPSA 172
N S + + NG + K + T PL K++A K S
Sbjct: 327 EMENYNQNSPS--------TAKVNGTTSVKNIVSTTPLSNSIINKSIALKAST 371
>gi|449490903|ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 23-like [Cucumis sativus]
Length = 898
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 13 VSARKQMSILQSPNILVIQLKRFEGI-FGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 71
V A KQ ++ ++P +L I LKRF+ KI K I F L L+ F+ S D +Y
Sbjct: 290 VKALKQFTVHKAPYVLTIHLKRFQSYNLEEKIHKKIHFGPTLDLAPFV-SGSYDGDLKYT 348
Query: 72 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
L+G +VH G S SGHYY Y++ + WY +D+ VS + V ++ Y+LF++R
Sbjct: 349 LYGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVGDRTVYEQQAYMLFYVR 404
>gi|242096572|ref|XP_002438776.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
gi|241916999|gb|EER90143.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
Length = 979
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 4/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK +S+ Q+PNIL I LKRF+ GK++K + F L L+ + + D
Sbjct: 374 CNDYVKARKHLSVHQAPNILTITLKRFQSGRFGKLNKRVTFPMELDLTPY--TSCTDGSD 431
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH S GHY YIK GRWY +D V V +EV ++ Y+L +
Sbjct: 432 LYDLYAVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEVHAQGAYMLLYS 491
Query: 127 RANQRP 132
R RP
Sbjct: 492 RRTARP 497
>gi|326524007|dbj|BAJ97014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1026
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARK +++ Q+PNIL I LKRF+ GK++K + F L L+ +M ++ D
Sbjct: 322 CNDYVKARKHLTVHQAPNILTITLKRFQSGRFGKLNKKVTFPTTLDLTPYM--STTDGTD 379
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+Y L+ +VH S GHY YIK G W +D V +EV ++ Y+L +
Sbjct: 380 QYDLYAVVVHLDMLNASFFGHYICYIKHHRGCWLKIDDCKVMAVDEEEVHAQGAYMLLYS 439
Query: 127 RANQRPV 133
R RPV
Sbjct: 440 RRTPRPV 446
>gi|209876007|ref|XP_002139446.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
gi|209555052|gb|EEA05097.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
Length = 757
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 78/150 (52%), Gaps = 21/150 (14%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKA---- 62
C+K A K++ I + P +L IQLKRF I G K K+I + EVL +SS+M
Sbjct: 304 CEKKSDASKEVLIEKLPPLLTIQLKRFSFIGHGNRKPYKSIKYNEVLDMSSYMTTKNTCN 363
Query: 63 SQDPQPE-----------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVST 111
SQ P+ Y L+ + HSG S GHYY Y K +WYC ND V +S
Sbjct: 364 SQVYTPDNSLDTCRQSFIYDLWSVVCHSGGSLSGGHYYTYAKGLNNQWYCFNDETVRISK 423
Query: 112 LQEVLSEKV--YILFFIRANQRPVSANGTF 139
EVLSE + Y+LF+ + NQ + N TF
Sbjct: 424 SSEVLSETIGAYLLFYAQRNQ--LQFNETF 451
>gi|426358881|ref|XP_004046718.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Gorilla gorilla gorilla]
Length = 414
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 141 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 200
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+ +GHY++Y+K G+WY +D+ V+ S + LS++ Y+LF+I+
Sbjct: 201 -YVLYAVLVHAGWICHNGHYFSYVKAQEGQWYKMDDAEVTASGITSALSQQAYVLFYIQK 259
Query: 129 NQ 130
++
Sbjct: 260 SE 261
>gi|307193249|gb|EFN76140.1| Ubiquitin carboxyl-terminal hydrolase 36 [Harpegnathos saltator]
Length = 874
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 7/145 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDP 66
+CK+ V A KQ ++ + P +L +QLKRF + GGKI + I F++ + +S ++ + + P
Sbjct: 311 ACKRRVPATKQFTLERPPKVLCVQLKRF-SVGGGKISRHIGFKQTIDMSRYLWREPGESP 369
Query: 67 -QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Q YKL + H G S + GHY A + + G++Y +D+ V +L VLS YI+ F
Sbjct: 370 KQLTYKLMSVVTHMGPSVNCGHYTAIAQVSSGQYYTFDDACVRPISLNNVLSTNAYIMIF 429
Query: 126 ----IRANQRPVSANGTFASNGVKS 146
NQ+ NGT ++ V +
Sbjct: 430 EMNSSSQNQQTAKVNGTTSAKSVST 454
>gi|71657312|ref|XP_817173.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
gi|70882348|gb|EAN95322.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
Length = 465
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 72/120 (60%), Gaps = 13/120 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++L + + + I++ P ILV+ LKRF+ G K + + F E SFM + D P
Sbjct: 353 CRRLRNGTRSVKIIRWPKILVLHLKRFDDT-GKKNSEPVVFPE-----SFM---THDNSP 403
Query: 69 -EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE--KVYILFF 125
+Y+L+G + HSG S + GHY +Y++ GRWY CND+ +S+ST+ E + YILF+
Sbjct: 404 MQYQLYGVVCHSG-SENWGHYTSYVRTLSGRWYHCNDAVISLSTVTEAMQALTTAYILFY 462
>gi|426343802|ref|XP_004038475.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like, partial [Gorilla gorilla gorilla]
Length = 387
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + P
Sbjct: 257 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLVKNVQYPECLDMQPYMSQQITGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S + LS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSALSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|402913327|ref|XP_003919158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 392
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|402912436|ref|XP_003918772.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+ +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|379030635|ref|NP_001243802.1| putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1
[Homo sapiens]
gi|74723224|sp|Q7RTZ2.1|U17L1_HUMAN RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase
17-like protein 1; AltName: Full=Deubiquitinating enzyme
17-like protein 1; AltName: Full=Ubiquitin thioesterase
17-like protein 1; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 1
gi|33186790|tpe|CAD66056.1| TPA: ubiquitin-specific protease 17-like protein [Homo sapiens]
Length = 530
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S GHY++Y+K +WY +D+ V+V ++ VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|402912993|ref|XP_003919017.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+ +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
CCMP2712]
Length = 347
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDPQPEYK 71
A K+ S+ ++P +L + LKRFE + G K+ K + FE+ L L +M + + Y
Sbjct: 232 ATKRFSVHRAPLVLQLHLKRFETSWSGNSCKLSKHVMFEQTLQLDPYMSEG-EKAGSRYN 290
Query: 72 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
L+G +VHSG S SGHYYA++K++ G WY +D V + V ++ Y+LF+++
Sbjct: 291 LYGVVVHSGHSMKSGHYYAFVKNSNGVWYEMDDDSVRQVSYSAVARQQAYMLFYVQ 346
>gi|407860773|gb|EKG07488.1| ubiquitin hydrolase, putative,cysteine peptidase, Clan CA, family
C19, putative [Trypanosoma cruzi]
Length = 465
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++L + + + I++ P ILV+ LKRF+ G K + + F E SFM + Q
Sbjct: 353 CRRLRNGTRSVKIIRWPKILVLHLKRFDDT-GKKNSEPVVFPE-----SFMTHGNSPMQ- 405
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE--KVYILFF 125
Y+L+G + HSG S + GHY +Y++ GRWY CND+ +S+ST+ E + YILF+
Sbjct: 406 -YQLYGVVCHSG-SENWGHYTSYVRTLSGRWYHCNDAVISLSTVTEAMQALTTAYILFY 462
>gi|357485233|ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 715
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 70/123 (56%), Gaps = 4/123 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSF-MCKASQ 64
C + VS KQ+ + Q+P+I LKRF+ + KIDK I F L L + + S
Sbjct: 327 CNEEVSVEKQLMLDQTPSIAAFHLKRFKTVGNNAVEKIDKHINFPLELDLQPYTILNESD 386
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
+ +Y L+ +VH+G S DSGHY+ +++ A W+ +DS V+ + VLS++ YILF
Sbjct: 387 NASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVTKVSEGTVLSQEAYILF 446
Query: 125 FIR 127
+ R
Sbjct: 447 YAR 449
>gi|402912765|ref|XP_003918915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 400
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDVQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY +Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|71416106|ref|XP_810096.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
gi|70874578|gb|EAN88245.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
Length = 465
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++L + + + I++ P ILV+ LKRF+ G K + + F E SFM + Q
Sbjct: 353 CRRLRNGTRSVKIIRWPKILVLHLKRFDDT-GKKNSEPVVFPE-----SFMTHGNSPMQ- 405
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE--KVYILFF 125
Y+L+G + HSG S + GHY +Y++ GRWY CND+ +S+ST+ E + YILF+
Sbjct: 406 -YQLYGVVCHSG-SENWGHYTSYVRTFSGRWYYCNDAVISLSTVTEAMQALTTAYILFY 462
>gi|379030626|ref|NP_001243798.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7
[Homo sapiens]
gi|187653908|sp|P0C7H9.1|U17L7_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 7
Length = 530
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + + + +M + + P
Sbjct: 257 CLQKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLV 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +D+ V+ S + VLS++ Y+LF+I+
Sbjct: 317 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|343427156|emb|CBQ70684.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Sporisorium
reilianum SRZ2]
Length = 761
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 4/120 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ V A KQ +I +P L + LKRF FGGK+ + I F+E L ++ ++ ++ P
Sbjct: 391 CKRKVDATKQFTIEAAPPALTVHLKRFTA-FGGKVSRQINFDESLNIAPYLS-VNRGPA- 447
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK-VYILFFIR 127
YKL+ + H G P+SGHY A ++ G+W +DS VS L+++ YILF+++
Sbjct: 448 RYKLYAVVHHYGSGPNSGHYVASVRSPSGKWTRMDDSLVSEMGRSGPLNDQSAYILFYMK 507
>gi|357517045|ref|XP_003628811.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355522833|gb|AET03287.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 737
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKAS--Q 64
C + V+ KQ+ + ++P++ LKRF +G KIDK + F + L L + C +S
Sbjct: 384 CNQEVTMEKQLMLDKAPSVAAFHLKRFLKDGDSVKKIDKYVDFSKELDLKPYTCGSSSGD 443
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
+ +Y+L+ + H G SP+SGHY+++++ A +WY +D VS + +EVL+ K YILF
Sbjct: 444 NVLLKYELYAVVEHRGPSPNSGHYFSFVRSAPDKWYLMDDDKVSSVSEEEVLNRKAYILF 503
Query: 125 F 125
+
Sbjct: 504 Y 504
>gi|357451869|ref|XP_003596211.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355485259|gb|AES66462.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 983
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 79/165 (47%), Gaps = 46/165 (27%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF----------------------------EGIFG 40
C V ARKQ+SI ++PNIL I LKRF EG +G
Sbjct: 650 CTAYVRARKQLSIHEAPNILTIVLKRFQIPNNVLNFIIFFILTLRNISCFVLCHQEGRYG 709
Query: 41 GKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH-----SGFSPDSGHYYAYIKDA 95
KI+K I F E+L + FM P P Y L+ +VH + FS GHY +Y+KD
Sbjct: 710 -KINKCITFPEMLDMIPFMTGTGDIP-PLYVLYAVVVHLDTLNASFS---GHYVSYVKDL 764
Query: 96 IGRWYCCNDSYVSV--------STLQEVLSEKVYILFFIRANQRP 132
G W+ +D+ V + + +V+SE YILF+ R++ RP
Sbjct: 765 QGNWFRIDDTEVMLLPCLQVQPVLVNQVMSEGAYILFYTRSSPRP 809
>gi|379030633|ref|NP_001243801.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8
[Homo sapiens]
gi|187653909|sp|P0C7I0.1|U17L8_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 8
Length = 530
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 74/122 (60%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQRAPASNTLTLHTSAKVLILVLKRFCDVTGNKLAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +G+Y++Y+K G+WY +D+ V+ ++ VLS++ Y+LF+I+
Sbjct: 316 VYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLFYIQK 375
Query: 129 NQ 130
++
Sbjct: 376 SE 377
>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I ++PN+L I LKRF+ GK++K + F E L LS +M + D
Sbjct: 367 CNDYVKAWKRLTIQRAPNVLTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSEKG-DGAD 425
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ +VH S GHY Y KD G W+ +DS VS L EVLS+ Y+L +
Sbjct: 426 VYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDSKVSSVELDEVLSQGAYMLLYS 485
Query: 127 R 127
R
Sbjct: 486 R 486
>gi|344257555|gb|EGW13659.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 306
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 10/192 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ A K ++I + +L++ L R GGK D+ + + E L L +M ++++ P
Sbjct: 115 CQEKTPALKSLAIQGASKVLLLVLNRSSDSAGGKTDRKVRYPESLDLRPYMSQSNRGPLV 174
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G + SGHY+ Y++ G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 175 -YALYAVLVHAGATCHSGHYFCYVRAGNGKWYKMDDSTVTRCEVASVLSESAYLLFYVQG 233
Query: 129 N-------QRPV-SANGTFASNGVKSHENGKEAYKGVK-GTVPLKAVATKPSAEQSSRKT 179
RPV + N A G + + + + P +A A S +Q
Sbjct: 234 TDGRGDSVNRPVGTGNKAHAGKGWQKKHKRRSCVQAAEPRREPEEAAAQAKSLDQWKHDF 293
Query: 180 PSTISKVEKVPS 191
S +S + +V S
Sbjct: 294 ISILSILGRVDS 305
>gi|291411125|ref|XP_002721843.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 500
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 113/242 (46%), Gaps = 25/242 (10%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C++ +A K +++ + +L+ LKRF G K+ + + E L + +M + + P
Sbjct: 228 TCRQKTAASKTLTLQSAGKVLLFVLKRFSEFTGEKLGGQVHYPECLDMRPYMSQQNGRPL 287
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+ +VH G SGHY+ Y+K G WY +D+ V+ VL++ Y+LF++R
Sbjct: 288 -DYVLYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDTTCVLNQSAYVLFYVR 346
Query: 128 --------ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKT 179
P + + H G+ ++ PL+A ++ EQ+++
Sbjct: 347 KSGVGGEHGTVSPGRGPSDLEAANTRGHTPGE-----LERPSPLEAGESEEHLEQTTQDL 401
Query: 180 PSTISKVEKVPSNPRLKFSISGSSGCKGVPPT--SNGKVNVHKSQSVKMNGVVKDSVPKE 237
+ + S PR FS+ + V PT SN V +H+++S G+ K +E
Sbjct: 402 TLDAWQALQAQSRPRSAFSL------RTVEPTLPSNAIV-IHQARSAA--GMRKHHPDQE 452
Query: 238 KS 239
++
Sbjct: 453 RA 454
>gi|328777507|ref|XP_001120426.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
mellifera]
Length = 884
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ V A KQ S+ + P +L +QLKRF + GGKI K I F++ + + ++ K +
Sbjct: 311 ACKRRVPATKQFSLERPPKVLCVQLKRF-SVLGGKISKHIGFKQTIDMGPYLWKEPGESS 369
Query: 68 PE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
YKL + H G S + GHY A K + G++Y +DS V +L VLS YI+ F
Sbjct: 370 QSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSLSNVLSTNAYIMIF 429
>gi|195588034|ref|XP_002083763.1| GD13899 [Drosophila simulans]
gi|251765135|sp|B4QIS3.1|UBP36_DROSI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194195772|gb|EDX09348.1| GD13899 [Drosophila simulans]
Length = 988
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK--ASQDP 66
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + + A+Q
Sbjct: 266 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKPRIDLSKYAARSPAAQAQ 324
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV T+Q V + YI+FF
Sbjct: 325 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPITMQNVCNTNAYIMFF 383
>gi|66361578|ref|XP_627322.1| ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase
fold [Cryptosporidium parvum Iowa II]
gi|46228703|gb|EAK89573.1| ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase
fold [Cryptosporidium parvum Iowa II]
Length = 765
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDP 66
C + A KQ+ I + P +L IQLKRF + G K +KAI F +VL L +M +
Sbjct: 310 CNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPNKAINFSDVLDLQPYMSSKTYSE 369
Query: 67 QPE----------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 116
YKL+ + HSG + GHYY + K +WYC ND YV + ++ VL
Sbjct: 370 SKVSSSKSESSYIYKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFNDDYVKPTRIENVL 429
Query: 117 SE--KVYILFFIRAN 129
+E K Y+LF+ R++
Sbjct: 430 NENHKAYLLFYYRSD 444
>gi|224089481|ref|XP_002308728.1| predicted protein [Populus trichocarpa]
gi|222854704|gb|EEE92251.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K+++I ++PN+L I LKRF+ GK++K + F E+L LS +M + D
Sbjct: 367 CNDYVKAWKRLTIQRAPNVLTIALKRFQSGRFGKLNKRVTFPEMLDLSPYMSEGG-DGTD 425
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ +VH S GHY Y KD G W+ +D VS L EVLS+ Y+L +
Sbjct: 426 VYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDCKVSSVELDEVLSQGAYMLVYS 485
Query: 127 R 127
R
Sbjct: 486 R 486
>gi|407408066|gb|EKF31633.1| ubiquitin hydrolase [Trypanosoma cruzi marinkellei]
Length = 465
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 70/119 (58%), Gaps = 11/119 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++L + + + I++ P ILV+ LKRF+ G K + + F E SFM + Q
Sbjct: 353 CRRLRNGTRSVKIIRWPKILVLHLKRFDDT-GKKNSEPVVFPE-----SFMTHGNSSVQ- 405
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE--KVYILFF 125
Y+L+G + HSG S + GHY +Y++ GRWY CND+ +++ST+ E + YILF+
Sbjct: 406 -YQLYGVVCHSG-SENWGHYTSYVRVLSGRWYHCNDAVITLSTVTEAMQALTTAYILFY 462
>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ailuropoda melanoleuca]
Length = 531
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C V A K +++ +L++ LKRF G K+ K + + E L + ++C+ P
Sbjct: 256 TCLGKVPASKMLTLHTPSKVLILVLKRFSDFTGNKMAKDVHYPEHLDMQPYLCEQRAGPL 315
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G+S SGHY+ ++K G+WY +DS V+ LS+ Y+LF+I+
Sbjct: 316 -VYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDATCALSQHAYVLFYIQ 374
Query: 128 ANQ 130
+
Sbjct: 375 KTE 377
>gi|118395227|ref|XP_001029966.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89284248|gb|EAR82303.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 2334
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 11 KLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEY 70
K A + +I PN++VI++ RF I KI K I F+ L L + P Y
Sbjct: 1708 KYQKAIRTANIYNFPNVMVIKINRFYEIM--KIQKNIEFKTELNLQEYSLSKQYSPATNY 1765
Query: 71 KLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 130
L+ I H G GHYY+YIKD+ W+C NDS V +L E+ ++ Y+LF+I+ Q
Sbjct: 1766 ILYAMITHQGSVAWGGHYYSYIKDSSENWFCMNDSSVKQVSLNEMRNDPPYLLFYIK--Q 1823
Query: 131 RP 132
P
Sbjct: 1824 EP 1825
>gi|291411123|ref|XP_002721842.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 113/242 (46%), Gaps = 25/242 (10%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C++ +A K +++ + +L+ LKRF G K+ + + E L + +M + + P
Sbjct: 258 TCRQKTAASKTLTLQSAGKVLLFVLKRFSEFTGEKLGGQVHYPECLDMRPYMSQQNGRPL 317
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+ +VH G SGHY+ Y+K G WY +D+ V+ VL++ Y+LF++R
Sbjct: 318 -DYVLYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDTTCVLNQSAYVLFYVR 376
Query: 128 --------ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKT 179
P + + H G+ ++ PL+A ++ EQ+++
Sbjct: 377 KSGVGGEHGTVSPGRGPSDLEAANTRGHTPGE-----LERPSPLEAGESEEHLEQTTQDL 431
Query: 180 PSTISKVEKVPSNPRLKFSISGSSGCKGVPPT--SNGKVNVHKSQSVKMNGVVKDSVPKE 237
+ + + PR FS+ + V PT SN V +H+++S G+ K +E
Sbjct: 432 TLDAWQALQAQNTPRSAFSL------RTVEPTLPSNAIV-IHQARSAA--GMRKHHPDQE 482
Query: 238 KS 239
++
Sbjct: 483 RA 484
>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +L++ L R G K+++ +++ E L L ++ + + P P
Sbjct: 230 CREKMPASKTTKVQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY+ Y+K + G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 290 -YALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 347
>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +L++ L R G K+++ +++ E L L ++ + + P P
Sbjct: 230 CREKMPASKTTKVQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLP 289
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY+ Y+K + G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 290 -YALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 347
>gi|302774793|ref|XP_002970813.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
gi|300161524|gb|EFJ28139.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
Length = 419
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A+K++S+ ++PNIL I LKRF+G GKI+K + F E L + +M + D P
Sbjct: 300 CNAYVRAKKRLSVHEAPNILTIALKRFQGGKFGKINKKVTFPEELDMVPYM-SGTVDTPP 358
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
YKL+ +VH S GHY Y++ G W+ +DS V V+S+K Y+L +
Sbjct: 359 AYKLYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVKEVDQIRVMSQKAYMLLYR 418
Query: 127 R 127
R
Sbjct: 419 R 419
>gi|402912520|ref|XP_003918809.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 332
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 72/122 (59%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K ++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 109 CLQKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLV 168
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+ +GHY +Y+K G+WY +D+ ++ ++ VLS++ Y+LF+I+
Sbjct: 169 -YVLYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEITACSIASVLSQQAYVLFYIQK 227
Query: 129 NQ 130
++
Sbjct: 228 SE 229
>gi|392337921|ref|XP_001074389.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase DUB-1 [Rattus norvegicus]
Length = 549
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +L++ L R G K+++ +++ E L L ++ + + P P
Sbjct: 275 CREKMPASKTTKVQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLP 334
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY+ Y+K + G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 335 -YALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 392
>gi|332027218|gb|EGI67307.1| Ubiquitin carboxyl-terminal hydrolase 36 [Acromyrmex echinatior]
Length = 874
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDP 66
+CK+ V A KQ ++ + P +L +QLKRF GGKI + I F++ + + ++ + + P
Sbjct: 310 ACKRRVPATKQFTLERPPKVLCVQLKRF-SYLGGKISRHIGFKQTIDMGQYLWREPGESP 368
Query: 67 -QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Q YKL + H G S + GHY A + + G++Y +DS V +L VLS YI+ F
Sbjct: 369 KQLTYKLMSMVTHMGPSVNCGHYTAIAQVSSGQYYSFDDSCVRPISLNNVLSTNAYIMIF 428
Query: 126 IRAN----QRPVSANGTFAS 141
N Q+ NGT ++
Sbjct: 429 EMENDSQTQQTAKMNGTTSA 448
>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
[Rattus norvegicus]
Length = 832
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C++ + A K + + +L++ L R G K+++ +++ E L L ++ + + P P
Sbjct: 558 CREKMPASKTTKVQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLP 617
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH G + SGHY+ Y+K + G+WY +DS V+ + VLSE Y+LF+++
Sbjct: 618 -YALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 675
>gi|297468710|ref|XP_002706267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 763
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 269 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 327
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 328 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|444520452|gb|ELV13004.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Tupaia
chinensis]
Length = 442
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF G K KA+ + E L + ++ + ++ P
Sbjct: 173 CLERRLASKTLTLHASSKVLILVLKRFSDFTGEKTTKAVQYPECLDMQTYTSEQNRGPLI 232
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G S +GHY+ YIK G+WY +D+ V+ + VLS+ Y+LF+++
Sbjct: 233 -YGLYAVLVHAGSSCHNGHYFCYIKAGNGQWYKMDDAEVTACDVTVVLSQPAYVLFYVQK 291
Query: 129 NQ 130
N+
Sbjct: 292 NE 293
>gi|332244569|ref|XP_003271445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Nomascus leucogenys]
Length = 399
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + G K+ K + + E L + +M + + P
Sbjct: 257 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPL- 315
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G+S +GHY++Y+K G+WY + V+ S + VLS++ Y LF+I+
Sbjct: 316 VYVLYAVLVHAGWSGHNGHYFSYVKAQEGQWYKMDGDQVTASGITSVLSQQAYDLFYIQ 374
>gi|449679016|ref|XP_002157785.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like, partial
[Hydra magnipapillata]
Length = 372
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C+ A+K+ SI + PN+L +QLKRF+ +FGGKI K + F E L + FM A P
Sbjct: 284 CRMKTVAQKRNSIYKEPNVLTLQLKRFDFTNMFGGKISKNVVFPEELDIRPFMSVAQNYP 343
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIK 93
YKL+ +VHSGFS +SGHYY Y+K
Sbjct: 344 LL-YKLYAVLVHSGFSCNSGHYYCYVK 369
>gi|255573501|ref|XP_002527676.1| conserved hypothetical protein [Ricinus communis]
gi|223532981|gb|EEF34747.1| conserved hypothetical protein [Ricinus communis]
Length = 753
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 74/126 (58%), Gaps = 8/126 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK+ S KQ+ + Q+P++ + LKRF +G F KIDK + F L L + K+SQD
Sbjct: 367 CKEEGSREKQLMLDQAPSVSALHLKRFKTDGSFIEKIDKHVEFPLELNLKPYT-KSSQDC 425
Query: 67 QP-----EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
+Y+L+ +VH+G SP SGHY+ +++ + W+ +D V +EVLS+ Y
Sbjct: 426 NKNQVDLKYQLYAIVVHNGLSPTSGHYFCFVRSSPSTWHKLDDCRVVKVEEEEVLSQAAY 485
Query: 122 ILFFIR 127
ILF++R
Sbjct: 486 ILFYVR 491
>gi|323447154|gb|EGB03098.1| hypothetical protein AURANDRAFT_2843 [Aureococcus anophagefferens]
Length = 277
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Query: 3 DLCLFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA 62
+ C C + V K++ + +P LV+ L R++G GGKI++ +AFE L L +
Sbjct: 161 EWCCRCCGERVRPTKRLGVAAAPKALVVHLNRYDGR-GGKIEEHVAFEPRLELET----- 214
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 122
+ Y L G +VH G S GHY A+ + G W C +D+ V T EVL ++ Y+
Sbjct: 215 TDGGAASYGLVGVLVHRGQSTRCGHYTAFCRTRSGAWSCFDDAAVRTCTFAEVLRQEAYM 274
Query: 123 LFF 125
LF+
Sbjct: 275 LFY 277
>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
Length = 411
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C V A K +++ +L++ LKRF G K+ K + + E L + ++C+ P
Sbjct: 256 TCLGKVPASKMLTLHTPSKVLILVLKRFSDFTGNKMAKDVHYPEHLDMQPYLCEQRAGPL 315
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G+S SGHY+ ++K G+WY +DS V+ LS+ Y+LF+I+
Sbjct: 316 -VYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDATCALSQHAYVLFYIQ 374
Query: 128 ANQ 130
+
Sbjct: 375 KTE 377
>gi|359324297|ref|XP_003640330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 645
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ SP +L++ L+RF + G K+ K + + E L + ++ + P
Sbjct: 368 CLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPL- 426
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + Y+LF+++
Sbjct: 427 VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 485
>gi|291411127|ref|XP_002721844.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 114/238 (47%), Gaps = 17/238 (7%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C + +A K +++ + +L+ LKRF G K+ + + E L + +M + + P
Sbjct: 258 TCLQKTAASKTLTLQSAGKVLLFVLKRFSEFTGEKLGGQVHYPECLDMRPYMSQQNGRPL 317
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+Y L+ +VH G SGHY+ Y+K G WY +D+ V+ VL++ Y+LF++R
Sbjct: 318 -DYVLYAVLVHVGLRCQSGHYFCYVKAGNGHWYKMDDAKVTACDTTCVLNQSAYVLFYVR 376
Query: 128 ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTV----PLKAVATKPSAEQSSRKTPSTI 183
+ +GT ++ S + G + PL+A ++ EQ+++
Sbjct: 377 KSGV-GGEHGTVSAGRGPSDLEAANTHGHTPGELERPSPLEAGESEEHLEQTTQDLTLDA 435
Query: 184 SKVEKVPSNPRLKFSISGSSGCKGVPPT--SNGKVNVHKSQSVKMNGVVKDSVPKEKS 239
+ + + PR FS+ + V PT SN V +H+++S G+ K +E++
Sbjct: 436 WQALQAQNTPRSAFSL------RTVEPTLPSNAIV-IHQARSAA--GMRKHHPDQERA 484
>gi|345781712|ref|XP_854129.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 7 FSCKKL---VSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS 63
+ C+K V A K +++ SP +L++ L+RF + G K+ K + + E L + ++ +
Sbjct: 253 YHCRKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQR 312
Query: 64 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + Y+L
Sbjct: 313 AGPL-VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVL 371
Query: 124 FFIR 127
F+++
Sbjct: 372 FYMQ 375
>gi|426358879|ref|XP_004046717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 407
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S +L++ LKRF + K+ K + + E L + +M + + P
Sbjct: 134 CLQKAPASKTLTLHTSAKVLILVLKRFSDVTANKLAKNVQYPECLDMQPYMSQQNTGPLV 193
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G+S S HY +Y+K G+WY +D+ V+ S + VLS++ Y LF+I+
Sbjct: 194 -YVLYAVLVHAGWSCHSRHYLSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYDLFYIQ 251
>gi|358333533|dbj|GAA30868.2| ubiquitin carboxyl-terminal hydrolase 36/42 [Clonorchis sinensis]
Length = 835
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C++L +A ++ +I Q IL+IQ RF K+D + F L FM ++ P
Sbjct: 384 NCRQLRAAVRRSTIFQGAPILIIQFNRFSR--NHKLDHRVEFPSSFNLRPFMTD-NKGPP 440
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L+ T+ H G S SGHY A+ + G WY NDS+V+ + + VL + Y+LF+
Sbjct: 441 VLYRLYATVNHEGHSCRSGHYVAFTRRN-GTWYSHNDSFVNSTNPEHVLRQAPYLLFYEA 499
Query: 128 AN----QRPVSANGTFAS 141
N RP A G S
Sbjct: 500 VNPTPAHRPQQAQGEMYS 517
>gi|297742094|emb|CBI33881.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK+ VS KQ+ + Q P + LKRF +G + KIDK + F L L + K +D
Sbjct: 150 NCKEEVSVEKQLLLDQVPLVAAFHLKRFKTDGTYVEKIDKHVEFPLELDLLPYT-KERED 208
Query: 66 PQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
E Y+L+ + H+GFS SGHY++YI+ + W+ +DS V+ VL ++ YIL
Sbjct: 209 DNVELKYELYAIVEHTGFSSTSGHYFSYIRSSPDTWHRLDDSKVTSVPEDYVLHQEAYIL 268
Query: 124 FFIR 127
F+ R
Sbjct: 269 FYAR 272
>gi|359321530|ref|XP_851647.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ SP +L++ L+RF + G K+ K + + E L L ++ + P
Sbjct: 258 CLEKVPASKVLTLHTSPKVLILVLRRFSNLTGNKMTKEVQYPERLDLQHYLSEQRAGPL- 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G S SGHY+ +IK G+WY +D+ VS + L + Y+LF+++
Sbjct: 317 VYVLYAVLVHAGRSCHSGHYFCFIKAGNGQWYKMDDAKVSSCDVICALRQPAYVLFYMQ 375
>gi|195376439|ref|XP_002047004.1| GJ13192 [Drosophila virilis]
gi|251765136|sp|B4LG38.1|UBP36_DROVI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194154162|gb|EDW69346.1| GJ13192 [Drosophila virilis]
Length = 1214
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQ 67
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS F ++ + Q
Sbjct: 382 CKKKVSATKQFSLERAPITLCIQLKRFS-MMGNKLTKQISFKPRIDLSRFAARSPTAAAQ 440
Query: 68 P-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P Y+L + H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 441 PLSYRLVSMVTHLGVSQHCGHYTAIGLTEAGSYYNFDDSYVKPIAMQSVCNTNAYIMFY 499
>gi|194867188|ref|XP_001972018.1| GG15285 [Drosophila erecta]
gi|251765095|sp|B3NC86.1|UBP36_DROER RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190653801|gb|EDV51044.1| GG15285 [Drosophila erecta]
Length = 1085
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK--ASQDP 66
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + + A+Q
Sbjct: 361 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKPRIDLSKYAARSPAAQAQ 419
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 420 PLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRPIAMQSVCNTNAYIMFY 478
>gi|345806604|ref|XP_003435458.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Canis lupus familiaris]
Length = 408
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ SP +L++ L+RF + G K+ K + + E L L ++ + P
Sbjct: 131 CLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDLQHYLSEQRTGPL- 189
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + Y+LF+++
Sbjct: 190 VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSTCDVTCALRQPAYVLFYMQ 248
>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ SP +L++ L+RF + G K+ K + + E L + ++ + P
Sbjct: 258 CLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPL- 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + Y+LF+++
Sbjct: 317 VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|359324293|ref|XP_003640328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ SP +L++ L+RF + G K+ K + + E L + ++ + P
Sbjct: 258 CLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPL- 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + Y+LF+++
Sbjct: 317 VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|222623479|gb|EEE57611.1| hypothetical protein OsJ_08002 [Oryza sativa Japonica Group]
Length = 672
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDP 66
C V KQ+ + +SP+++ I LKRF + KIDK + + L L F C +
Sbjct: 324 CNAKVCKNKQLMLDRSPDVVAIHLKRFTSLDRSVEKIDKHVVYPLELDLKPFHCDPDINK 383
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+ +Y L+G + HSG SP GHY ++ + W+ NDS+V + + L+++ YILF+I
Sbjct: 384 ELKYDLYGVVEHSG-SPSYGHYVCSVRSSPSTWHLMNDSHVDLISEASALNQEGYILFYI 442
Query: 127 R 127
R
Sbjct: 443 R 443
>gi|168037578|ref|XP_001771280.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677369|gb|EDQ63840.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 336
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFG---GKIDKAIAFEEVLVLSSFMCKASQD 65
C V A KQ+++ ++PNILV+ LKRF+ + G GK+ +AF EVL + +M ++
Sbjct: 210 CDAYVDAYKQLTVHEAPNILVVTLKRFKSLQGGRYGKLTNYVAFPEVLDMGPYM-SGNRG 268
Query: 66 PQPEYKLFGTIVHSGFS--PDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L+ +VH+ S +GHY+ +K+ G WY +D+ V+ + V S++ YIL
Sbjct: 269 LTPVYNLYAVVVHASVSNAAHNGHYFCLVKNPNGYWYRADDAKVTEVGVDWVTSQEAYIL 328
Query: 124 FFIR 127
+ R
Sbjct: 329 LYKR 332
>gi|297473553|ref|XP_002707829.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin specific peptidase
17-like 2-like [Bos taurus]
gi|296488783|tpg|DAA30896.1| TPA: ubiquitin specific peptidase 17-like [Bos taurus]
Length = 473
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 209 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 267
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 268 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 326
>gi|358422719|ref|XP_001252302.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 759
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 269 CLRKVPATKRLTLHSTSQVLVLVLKRFTLVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 327
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 328 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|218191394|gb|EEC73821.1| hypothetical protein OsI_08545 [Oryza sativa Indica Group]
Length = 672
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDP 66
C V KQ+ + +SP+++ I LKRF + KIDK + + L L F C +
Sbjct: 324 CNAKVCKNKQLMLDRSPDVVAIHLKRFTSLDRSVEKIDKHVVYPLELDLKPFHCDPDINK 383
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
+ +Y L+G + HSG SP GHY ++ + W+ NDS+V + + L+++ YILF+I
Sbjct: 384 ELKYDLYGVVEHSG-SPSYGHYVCSVRSSPSTWHLMNDSHVDLISEASALNQEGYILFYI 442
Query: 127 R 127
R
Sbjct: 443 R 443
>gi|119929781|ref|XP_874913.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 558
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 294 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 352
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 353 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 411
>gi|397465443|ref|XP_003804505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Pan paniscus]
Length = 403
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + A K +++ S L++ L RF + K+ + + + E + +M + S P
Sbjct: 130 CLQKAPASKTLTLHTSAKFLILVLNRFSNVTCNKLARNVQYRECFYMQPYMSQQSTCPLV 189
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y L+ +VH+G+S +GHY++Y+K G+WY +++ V+ S + VLS++ Y+LF+I+
Sbjct: 190 -YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDEADVTASGITSVLSQQAYVLFYIQK 248
Query: 129 NQ 130
++
Sbjct: 249 SE 250
>gi|50291547|ref|XP_448206.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527517|emb|CAG61157.1| unnamed protein product [Candida glabrata]
Length = 771
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K+ SIL++P L++ LK RF G K+ +A+++ L ++ + C+ S+
Sbjct: 599 CHKTTNALKRNSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDMTEY-CEESKKM 657
Query: 67 QP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK-VYILF 124
P +Y+L +VH G S SGHY A+ K G W +D Y++ T +EVL E+ Y +
Sbjct: 658 LPVKYELLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINKITEREVLKERNAYYVL 717
Query: 125 FIRANQRPVSAN 136
+ R + V N
Sbjct: 718 YTRLTPKSVQLN 729
>gi|413955111|gb|AFW87760.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 813
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 1 MKDLCLFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC 60
+KD CK V+ K I Q+P +LVI LKRF F KI + F L ++SFM
Sbjct: 314 IKDFMCDGCKSRVNLEKHFKIEQAPEVLVIHLKRFTN-FESKIRDKVKFPIELDINSFM- 371
Query: 61 KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 120
+S D +Y L+G + H G + SGHY YI+ + WY ND V ++ L
Sbjct: 372 SSSDDTLQKYDLYGVVEHLG-AYGSGHYVCYIRSSEADWYKFNDDKVCKCSVASALDSAA 430
Query: 121 YILFFIRANQRP 132
Y+LF+++ P
Sbjct: 431 YLLFYVKQGSSP 442
>gi|195127497|ref|XP_002008205.1| GI13361 [Drosophila mojavensis]
gi|251765101|sp|B4KXJ5.1|UBP36_DROMO RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|193919814|gb|EDW18681.1| GI13361 [Drosophila mojavensis]
Length = 1185
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQ 67
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS F ++ + Q
Sbjct: 389 CKKKVSATKQFSLERAPITLCIQLKRFS-MMGNKLTKQISFKPRIDLSRFAARSPAASTQ 447
Query: 68 P-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P Y+L + H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 448 PLSYRLVSMVTHLGVSQHCGHYTAIGLTESGSYYNFDDSYVRPIAMQSVCNTNAYIMFY 506
>gi|119929526|ref|XP_001251337.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 269 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 327
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 328 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|119914980|ref|XP_001256113.1| PREDICTED: ubiquitin specific peptidase 17-like 2-like [Bos taurus]
Length = 533
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 269 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 327
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 328 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|119922836|ref|XP_001254468.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 691
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + L L + + P
Sbjct: 283 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEARYPQCLDLQPYTSERKAGPL- 341
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 342 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 400
>gi|359321516|ref|XP_853986.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 573
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ SP +L++ L+RF + G K+ K + + E L + ++ + P
Sbjct: 258 CLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPL- 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + Y+LF+++
Sbjct: 317 VYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|303288592|ref|XP_003063584.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454652|gb|EEH51957.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 294
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 24/141 (17%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C L A K+++I ++P +LVI LKRF+ +FGGKI + +AF++V+ LS M + + +
Sbjct: 155 ACDALRPATKRLTIHEAPAVLVIHLKRFD-LFGGKISRPVAFDDVVELSGHMSDTAVESR 213
Query: 68 -PEYKLFGTIVHSGFSPDSGHYYAY----------------------IKDAIGRWYCCND 104
P Y+L+ +VH+G S GHYYAY + + WY +D
Sbjct: 214 GPRYRLYAMVVHAGSSVGCGHYYAYARASGGGGGGGGAAAEEDSFYGTRSSGDDWYLFDD 273
Query: 105 SYVSVSTLQEVLSEKVYILFF 125
+ V + +EV ++ Y+LF+
Sbjct: 274 AVVRPVSAREVFDDEAYVLFY 294
>gi|194680854|ref|XP_001255420.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 333
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 62 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 120
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 121 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 179
>gi|198466021|ref|XP_001353862.2| GA18934 [Drosophila pseudoobscura pseudoobscura]
gi|251765181|sp|Q2LZB1.2|UBP36_DROPS RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|198150413|gb|EAL29597.2| GA18934 [Drosophila pseudoobscura pseudoobscura]
Length = 1059
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-Q 67
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS F ++ Q
Sbjct: 359 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKTISFKPRIDLSRFAARSPAAAAQ 417
Query: 68 P-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
P Y+L + H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 418 PLTYRLVSMVTHLGVSQHCGHYTAIGMTESGSYYNFDDSYVRPIAMQSVCNTNAYIMFYE 477
Query: 127 --RANQRPVSANGTFASNG 143
+ P+ +NG +NG
Sbjct: 478 LDLSQTTPLKSNGLRLTNG 496
>gi|440896875|gb|ELR48685.1| Ubiquitin carboxyl-terminal hydrolase 17, partial [Bos grunniens
mutus]
Length = 468
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 204 CLRKVPATKRLALHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 262
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 263 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 321
>gi|444317308|ref|XP_004179311.1| hypothetical protein TBLA_0B09760 [Tetrapisispora blattae CBS 6284]
gi|387512351|emb|CCH59792.1| hypothetical protein TBLA_0B09760 [Tetrapisispora blattae CBS 6284]
Length = 898
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K+ +IL++P L+I LK RF G K+ +A+++ L L+ F C+A +D
Sbjct: 691 CNKTTNATKRSTILRAPETLLIHLKKFRFNGTSSSKMKQAVSYPMFLDLTEF-CEAGKDS 749
Query: 67 --QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYIL 123
+Y+L +VH G S SGHY A+ K G W +D Y++ + +E+L E Y L
Sbjct: 750 ILPVKYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINKISEREMLKEPNAYYL 809
Query: 124 FFIRANQRPVS 134
+ R VS
Sbjct: 810 LYTRLTPHEVS 820
>gi|194680862|ref|XP_001255688.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 575
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 269 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 327
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 328 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|195427887|ref|XP_002062008.1| GK17299 [Drosophila willistoni]
gi|251765137|sp|B4MLR8.1|UBP36_DROWI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194158093|gb|EDW72994.1| GK17299 [Drosophila willistoni]
Length = 1311
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 76/145 (52%), Gaps = 5/145 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA--SQDP 66
CKK VSA KQ S+ ++P L IQLKRF I G K+ K I+F+ + LS F ++ +Q
Sbjct: 412 CKKKVSATKQFSLQRAPITLCIQLKRFSMI-GNKLTKQISFKPRIDLSRFAARSPTAQGQ 470
Query: 67 QP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P Y+L + H G S GHY A G +Y +DSYV +Q V S YI+F+
Sbjct: 471 LPLTYRLVSLVTHLGVSQHCGHYTAIGLTESGSYYNFDDSYVRPIAMQSVCSTNSYIMFY 530
Query: 126 IRANQRPVSANGTFASNGVKSHENG 150
+P+ A NG++ NG
Sbjct: 531 ELDLNQPL-ATPANKLNGLRQLSNG 554
>gi|119922838|ref|XP_001254514.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 480
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 216 CLRKVPATKRLTLHSTSQVLVLVLKRFTLVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 274
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 275 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 333
>gi|134106815|ref|XP_777949.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260649|gb|EAL23302.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 659
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF--------GGKIDKAIAFEEVLVLSSFMC 60
CK+ +A K I Q+P IL + LKRF + K ++ I FE+ L ++ +M
Sbjct: 350 CKRKANATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQTLDIAPYMV 409
Query: 61 KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 120
+ P +Y+LFG H G GHY +Y++ G+W+ +D VS L++VL++K
Sbjct: 410 DPAS-PGTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDEVSPVQLEQVLNDKT 468
Query: 121 -YILFFIRAN 129
Y+L +IR +
Sbjct: 469 AYLLSYIRVD 478
>gi|413938346|gb|AFW72897.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 531
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQD 65
SC V KQ+++ ++P+++ LKRF + KIDK +A+ + L F
Sbjct: 179 SCNARVCKNKQLTLYRAPDVIAFHLKRFTTLDNSVKKIDKYVAYPLEVDLKPFHSNPETV 238
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+ +Y L+G + HSG P+ GHY I+ + WY NDS V T L+++ YILF+
Sbjct: 239 GELKYDLYGVVEHSGL-PNYGHYVCTIRSSPSTWYLMNDSNVDSITDSSALNQEAYILFY 297
Query: 126 IRANQRP 132
+R + P
Sbjct: 298 VRQGKFP 304
>gi|330840214|ref|XP_003292114.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
gi|325077668|gb|EGC31366.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
Length = 413
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C KLV A K + I SP +L +Q+KRF + +GGK +K I F + L LS +M ++
Sbjct: 196 CNKLVKAEKSLQIEISPPVLTVQIKRFSFLNSYGGKDNKHIQFGQTLDLSPYM--TQKND 253
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L +VH G S +SGHYY Y+K + G WY +DS VS + Y +F+
Sbjct: 254 YSIYDLNSVLVHLGDSANSGHYYCYVKGSNGVWYKMDDSMVS----------QAYNVFYT 303
Query: 127 RA-NQRPVSANGTFASN 142
+ +R ++ N N
Sbjct: 304 KGYTERSINTNSVIPKN 320
>gi|357485573|ref|XP_003613074.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514409|gb|AES96032.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1096
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 100/242 (41%), Gaps = 56/242 (23%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A+K++++L++PNIL I LKRF+ K++K++ F EVL ++ +M +D P
Sbjct: 719 CKSYEKAKKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMTPYM-SGRKDKSP 777
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWYCCNDSYVSV----------------- 109
Y L+ +VH + SGHY Y+K+ G W+ +DS V
Sbjct: 778 FYSLYAVVVHLDIMNASFSGHYVCYVKNIQGEWFRTDDSRVRTFKHIFFVSEGLFSLLPP 837
Query: 110 ------------------------STLQEVLSEKVYILFFIRANQRP---VSANGTFASN 142
L VLSE Y+L + R + +P VS+N TF++
Sbjct: 838 KMRLYKLKKLWHYRDALKATCVEPVELSRVLSESAYMLLYARHSPKPLGSVSSNATFSTG 897
Query: 143 GVKSHENGKEAYKGVKGTV--PLKAVATKPSAEQ-----SSRKTPSTISKVEKVPSNPRL 195
K EA V T + A PS +Q S R E VP R
Sbjct: 898 KFK--RRSLEAIPAVSKTRSNSMATNADSPSVQQKQGQHSHRNAVDDSFSNESVPEEWRF 955
Query: 196 KF 197
+
Sbjct: 956 NY 957
>gi|119924425|ref|XP_001250435.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 269 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 327
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 328 GYVLYAVLVHSGWSCERGHYFYYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|255725706|ref|XP_002547782.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135673|gb|EER35227.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 543
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 10/123 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF-EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
C + + K + I P +L + LKRF + KI+ I L LS + + PQ
Sbjct: 425 CSSVKTTTKTLKIQTVPTVLTLHLKRFKHDLNSTKIETKIEIPMFLNLSEY---CVEKPQ 481
Query: 68 PE----YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P+ Y+LFG +VH G S +GHY YIK++ G WY C+DS VS+ EVL+ Y+L
Sbjct: 482 PDVKQIYELFGVVVHEG-SISTGHYTVYIKNS-GHWYKCDDSVVSLVNQDEVLNSNAYLL 539
Query: 124 FFI 126
F+I
Sbjct: 540 FYI 542
>gi|384491601|gb|EIE82797.1| hypothetical protein RO3G_07502 [Rhizopus delemar RA 99-880]
Length = 545
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 25 PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-QPEYKLFGTIVHSGFSP 83
P +L IQLKRF KI K I FE+VL + + ++ + + +Y+L+ IVH+G S
Sbjct: 244 PKVLAIQLKRFNSTDSSKISKYIKFEQVLDIKRTVTESEVNHVKLKYELYAVIVHTGESL 303
Query: 84 DSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI-------RANQRPVSAN 136
+GHY +Y+K + G WYC ++ V ++ +L+EK +LF+ R + PV N
Sbjct: 304 HNGHYVSYVKSSNGIWYCMDNENVQQVSVNRLLAEKASMLFYHIVPDPVKREKKEPVKVN 363
>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 316
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGI-FG-GKIDKAIAFEEVLVLSSFMCKA--SQDPQ 67
L A KQ ++ Q+PN+L +QLKRF + FG GK++ + + L ++ + + +
Sbjct: 196 LTKASKQFTVNQAPNVLALQLKRFAYVPFGRGKLNHFVEYPLELDITPYTSDEGLTSRGK 255
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+G +VH+G S +SGHYY ++K A G W +D ++ + + VL ++ Y+LF+ R
Sbjct: 256 AVYDLYGVLVHAGNSSNSGHYYCFVKVATGTWCLMDDDEITSVSEKVVLKQQAYLLFYAR 315
>gi|380027755|ref|XP_003697584.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 35-like [Apis florea]
Length = 878
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVL--SSFMCKA 62
C KL A++ + IL +P L++ LK F F K+ + + E + L S+ +C
Sbjct: 671 CMKLCDAQRIIKILHAPTYLILILKHFRYDFDTRLRTKLRHKVMYNETIQLPVSTALCTT 730
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--- 119
+++ Y+L+ +VHSG+S D GHY+ Y +D+ WY NDSYVS +T + K
Sbjct: 731 TEN----YQLYAAVVHSGYSMDYGHYFTYARDSKQNWYKFNDSYVSQTTFNDFKDLKPPD 786
Query: 120 -VYILFF 125
YILF+
Sbjct: 787 TPYILFY 793
>gi|426259087|ref|XP_004023133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ovis aries]
Length = 533
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L + + + P
Sbjct: 269 CLRKVPATKRLTLHSTSQVLVLVLKRFTQLSGAKRAQEVRYPQCLDVQPYTSERKAGPL- 327
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ YILF+ R
Sbjct: 328 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYILFYAR 386
>gi|73979654|ref|XP_854031.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 535
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ SP +L++ L+RF + G K+ K + + E L + C + Q P
Sbjct: 258 CLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQH--CLSEQRAGP 315
Query: 69 -EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + Y+LF+++
Sbjct: 316 LVYVLYAVLVHTGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|328788807|ref|XP_395580.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 38-like [Apis
mellifera]
Length = 878
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVL--SSFMCKA 62
C KL A++ + IL +P L++ LK F F K+ + + E + L S+ +C
Sbjct: 671 CMKLCDAQRIIKILHAPTYLILILKHFRYDFDTRLRTKLRHKVMYNETIQLPVSTSLCTT 730
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--- 119
+++ Y+L+ +VHSG+S D GHY+ Y +D+ WY NDSYVS +T + K
Sbjct: 731 TEN----YQLYAAVVHSGYSMDYGHYFTYARDSKQNWYKFNDSYVSQTTFNDFKDLKPPD 786
Query: 120 -VYILFF 125
YILF+
Sbjct: 787 TPYILFY 793
>gi|119929778|ref|XP_001255627.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 533
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + L L + + P
Sbjct: 269 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEARYPQCLDLQPYTSERKAGPL- 327
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 328 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|413938345|gb|AFW72896.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 463
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQD 65
SC V KQ+++ ++P+++ LKRF + KIDK +A+ + L F
Sbjct: 179 SCNARVCKNKQLTLYRAPDVIAFHLKRFTTLDNSVKKIDKYVAYPLEVDLKPFHSNPETV 238
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+ +Y L+G + HSG P+ GHY I+ + WY NDS V T L+++ YILF+
Sbjct: 239 GELKYDLYGVVEHSGL-PNYGHYVCTIRSSPSTWYLMNDSNVDSITDSSALNQEAYILFY 297
Query: 126 IRANQRP 132
+R + P
Sbjct: 298 VRQGKFP 304
>gi|350586616|ref|XP_003128438.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Sus scrofa]
Length = 682
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 527 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 584
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 585 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 644
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N F+ +++ +G T P
Sbjct: 645 ILFY---TQRTVQGNARFSETQLQTQVQSSNNNEGRPRTFP 682
>gi|58258753|ref|XP_566789.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222926|gb|AAW40970.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 576
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF--------GGKIDKAIAFEEVLVLSSFMC 60
CK+ +A K I Q+P IL + LKRF + K ++ I FE+ L ++ +M
Sbjct: 267 CKRKANATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQTLDIAPYMV 326
Query: 61 KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK- 119
+ P +Y+LFG H G GHY +Y++ G+W+ +D VS L++VL++K
Sbjct: 327 DPAS-PGTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDEVSPVQLEQVLNDKT 385
Query: 120 VYILFFIRAN 129
Y+L +IR +
Sbjct: 386 AYLLSYIRVD 395
>gi|365763520|gb|EHN05048.1| Ubp10p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 777
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 609 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 667
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 668 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 726
Query: 126 IRANQRPV 133
R + V
Sbjct: 727 TRLTPKSV 734
>gi|195014496|ref|XP_001984029.1| GH16215 [Drosophila grimshawi]
gi|251765096|sp|B4IXE0.1|UBP36_DROGR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|193897511|gb|EDV96377.1| GH16215 [Drosophila grimshawi]
Length = 1240
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQ 67
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS F ++ + Q
Sbjct: 392 CKKKVSATKQFSLERAPITLCIQLKRFS-MMGNKLTKQISFKPRIDLSRFAARSPTAAAQ 450
Query: 68 P-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
P Y+L + H G S GHY A G +Y +DS V +Q V + YI+F+
Sbjct: 451 PLSYRLVSMVTHLGVSQHCGHYTAIGLTETGSYYNFDDSCVRPIAMQSVCNTNAYIMFY- 509
Query: 127 RANQRPVSANGTFAS---NGVKSHENGKEAY 154
+ V+ NG + NG++ NG + +
Sbjct: 510 ---ELDVNGNGHVVAPKMNGMRLTTNGGQQH 537
>gi|195492054|ref|XP_002093826.1| GE21508 [Drosophila yakuba]
gi|251765138|sp|B4PIW8.1|UBP36_DROYA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194179927|gb|EDW93538.1| GE21508 [Drosophila yakuba]
Length = 1082
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK--ASQDP 66
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+ + + LS + + A+Q
Sbjct: 361 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISLKPRIDLSKYAARSPAAQAQ 419
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 420 PLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRPIAMQSVCNTNAYIMFY 478
>gi|449689020|ref|XP_002163722.2| PREDICTED: uncharacterized protein LOC100214539 [Hydra
magnipapillata]
Length = 703
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 10 KKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDP 66
K A KQ+ I + P IL + LKRFE I GG KI K I F + L ++ F C D
Sbjct: 575 KVFTVATKQLLIQKLPVILTLHLKRFEQIGGGRLRKITKPIKFPKELNMAPF-CSIFSDC 633
Query: 67 QPE---YKLFGTIVHSGFSPDSGHYYAYIK---DAIGRWYCCNDSYVSVSTLQEVLSEKV 120
Q + Y L G I HSG + GHY AY+K D +WYC +DS VS + +VLS++
Sbjct: 634 QKDGVKYFLSGLIEHSG-GLNGGHYVAYVKTKGDQKNQWYCISDSDVSKISEDQVLSKQA 692
Query: 121 YILFFIRA 128
Y+LF+ R
Sbjct: 693 YLLFYERV 700
>gi|349580757|dbj|GAA25916.1| K7_Ubp10p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 784
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 605 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 663
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 664 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 722
Query: 126 IRANQRPV 133
R + V
Sbjct: 723 TRLTPKSV 730
>gi|330443700|ref|NP_014213.2| Ubp10p [Saccharomyces cerevisiae S288c]
gi|347595752|sp|P53874.2|UBP10_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Disrupter
of telomere silencing protein 4; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|329138959|tpg|DAA10367.2| TPA: Ubp10p [Saccharomyces cerevisiae S288c]
gi|392296809|gb|EIW07910.1| Ubp10p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 792
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 613 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 671
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 672 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 730
Query: 126 IRANQRPV 133
R + V
Sbjct: 731 TRLTPKSV 738
>gi|151944355|gb|EDN62633.1| ubiquitin-specific protease [Saccharomyces cerevisiae YJM789]
Length = 788
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 609 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 667
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 668 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 726
Query: 126 IRANQRPV 133
R + V
Sbjct: 727 TRLTPKSV 734
>gi|119929524|ref|XP_001251224.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 490
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + L L + + P
Sbjct: 226 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEARYPQCLDLQPYTSERKAGPL- 284
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 285 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 343
>gi|259149175|emb|CAY82417.1| Ubp10p [Saccharomyces cerevisiae EC1118]
Length = 788
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 609 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 667
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 668 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 726
Query: 126 IRANQRPV 133
R + V
Sbjct: 727 TRLTPKSV 734
>gi|1302173|emb|CAA96080.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 792
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 613 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 671
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 672 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 730
Query: 126 IRANQRPV 133
R + V
Sbjct: 731 TRLTPKSV 738
>gi|256270756|gb|EEU05917.1| Ubp10p [Saccharomyces cerevisiae JAY291]
Length = 792
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 613 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 671
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 672 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 730
Query: 126 IRANQRPV 133
R + V
Sbjct: 731 TRLTPKSV 738
>gi|323346839|gb|EGA81118.1| Ubp10p [Saccharomyces cerevisiae Lalvin QA23]
Length = 789
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 609 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 667
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 668 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 726
Query: 126 IRANQRPV 133
R + V
Sbjct: 727 TRLTPKSV 734
>gi|359324338|ref|XP_540055.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 524
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ SP +L++ L+RF + G K+ K + + E L + ++ + P
Sbjct: 247 CLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPL- 305
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +V++G S SGHY+ ++K G+WY +D+ VS + L + Y+LF+++
Sbjct: 306 VYVLYAVLVYAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 364
>gi|326429193|gb|EGD74763.1| hypothetical protein PTSG_07000 [Salpingoeca sp. ATCC 50818]
Length = 614
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
SC V A KQ+S+ ++PNIL IQLKRF G+F GK++K IAF L L +FM ++D
Sbjct: 273 SCNSHVRALKQLSVYKAPNILCIQLKRFRLGVF-GKVNKHIAFPHQLNLKNFMTPGTRDT 331
Query: 67 QP-EYKLFGTIVHSGFS--PDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
EY L+ ++H GHY A IK + G W +DS V + + Y+L
Sbjct: 332 DGLEYDLYAILIHLDMYNLTSFGHYVALIKGSDGVWRLYDDSKVQEVERNVIPNVNPYML 391
Query: 124 FFIR 127
F+ R
Sbjct: 392 FYKR 395
>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 591
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQD 65
SC VS KQ+++ ++P+++ LKRF + KIDK + + + L F
Sbjct: 230 SCNAQVSKNKQLTLHRAPDVIAFHLKRFTTLDNSVEKIDKHVVYPLEVDLKPFHSNPDTV 289
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+Y L+G + HSG P+ GHY I+ + WY NDS V T L+++ YILF+
Sbjct: 290 GGLKYDLYGVVEHSGL-PNYGHYTCTIRSSPSTWYFMNDSKVDSCTDSSALNQEAYILFY 348
Query: 126 IRANQRP 132
+R + P
Sbjct: 349 VRQGKFP 355
>gi|400261275|pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261279|pdb|4FIP|E Chain E, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261291|pdb|4FK5|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11SUS1SGF73 DUB MODULE
Length = 476
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D
Sbjct: 344 CNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKD 403
Query: 66 PQPE--------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
E Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL
Sbjct: 404 KHSENGKVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLK 462
Query: 118 EKVYILFF 125
E+ Y+LF+
Sbjct: 463 EQAYLLFY 470
>gi|397568230|gb|EJK46029.1| hypothetical protein THAOC_35324 [Thalassiosira oceanica]
Length = 753
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 17 KQMSILQSPNILVIQLKRFE-GIFG--GKIDKAIAFEEVLVLSSFMCKASQ-DPQPEYKL 72
K + + +P +LVI KRF ++G ++ K + F L + +M +A++ PQP Y L
Sbjct: 428 KGLRLATAPTMLVINYKRFAYDMYGRMSRLSKPVHFPLRLEIGEYMSRANRGKPQP-YTL 486
Query: 73 FGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+VH G S D GHY+AY++ WY CNDS V+ + EVL + Y+L +
Sbjct: 487 VAVLVHRGRSCDRGHYFAYVRKGKD-WYLCNDSVVTKVDVSEVLKSQAYVLVY 538
>gi|323352898|gb|EGA85200.1| Ubp10p [Saccharomyces cerevisiae VL3]
Length = 801
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 609 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 667
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 668 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 726
Query: 126 IRANQRPV 133
R + V
Sbjct: 727 TRLTPKSV 734
>gi|294979873|pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE
gi|294979877|pdb|3MHS|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE BOUND
Ubiquitin Aldehyde
gi|400261283|pdb|4FJC|A Chain A, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
gi|400261287|pdb|4FJC|E Chain E, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
Length = 476
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D
Sbjct: 344 CNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKD 403
Query: 66 PQPE--------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
E Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL
Sbjct: 404 KHSENGKVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLK 462
Query: 118 EKVYILFF 125
E+ Y+LF+
Sbjct: 463 EQAYLLFY 470
>gi|195174068|ref|XP_002027804.1| GL16307 [Drosophila persimilis]
gi|194115480|gb|EDW37523.1| GL16307 [Drosophila persimilis]
Length = 530
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-Q 67
CKK VSA KQ S+ ++P L IQLKRF I G K+ K I+F+ + LS F ++ Q
Sbjct: 360 CKKKVSATKQFSLERAPITLCIQLKRFSMI-GNKLTKTISFKPRIDLSRFAARSPAAAAQ 418
Query: 68 P-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
P Y+L + H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 419 PLTYRLVSMVTHLGVSQHCGHYTAIGMTESGSYYNFDDSYVRPIAMQSVCNTNAYIMFYE 478
Query: 127 --RANQRPVSANGTFASNG 143
+ P+ +NG +NG
Sbjct: 479 LDLSQTTPLKSNGLRLTNG 497
>gi|307180575|gb|EFN68531.1| Ubiquitin carboxyl-terminal hydrolase 38 [Camponotus floridanus]
Length = 883
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 14/127 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVL--SSFMCKA 62
C KL A++ ++ILQ+P LV+ LK F F K+ + + + + L S+ C A
Sbjct: 676 CTKLCDAQRIITILQAPAHLVLTLKHFRYDFDTRLRTKLRHKVTYNDTIRLPVSAIPCTA 735
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--- 119
++ Y L+ +VHSG+S D GHY+ Y D+ WY NDS+VS +T ++ S K
Sbjct: 736 AE----TYHLYAAVVHSGYSMDYGHYFTYACDSKQNWYKFNDSFVSQTTFEDFKSLKPPD 791
Query: 120 -VYILFF 125
YILF+
Sbjct: 792 TPYILFY 798
>gi|307107733|gb|EFN55975.1| hypothetical protein CHLNCDRAFT_145319 [Chlorella variabilis]
Length = 928
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ- 67
CK V+A K ++ +P++L I LKRF GKI ++F E L + +M + D
Sbjct: 292 CKAYVAADKSTALEVAPHMLQICLKRFAPGRFGKITSRLSFPEQLDMGPYMAASCLDGDL 351
Query: 68 PEYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+Y+L+ +VH G S D GHY AY++ W+ C+DS V+ + +VL+ Y+LF+
Sbjct: 352 VQYRLYAVVVHIDWGRSTDYGHYIAYVRCG-SSWFQCDDSSVTAVSAAKVLASSAYLLFY 410
Query: 126 IRANQRPVSANG 137
R R + A G
Sbjct: 411 ERQVPRRIVAVG 422
>gi|6323879|ref|NP_013950.1| Ubp8p [Saccharomyces cerevisiae S288c]
gi|1717872|sp|P50102.1|UBP8_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|295789530|pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module
gi|887604|emb|CAA90194.1| unknown [Saccharomyces cerevisiae]
gi|151945927|gb|EDN64159.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae
YJM789]
gi|285814227|tpg|DAA10122.1| TPA: Ubp8p [Saccharomyces cerevisiae S288c]
gi|392297392|gb|EIW08492.1| Ubp8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 471
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D
Sbjct: 339 CNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKD 398
Query: 66 PQPE--------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
E Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL
Sbjct: 399 KHSENGKVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLK 457
Query: 118 EKVYILFF 125
E+ Y+LF+
Sbjct: 458 EQAYLLFY 465
>gi|349580513|dbj|GAA25673.1| K7_Ubp8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 471
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D
Sbjct: 339 CNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKD 398
Query: 66 PQPE--------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
E Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EVL
Sbjct: 399 KHSENGKVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSIVSSISQEEVLK 457
Query: 118 EKVYILFF 125
E+ Y+LF+
Sbjct: 458 EQAYLLFY 465
>gi|194750190|ref|XP_001957513.1| GF23992 [Drosophila ananassae]
gi|251765094|sp|B3M3M6.1|UBP36_DROAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190624795|gb|EDV40319.1| GF23992 [Drosophila ananassae]
Length = 1091
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA-SQDPQ 67
CKK VSA KQ + ++P L IQLKRF + G K+ K I F+ + LS F ++ + Q
Sbjct: 364 CKKKVSATKQFRLERAPITLCIQLKRFS-MMGNKLTKQITFKPRIDLSKFAARSPAASVQ 422
Query: 68 PE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P Y+L + H G S GHY A G +Y +DSYV +Q V + YI+F+
Sbjct: 423 PLIYRLVSMVTHLGVSQHCGHYTAIGSTEAGSYYNFDDSYVRPIAIQSVCNTNAYIMFY 481
>gi|91089399|ref|XP_974056.1| PREDICTED: similar to non-stop CG4166-PA [Tribolium castaneum]
gi|270012546|gb|EFA08994.1| hypothetical protein TcasGA2_TC006701 [Tribolium castaneum]
Length = 482
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQD 65
+C+ + KQ+++ P ++ LKRF+ + KI I+F E+L ++ FM ++ D
Sbjct: 351 NCQSKQESTKQLTMNTLPIVISFHLKRFQHMNEMEKKISTTISFPEMLDMTPFMSRSKTD 410
Query: 66 -PQP---EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
P P Y LF I H G S + GHY AY++ WY C+D ++ +TL+EVL + Y
Sbjct: 411 SPFPSDNRYSLFAVINHIGNSINVGHYTAYVRQLQDYWYKCDDHVITRATLKEVLDSEGY 470
Query: 122 ILFF 125
+LF+
Sbjct: 471 LLFY 474
>gi|168044470|ref|XP_001774704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674004|gb|EDQ60519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V ARKQ+++ ++PN+L I LKRF+ GK++K + F EVL +S +M A+ P
Sbjct: 303 CNAYVRARKQLTVYEAPNVLTIALKRFQSGKFGKLNKRVTFPEVLDMSPYMSGANDHPLL 362
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEV 115
Y+L+ +VH S GHY ++KD+ G WY +D V L+ V
Sbjct: 363 -YRLYAVVVHVDMLNASFFGHYICFVKDSNGVWYKIDDRKVQRHYLRAV 410
>gi|440897206|gb|ELR48950.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 6, partial
[Bos grunniens mutus]
Length = 334
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K++++ + +LV+ LKRF + G K + + + + L L + + P
Sbjct: 173 CLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPL- 231
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VHSG+S + GHY+ Y++ G+WY +D+ V+ LS+ Y+LF+ R
Sbjct: 232 GYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 290
>gi|403280795|ref|XP_003931895.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Saimiri
boliviensis boliviensis]
Length = 1119
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 47 IAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSY 106
+ + E L + +M + + DP Y L+ +VHSG+S +GHYY Y+K + G+WY NDS
Sbjct: 336 VGYPEFLNIRPYMSQNNGDPV-MYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSL 394
Query: 107 VSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKS 146
V S ++ VL+++ Y+LF++R S G + G S
Sbjct: 395 VHSSNVKVVLNQQAYVLFYLRIPGSKKSPEGPISKTGSSS 434
>gi|401841065|gb|EJT43615.1| UBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 473
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 14/130 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C A KQ+ I + P++LV+QLKRFE + G K+D I F L + S+ A +
Sbjct: 339 CNSTQDAIKQLGIHRLPSVLVLQLKRFEHLLNGTNRKLDDFIEFPTYLNMKSYCSTAESE 398
Query: 66 ----------PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV 115
P Y+L G + H G + + GHY A+ K + G+W+ NDS VS + +EV
Sbjct: 399 SENHIGNGKVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEEV 457
Query: 116 LSEKVYILFF 125
L E+ Y+LF+
Sbjct: 458 LKEQAYLLFY 467
>gi|50294832|ref|XP_449827.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529141|emb|CAG62807.1| unnamed protein product [Candida glabrata]
Length = 461
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Query: 7 FSCKKLVSAR---KQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMC 60
F CKK + + KQ +I + P +LV+QLKRFE + G K++ I F ++L + ++
Sbjct: 329 FFCKKCQAQQNPIKQFTINKLPPVLVLQLKRFEHLMSGVNQKLNDYIEFPKILDMKPYL- 387
Query: 61 KASQDPQPE----YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 116
K +Q+P + Y+L G I H+G S + GHY A+ K G W+ NDS V+ ++VL
Sbjct: 388 KDNQNPDEDPSILYELIGIISHTG-SVNEGHYVAFCKIENGEWFKFNDSMVTKILEKDVL 446
Query: 117 SEKVYILFFI 126
E+ Y+LF+I
Sbjct: 447 KEQAYLLFYI 456
>gi|47219848|emb|CAF97118.1| unnamed protein product [Tetraodon nigroviridis]
Length = 977
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L + F+ K S
Sbjct: 571 CKKLRNGVKYCKVLKLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLNMQPFLAKDSPS 630
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 631 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 689
Query: 125 FIRANQRPVSAN 136
+ A +RP+ N
Sbjct: 690 YRLALERPIELN 701
>gi|410965266|ref|XP_003989171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Felis catus]
Length = 711
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L ARKQ+ + P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 553 LTEARKQLMVCHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRESLKS 610
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 611 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 670
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 671 ILFY---TQR-VTENG 682
>gi|350404556|ref|XP_003487143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 35-like [Bombus
impatiens]
Length = 879
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVL--SSFMCKA 62
C KL A++ + IL +P L++ LK F F K+ + + E + + S+ +C +
Sbjct: 672 CMKLCDAQRIIKILHAPTYLILILKHFRYDFDTRLRTKLRHKVMYNETIQMPVSTPLCTS 731
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--- 119
++ Y+L+ +VHSG+S D GHY+ Y +D+ WY NDSYVS +T + K
Sbjct: 732 TES----YQLYAAVVHSGYSMDYGHYFTYARDSKQNWYKFNDSYVSQTTFNDFKDLKPPD 787
Query: 120 -VYILFF 125
YILF+
Sbjct: 788 TPYILFY 794
>gi|255086105|ref|XP_002509019.1| predicted protein [Micromonas sp. RCC299]
gi|226524297|gb|ACO70277.1| predicted protein [Micromonas sp. RCC299]
Length = 374
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS----Q 64
C+ V A K I SPN+LV+ LKR+ KI K + F L L+ +M + + +
Sbjct: 251 CRAYVRAEKGGKIHVSPNVLVVPLKRYTMGRFSKITKFVEFPATLDLTPYMSRDAPYEGK 310
Query: 65 DPQPEYKLFGTIVH--SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 122
P P Y L+G +VH G S SGHY +Y++ GRW C+D + + VL +K Y+
Sbjct: 311 SP-PTYTLYGVVVHLDWGGSAHSGHYVSYVRLLDGRWCKCDDGRIEETDEATVLKQKAYL 369
Query: 123 LFFIR 127
LF+ R
Sbjct: 370 LFYER 374
>gi|403216293|emb|CCK70790.1| hypothetical protein KNAG_0F01220 [Kazachstania naganishii CBS
8797]
Length = 784
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKAS--- 63
C K +A K+ SIL++P L++ LK RF G K+ +A+++ L L+ + K +
Sbjct: 577 CHKTTNAAKRNSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTKYCDKEATPK 636
Query: 64 -QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KV 120
QD P +Y+L +VH G S SGHY A+ K G W +D Y++ T ++VL E
Sbjct: 637 GQDVLPVKYQLISVVVHEGRSLSSGHYIAHCKQPDGSWSTYDDEYINKITERDVLRESNA 696
Query: 121 YILFFIRANQRPVSANGTFASNGVKSHE 148
Y L + R + + +S VKS E
Sbjct: 697 YYLVYTRLTSKAIKLRDDLSS--VKSME 722
>gi|190409165|gb|EDV12430.1| ubiquitin carboxyl-terminal hydrolase 10 [Saccharomyces cerevisiae
RM11-1a]
Length = 554
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C++ + P
Sbjct: 375 CHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CESKELP 433
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y+++ + ++VL E Y L +
Sbjct: 434 V-KYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLY 492
Query: 126 IRANQRPVS---ANGTFASNGVKSHENGKEA 153
R + V A A+ V S ++A
Sbjct: 493 TRLTPKSVPLPLAKSAMATGNVTSKSKQEQA 523
>gi|168036283|ref|XP_001770637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678158|gb|EDQ64620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 271
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE-GIFG-GKIDKAIAFEEVLVLSSFMCKASQDP 66
++VSA K + I P++L++ L RF G G GK++KAI + L + + S
Sbjct: 145 ASEVVSASKAIKIQSLPSVLIVHLMRFSYGASGSGKLNKAIKYSNSLTIGRELLATSTGS 204
Query: 67 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
E Y+L T+ H G +P +GHY A + GRW +D+ VSV + +VL E Y+L
Sbjct: 205 ATEGRKYELVATVTHHGNNPSTGHYTADCRQPDGRWLRFDDAVVSVVPINQVLQEHTYVL 264
Query: 124 FFIRANQ 130
F+ R +
Sbjct: 265 FYKRVSH 271
>gi|224126461|ref|XP_002329560.1| predicted protein [Populus trichocarpa]
gi|222870269|gb|EEF07400.1| predicted protein [Populus trichocarpa]
Length = 809
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMC-KASQ 64
+CK+ VS KQ+ + ++P+I + LKRF +G KI K + F L L ++ S
Sbjct: 447 NCKEEVSREKQLMLDKAPSIAALHLKRFKIDGTSVEKIGKHVEFPLELDLKPYINDNDSN 506
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
D +Y+L+ +VH G+S SGHY YI+ + W+ +D VS + VLS+ YILF
Sbjct: 507 DVGFKYQLYAVVVHKGYSLTSGHYVCYIRSSPDTWHKLDDPEVSKEREEFVLSQAAYILF 566
Query: 125 FIR 127
+ R
Sbjct: 567 YAR 569
>gi|284004932|ref|NP_001164812.1| ubiquitin carboxyl-terminal hydrolase 49 [Oryctolagus cuniculus]
gi|217038348|gb|ACJ76640.1| ubiquitin specific protease 49 homolog (predicted) [Oryctolagus
cuniculus]
Length = 685
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 530 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 587
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 588 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 647
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ + +G T P
Sbjct: 648 ILFY---TQRTVQGNARISETQLQAQVQSRNNGEGRPQTFP 685
>gi|190408449|gb|EDV11714.1| ubiquitin carboxyl-terminal hydrolase 8 [Saccharomyces cerevisiae
RM11-1a]
gi|256271624|gb|EEU06666.1| Ubp8p [Saccharomyces cerevisiae JAY291]
gi|259148808|emb|CAY82053.1| Ubp8p [Saccharomyces cerevisiae EC1118]
gi|323303444|gb|EGA57239.1| Ubp8p [Saccharomyces cerevisiae FostersB]
gi|323332143|gb|EGA73554.1| Ubp8p [Saccharomyces cerevisiae AWRI796]
gi|323336055|gb|EGA77329.1| Ubp8p [Saccharomyces cerevisiae Vin13]
gi|323347039|gb|EGA81315.1| Ubp8p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353165|gb|EGA85465.1| Ubp8p [Saccharomyces cerevisiae VL3]
Length = 471
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D
Sbjct: 339 CNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKD 398
Query: 66 PQPE--------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
E Y+L G + H G + + GHY A+ K + G+W+ NDS VS + EVL
Sbjct: 399 KHSENGKVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQAEVLK 457
Query: 118 EKVYILFF 125
E+ Y+LF+
Sbjct: 458 EQAYLLFY 465
>gi|395832341|ref|XP_003789230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Otolemur
garnettii]
gi|201066432|gb|ACH92565.1| ubiquitin specific protease 49 homolog (predicted) [Otolemur
garnettii]
Length = 688
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LTEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ +G T P
Sbjct: 651 ILFY---TQRTVQGNARISETQLQAQVQSSNNDEGRPQTFP 688
>gi|357143206|ref|XP_003572840.1| PREDICTED: uncharacterized protein LOC100831961 [Brachypodium
distachyon]
Length = 712
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQD 65
SC V K++ + ++P+++ QLKRF + KIDK +A+ L L F +
Sbjct: 355 SCNVQVCKGKRLLLDKTPDVIAFQLKRFTTLDHSIEKIDKHVAYPSELDLKPFHSNPVSE 414
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+ +Y L+G + HSG P+ GHY I+ + W+ NDS V T L ++ YILF+
Sbjct: 415 EELKYDLYGVVEHSGL-PNYGHYVCAIRSSPSTWHLMNDSQVDSITETSALHQEAYILFY 473
Query: 126 IR 127
+R
Sbjct: 474 VR 475
>gi|323307659|gb|EGA60924.1| Ubp8p [Saccharomyces cerevisiae FostersO]
Length = 471
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C A KQ+ I + P++LV+QLKRFE + G K+D I F L + ++ +D
Sbjct: 339 CNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKD 398
Query: 66 PQPE--------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
E Y+L G + H G + + GHY A+ K + G+W+ NDS VS + EVL
Sbjct: 399 KHSENGKVPDIIYELIGIVSHKG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQAEVLK 457
Query: 118 EKVYILFF 125
E+ Y+LF+
Sbjct: 458 EQAYLLFY 465
>gi|321479440|gb|EFX90396.1| hypothetical protein DAPPUDRAFT_39928 [Daphnia pulex]
Length = 447
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 2/125 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC-KASQDPQ 67
CK V A K+ SI ++PN+L IQLKRF G+ GGK+ K I F L L+ F+ ++S P
Sbjct: 321 CKSKVPATKKFSIERAPNVLCIQLKRF-GLMGGKMSKHIQFSRNLNLNRFLFHQSSGGPC 379
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
YK I H G S GHY A + + G+ Y +D V + +L +S Y+L + +
Sbjct: 380 VTYKFVSLINHMGPSQHCGHYTAIAEASNGQLYLFDDCSVRLISLNVAMSTGAYVLIYEK 439
Query: 128 ANQRP 132
P
Sbjct: 440 VQSSP 444
>gi|351707914|gb|EHB10833.1| Ubiquitin carboxyl-terminal hydrolase 49 [Heterocephalus glaber]
Length = 525
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I P +L + LKRF + G KI +AFE+VL + + C+ +S
Sbjct: 370 LSEARKQLMIYTLPQVLRLHLKRFR--WSGRNHREKIGVHVAFEQVLTMEPYCCRDMLSS 427
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 428 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 487
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ +G ++P
Sbjct: 488 ILFY---TQRTVQGNARISETQLRAQVQSSNKDEGRPQSLP 525
>gi|219113607|ref|XP_002186387.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583237|gb|ACI65857.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 347
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 11/130 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--------GIFGGKIDKAIAFE-EVLVLSSFM 59
C++ V A K +++ P+IL+I LKRF + K+D + F E L L+ ++
Sbjct: 218 CRQHVCALKMIALWTIPDILIIHLKRFTFDTCMASGHMLRSKVDDKVEFPIEGLDLTKYI 277
Query: 60 C-KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLS 117
D P Y+LFG H+G + +SGHY A ++++I G+WY CNDS+V ++ + ++
Sbjct: 278 LGPVDPDAPPVYRLFGVSEHTGPTANSGHYTATVRNSIDGQWYRCNDSHVGRTSGEASIT 337
Query: 118 EKVYILFFIR 127
Y+LF+ R
Sbjct: 338 GGAYVLFYQR 347
>gi|168011115|ref|XP_001758249.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690705|gb|EDQ77071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 430
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A K++++ ++PN+LV+ LKRF+G K+ K + F E+L L+ +M + P P
Sbjct: 283 CDAYVDAYKRIAVHEAPNVLVVTLKRFKGGRYEKLTKEVVFPEILDLTPYMSENGDRP-P 341
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y L+ +VH S S GHY+ + + WY +D V+ ++ V S++ YIL +
Sbjct: 342 HYNLYAVVVHVNESNASHYGHYFCLVMNPSSHWYRVDDMKVTEVSVNWVTSQEAYILLYK 401
Query: 127 RA 128
R+
Sbjct: 402 RS 403
>gi|426251093|ref|XP_004019266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 49 [Ovis aries]
Length = 631
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 476 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 533
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 534 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 593
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N ++ +++ + +G T P
Sbjct: 594 ILFY---TQRTVQGNARISATQLQTQVHSSNNDEGRPRTFP 631
>gi|429327458|gb|AFZ79218.1| Ubiquitin carboxyl-terminal hydrolase family member protein
[Babesia equi]
Length = 668
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDP 66
CK +A K +SI +SP IL I LKRF G K KAI F + L LS + ++
Sbjct: 294 CKSHQNADKSLSIYKSPRILNINLKRFNVSSHGLEKSTKAIEFPQSLSLS-LKHEVDREI 352
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--VYILF 124
+ +Y+L+ + H G S GHY YIK G WYC +DS V + +V S+K VY+LF
Sbjct: 353 RLKYQLYAIVCHIGKSLRMGHYITYIKGHHGFWYCFDDSNVRCVSESKVFSQKNDVYLLF 412
Query: 125 FIRANQ 130
+ N+
Sbjct: 413 YSIVNE 418
>gi|348576282|ref|XP_003473916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49-like [Cavia
porcellus]
Length = 670
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I P +L + LKRF + G KI +AFE+VL + + C+ +S
Sbjct: 515 LSEARKQLMIYTLPQVLRLHLKRFR--WSGRNHREKIGVHVAFEQVLTMEPYCCRDMLSS 572
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 573 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 632
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 633 ILFY---TQRTVQGNSRISETQLQA 654
>gi|357619275|gb|EHJ71919.1| hypothetical protein KGM_06054 [Danaus plexippus]
Length = 880
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C K VSA KQ I ++P +L I LKRF + GGK+ K + F + + L+ ++ + Q
Sbjct: 309 ACNKKVSATKQFFIERAPMVLCIALKRF-SLAGGKLSKHVQFRKKINLNKYIYNKNNPHQ 367
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
YKL + H G S +SGHY A + +Y +DS V L VL YI+FF +
Sbjct: 368 LSYKLVSLVTHLGPSQNSGHYTAIGQAPNSNYYQFDDSCVRPIPLSAVLGTNAYIMFFEK 427
Query: 128 AN 129
N
Sbjct: 428 DN 429
>gi|145491367|ref|XP_001431683.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398788|emb|CAK64285.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAF-EEVLVLSSFMCKASQ 64
+C KLV A K++ + + P IL+I LKRF+ I G KI++AI F E L LS + K Q
Sbjct: 308 NCHKLVDAIKKIDLWKLPTILIIHLKRFKFIENGIKKIEQAINFPMESLNLSQCLPKL-Q 366
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYIL 123
+P Y+L G I H+G S D GHYY Y + WY ND V E+ E Y+L
Sbjct: 367 KEKPIYELLGVICHTGTS-DRGHYYTYARSKENFNWYLFNDRQVKQVNFTEIPQEDAYLL 425
Query: 124 FF 125
+
Sbjct: 426 MY 427
>gi|340716533|ref|XP_003396752.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 35-like [Bombus terrestris]
Length = 878
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVL--SSFMCKA 62
C KL A++ + IL +P L++ LK F F K+ + + E + + S+ +C +
Sbjct: 671 CVKLCDAQRIIKILHAPTYLILILKHFRYDFDTRLRTKLRHKVRYNETIQMPVSTPLCTS 730
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--- 119
++ Y+L+ +VHSG+S D GHY+ Y +D+ WY NDSYVS +T + K
Sbjct: 731 TES----YQLYAAVVHSGYSMDYGHYFTYARDSKQNWYKFNDSYVSQTTFNDFKDLKPPD 786
Query: 120 -VYILFF 125
YILF+
Sbjct: 787 TPYILFY 793
>gi|297459183|ref|XP_595518.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 isoform 1 [Bos
taurus]
gi|297488983|ref|XP_002697284.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Bos taurus]
gi|296474468|tpg|DAA16583.1| TPA: ubiquitin carboxyl-terminal hydrolase 49 (predicted)-like [Bos
taurus]
Length = 683
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 528 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 585
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 586 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 645
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ + +G T P
Sbjct: 646 ILFY---TQRTVQGNARISETQLQTQVHSSNNDEGRPRTFP 683
>gi|367007671|ref|XP_003688565.1| hypothetical protein TPHA_0O01640 [Tetrapisispora phaffii CBS 4417]
gi|357526874|emb|CCE66131.1| hypothetical protein TPHA_0O01640 [Tetrapisispora phaffii CBS 4417]
Length = 746
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKK +A K+ +IL++P L++ LK RF G K+ +A+++ L L+S+ K
Sbjct: 553 CKKTTNAVKRNTILRAPETLLVHLKKFRFNGQSSSKMKQAVSYPMFLDLTSYCDKTKSKL 612
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
Y+L +VH G S SGHY A+ K G W +D Y ++ + + VL E Y L +
Sbjct: 613 LVMYQLISVVVHEGRSLSSGHYIAHCKQPDGTWATYDDEYTNIISERNVLKEPNAYYLVY 672
Query: 126 IRANQRPV 133
R R +
Sbjct: 673 TRLTPREI 680
>gi|340368234|ref|XP_003382657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Amphimedon
queenslandica]
Length = 884
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CK+ V A K+ + + P ILVI LKRF F KI+ + F E L LS ++ ++
Sbjct: 701 CKEHVQASKKFDLWKMPEILVIHLKRFSYNRYFRNKIESKVEFPLENLDLSDYVVN-QEE 759
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
PQP Y LF H G GHY AY K+ G+WY +DS+VS ++ + + S Y+LF
Sbjct: 760 PQPLYDLFAVSNHFG-GLGGGHYTAYAKNKDNGKWYSFDDSHVSEASPESICSSASYLLF 818
Query: 125 FIRANQ 130
+ R +
Sbjct: 819 YQRKTE 824
>gi|229368738|gb|ACQ63020.1| ubiquitin specific protease 49 homolog (predicted) [Dasypus
novemcinctus]
Length = 688
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ +G T P
Sbjct: 651 ILFY---TQRTVQGNARLSETQLQAQVQSSNIDEGRPRTFP 688
>gi|301767740|ref|XP_002919284.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like
[Ailuropoda melanoleuca]
gi|300681208|sp|D2HBJ8.1|UBP44_AILME RecName: Full=Ubiquitin carboxyl-terminal hydrolase 44; AltName:
Full=Deubiquitinating enzyme 44; AltName: Full=Ubiquitin
thioesterase 44; AltName:
Full=Ubiquitin-specific-processing protease 44
gi|281340396|gb|EFB15980.1| hypothetical protein PANDA_007904 [Ailuropoda melanoleuca]
Length = 711
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 553 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRESLKS 610
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 611 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 670
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 671 ILFY---TQR-VTENG 682
>gi|170041357|ref|XP_001848432.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864941|gb|EDS28324.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1034
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CKK V+A KQ S+ ++P L IQLKRF + GGKI+K + L LS + CK +
Sbjct: 322 ACKKRVAATKQFSLERAPFALCIQLKRFS-MMGGKINKHVELRNRLDLSPY-CKTGK--- 376
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G + GHY A G +Y +DS V ++Q V S YI+F+
Sbjct: 377 LTYRLVSMVTHLGNTQHCGHYTAIGGTESGSYYVFDDSSVRPISMQNVTSTNAYIIFY 434
>gi|329663404|ref|NP_001192766.1| ubiquitin carboxyl-terminal hydrolase 44 [Bos taurus]
gi|296487959|tpg|DAA30072.1| TPA: ubiquitin specific peptidase 49 [Bos taurus]
Length = 709
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 551 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRESLKS 608
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 609 LRPECFLYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 668
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 669 ILFY---TQR-VTENG 680
>gi|157131284|ref|XP_001662174.1| hypothetical protein AaeL_AAEL002698 [Aedes aegypti]
gi|108881830|gb|EAT46055.1| AAEL002698-PA [Aedes aegypti]
Length = 1100
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCK-ASQDP 66
+CKK V+A KQ S+ ++P L IQLKRF + G KI+K + + L L+ F K A +
Sbjct: 385 ACKKKVAATKQFSLERAPFALCIQLKRFS-MMGNKINKHVELKTRLDLTPFSSKSAVSNC 443
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+ YKL + H G + GHY A G +Y +DS V +LQ V S YI+F+
Sbjct: 444 RLTYKLVSMVTHLGSTQHCGHYTAIGGTESGTYYVFDDSLVRPISLQNVTSTNAYIIFY 502
>gi|440900696|gb|ELR51774.1| Ubiquitin carboxyl-terminal hydrolase 44 [Bos grunniens mutus]
Length = 709
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 551 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRESLKS 608
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 609 LRPECFLYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 668
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 669 ILFY---TQR-VTENG 680
>gi|426224312|ref|XP_004006316.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Ovis aries]
Length = 709
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 551 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRESLKS 608
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 609 LRPECFLYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 668
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 669 ILFY---TQR-VTENG 680
>gi|57096777|ref|XP_532654.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 1
[Canis lupus familiaris]
Length = 711
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 553 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRESLKS 610
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 611 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 670
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 671 ILFY---TQR-VTENG 682
>gi|335288866|ref|XP_003126758.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like [Sus
scrofa]
Length = 709
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 551 LTEAQKQLMICHLPQVLRLHLKRFR--WSGHNNREKIGVHVGFEEILNMEPYCCRESLKS 608
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 609 LRPECFIYDLAAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 668
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 669 ILFY---TQR-VAENG 680
>gi|126309997|ref|XP_001379917.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Monodelphis
domestica]
Length = 697
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 542 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDTLSS 599
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 600 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 659
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ + + + + T P
Sbjct: 660 ILFY---TQRTVQGNAGISETQLQAQVRSRNSDEDRRLTFP 697
>gi|156063478|ref|XP_001597661.1| hypothetical protein SS1G_01857 [Sclerotinia sclerotiorum 1980]
gi|154697191|gb|EDN96929.1| hypothetical protein SS1G_01857 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 643
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK+ + SI +P+IL +QLKRF G G K + + L LS + +
Sbjct: 525 CKKVGDVHRVQSISHAPDILFVQLKRF-GYDGRKDKLTLPIDHTLDLSPYRDPSGSKDSM 583
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL-SEKVYILFFIR 127
EY+L ++ HSG S D GHY + GRW C ND+Y +TL + L S + Y+LF+ R
Sbjct: 584 EYELVASVSHSG-SLDYGHYICDARGPDGRWNCFNDAYYDPTTLAKALGSNQPYLLFYQR 642
>gi|296198141|ref|XP_002746578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Callithrix
jacchus]
gi|167206805|gb|ABZ11036.1| ubiquitin carboxyl-terminal hydrolase 49 (predicted) [Callithrix
jacchus]
Length = 688
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + ++S
Sbjct: 651 ILFY---TQRTVQGNARISETHLQS 672
>gi|224010108|ref|XP_002294012.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970684|gb|EED89021.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1472
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 76/133 (57%), Gaps = 14/133 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--------EG-IFGGKIDKAIAFE-EVLVLSSF 58
CKK V A K +++ +P++LV+ LKRF +G I KI+ + F + L L+ +
Sbjct: 1308 CKKHVCALKLITLWNTPDVLVLHLKRFTYEKCSQVDGRIIRSKIEDKVDFPIDRLDLTPY 1367
Query: 59 MCKASQDPQ--PEYKLFGTIVHSGFSPDSGHYYAYIKDA-IGRWYCCNDSYVSVSTLQEV 115
+ +DP P YKLFG H+G + +SGHY A ++++ G WY NDS+V ++
Sbjct: 1368 VL-GPKDPDAPPIYKLFGVSEHTGATANSGHYTATVRNSKDGNWYRYNDSHVGTTSGDAA 1426
Query: 116 LSEKVYILFFIRA 128
++ Y+LF+ RA
Sbjct: 1427 VTGGAYLLFYQRA 1439
>gi|291389751|ref|XP_002711327.1| PREDICTED: ubiquitin thiolesterase 44 [Oryctolagus cuniculus]
Length = 698
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 540 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 597
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 598 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 657
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 658 ILFY---TQR-VTENG 669
>gi|169731527|gb|ACA64898.1| ubiquitin carboxyl-terminal hydrolase 49 (predicted) [Callicebus
moloch]
Length = 688
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + ++S
Sbjct: 651 ILFY---TQRTVQGNARISETHLQS 672
>gi|254577285|ref|XP_002494629.1| ZYRO0A05962p [Zygosaccharomyces rouxii]
gi|238937518|emb|CAR25696.1| ZYRO0A05962p [Zygosaccharomyces rouxii]
Length = 465
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C +A K++ I + P +LV+QLKRFE G K++ + F L + ++ C
Sbjct: 342 CNTTQNAIKRLIIHKLPAVLVLQLKRFEHHLNGNSAKLNDIVEFPLFLNMRNY-CDGDDV 400
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P ++L G I H G + + GHY A+ K G W+ NDS VS T +E+L E+ Y+LF+
Sbjct: 401 PDIIFELIGIIAHRG-TVNEGHYIAFTKVTTGHWFKFNDSMVSSITEEELLQEQAYLLFY 459
Query: 126 I 126
+
Sbjct: 460 V 460
>gi|345806352|ref|XP_851787.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-Q 67
C + V A K +++ SP +L++ L+RF + G K+ K + + E L + C + Q
Sbjct: 258 CLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVRYPERLDMQH--CLSEQRAGL 315
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G S SGHY+ ++K G+WY +D+ VS + L + YILF+++
Sbjct: 316 LVYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALHQPAYILFYMQ 375
>gi|321249377|ref|XP_003191439.1| hypothetical protein CGB_A4490C [Cryptococcus gattii WM276]
gi|317457906|gb|ADV19652.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 643
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF--------GGKIDKAIAFEEVLVLSSFMC 60
CK +A K + Q+P +L + LKRF + K ++ I FE+ L ++ +M
Sbjct: 334 CKCKANATKSFKVDQAPPVLTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQNLDMAPYMV 393
Query: 61 KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 120
+ P +Y+LFG H G GHY +Y++ G+W+ +D VS L++VL++K
Sbjct: 394 DP-KSPGSKYRLFGVTCHRGTELRFGHYTSYVRSPSGQWFHADDDDVSPVQLEQVLNDKT 452
Query: 121 -YILFFIR 127
Y+L +IR
Sbjct: 453 AYLLSYIR 460
>gi|332205971|ref|NP_001193780.1| inactive ubiquitin carboxyl-terminal hydrolase 44 isoform 1 [Mus
musculus]
gi|425906060|sp|Q8C2S0.3|UBP44_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 44; AltName:
Full=Deubiquitinating enzyme 44; AltName: Full=Ubiquitin
thioesterase 44; AltName:
Full=Ubiquitin-specific-processing protease 44
Length = 711
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 18/143 (12%)
Query: 7 FSCKKLV--SARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFM 59
FS K +V A+KQ+ I P +L + LKRF + G KI + FEE L + +
Sbjct: 546 FSSKSVVFTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVVFEETLNMEPYC 603
Query: 60 CKASQDP-QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQE 114
C+ + + +PE Y L ++H G SGHY AY ++ G W CNDS +S+ T++E
Sbjct: 604 CRETLNALRPECFLYNLSAVVIHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMEE 663
Query: 115 VLSEKVYILFFIRANQRPVSANG 137
V + YILF+ QR V+ NG
Sbjct: 664 VRKAQAYILFY---TQR-VTENG 682
>gi|332819097|ref|XP_003310296.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Pan troglodytes]
Length = 247
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 38 IFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG 97
+ G K+ K + + E L + +M + ++ P Y L+ +VH+G+S +GHY++Y+K G
Sbjct: 3 VTGNKLAKNVQYPECLDMQPYMSQQNKGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEG 61
Query: 98 RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQ 130
+WY +D+ V+ S++ VLS++ Y+LF+I+ ++
Sbjct: 62 QWYKMDDAEVTASSVTSVLSQQAYVLFYIQKSE 94
>gi|345309059|ref|XP_001518088.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49
[Ornithorhynchus anatinus]
Length = 571
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS--- 63
L A+KQ+ I + P +L + LKRF + G KI + FE+VL + + C+ +
Sbjct: 234 LSEAKKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFEQVLTMEPYCCRDTLSS 291
Query: 64 -QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVY 121
+ Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 292 LEKEAFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 351
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V + ++N +++ +++ +P
Sbjct: 352 ILFY---TQRTVQGSADVSANHLRAQGPSGNSFRHTGPLIP 389
>gi|338718432|ref|XP_001496813.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Equus
caballus]
Length = 649
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 494 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 551
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 552 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 611
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ +G T P
Sbjct: 612 ILFY---TQRTVQGNARISETQLQAQVQSSNNDEGRPRTFP 649
>gi|71745874|ref|XP_827567.1| ubiquitin carboxyl-terminal hydrolase [Trypanosoma brucei TREU927]
gi|70831732|gb|EAN77237.1| ubiquitin carboxyl-terminal hydrolase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 445
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+L S + + + Q P +LV+ LKRF+ +G K + + E +FM + +
Sbjct: 325 CKRLRSGSRCVVVRQWPKLLVLHLKRFDE-YGKKNLVNVIYPE-----TFMTGGEKSLR- 377
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV----SVSTLQEVLSEKVYILF 124
Y L+G ++HSG + SGHY +Y++ A G WY CND + SV +QE+ EK YILF
Sbjct: 378 -YSLYGVLMHSG-TEMSGHYTSYVRVAFGEWYLCNDGAITPSRSVDVMQEL--EKAYILF 433
Query: 125 FIRANQ 130
+ Q
Sbjct: 434 YAEVPQ 439
>gi|261331770|emb|CBH14764.1| cysteine peptidase, Clan CA, family C19,putative [Trypanosoma
brucei gambiense DAL972]
Length = 445
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 15/126 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+L S + + + Q P +LV+ LKRF+ +G K + + E +FM + +
Sbjct: 325 CKRLRSGSRCVVVRQWPKLLVLHLKRFDE-YGKKNLVNVIYPE-----TFMTGGEKSLR- 377
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV----SVSTLQEVLSEKVYILF 124
Y L+G ++HSG + SGHY +Y++ A G WY CND + SV +QE+ EK YILF
Sbjct: 378 -YSLYGVLMHSG-TEMSGHYTSYVRVAFGEWYLCNDGAITPSRSVDVMQEL--EKAYILF 433
Query: 125 FIRANQ 130
+ Q
Sbjct: 434 YAEVPQ 439
>gi|149743167|ref|XP_001496043.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Equus
caballus]
Length = 712
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 15/134 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRDSLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LSPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFF---IRANQRP 132
ILF+ + N RP
Sbjct: 672 ILFYTQRVTENGRP 685
>gi|293334949|ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea mays]
gi|238006636|gb|ACR34353.1| unknown [Zea mays]
gi|414591099|tpg|DAA41670.1| TPA: ubiquitin carboxyl-terminal hydrolase [Zea mays]
Length = 552
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQDPQPE 69
LV+ARK I P I+++ LKRF G KI K + F LVLS + + +
Sbjct: 434 LVTARKSFKIHALPKIMILHLKRFSYGNNGSTKIYKPLGFTSELVLSRDLLSSPSQEGRK 493
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L TI H G P GHY A+ K A G+W +D V +VL ++ Y+LF+
Sbjct: 494 YELVATITHHGRDPYRGHYTAHAKHADGQWLRFDDDAVVPVGENDVLHDQAYVLFY 549
>gi|395820053|ref|XP_003783392.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Otolemur
garnettii]
Length = 712
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 555 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 612
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 613 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSLCTMDEVCKAQAY 672
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 673 ILFY---TQR-VTENG 684
>gi|332220806|ref|XP_003259547.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Nomascus
leucogenys]
Length = 658
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 500 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 557
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 558 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 617
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 618 ILFY---TQR-VTENG 629
>gi|297826715|ref|XP_002881240.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327079|gb|EFH57499.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1098
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 79/146 (54%), Gaps = 20/146 (13%)
Query: 1 MKDLCLFSCKKLV--SARKQMSILQSPNILVIQLKRFEGIFGGKIDK---AIAFEEVLVL 55
+DL + S K +V +A K++ + ++P +L I LKRF G+I K + F+E + L
Sbjct: 953 WEDLAVDSEKVIVKRAATKKVLVNKAPPVLTIHLKRFSQDARGRISKLSGHVDFQEFIDL 1012
Query: 56 SSFM-CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-------------WYC 101
S +M + S++ QP Y+L G + H G + GHY AYI+ WY
Sbjct: 1013 SQYMDTRCSEEDQPVYRLAGLVEHLG-TMRGGHYVAYIRGGHKEMRQSDIKEPNSSIWYH 1071
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+DS+V ++L+EVL + YILF+ R
Sbjct: 1072 ASDSFVRRASLEEVLRSEAYILFYER 1097
>gi|383422103|gb|AFH34265.1| ubiquitin carboxyl-terminal hydrolase 44 [Macaca mulatta]
Length = 713
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEEVL + + C+ + +
Sbjct: 555 LTEAQKQLMICHLPQVLRLHLKRFR--WSGCNNREKIGVHVGFEEVLNMEPYCCRETLKS 612
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 613 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 672
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 673 ILFY---TQR-VTENG 684
>gi|355748555|gb|EHH53038.1| hypothetical protein EGM_13596 [Macaca fascicularis]
Length = 648
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 493 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 550
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 551 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 610
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 611 ILFY---TQRTVQGNARISETHLQA 632
>gi|52000871|sp|Q70CQ1.1|UBP49_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 49; AltName:
Full=Deubiquitinating enzyme 49; AltName: Full=Ubiquitin
thioesterase 49; AltName:
Full=Ubiquitin-specific-processing protease 49
gi|40788035|emb|CAE51939.1| ubiquitin-specific proteinase 49 [Homo sapiens]
Length = 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 651 ILFY---TQRTVQGNARISETHLQA 672
>gi|355561688|gb|EHH18320.1| hypothetical protein EGK_14894 [Macaca mulatta]
Length = 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 651 ILFY---TQRTVQGNARISETHLQA 672
>gi|297692638|ref|XP_002823637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 1
[Pongo abelii]
gi|297692640|ref|XP_002823638.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 2
[Pongo abelii]
gi|297692642|ref|XP_002823639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 3
[Pongo abelii]
Length = 713
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 555 LTEAQKQLMICHLPQVLRLHLKRFR--WSGHNNREKIGVHVGFEEILNMEPYCCRETLKS 612
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 613 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 672
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 673 ILFY---TQR-VTENG 684
>gi|397473609|ref|XP_003808299.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 1 [Pan
paniscus]
gi|397473611|ref|XP_003808300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 2 [Pan
paniscus]
gi|397473613|ref|XP_003808301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 3 [Pan
paniscus]
Length = 712
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|391344661|ref|XP_003746614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 64E-like
[Metaseiulus occidentalis]
Length = 918
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVLSSFMCKASQ 64
CKK A K + + P IL +QLKRF+ + K++ + F EVL L+ F+ S+
Sbjct: 189 CKKKCDALKGLKFVSFPKILTLQLKRFDFDYLTMRRIKLNDRVEFPEVLDLNGFI--ESK 246
Query: 65 DPQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV 115
P+ E Y LF ++HSG S + GHYYAYI++ W+C ND+ V TL++V
Sbjct: 247 PPKTEYVYDLFAVLIHSG-SANGGHYYAYIRNKTD-WFCFNDNQVHRVTLEDV 297
>gi|395534119|ref|XP_003769095.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Sarcophilus
harrisii]
Length = 697
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 542 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDTLSS 599
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 600 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 659
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ + + + T P
Sbjct: 660 ILFY---TQRTVQGNAGISETQLQAQVRSNNSDEDRRLTFP 697
>gi|390468050|ref|XP_002752921.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Callithrix
jacchus]
Length = 697
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 539 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRSNREKIGVHVVFEEILNMEPYCCRETLKS 596
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 597 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 656
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 657 ILFY---TQR-VAENG 668
>gi|332824046|ref|XP_518467.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Pan
troglodytes]
gi|397526893|ref|XP_003833349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Pan paniscus]
Length = 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 651 ILFY---TQRTVQGNARISETHLQA 672
>gi|114646339|ref|XP_509280.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 2 [Pan
troglodytes]
gi|114646341|ref|XP_001144539.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 1 [Pan
troglodytes]
gi|332840085|ref|XP_003313917.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Pan
troglodytes]
Length = 712
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|281183212|ref|NP_001162221.1| ubiquitin carboxyl-terminal hydrolase 49 [Papio anubis]
gi|109071136|ref|XP_001085366.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 isoform 3
[Macaca mulatta]
gi|157939800|gb|ABW05539.1| ubiquitin carboxyl-terminal hydrolase 49 (predicted) [Papio anubis]
Length = 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 651 ILFY---TQRTVQGNARISETHLQA 672
>gi|403275841|ref|XP_003929632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Saimiri
boliviensis boliviensis]
Length = 711
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 553 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVVFEEILNMEPYCCRETLKS 610
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 611 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 670
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 671 ILFY---TQR-VTENG 682
>gi|332234267|ref|XP_003266332.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Nomascus
leucogenys]
Length = 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 651 ILFY---TQRTVQGNARISETHLQA 672
>gi|256079377|ref|XP_002575964.1| ubiquitin-specific peptidase 42 (C19 family) [Schistosoma mansoni]
gi|353233379|emb|CCD80734.1| ubiquitin-specific peptidase 42 (C19 family) [Schistosoma mansoni]
Length = 799
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+C +L +A ++ +I ++P IL+IQL RF K+D + F L FM ++ P
Sbjct: 363 NCHQLRAAMRKCTIYRAPPILIIQLNRFSR--HQKLDIRVDFPSSFNLRPFMTQSKGLPI 420
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
YKL+ + H G+S SGHY ++ G+W NDS+VS + VL + Y+LF+
Sbjct: 421 -LYKLYAIVNHEGYSCRSGHYVSFTLRH-GQWLSLNDSFVSTTNTDHVLRQSPYLLFY 476
>gi|403261912|ref|XP_003923346.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Saimiri
boliviensis boliviensis]
Length = 545
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 390 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 447
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 448 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 507
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + ++S
Sbjct: 508 ILFY---TQRTVQGNARISETHLQS 529
>gi|383860357|ref|XP_003705657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 35-like [Megachile
rotundata]
Length = 871
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVLSSFMCKASQ 64
C KL A++ + IL +P L++ LK F F K+ + + E + L + S
Sbjct: 664 CMKLCDAQRIIKILHAPTYLILILKHFRYDFDTRPRTKLRHKVMYNEHIQLP--VSTPSY 721
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK----V 120
Y+L+ +VHSG+S D GHY+ Y +D+ WY NDSYVS +T + K
Sbjct: 722 TSTETYQLYAAVVHSGYSMDYGHYFTYARDSKQNWYKFNDSYVSQTTFNDFKELKPPDTP 781
Query: 121 YILFFIRA 128
YILF+ +A
Sbjct: 782 YILFYEKA 789
>gi|297678107|ref|XP_002816922.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Pongo abelii]
Length = 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 651 ILFY---TQRTVQGNARISETHLQA 672
>gi|117646608|emb|CAL37419.1| hypothetical protein [synthetic construct]
Length = 711
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|12053161|emb|CAB66759.1| hypothetical protein [Homo sapiens]
gi|21265143|gb|AAH30704.1| Ubiquitin specific peptidase 44 [Homo sapiens]
gi|123979884|gb|ABM81771.1| ubiquitin specific peptidase 44 [synthetic construct]
gi|123994647|gb|ABM84925.1| ubiquitin specific peptidase 44 [synthetic construct]
gi|189055076|dbj|BAG38060.1| unnamed protein product [Homo sapiens]
gi|190690147|gb|ACE86848.1| ubiquitin specific peptidase 44 protein [synthetic construct]
gi|190691521|gb|ACE87535.1| ubiquitin specific peptidase 44 protein [synthetic construct]
Length = 712
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|426353137|ref|XP_004044055.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Gorilla
gorilla gorilla]
Length = 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 533 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 590
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 591 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 650
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 651 ILFY---TQRTVQGNARISETHLQA 672
>gi|41053756|ref|NP_956551.1| ubiquitin carboxyl-terminal hydrolase 44 [Danio rerio]
gi|82188491|sp|Q7ZUM8.1|UBP44_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 44; AltName:
Full=Deubiquitinating enzyme 44; AltName: Full=Ubiquitin
thioesterase 44; AltName:
Full=Ubiquitin-specific-processing protease 44
gi|28856210|gb|AAH48060.1| Zgc:55661 [Danio rerio]
gi|182891180|gb|AAI64039.1| Zgc:55661 protein [Danio rerio]
Length = 695
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKASQD- 65
L A+KQ+ + + P++L + LKRF + G KI + FE+ L + + CK S +
Sbjct: 560 LTEAQKQLMVHKLPHVLRLHLKRFR--WSGRNHREKIGVHVQFEQELNMEPYCCKDSGNL 617
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
P P+ Y+L ++H G SGHY A+ + G W CNDS +SV ++EV + Y
Sbjct: 618 PHPQHFLYQLSAVVMHHGKGFGSGHYTAFCYNTEGGFWVHCNDSKLSVCAVEEVCKAQAY 677
Query: 122 ILFFIRAN 129
ILF+ + N
Sbjct: 678 ILFYTQRN 685
>gi|401626223|gb|EJS44179.1| ubp8p [Saccharomyces arboricola H-6]
Length = 473
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 14/130 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C A KQ+ I + P++LV+QLKRFE + G K+D I F L + S+ K +
Sbjct: 339 CNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGTNRKLDDFIEFPTYLNMKSYCSKGESE 398
Query: 66 ----------PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV 115
P Y+L G + H G + + GHY A+ K + G+W+ NDS VS + + V
Sbjct: 399 SEKHIGNGKVPDIIYELIGIVSHRG-TVNEGHYIAFCKISGGQWFKFNDSMVSSISQEGV 457
Query: 116 LSEKVYILFF 125
L E+ Y+LF+
Sbjct: 458 LKEQAYLLFY 467
>gi|426373733|ref|XP_004053744.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 1
[Gorilla gorilla gorilla]
gi|426373735|ref|XP_004053745.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 2
[Gorilla gorilla gorilla]
Length = 712
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|60654387|gb|AAX29884.1| ubiquitin specific protease 44 [synthetic construct]
Length = 713
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|109134332|ref|NP_115523.2| ubiquitin carboxyl-terminal hydrolase 44 [Homo sapiens]
gi|109134334|ref|NP_001035862.1| ubiquitin carboxyl-terminal hydrolase 44 [Homo sapiens]
gi|300669621|sp|Q9H0E7.2|UBP44_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 44; AltName:
Full=Deubiquitinating enzyme 44; AltName: Full=Ubiquitin
thioesterase 44; AltName:
Full=Ubiquitin-specific-processing protease 44
gi|119617946|gb|EAW97540.1| ubiquitin specific peptidase 44, isoform CRA_a [Homo sapiens]
gi|119617947|gb|EAW97541.1| ubiquitin specific peptidase 44, isoform CRA_a [Homo sapiens]
gi|119617948|gb|EAW97542.1| ubiquitin specific peptidase 44, isoform CRA_a [Homo sapiens]
Length = 712
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|444318954|ref|XP_004180134.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
gi|387513176|emb|CCH60615.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
Length = 483
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 18/134 (13%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQD 65
C K A +Q+SIL+ I+VIQLKRFE + G KI+ + F L + SF + D
Sbjct: 345 CNKSQDANRQLSILKLAPIMVIQLKRFEHLITGSSVKINDFVEFPLHLNMKSFCTAPTPD 404
Query: 66 PQPE--------------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVST 111
P Y+L G + H G + + GHY Y K A G WY NDS V
Sbjct: 405 TDPTNLNEKTNKSTPDMIYELTGIVTHRG-TVNEGHYITYTKTADGVWYQFNDSVVMKVP 463
Query: 112 LQEVLSEKVYILFF 125
L+++L E+ Y+L +
Sbjct: 464 LEQMLKEQAYLLIY 477
>gi|402887281|ref|XP_003907025.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 1
[Papio anubis]
gi|402887283|ref|XP_003907026.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 2
[Papio anubis]
gi|402887285|ref|XP_003907027.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 isoform 3
[Papio anubis]
Length = 712
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ + +
Sbjct: 554 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRETLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 612 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|74870609|sp|Q9VRP5.2|UBP36_DROME RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
Length = 1085
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++
Sbjct: 360 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQ 418
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 419 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
>gi|24658617|ref|NP_729092.1| scrawny, isoform D [Drosophila melanogaster]
gi|23094118|gb|AAN12107.1| scrawny, isoform D [Drosophila melanogaster]
gi|209447207|gb|ACI47091.1| FI06147p [Drosophila melanogaster]
Length = 1038
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++
Sbjct: 360 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQ 418
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 419 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
>gi|386770655|ref|NP_001246639.1| scrawny, isoform G [Drosophila melanogaster]
gi|386770657|ref|NP_001246640.1| scrawny, isoform H [Drosophila melanogaster]
gi|383291776|gb|AFH04310.1| scrawny, isoform G [Drosophila melanogaster]
gi|383291777|gb|AFH04311.1| scrawny, isoform H [Drosophila melanogaster]
Length = 976
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++
Sbjct: 360 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQ 418
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 419 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
>gi|28416398|gb|AAO42671.1| AT31021p [Drosophila melanogaster]
Length = 1038
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++
Sbjct: 360 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQ 418
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 419 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
>gi|291000604|ref|XP_002682869.1| ubiquitin-specific processing protease [Naegleria gruberi]
gi|284096497|gb|EFC50125.1| ubiquitin-specific processing protease [Naegleria gruberi]
Length = 1073
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 66/123 (53%), Gaps = 6/123 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEV--LVLSSFMCKASQD 65
CKK V A KQ + SP IL+I LKRF FG + A+ + L LS +M + +D
Sbjct: 939 CKKHVCAFKQCCVWSSPEILIIHLKRFGFNRFGREKVNALVDYPIYNLDLSDYMVRKPED 998
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y LF H+G GHYY+Y K+ RWYC NDS VS T +E+ + Y+LF
Sbjct: 999 -HMLYDLFAISCHTG-GLYGGHYYSYAKNCEDSRWYCFNDSSVSPLTEKELKTSNAYMLF 1056
Query: 125 FIR 127
+ R
Sbjct: 1057 YQR 1059
>gi|255933251|ref|XP_002558096.1| Pc12g12880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582715|emb|CAP80915.1| Pc12g12880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1388
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKR---FEGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
CK VSA K+ + ++P+I+V+QLKR F G G KI I F E L LSS + +
Sbjct: 1197 CKTHVSATKKFELWRTPDIMVVQLKRFSQFRGRNGHKISTVIDFPFEGLDLSSRVEGPTG 1256
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYV-SVSTLQEVLSEKVYI 122
Y L H G S GHY A+IKD + G W CND+ +V+ LQ +++ Y+
Sbjct: 1257 GKSVVYDLIAVDNHVG-SMLGGHYTAFIKDFVTGAWVYCNDTSAKTVTNLQTIITSGAYL 1315
Query: 123 LFFIRANQR 131
LF+ R + R
Sbjct: 1316 LFYRRRSDR 1324
>gi|15208127|dbj|BAB63088.1| hypothetical protein [Macaca fascicularis]
Length = 550
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 395 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 452
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 453 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 512
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 513 ILFY---TQRTVQGNARISETHLQA 534
>gi|442630418|ref|NP_729093.2| scrawny, isoform I [Drosophila melanogaster]
gi|440215342|gb|AAN12108.2| scrawny, isoform I [Drosophila melanogaster]
Length = 886
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++
Sbjct: 270 CKKKVSATKQFSLERAPITLCIQLKRF-SMIGNKLTKQISFKSRIDLSKYAARSQAAQAQ 328
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 329 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 387
>gi|449481646|ref|XP_002189404.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Taeniopygia
guttata]
Length = 713
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 15/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ + + P +L + LKRF + G KI ++F+++L + + C+ S +
Sbjct: 555 LTEAQKQLMVCRLPQVLRLHLKRFR--WSGRNHREKIGVHVSFDQILNMEPYCCRESLKS 612
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
P+ Y L ++H G SGHY AY ++ G W CNDS +++ T++EV + Y
Sbjct: 613 LLPDCFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLNMCTMEEVCKAQAY 672
Query: 122 ILFFIRANQRPVSANG 137
ILF+ +QR ANG
Sbjct: 673 ILFY---SQRLTQANG 685
>gi|354478531|ref|XP_003501468.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like
[Cricetulus griseus]
Length = 715
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE L + + C+ + +
Sbjct: 557 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVVFEETLNMEPYCCRETLKA 614
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 615 LRPECFIYNLSAVVIHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVRKAQAY 674
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 675 ILFY---TQR-VTENG 686
>gi|359320975|ref|XP_532134.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Canis lupus
familiaris]
Length = 681
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 526 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 583
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 584 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 643
Query: 122 ILFFIRANQRPVSANGTFASNGVKS 146
ILF+ QR V N + +++
Sbjct: 644 ILFY---TQRTVQGNARISETQLQA 665
>gi|344264315|ref|XP_003404238.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49, partial
[Loxodonta africana]
Length = 428
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 273 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 330
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 331 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 390
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ +G T P
Sbjct: 391 ILFY---TQRTVQGNARISETQLQAQVQPSNTDEGKPRTFP 428
>gi|406602917|emb|CCH45581.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 358
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 11/125 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF----EGIFGGKIDKAIAFEEVLVLSSFMCKASQ 64
C + +A KQ+SIL+ PN+L +QLKRF + I KI+ I F + +S F ++
Sbjct: 234 CNQRTNATKQLSILKFPNVLSLQLKRFKHNNQSI---KIESFIKFPMFINMSEFATISNN 290
Query: 65 DPQP---EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
PQ Y+LF + H G S ++GHY IK+ G+W+ +DS V++ ++V + Y
Sbjct: 291 VPQAGALNYELFAVVCHIG-SVNTGHYITVIKNNEGKWFRFDDSVVTLLEWEQVSKLQAY 349
Query: 122 ILFFI 126
+LF++
Sbjct: 350 LLFYM 354
>gi|156547946|ref|XP_001604800.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 1
[Nasonia vitripennis]
Length = 881
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ V A KQ + + P +L +QLKRF + GGKI + I F++ + + ++ + + Q
Sbjct: 312 ACKRRVPATKQFILERPPKVLCVQLKRF-SVLGGKISRHIGFKQTVDMGPYVRRQPGE-Q 369
Query: 68 PE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
P Y+L + H G S + GHY A + + G++Y +DS V +L V+S YI+
Sbjct: 370 PSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFYSFDDSSVRPISLNNVVSTNAYIMI 429
Query: 125 F 125
F
Sbjct: 430 F 430
>gi|345485740|ref|XP_003425328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 3
[Nasonia vitripennis]
Length = 895
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ V A KQ + + P +L +QLKRF + GGKI + I F++ + + ++ + + Q
Sbjct: 319 ACKRRVPATKQFILERPPKVLCVQLKRF-SVLGGKISRHIGFKQTVDMGPYVRRQPGE-Q 376
Query: 68 PE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
P Y+L + H G S + GHY A + + G++Y +DS V +L V+S YI+
Sbjct: 377 PSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFYSFDDSSVRPISLNNVVSTNAYIMI 436
Query: 125 F 125
F
Sbjct: 437 F 437
>gi|405117812|gb|AFR92587.1| ubiquitin C-terminal hydrolase Ubp16 [Cryptococcus neoformans var.
grubii H99]
Length = 624
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--------KIDKAIAFEEVLVLSSFMC 60
CK+ +A K I Q+P IL + LKRF + K ++ I FE+ L ++ +M
Sbjct: 314 CKRKANATKSFKIDQAPPILTLHLKRFSVNYNHYSGRARAEKFNQPIKFEQTLDIAPYMV 373
Query: 61 KASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKV 120
+Y+LFG H G GHY +Y++ G+W+ +D VS L +VL++K
Sbjct: 374 NPGSSGT-KYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDDVSPVQLVQVLNDKT 432
Query: 121 -YILFFIRANQRPVSANGTFASNGVKSHENG 150
Y+L +IR G S VK NG
Sbjct: 433 AYLLSYIRVEN---GKEGLCESPAVKDRVNG 460
>gi|401623901|gb|EJS41980.1| ubp10p [Saccharomyces arboricola H-6]
Length = 767
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+++ L L+ + C ++D
Sbjct: 587 CHKTTNAIKHNSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CD-NKDL 644
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y++ + ++VL E Y L +
Sbjct: 645 PVKYQLLSVVVHEGRSLSSGHYIAHCKQPEGNWATYDDEYINKISERDVLKEPNAYYLLY 704
Query: 126 IR 127
R
Sbjct: 705 TR 706
>gi|341875422|gb|EGT31357.1| hypothetical protein CAEBREN_29462 [Caenorhabditis brenneri]
Length = 551
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFE-EVLVLSSFMCKASQDPQ 67
C + KQ+ I + P +L +Q+KRF+ GGKID I F + L + F+ + S +P
Sbjct: 428 CNTKQTCSKQLFIKKLPEVLCLQIKRFKD-GGGKIDTLIEFPMQSLSVDEFLTEDSDEPP 486
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L IVH G+ SGHY A+ + +WY +D+ V+ + + +K Y+L + +
Sbjct: 487 CTYELQSIIVHVGYGCQSGHYVAFGRRGGAKWYHFDDTKVTTAEPSLISKQKAYLLLYTK 546
Query: 128 ANQRP 132
++P
Sbjct: 547 TTRQP 551
>gi|148689617|gb|EDL21564.1| ubiquitin specific peptidase 44 [Mus musculus]
Length = 732
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 14/133 (10%)
Query: 7 FSCKKLV--SARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFM 59
FS K +V A+KQ+ I P +L + LKRF + G KI + FEE L + +
Sbjct: 567 FSSKSVVFTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVVFEETLNMEPYC 624
Query: 60 CKASQDP-QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQE 114
C+ + + +PE Y L ++H G SGHY AY ++ G W CNDS +S+ T++E
Sbjct: 625 CRETLNALRPECFLYNLSAVVIHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMEE 684
Query: 115 VLSEKVYILFFIR 127
V + YILF+ +
Sbjct: 685 VRKAQAYILFYTQ 697
>gi|24658632|ref|NP_729094.1| scrawny, isoform C [Drosophila melanogaster]
gi|23094120|gb|AAN12109.1| scrawny, isoform C [Drosophila melanogaster]
Length = 948
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++
Sbjct: 270 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQ 328
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 329 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 387
>gi|357485235|ref|XP_003612905.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514240|gb|AES95863.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 739
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 28/147 (19%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSF-MCKASQ 64
C + VS KQ+ + Q+P+I LKRF+ + KIDK I F L L + + S
Sbjct: 327 CNEEVSVEKQLMLDQTPSIAAFHLKRFKTVGNNAVEKIDKHINFPLELDLQPYTILNESD 386
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTL------------ 112
+ +Y L+ +VH+G S DSGHY+ +++ A W+ +DS V+ + L
Sbjct: 387 NASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVASAILVPLGRDLIVLQI 446
Query: 113 ------------QEVLSEKVYILFFIR 127
VLS++ YILF+ R
Sbjct: 447 TCLMIKVTKVSEGTVLSQEAYILFYAR 473
>gi|345485737|ref|XP_003425327.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 2
[Nasonia vitripennis]
Length = 888
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ V A KQ + + P +L +QLKRF + GGKI + I F++ + + ++ + + Q
Sbjct: 319 ACKRRVPATKQFILERPPKVLCVQLKRF-SVLGGKISRHIGFKQTVDMGPYVRRQPGE-Q 376
Query: 68 PE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
P Y+L + H G S + GHY A + + G++Y +DS V +L V+S YI+
Sbjct: 377 PSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFYSFDDSSVRPISLNNVVSTNAYIMI 436
Query: 125 F 125
F
Sbjct: 437 F 437
>gi|33589646|gb|AAQ22589.1| AT24152p [Drosophila melanogaster]
Length = 948
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++
Sbjct: 270 CKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARSQAAQAQ 328
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 329 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 387
>gi|344267622|ref|XP_003405665.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like [Loxodonta
africana]
Length = 712
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C+ S +
Sbjct: 554 LTEAQKQLMICHLPRVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCRESLKS 611
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +++ T+ EV + Y
Sbjct: 612 LRPESFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLNMCTMDEVCKAQAY 671
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 672 ILFY---TQR-VTENG 683
>gi|321449079|gb|EFX61718.1| hypothetical protein DAPPUDRAFT_16988 [Daphnia pulex]
Length = 194
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC-KASQDPQ 67
CK V A K+ SI ++PN+L IQLKRF G+ GGK+ K I F L L+ F+ ++S P
Sbjct: 76 CKSKVPATKKFSIERAPNVLCIQLKRF-GLMGGKMSKHIQFSRNLNLNRFLFHQSSGGPC 134
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
YK I H G S GHY A + + G+ Y +D V + +L +S Y+L +
Sbjct: 135 VTYKFVSLINHMGPSQHCGHYTAIAEASNGQLYLFDDCSVRLISLNVAMSTGAYVLIY 192
>gi|326430318|gb|EGD75888.1| hypothetical protein PTSG_11617 [Salpingoeca sp. ATCC 50818]
Length = 1046
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CK+ A KQM + + P+ LVI LKRF + K+D + F E L L ++ Q
Sbjct: 857 CKEPKEAEKQMEVWKLPDTLVIHLKRFSYNSWWRDKLDTLVDFPLEGLDLGPYVLDPQQH 916
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y L+G H G GHY AY D GRWY +DSYV + ++S Y LF+
Sbjct: 917 DSAVYDLYGVSNHMG-GLGGGHYTAYCLDTNGRWYEFDDSYVGEIAPKNIVSTSSYFLFY 975
Query: 126 IRANQ 130
R ++
Sbjct: 976 QRRSE 980
>gi|327272692|ref|XP_003221118.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-A-like [Anolis
carolinensis]
Length = 698
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 6 LFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMC 60
+++C + A+KQ+ + Q P +L + LKRF + G KI + F ++L + + C
Sbjct: 534 IYACDQCNKAQKQLMVCQLPQVLRLHLKRFR--WSGRNHREKIGVHVTFSQILNMEPYCC 591
Query: 61 KAS-QDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEV 115
+ S + P+ Y L ++H G SGHY AY ++ G W CNDS +++ T++EV
Sbjct: 592 RESLKSLVPDCFIYDLSAVVMHHGKGFGSGHYTAYCYNSDGGFWVHCNDSKLNMCTMEEV 651
Query: 116 LSEKVYILFFIRANQRPVSA 135
+ YILF+ QR + A
Sbjct: 652 CKAQAYILFY---TQRVIQA 668
>gi|255711630|ref|XP_002552098.1| KLTH0B07150p [Lachancea thermotolerans]
gi|238933476|emb|CAR21660.1| KLTH0B07150p [Lachancea thermotolerans CBS 6340]
Length = 756
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K IL++P L++ LK RF G K+ +A+++ L ++ F C+ S+
Sbjct: 585 CHKTTNASKHNFILRAPETLLVHLKKFRFNGTSSSKLKQAVSYPMFLDVTEF-CENSKTT 643
Query: 67 QP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK-VYILF 124
P +Y+L +VH G S SGHY A+ K G W +D Y++ + +++L E Y L
Sbjct: 644 LPVKYQLISVVVHEGRSLTSGHYIAHCKQPDGSWSTYDDEYINKISERQMLKEPGAYYLV 703
Query: 125 FIRANQRPV 133
+ R R V
Sbjct: 704 YTRLTPRSV 712
>gi|241997576|ref|XP_002433437.1| USP16, putative [Ixodes scapularis]
gi|215490860|gb|EEC00501.1| USP16, putative [Ixodes scapularis]
Length = 635
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE-GIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYK 71
+A Q+ +LQ P +L + LKRF+ G K+ + +AF L L + C + Y
Sbjct: 516 AAASLQLQVLQPPRVLTLHLKRFQQGSSLRKVQRHVAFPVELDLGPY-CSGQAEGCKSYT 574
Query: 72 LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRAN 129
L+G + HSG GHY AY++ A G W+ +D V+ + ++VL+ + Y+LF+ R +
Sbjct: 575 LYGVVEHSGRM-TGGHYVAYVRGAGGGWFYASDGRVAPAPQRKVLASQAYLLFYGRTD 631
>gi|118366697|ref|XP_001016564.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89298331|gb|EAR96319.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 751
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 6/127 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIF--GGKIDKAIAFE-EVLVLSSFMCKASQD 65
C + A+KQ+ I ++P IL + LKRF+ I+ KI I + + L + ++ +S
Sbjct: 618 CNQNNKAKKQVLISKTPYILTLHLKRFK-IYPKKRKITDFIKYPIQNLSIKQYVKNSSTS 676
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y L G IVHSG S DSGHY +Y+K RW+CC+D + + V+ ++VY+LF+
Sbjct: 677 GGYYYNLIGIIVHSG-SQDSGHYISYVKRE-NRWFCCDDGKYQEVSEKTVIKQEVYLLFY 734
Query: 126 IRANQRP 132
R + P
Sbjct: 735 QRIEESP 741
>gi|443702950|gb|ELU00773.1| hypothetical protein CAPTEDRAFT_224225 [Capitella teleta]
Length = 1175
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF---EGIFGGKIDKAIAF-EEVLVLSSFMC--KA 62
CK+ A KQ+SI + PN LVIQLKRF + KIDK I F L LS + +
Sbjct: 936 CKEHREATKQLSIWRLPNTLVIQLKRFSFRNFLLRDKIDKQINFPARGLDLSKYYIGNRP 995
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAY--------IKDAIGRWYCCNDSYVSVSTLQE 114
S +P P Y LFG + H G GHY AY K ++ W +DS VS S +
Sbjct: 996 SNEPPPIYDLFGVVNHHG-GIMGGHYTAYARCPDPQDAKRSLIDWRLFDDSIVSSSAESQ 1054
Query: 115 VLSEKVYILFFIRAN 129
V++ Y+LF+ R +
Sbjct: 1055 VVTRAAYVLFYRRRD 1069
>gi|241238064|ref|XP_002401245.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215496141|gb|EEC05782.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 587
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 21/154 (13%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C+ + KQ+++ + P + LKRFE F KI I+F + L +S FM + + P
Sbjct: 318 CQSYQESTKQLTMKKLPVVCSFHLKRFEHSRSFHKKISSLISFPQYLDMSPFMSSSPRAP 377
Query: 67 Q-----PE-------------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS 108
+ PE Y LF + HSG + ++GHY AYI+ RW+ C+D ++
Sbjct: 378 EAVAQAPEGAQEPSRPCHDNKYCLFAVVNHSG-TIETGHYTAYIRQHRDRWFKCDDHLIT 436
Query: 109 VSTLQEVLSEKVYILFFIRANQRPVSANGTFASN 142
++LQ+VL + Y+LF+ + + G+ +N
Sbjct: 437 RASLQDVLDSEGYLLFYHKQILEYEAQGGSIGAN 470
>gi|24658645|ref|NP_729095.1| scrawny, isoform B [Drosophila melanogaster]
gi|15292143|gb|AAK93340.1| LD40339p [Drosophila melanogaster]
gi|23094122|gb|AAN12111.1| scrawny, isoform B [Drosophila melanogaster]
gi|220947254|gb|ACL86170.1| Usp36-PB [synthetic construct]
Length = 968
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF I G K+ K I+F+ + LS + ++
Sbjct: 290 CKKKVSATKQFSLERAPITLCIQLKRFSMI-GNKLTKQISFKSRIDLSKYAARSQAAQAQ 348
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 349 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 407
>gi|442630420|ref|NP_647986.3| scrawny, isoform J [Drosophila melanogaster]
gi|440215343|gb|AAN12110.2| scrawny, isoform J [Drosophila melanogaster]
Length = 906
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CKK VSA KQ S+ ++P L IQLKRF + G K+ K I+F+ + LS + ++
Sbjct: 290 CKKKVSATKQFSLERAPITLCIQLKRF-SMIGNKLTKQISFKSRIDLSKYAARSQAAQAQ 348
Query: 69 --EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L + H G S GHY A G +Y +DSYV + V + YI+FF
Sbjct: 349 PLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 407
>gi|50306927|ref|XP_453439.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642573|emb|CAH00535.1| KLLA0D08459p [Kluyveromyces lactis]
Length = 750
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKK+ +A K I+++P LV+ LK RF G K+ +A+++ L L+ + C S
Sbjct: 576 CKKVTNALKSNKIIRAPETLVVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CHESISS 634
Query: 67 QP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILF 124
P Y+L +VH G S SGHY A+ K G W +D Y++ + +++L E Y L
Sbjct: 635 LPVRYQLISVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINKISEKQLLKEPNAYFLV 694
Query: 125 FIRANQRPV 133
+ R + V
Sbjct: 695 YTRLTPKSV 703
>gi|431905320|gb|ELK10365.1| Ubiquitin carboxyl-terminal hydrolase 44 [Pteropus alecto]
Length = 706
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 72/136 (52%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ I P +L + LKRF + G KI + FEE+L + + C S +
Sbjct: 550 LTEAQKQLMICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCCMESLKA 607
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV + Y
Sbjct: 608 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCFNSEGGFWVHCNDSKLSMCTMDEVCKAQAY 667
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 668 ILFY---TQR-VTENG 679
>gi|45185085|ref|NP_982802.1| ABL145Wp [Ashbya gossypii ATCC 10895]
gi|44980721|gb|AAS50626.1| ABL145Wp [Ashbya gossypii ATCC 10895]
Length = 749
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK +A K+ IL++P L++ LK RF G K+ +A+++ + L+ + +A++
Sbjct: 575 CKATTNAIKRNMILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPLFMDLTEYCVEAAKCL 634
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y++ T + VL E Y L +
Sbjct: 635 PVKYQLISVVVHEGRSLSSGHYIAHCKQPDGTWATYDDEYINKITERNVLKEVNAYYLVY 694
Query: 126 IRANQRPV 133
R + V
Sbjct: 695 TRLTPKSV 702
>gi|410959270|ref|XP_003986235.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Felis catus]
Length = 545
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 390 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLNMEPYCCRDMLSS 447
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 448 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 507
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V N + +++ +G T P
Sbjct: 508 ILFY---TQRTVQGNARISETQLQAQVQPSNNDEGRPRTFP 545
>gi|374106004|gb|AEY94914.1| FABL145Wp [Ashbya gossypii FDAG1]
Length = 749
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK +A K+ IL++P L++ LK RF G K+ +A+++ + L+ + +A++
Sbjct: 575 CKATTNAIKRNMILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPLFMDLTEYCVEAAKCL 634
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY A+ K G W +D Y++ T + VL E Y L +
Sbjct: 635 PVKYQLISVVVHEGRSLSSGHYIAHCKQPDGTWATYDDEYINKITERNVLKEVNAYYLVY 694
Query: 126 IRANQRPV 133
R + V
Sbjct: 695 TRLTPKSV 702
>gi|332025734|gb|EGI65892.1| Ubiquitin carboxyl-terminal hydrolase 38 [Acromyrmex echinatior]
Length = 882
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-- 66
C KL A++ ++ILQ+P L++ LK F F ++ + +V+ + S P
Sbjct: 675 CTKLCDAQRIITILQAPAHLILTLKHFRYDFDSRLRTKLR-HKVVYNDTIQLPVSAIPYT 733
Query: 67 -QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK----VY 121
Y L+ +VHSG+S D GHY+ Y D+ WY NDS+V+ +T ++ S K Y
Sbjct: 734 VAETYHLYAAVVHSGYSMDYGHYFTYACDSKQNWYKFNDSFVTQTTFEDFKSLKPPDTPY 793
Query: 122 ILFF 125
ILF+
Sbjct: 794 ILFY 797
>gi|50305101|ref|XP_452509.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641642|emb|CAH01360.1| KLLA0C06974p [Kluyveromyces lactis]
Length = 446
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQ 64
SCK+ KQ+++ ++PN+LVIQLKRFE G K++ + F L L + +
Sbjct: 322 SCKQNQGVVKQLTLHKAPNVLVIQLKRFEHQLNGQSAKLNDRVQFPLHLNLKPHLFQIED 381
Query: 65 D--PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 122
+ P Y L + H G + D GHY K G+W+ NDS V+ T ++VL ++ Y+
Sbjct: 382 EYIPNIAYDLLNVVSHQG-TVDQGHYTTVSKTEDGQWFKFNDSVVTSVTEEQVLEQQAYL 440
Query: 123 LFFI 126
LF+I
Sbjct: 441 LFYI 444
>gi|413949782|gb|AFW82431.1| hypothetical protein ZEAMMB73_110675, partial [Zea mays]
Length = 284
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 43/55 (78%)
Query: 5 CLFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFM 59
C SCKKL SARKQM +L++P +LVIQLKRFEGI GGKI++ I F+E L LS M
Sbjct: 219 CCESCKKLTSARKQMFMLRAPKVLVIQLKRFEGINGGKINRNIEFKEALDLSDCM 273
>gi|303284199|ref|XP_003061390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456720|gb|EEH54020.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 308
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ--PE 69
+ A KQ +I +P +L IQ RF K+++ + + L +S M AS +
Sbjct: 197 MTRATKQFTIDAAPKVLTIQ-ARFTR---RKLNQFVEYPTRLDVSEAMSDASPRARGRER 252
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y LFG +VHSG S SGHYY Y+K + G WY +D VS + + LS++ Y+LF+
Sbjct: 253 YSLFGVLVHSGGSMHSGHYYCYVKGSTGHWYEMDDEGVSPVSEKTALSQRAYLLFY 308
>gi|324505218|gb|ADY42247.1| Ubiquitin carboxyl-terminal hydrolase 36 [Ascaris suum]
Length = 699
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ A++ ++++P++LV+QLKRF G KI + E + L FM A D +
Sbjct: 582 CKRKTQAQRVTRVIRAPHVLVVQLKRFNAC-GSKIRLPVTIEMNVKLDRFMYLA--DDRN 638
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L G I H G D GHY A+++ G+ W+C +D ++++V + Y++ + R
Sbjct: 639 AYSLCGLIEHQGEGIDRGHYIAFVRGFDGKGWHCFDDETCQRVSVEDVCKRQGYVMVYTR 698
Query: 128 A 128
+
Sbjct: 699 S 699
>gi|17064774|gb|AAL32541.1| Unknown protein [Arabidopsis thaliana]
Length = 961
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 14/126 (11%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDK---AIAFEEVLVLSSFM-CKASQDPQPEY 70
A K++ I ++P +L I LKRF G++ K +AF+EV+ L +M + S + P Y
Sbjct: 832 ATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVY 891
Query: 71 KLFGTIVHSGFSPDSGHYYAYIK---------DAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
+L G + HSG + GHY AY++ + WY +D+YV +L++VL + Y
Sbjct: 892 RLAGLVEHSG-TMRGGHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSEAY 950
Query: 122 ILFFIR 127
ILF+ R
Sbjct: 951 ILFYER 956
>gi|18390446|ref|NP_563719.1| ubiquitin carboxyl-terminal hydrolase 2 [Arabidopsis thaliana]
gi|62901383|sp|Q8W4N3.2|UBP2_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=Deubiquitinating enzyme 2; Short=AtUBP2; AltName:
Full=Ubiquitin thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|7211980|gb|AAF40451.1|AC004809_9 Strong similarity to the putative ubiquitin-specific protease
F24L7.8 from A. thaliana gi|2914695 on BAC gb|AC003974
and to ubiquitin carboxyl-terminal hydrolase family
PF|00442 and PF|00443. ESTs gb|Z17750 and gb|Z17572 come
from this gene [Arabidopsis thaliana]
gi|11993463|gb|AAG42750.1|AF302659_1 ubiquitin-specific protease 2 [Arabidopsis thaliana]
gi|332189631|gb|AEE27752.1| ubiquitin carboxyl-terminal hydrolase 2 [Arabidopsis thaliana]
Length = 961
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 14/126 (11%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDK---AIAFEEVLVLSSFM-CKASQDPQPEY 70
A K++ I ++P +L I LKRF G++ K +AF+EV+ L +M + S + P Y
Sbjct: 832 ATKKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVY 891
Query: 71 KLFGTIVHSGFSPDSGHYYAYIK---------DAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
+L G + HSG + GHY AY++ + WY +D+YV +L++VL + Y
Sbjct: 892 RLAGLVEHSG-TMRGGHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSEAY 950
Query: 122 ILFFIR 127
ILF+ R
Sbjct: 951 ILFYER 956
>gi|302772254|ref|XP_002969545.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
gi|300163021|gb|EFJ29633.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
Length = 374
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C V A+K++S+ ++PNIL I LKRF+G GKI+K + F E L + +M + D P
Sbjct: 269 CNAYVRAKKRLSVHEAPNILTIALKRFQGGKFGKINKKVTFPEELDMVPYM-SGTVDTPP 327
Query: 69 EYKLFGTIVHSGFSPDS--GHYYAYIKDAIGRWYCCNDSYVS 108
Y+L+ +VH S GHY Y++ G W+ +DS VS
Sbjct: 328 AYELYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVS 369
>gi|449517900|ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 621
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK+ V KQ+ + + P + LKRF + F KI+K + F L L + +D
Sbjct: 272 NCKEEVWVEKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTL-GGKD 330
Query: 66 PQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ E Y+L+ + H+GFS SGHY+++++ + W+ +DS V+ T + VLS + YIL
Sbjct: 331 AEVELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYIL 390
Query: 124 FFIR 127
+ R
Sbjct: 391 LYKR 394
>gi|222616349|gb|EEE52481.1| hypothetical protein OsJ_34660 [Oryza sativa Japonica Group]
Length = 1609
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 21 ILQSPNILVIQLKRFEGIF---GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 77
I ++P +L IQLKRFE + GKI++ + F+E L ++ +M D + +Y L IV
Sbjct: 1466 INKAPPVLTIQLKRFEFVHDDGSGKIEEHVIFQETLDITKYMDTRYLDNEYKYCLVAVIV 1525
Query: 78 HSGFSPDSGHYYAYIKDA-----------IGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
H G D GHY+AY++ + W+ ND V + VL + YILF+
Sbjct: 1526 HGGQKLDGGHYFAYVRASRTGGQKRESSDTHSWFLANDEKVEEVLFENVLKCEAYILFYE 1585
Query: 127 RA 128
R
Sbjct: 1586 RV 1587
>gi|108864585|gb|ABA94767.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2446
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 14/121 (11%)
Query: 21 ILQSPNILVIQLKRFEGIF---GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 77
I ++P +L IQLKRFE + GKI++ + F+E L ++ +M D + +Y L IV
Sbjct: 2303 INKAPPVLTIQLKRFEFVHDDGSGKIEEHVIFQETLDITKYMDTRYLDNEYKYCLVAVIV 2362
Query: 78 HSGFSPDSGHYYAYIKDA-----------IGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
H G D GHY+AY++ + W+ ND V + VL + YILF+
Sbjct: 2363 HGGQKLDGGHYFAYVRASRTGGQKRESSDTHSWFLANDEKVEEVLFENVLKCEAYILFYE 2422
Query: 127 R 127
R
Sbjct: 2423 R 2423
>gi|391340120|ref|XP_003744393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Metaseiulus occidentalis]
Length = 465
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 18/134 (13%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG--IFGGKIDKAIAFEEVLVLSSFMCK----- 61
C + KQ++ + P ++ LKRFE + K+ IAF + L LS +M K
Sbjct: 323 CNSYQESTKQLTFKKLPLVVSFHLKRFEHSKLLHKKVSTPIAFPQQLDLSPYMAKPEEQE 382
Query: 62 ------ASQDP---QPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVST 111
S DP +P Y LFG ++H G + +GHY AYI+ + W+ C+D + +T
Sbjct: 383 EADPTSTSHDPSFSRPHTYSLFGVVIHQG-TLQTGHYTAYIRQSPNGWFKCDDCEIKTAT 441
Query: 112 LQEVLSEKVYILFF 125
++EVL+ + Y+LF+
Sbjct: 442 IEEVLNCEAYLLFY 455
>gi|158966727|ref|NP_957281.2| ubiquitin carboxyl-terminal hydrolase 20 [Danio rerio]
gi|148725228|emb|CAN88088.1| ubiquitin specific protease 20 [Danio rerio]
gi|148725501|emb|CAN88765.1| ubiquitin specific protease 20 [Danio rerio]
Length = 913
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K S
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLKPFLAKESPS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEESV 690
>gi|449462061|ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 676
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 5/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK+ V KQ+ + + P + LKRF + F KI+K + F L L + +D
Sbjct: 327 NCKEEVWVEKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTL-GGKD 385
Query: 66 PQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ E Y+L+ + H+GFS SGHY+++++ + W+ +DS V+ T + VLS + YIL
Sbjct: 386 AEVELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYIL 445
Query: 124 FFIR 127
+ R
Sbjct: 446 LYKR 449
>gi|449270154|gb|EMC80869.1| Ubiquitin carboxyl-terminal hydrolase 44, partial [Columba livia]
Length = 716
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ + + P +L + LKRF + G KI + F+++L + + C+ S +
Sbjct: 558 LTEAQKQLMVCRLPQVLRLHLKRFR--WSGRNHREKIGVHVHFDQMLNMEPYCCRESLKS 615
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
P+ Y L ++H G SGHY AY ++ G W CNDS +++ T++EV + Y
Sbjct: 616 LLPDCFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLNMCTMEEVCKAQAY 675
Query: 122 ILFFIRANQRPVSANG 137
ILF+ +QR ANG
Sbjct: 676 ILFY---SQRLTQANG 688
>gi|281312477|sp|A5PN09.1|UBP20_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
Length = 911
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K S
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLKPFLAKESPS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEESV 690
>gi|125535131|gb|EAY81679.1| hypothetical protein OsI_36850 [Oryza sativa Indica Group]
Length = 1307
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 21 ILQSPNILVIQLKRFEGIF---GGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIV 77
I ++P +L IQLKRFE + GKI++ + F+E L ++ +M D + +Y L IV
Sbjct: 1164 INKAPPVLTIQLKRFEFVHDDGSGKIEEHVIFQETLDITKYMDTRYLDNEYKYCLVAVIV 1223
Query: 78 HSGFSPDSGHYYAYIKDA-----------IGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
H G D GHY+AY++ + W+ ND V + VL + YILF+
Sbjct: 1224 HGGQKLDDGHYFAYVRASRTGGQKRESSDTHSWFLANDEKVEEVLFENVLKCEAYILFYE 1283
Query: 127 RA 128
R
Sbjct: 1284 RV 1285
>gi|444510625|gb|ELV09647.1| Ubiquitin carboxyl-terminal hydrolase 4 [Tupaia chinensis]
Length = 898
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 737 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRALNMSEFVCDLSA 796
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + GRWY +DS VS+++ +++++ Y+L
Sbjct: 797 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGRWYYFDDSNVSLASEDQIVTKAAYVL 854
Query: 124 FFIRANQRPVSANG 137
F+ R ++ S G
Sbjct: 855 FYQRRDEETPSLTG 868
>gi|118082513|ref|XP_416154.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Gallus gallus]
Length = 714
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ + + P +L + LKRF + G KI + F+++L + + C+ S +
Sbjct: 557 LTEAQKQLMVCRLPQVLRLHLKRFR--WSGRNHREKIGVHVNFDQILNMEPYCCRESLKS 614
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
P+ Y L ++H G SGHY AY ++ G W CNDS +++ T++EV + Y
Sbjct: 615 LLPDCFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLNMCTMEEVCKAQAY 674
Query: 122 ILFFIRANQRPVSANG 137
ILF+ +QR ANG
Sbjct: 675 ILFY---SQRLSQANG 687
>gi|18422708|ref|NP_568667.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
gi|75262521|sp|Q9FIQ1.1|UBP21_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; Short=AtUBP21; AltName:
Full=Ubiquitin thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|9758510|dbj|BAB08918.1| unnamed protein product [Arabidopsis thaliana]
gi|332008037|gb|AED95420.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
Length = 732
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK+ V+ KQ+ + P + LKRF +G+ KI I F L LS FM ++ D
Sbjct: 346 NCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFM-SSNHD 404
Query: 66 PQ--PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P+ Y L+ + H G GHY +Y++ A W+ +DS V+ + + VLS YIL
Sbjct: 405 PEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYIL 464
Query: 124 FFIR 127
F+ R
Sbjct: 465 FYAR 468
>gi|326911682|ref|XP_003202185.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like [Meleagris
gallopavo]
Length = 714
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 15/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ + + P +L + LKRF + G KI + F+++L + + C+ S +
Sbjct: 557 LTEAQKQLMVCRLPQVLRLHLKRFR--WSGRNHREKIGVHVNFDQILNMEPYCCRESLKS 614
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
P+ Y L ++H G SGHY AY ++ G W CNDS +++ T++EV + Y
Sbjct: 615 LLPDCFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLNMCTMEEVCKAQAY 674
Query: 122 ILFFIRANQRPVSANG 137
ILF+ +QR ANG
Sbjct: 675 ILFY---SQRLSQANG 687
>gi|365988142|ref|XP_003670902.1| hypothetical protein NDAI_0F03410 [Naumovozyma dairenensis CBS 421]
gi|343769673|emb|CCD25659.1| hypothetical protein NDAI_0F03410 [Naumovozyma dairenensis CBS 421]
Length = 870
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K+ +IL++P LV+ LK RF G K+ +A+++ L ++ + C++S+
Sbjct: 698 CNKTTNAIKRSTILRAPETLVVHLKKFRFNGSTSSKMKQAVSYPMYLDITEY-CESSKKV 756
Query: 67 QP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS-VSTLQEVLSEKVYILF 124
P +Y+L +VH G S SGHY A+ + G W +D ++ +S L+ + Y L
Sbjct: 757 LPAKYQLLSVVVHEGRSLSSGHYIAHCRQPDGTWATYDDELINKISELKLLTEPNAYYLV 816
Query: 125 FIRANQRPVSANGTFASNGV 144
+ R R + + N V
Sbjct: 817 YTRLTPRAIPLKDSLPKNKV 836
>gi|290998513|ref|XP_002681825.1| ubiquitin specific protease [Naegleria gruberi]
gi|284095450|gb|EFC49081.1| ubiquitin specific protease [Naegleria gruberi]
Length = 868
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 81/124 (65%), Gaps = 6/124 (4%)
Query: 7 FSCKK---LVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS 63
+ C K V+A K+++I ++P L++QLKRF IFG K+ K I++E+ L +S +M ++
Sbjct: 384 YKCPKTNTYVTASKKLTIHEAPINLILQLKRF-NIFGKKVSKKISYEDTLDISPYM--SN 440
Query: 64 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
++ Y L+G +VHSG S SGHYY+++K++ G WY +DS V+ + L ++ Y+L
Sbjct: 441 KNTVARYSLYGVLVHSGGSSSSGHYYSFVKNSNGIWYRMDDSSVTQVSQNTALGQQAYML 500
Query: 124 FFIR 127
F+ R
Sbjct: 501 FYSR 504
>gi|11993482|gb|AAG42759.1|AF302669_1 ubiquitin-specific protease 21 [Arabidopsis thaliana]
Length = 737
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK+ V+ KQ+ + P + LKRF +G+ KI I F L LS FM ++ D
Sbjct: 346 NCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFM-SSNHD 404
Query: 66 PQ--PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P+ Y L+ + H G GHY +Y++ A W+ +DS V+ + + VLS YIL
Sbjct: 405 PEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYIL 464
Query: 124 FFIR 127
F+ R
Sbjct: 465 FYAR 468
>gi|345484473|ref|XP_001604649.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 35-like isoform 1
[Nasonia vitripennis]
Length = 942
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF----EGIFGGKIDKAIAFEEVLVLSSFMCKASQ 64
C L A++ + I+Q+P+ L++ LK F E K+ + + + E + L
Sbjct: 726 CAGLCDAQRSIKIVQAPSHLILTLKHFRYDSESRLRTKLSRKVIYNETIQLPVL------ 779
Query: 65 DPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS----EK 119
D E Y+L+ +VHSG+S D GHY Y DA WY NDSYV+ +T+++ +
Sbjct: 780 DQNNETYQLYAAVVHSGYSLDYGHYITYACDAKNNWYLFNDSYVAQTTIEDFKRLEPPDT 839
Query: 120 VYILFF 125
YILF+
Sbjct: 840 PYILFY 845
>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
SS1]
Length = 1408
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 25/143 (17%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKA-- 62
+CK L A KQ+S+ + P +L+IQ KRF +G F KIDK + F + L L+++M
Sbjct: 1265 NCKVLRKATKQLSLSRLPPVLLIQFKRFSFKGPFTDKIDKHVDFPLKGLELTNYMPPPLP 1324
Query: 63 ------------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCND 104
Q P +Y L+ H G S SGHY A+I ++ G+W C+D
Sbjct: 1325 PGVDRGQAAVQYGNDDPRQQTPPYKYDLYAVTNHFG-SLSSGHYTAFI-NSRGQWLYCDD 1382
Query: 105 SYVSVSTLQEVLSEKVYILFFIR 127
S ++ S +EV+ + Y+L++ R
Sbjct: 1383 SRITPSDAKEVVGKPAYVLYYKR 1405
>gi|344238308|gb|EGV94411.1| Ubiquitin carboxyl-terminal hydrolase 49 [Cricetulus griseus]
Length = 617
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 462 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 519
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS + V +++EV + Y
Sbjct: 520 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEEVCKTQAY 579
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ R R V + + +++ +G T P
Sbjct: 580 ILFYTR---RTVQGSARLSEPQLRAQVQSSSKDEGRTYTFP 617
>gi|326933885|ref|XP_003213028.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49-like [Meleagris
gallopavo]
Length = 958
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 12 LVSARKQMSILQSPNILVIQLKRF---EGIFGGKIDKAIAFEEVLVLSSFMCK---ASQD 65
L A+KQ+ I + P +L + LKRF E KI + F++VL + + C+ +S D
Sbjct: 542 LSEAKKQLMIYRLPQVLRLHLKRFRWSERNHREKIGVHVLFDQVLNMEPYCCRDSLSSLD 601
Query: 66 PQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ Y L ++H G SGHY AY + G W CNDS ++V +++EV + YIL
Sbjct: 602 KETFVYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAYIL 661
Query: 124 FFIRANQRPVSANGTFASNGVKSHENGKEAYKG 156
F+ QR V + +++ G A +G
Sbjct: 662 FY---TQRTVQDKARISEKQLQAQGKGLAAGRG 691
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEV-LVLSSFMCKASQDPQ 67
CK + KQM I + P +L + +KRF GGKID I F L + F+ + S +P
Sbjct: 416 CKSKQTCSKQMFIKKLPEVLCLHIKRFRDN-GGKIDTLIEFPLTGLSVDDFLTEDSDEPP 474
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y+L IVH G+ SGHY A+ + +WY +D+ V + ++ Y+L + +
Sbjct: 475 CVYELHSIIVHIGYGCSSGHYIAFGRRG-AKWYQFDDTVVKAMETSNITKQRAYVLMYTK 533
Query: 128 ANQRP 132
+ ++P
Sbjct: 534 STRKP 538
>gi|303284907|ref|XP_003061744.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457074|gb|EEH54374.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 390
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKAS---QD 65
C V A K I SPN+LV+ LKRF+ KI K + F L LS +M + D
Sbjct: 260 CDAYVRATKGSKIHVSPNVLVVPLKRFQIGRFSKITKWVEFPVHLDLSPYMSSDAPLEGD 319
Query: 66 PQPEYKLFGTIVHSGF--SPDSGHYYAYIK--DAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
P Y L+G +VH F S SGHY +++K D + W C+D V+ + VL +K Y
Sbjct: 320 APPTYALYGVVVHLDFCGSAHSGHYVSFVKLNDDV-TWCKCDDGRVTETDEATVLKQKAY 378
Query: 122 ILFFIRANQR 131
+LF+ R R
Sbjct: 379 LLFYERERVR 388
>gi|345484477|ref|XP_003425049.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 35-like isoform 3
[Nasonia vitripennis]
Length = 926
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF----EGIFGGKIDKAIAFEEVLVLSSFMCKASQ 64
C L A++ + I+Q+P+ L++ LK F E K+ + + + E + L
Sbjct: 710 CAGLCDAQRSIKIVQAPSHLILTLKHFRYDSESRLRTKLSRKVIYNETIQLPVL------ 763
Query: 65 DPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS----EK 119
D E Y+L+ +VHSG+S D GHY Y DA WY NDSYV+ +T+++ +
Sbjct: 764 DQNNETYQLYAAVVHSGYSLDYGHYITYACDAKNNWYLFNDSYVAQTTIEDFKRLEPPDT 823
Query: 120 VYILFF 125
YILF+
Sbjct: 824 PYILFY 829
>gi|38259220|ref|NP_940813.1| ubiquitin carboxyl-terminal hydrolase 49 [Mus musculus]
gi|52000870|sp|Q6P9L4.1|UBP49_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 49; AltName:
Full=Deubiquitinating enzyme 49; AltName: Full=Ubiquitin
thioesterase 49; AltName:
Full=Ubiquitin-specific-processing protease 49
gi|38174228|gb|AAH60712.1| Ubiquitin specific peptidase 49 [Mus musculus]
Length = 685
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 12/126 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 530 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVIFDQVLTMEPYCCRDMLSS 587
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS + V +++EV + Y
Sbjct: 588 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEEVCKTQAY 647
Query: 122 ILFFIR 127
ILF+ R
Sbjct: 648 ILFYTR 653
>gi|297791015|ref|XP_002863392.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
gi|297309227|gb|EFH39651.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK+ V+ KQ+ Q P + LKRF +G+ KI + + F L L FM ++Q+
Sbjct: 325 NCKEKVTKEKQLKFDQLPPVATFHLKRFKNDGVTMEKIFEHVEFPLELDLLPFM-SSNQN 383
Query: 66 PQ--PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P+ +Y L+ + H G GHY Y++ A W+ +DS V+ + VLS YIL
Sbjct: 384 PEVSTKYHLYAFVEHIGIGATFGHYSTYVRSAPETWHNFDDSKVTRISEDRVLSRPAYIL 443
Query: 124 FFIRANQRPVSA 135
F+ R R S+
Sbjct: 444 FYAREGTRWFSS 455
>gi|397567796|gb|EJK45783.1| hypothetical protein THAOC_35581 [Thalassiosira oceanica]
Length = 578
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 12/132 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE---------GIFGGKIDKAIAFE-EVLVLSS 57
SCK+ V A K + + +P+++V+ +KRF I KI++ + F + L LS
Sbjct: 414 SCKRHVCALKHIQLWNTPDVIVLHMKRFTFEKCPDEDGKIIRRKIEETVDFPIDRLDLSP 473
Query: 58 FMCKAS-QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA-IGRWYCCNDSYVSVSTLQEV 115
++ +D P Y+LFG H+G + +SGHY A ++++ G WY NDS+V S+
Sbjct: 474 YVYGPKYEDAPPVYRLFGVSEHTGATANSGHYTATVRNSGDGNWYRYNDSHVGSSSGDAA 533
Query: 116 LSEKVYILFFIR 127
++ Y+LF+ R
Sbjct: 534 VTGGAYLLFYQR 545
>gi|312069228|ref|XP_003137584.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
gi|307767248|gb|EFO26482.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 657
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 6/130 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ ++ IL++PN+L+IQ+KRF FGGKI + F L L ++ + +
Sbjct: 498 NCKRTTQIQRSSRILRAPNLLLIQIKRFNS-FGGKIGVHVNFSLRLDLQQYIHRTGE--S 554
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L G + H G + + GHY A ++ GR +Y +D +L E+ + + YIL ++
Sbjct: 555 HVYELTGIVQHMGNAVEHGHYIAVVRGFDGRSYYLFDDEQRHRVSLSELHNTQAYILLYV 614
Query: 127 R--ANQRPVS 134
R A + PVS
Sbjct: 615 RCDAFRNPVS 624
>gi|224138132|ref|XP_002326526.1| predicted protein [Populus trichocarpa]
gi|222833848|gb|EEE72325.1| predicted protein [Populus trichocarpa]
Length = 835
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMC--KAS 63
SCK+ VS KQ+ + Q+P++ + LK F +G KI K + F L L + + S
Sbjct: 459 SCKEEVSREKQLMLDQAPSVAALHLKIFKIDGTSVEKIGKHVQFPLELDLKPYTNDNEDS 518
Query: 64 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ +Y+L+ +VH G S SGHY+ YI+ + W+ +D VS + VLS+ YIL
Sbjct: 519 DEVGFKYQLYAVVVHKGDSLMSGHYFCYIRSSPDTWHKLDDPEVSKEQEEFVLSQAAYIL 578
Query: 124 FFIR 127
F+ R
Sbjct: 579 FYAR 582
>gi|242004654|ref|XP_002423195.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Pediculus
humanus corporis]
gi|212506160|gb|EEB10457.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Pediculus
humanus corporis]
Length = 479
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 8/142 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + VS K+ +I + PN+L +QLKRF + GKI K + + L ++ F+ + P
Sbjct: 309 CNRKVSVYKKFTIEKPPNVLCVQLKRF-SMTNGKITKQVQLPQYLDITRFISTSIHPRHP 367
Query: 69 -EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF--- 124
+YKL I H G S + GHY A A G +Y +DS V L VLS Y++
Sbjct: 368 VKYKLVSMITHMGQSVNCGHYTAIALAANGSYYQFDDSSVRQIPLSTVLSMSAYLILYEM 427
Query: 125 ---FIRANQRPVSANGTFASNG 143
F N RP ++ + NG
Sbjct: 428 ERPFQTVNPRPFTSISSTVWNG 449
>gi|344271628|ref|XP_003407639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Loxodonta
africana]
Length = 911
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 560 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINNHVSFPLEGLDLRPFLAKECMS 619
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 620 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 678
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 679 YRKSSEEAV 687
>gi|345484475|ref|XP_003425048.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 35-like isoform 2
[Nasonia vitripennis]
Length = 912
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF----EGIFGGKIDKAIAFEEVLVLSSFMCKASQ 64
C L A++ + I+Q+P+ L++ LK F E K+ + + + E + L
Sbjct: 696 CAGLCDAQRSIKIVQAPSHLILTLKHFRYDSESRLRTKLSRKVIYNETIQLPVL------ 749
Query: 65 DPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS----EK 119
D E Y+L+ +VHSG+S D GHY Y DA WY NDSYV+ +T+++ +
Sbjct: 750 DQNNETYQLYAAVVHSGYSLDYGHYITYACDAKNNWYLFNDSYVAQTTIEDFKRLEPPDT 809
Query: 120 VYILFF 125
YILF+
Sbjct: 810 PYILFY 815
>gi|301604744|ref|XP_002932024.1| PREDICTED: hypothetical protein LOC100490237 [Xenopus (Silurana)
tropicalis]
Length = 863
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 47 IAFEEVLVLSSFMCKASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCN 103
I + E L L + + DP E Y L+ ++H+GFS GHYY Y+K +WY N
Sbjct: 33 IKYPEYLDLRPY----TSDPNGEPVIYVLYAVLIHTGFSCHGGHYYCYVKACNDQWYLMN 88
Query: 104 DSYVSVSTLQEVLSEKVYILFFIRANQRPVSAN 136
DS VS + ++ VL+++ Y+LF++R+ AN
Sbjct: 89 DSTVSTTDIRTVLNQQAYLLFYVRSQNSQSGAN 121
>gi|345805954|ref|XP_537816.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Canis lupus
familiaris]
Length = 915
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L L F+ K
Sbjct: 564 CKKLRNGVKYCKVLRLPEILYIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTS 623
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V S + Y+LF
Sbjct: 624 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQSAEAYVLF 682
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 683 YRKSSEEAV 691
>gi|431898903|gb|ELK07273.1| Ubiquitin carboxyl-terminal hydrolase 20 [Pteropus alecto]
Length = 889
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L L F+ K
Sbjct: 562 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTS 621
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V S + Y+LF
Sbjct: 622 QISTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTKVHETVVQSAEAYVLF 680
Query: 125 FIRANQRPVSANGTFASNGVK 145
+ ++++ V S K
Sbjct: 681 YRKSSEEAVRERQQVVSLAAK 701
>gi|449018932|dbj|BAM82334.1| ubiquitin-specific protease [Cyanidioschyzon merolae strain 10D]
Length = 660
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 68/133 (51%), Gaps = 16/133 (12%)
Query: 13 VSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQDP--- 66
+ ARK M + +P LV+ +KRF + G KID I+F E L L + P
Sbjct: 515 LKARKWMRLENAPRCLVLHMKRFTQLDVGYVTKIDDHISFPETLSLGELSETEALAPMVA 574
Query: 67 ----QPEYKLFGTIVHSGFSPDSGHYYAYIK-----DAIGRWYCCNDSYVSVSTLQEVLS 117
+ Y+L G + H+G + GHY AY++ + +W+ C+D ++ TL EVL
Sbjct: 575 ADLARVRYELCGVVEHNG-TLHFGHYVAYVRARRVATSNQQWFYCSDRHIRSCTLDEVLQ 633
Query: 118 EKVYILFFIRANQ 130
+ Y+LF+ R ++
Sbjct: 634 AQAYLLFYFRVSE 646
>gi|395506252|ref|XP_003757449.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Sarcophilus harrisii]
Length = 908
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 557 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFSLEGLDLQPFLAKECVS 616
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 617 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 675
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 676 YRKSSEEAV 684
>gi|449271599|gb|EMC81883.1| Ubiquitin carboxyl-terminal hydrolase 49 [Columba livia]
Length = 697
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 12 LVSARKQMSILQSPNILVIQLKRF---EGIFGGKIDKAIAFEEVLVLSSFMCK---ASQD 65
L A+KQ+ I + P +L + LKRF E KI + F++VL + + C+ +S D
Sbjct: 542 LSEAKKQLMIYRLPQVLRLHLKRFRWSERNHREKIGVHVLFDQVLNMEPYCCRDSLSSLD 601
Query: 66 PQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ Y L ++H G SGHY AY + G W CNDS ++V +++EV + YIL
Sbjct: 602 KETFVYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAYIL 661
Query: 124 FFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
F+ QR V + +++ K + K + T P
Sbjct: 662 FY---TQRTVQDKARISEKQLQAQVPSKHSDKDRRLTFP 697
>gi|307211464|gb|EFN87570.1| Ubiquitin carboxyl-terminal hydrolase 38 [Harpegnathos saltator]
Length = 889
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVLSSFMCKASQ 64
C KL A + ++ILQ+P L++ LK F F K+ + + +V+ L +S
Sbjct: 682 CMKLCDAHRIITILQAPAHLILSLKHFRYDFDSRLRTKLRHKVVYNDVIKLPVSTVPSS- 740
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK----V 120
Y L+ +VHSG++ D GHY+ Y D+ WY NDS+ S +T +E + K
Sbjct: 741 -ITETYNLYAAVVHSGYNMDYGHYFTYACDSKQNWYKFNDSFASCTTFEEFKNLKPPDTP 799
Query: 121 YILFF 125
YILF+
Sbjct: 800 YILFY 804
>gi|348524280|ref|XP_003449651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Oreochromis niloticus]
Length = 921
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L + F+ K S
Sbjct: 570 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDMRPFLAKESPS 629
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 630 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 688
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 689 YRKSSEEAV 697
>gi|367047331|ref|XP_003654045.1| ubiquitin carboxyl-terminal hydrolase-like protein [Thielavia
terrestris NRRL 8126]
gi|347001308|gb|AEO67709.1| ubiquitin carboxyl-terminal hydrolase-like protein [Thielavia
terrestris NRRL 8126]
Length = 520
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 19/135 (14%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFG-----GKIDKAIAFEEVLVLSSFMCKA 62
+C + AR+Q SI + PN+L IQLKRFE G KID + F L + + +A
Sbjct: 384 NCNSMQQARRQTSIKRLPNVLAIQLKRFEFKQGRNERAAKIDTPVQFPLQLNMLPYTNRA 443
Query: 63 SQDPQPE----------YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVST 111
P+ + Y L +VH G D+GHY +Y + +G +W+ ND V ++
Sbjct: 444 RSAPESKENYELARSCTYDLLSVVVHVG-EIDTGHYLSYCR--VGDQWFAFNDHKVELAQ 500
Query: 112 LQEVLSEKVYILFFI 126
+VL+ + Y+LF+I
Sbjct: 501 KSDVLNSQAYLLFYI 515
>gi|350579707|ref|XP_001929239.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Sus
scrofa]
Length = 914
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +LQ P IL I LKRF E ++ KI ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCKVLQLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETLVQNAEAYVLF 681
Query: 125 FIRANQ 130
+ ++++
Sbjct: 682 YRKSSE 687
>gi|297742807|emb|CBI35523.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C+ A+K++ +L++PNIL I LKRF+ GK++K++ F E L ++ +M + D P
Sbjct: 549 CRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNMTPYM-SGTDDRYP 607
Query: 69 EYKLFGTIVHSGF--SPDSGHYYAYIKDAIGRWY 100
Y L+ +VH + SGHY ++K+ +G W+
Sbjct: 608 VYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWF 641
>gi|327271301|ref|XP_003220426.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 49-like [Anolis carolinensis]
Length = 725
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L A+KQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 570 LSEAKKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVLFDQVLNMEPYCCRDTLSS 627
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 628 LDKETFVYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 687
Query: 122 ILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVP 162
ILF+ QR V + + +++ K K + T+P
Sbjct: 688 ILFY---TQRTVQGKASISETQLQAQVLSKHNDKDRRLTLP 725
>gi|126297738|ref|XP_001364410.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Monodelphis
domestica]
Length = 908
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 557 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLQPFLAKECVS 616
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 617 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 675
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 676 YRKSSEEAV 684
>gi|410903724|ref|XP_003965343.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Takifugu
rubripes]
Length = 937
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L + F+ K S
Sbjct: 588 CKKLRNGVKYCKVLKLPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNMQPFLAKDSPS 647
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 648 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 706
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 707 YRKSSEESV 715
>gi|348521258|ref|XP_003448143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like
[Oreochromis niloticus]
Length = 689
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 12/124 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK-ASQD 65
L A+KQ+ + + P +L + LKRF + G KI ++F+++L + + C+ A+
Sbjct: 556 LTEAQKQLMVHKLPQVLRLHLKRFR--WSGRNHREKIGVHVSFDQLLNMEPYCCRDAAGS 613
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
P+P+ Y+L ++H G SGHY AY + G W CNDS ++V ++ EV + Y
Sbjct: 614 PRPKHFLYELSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVDEVCRAQAY 673
Query: 122 ILFF 125
ILF+
Sbjct: 674 ILFY 677
>gi|291393673|ref|XP_002713400.1| PREDICTED: ubiquitin specific protease 4 [Oryctolagus cuniculus]
Length = 859
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D A+ F L +S F+C S
Sbjct: 696 NCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYWRDKLDTAVEFPVRALNMSEFVCDPSA 755
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ ++++++ Y+L
Sbjct: 756 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKAAYVL 813
Query: 124 FFIR 127
F+ R
Sbjct: 814 FYQR 817
>gi|367010412|ref|XP_003679707.1| hypothetical protein TDEL_0B03670 [Torulaspora delbrueckii]
gi|359747365|emb|CCE90496.1| hypothetical protein TDEL_0B03670 [Torulaspora delbrueckii]
Length = 463
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG---KIDKAIAFEEVLVLSSFMCKASQ 64
+C A K++SI + P++LV+QLKRFE + G K++ I + L + +
Sbjct: 335 NCNTSQDAIKRLSIYKLPSVLVLQLKRFEHLLNGNSLKLNDFIEYPPYLNMRDYCSSGDS 394
Query: 65 D---PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
D P Y+L G + H G + + GHY A K A +W+ NDS VS T +E L+E+ Y
Sbjct: 395 DVDVPDLIYELIGVVAHKG-TVNEGHYVATTKVAGRQWFKFNDSMVSSVTQEEALNEQAY 453
Query: 122 ILFF 125
+LF+
Sbjct: 454 LLFY 457
>gi|403354669|gb|EJY76897.1| hypothetical protein OXYTRI_01583 [Oxytricha trifallax]
Length = 916
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSS-FMCK--ASQ 64
SC +L A+ + + P +L++ +KRF + G K+ + F E S ++ + A +
Sbjct: 422 SCGRLSKAQTRFRMKNLPKVLIVHMKRFTHL-GTKLKTPLNFPEYFSFDSDYLLEDVAFK 480
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVS-VSTLQ-EVLS-EKV 120
+ Q +YKL+ IVH G+S GHYY+YI+ WY +D V + L+ +VLS +K
Sbjct: 481 EQQHQYKLYALIVHQGYSAHKGHYYSYIRPTNSDNWYKYDDESVKLIENLESQVLSTQKA 540
Query: 121 YILFF 125
YILF+
Sbjct: 541 YILFY 545
>gi|147904708|ref|NP_001083244.1| ubiquitin carboxyl-terminal hydrolase 16 [Xenopus laevis]
gi|82186810|sp|Q6PAW2.1|UBP16_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|37747736|gb|AAH60022.1| MGC68701 protein [Xenopus laevis]
Length = 901
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 72/152 (47%), Gaps = 36/152 (23%)
Query: 10 KKLV--SARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
KK V +A+KQM + IL + LKRF+ G KI++ I F EVL L+ F C A
Sbjct: 750 KKFVYTNAKKQMLVSNPSPILTLHLKRFQQNGFNLRKINRHIKFPEVLDLAPF-CTAKCK 808
Query: 66 PQPE------YKLFGTIVHSGFSPDSGHYYAYIK------------------------DA 95
PE Y L+G I HSG S SGHY A++K
Sbjct: 809 NVPEGESRLLYSLYGVIEHSG-SMRSGHYTAFVKLRHPNQQLCKMLFTGVIPEVSGSEPG 867
Query: 96 IGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
G WY +DS+V +L VLS + Y+LF+ R
Sbjct: 868 QGSWYHISDSHVQAVSLSRVLSSQAYLLFYER 899
>gi|363740497|ref|XP_415470.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Gallus gallus]
Length = 892
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 541 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECVS 600
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 601 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 659
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 660 YRKSSEEAV 668
>gi|426226105|ref|XP_004007194.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Ovis aries]
Length = 992
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L L F+ K
Sbjct: 551 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTS 610
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 611 QITTYDLLSVICHHGTA-GSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 669
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 670 YRKSSEEAV 678
>gi|322790600|gb|EFZ15408.1| hypothetical protein SINV_09822 [Solenopsis invicta]
Length = 881
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 8/124 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-- 66
C KL A++ ++ILQ+P L++ LK F F ++ + +V+ + S P
Sbjct: 674 CMKLCDAQRIITILQAPAHLILTLKHFRYDFDTRLRTKLR-HKVVYNETIQLPVSAIPYL 732
Query: 67 -QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK----VY 121
Y L+ +VHSG+S D GHY+ Y D+ WY NDS V+ +T ++ S K Y
Sbjct: 733 VAETYHLYAAVVHSGYSMDYGHYFTYACDSKQNWYKFNDSLVTQTTFEDFKSMKPPDTPY 792
Query: 122 ILFF 125
ILF+
Sbjct: 793 ILFY 796
>gi|184185439|gb|ACC68846.1| ubiquitin carboxyl-terminal hydrolase 49 (predicted) [Rhinolophus
ferrumequinum]
Length = 683
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 12/124 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C+ +S
Sbjct: 527 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCRDMLSS 584
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D + Y L ++H G SGHY AY + G W CNDS ++V +++EV + Y
Sbjct: 585 LDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAY 644
Query: 122 ILFF 125
ILF+
Sbjct: 645 ILFY 648
>gi|118102568|ref|XP_001231682.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Gallus gallus]
Length = 715
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 12 LVSARKQMSILQSPNILVIQLKRF---EGIFGGKIDKAIAFEEVLVLSSFMCK---ASQD 65
L A+KQ+ I + P +L + LKRF E KI + F++VL + + C+ +S D
Sbjct: 542 LSEAKKQLMIYRLPQVLRLHLKRFRWSERNHREKIGVHVLFDQVLNMEPYCCRDSLSSLD 601
Query: 66 PQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ Y L ++H G SGHY AY + G W CNDS ++V +++EV + YIL
Sbjct: 602 KETFVYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAYIL 661
Query: 124 FFIRANQRPVSANGTFASNGVKSHENGKEAYKG 156
F+ QR V + +++ G A +G
Sbjct: 662 FY---TQRTVQDKARISEKQLQAQGKGLAAGRG 691
>gi|366995313|ref|XP_003677420.1| hypothetical protein NCAS_0G01800 [Naumovozyma castellii CBS 4309]
gi|342303289|emb|CCC71067.1| hypothetical protein NCAS_0G01800 [Naumovozyma castellii CBS 4309]
Length = 875
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K+ SIL++P L++ LK RF G K+ +A+++ L ++ + S
Sbjct: 626 CHKTTNATKRSSILRAPETLLVHLKKFRFNGTTSSKMKQAVSYPMYLDMTEYCETPSGTK 685
Query: 67 Q--PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS-VSTLQEVLSEKVYIL 123
Q +Y+L +VH G S SGHY A+ + G W +D Y++ +S L + Y L
Sbjct: 686 QLPVKYELLSVVVHEGRSLSSGHYIAHCRQPDGSWATYDDEYINKISELNVLKEANAYYL 745
Query: 124 FFIRANQRPVSANGTFASN 142
+ R R + N
Sbjct: 746 LYTRLTPRSIVLKNNLPKN 764
>gi|157427794|ref|NP_001098803.1| ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
gi|281312476|sp|A7Z056.1|UBP20_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|157279133|gb|AAI53255.1| USP20 protein [Bos taurus]
gi|296482025|tpg|DAA24140.1| TPA: ubiquitin carboxyl-terminal hydrolase 20 [Bos taurus]
Length = 912
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L L F+ K
Sbjct: 561 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTS 620
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 621 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 679
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 680 YRKSSEEAV 688
>gi|290980312|ref|XP_002672876.1| ubiquitin specific protease-like protein [Naegleria gruberi]
gi|284086456|gb|EFC40132.1| ubiquitin specific protease-like protein [Naegleria gruberi]
Length = 568
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFG--------GKIDKAIAFEEVLVLSSFM 59
SCK + KQ+ + P ++ LKRFE G KID+ I+F L ++ +M
Sbjct: 436 SCKTKATITKQLKFSKLPKLVCFHLKRFEHNEGVGRKSASSSKIDEHISFPFTLNMTPYM 495
Query: 60 CKASQD------PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQ 113
++SQ EY LF + H+G GHY ++K + +WY CNDS V + +
Sbjct: 496 SRSSQTKDNNSPTTEEYSLFSVVCHTG-DMSGGHYTCFVKHDV-QWYLCNDSSVYYAMEE 553
Query: 114 EVLSEKVYILFFIR 127
+V + Y LF+++
Sbjct: 554 DVADSEAYCLFYMK 567
>gi|224073512|ref|XP_002198543.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Taeniopygia
guttata]
Length = 911
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 560 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECVS 619
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 620 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 678
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 679 YRKSSEEAV 687
>gi|326930344|ref|XP_003211307.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Meleagris
gallopavo]
Length = 906
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 555 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECVS 614
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 615 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 673
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 674 YRKSSEEAV 682
>gi|297848732|ref|XP_002892247.1| ubiquitin-specific protease 2 [Arabidopsis lyrata subsp. lyrata]
gi|297338089|gb|EFH68506.1| ubiquitin-specific protease 2 [Arabidopsis lyrata subsp. lyrata]
Length = 927
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 71/127 (55%), Gaps = 16/127 (12%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDK---AIAFEEVLVLSSFMCK--ASQDPQPE 69
A K++ I ++P +L I LKRF G++ K +AF+EV+ L +M + +DP P
Sbjct: 798 ASKRVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFQEVIDLGQYMDTRFSGEDP-PV 856
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIK---------DAIGRWYCCNDSYVSVSTLQEVLSEKV 120
Y+L G + HSG + GHY AY++ + WY +D++V +L++VL +
Sbjct: 857 YRLAGLVEHSG-TMRGGHYVAYVRGGQRVKESDSSSTVWYNVSDAHVRQVSLEKVLHSEA 915
Query: 121 YILFFIR 127
YILF+ R
Sbjct: 916 YILFYER 922
>gi|18403083|ref|NP_565753.1| ubiquitin carboxyl-terminal hydrolase 1 [Arabidopsis thaliana]
gi|62901388|sp|Q9FPT5.2|UBP1_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 1; AltName:
Full=Deubiquitinating enzyme 1; Short=AtUBP1; AltName:
Full=Ubiquitin thioesterase 1; AltName:
Full=Ubiquitin-specific-processing protease 1
gi|2914695|gb|AAC04485.1| ubiquitin-specific protease 1 (UBP1), putative [Arabidopsis thaliana]
gi|330253645|gb|AEC08739.1| ubiquitin carboxyl-terminal hydrolase 1 [Arabidopsis thaliana]
Length = 1083
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 18/130 (13%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDK---AIAFEEVLVLSSFM-CKASQDPQPEY 70
ARK++ I ++P +L I LKRF G++ K + F+E + LS +M + S++ +P Y
Sbjct: 954 ARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVY 1013
Query: 71 KLFGTIVHSGFSPDSGHYYAYIK-------DAIGR------WYCCNDSYVSVSTLQEVLS 117
+L G + H G + GHY +YI+ D+ + WY +DS V ++L+EVL
Sbjct: 1014 RLAGLVEHLG-AMSRGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEVLR 1072
Query: 118 EKVYILFFIR 127
+ YILF+ R
Sbjct: 1073 SEAYILFYER 1082
>gi|320583354|gb|EFW97569.1| ubiquitin carboxyl-terminal hydrolase putative [Ogataea
parapolymorpha DL-1]
Length = 718
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CKK +A K +I ++P L + LKRF G K+ + + E L LS + S +
Sbjct: 568 NCKKTTNAIKISTIERAPETLTVHLKRFRFNGSSSMKVKANVTYPETLDLSEYTT--SMN 625
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS-EKVYILF 124
+YKL IVH G S SGHY A+ + G W +D +++ ++ LS E Y+LF
Sbjct: 626 SPTKYKLSSVIVHQGRSVSSGHYIAHCRQPDGSWATYDDEFINKIKARDALSDESAYVLF 685
Query: 125 FIRANQRPV 133
+ R + +
Sbjct: 686 YSRLTHKSI 694
>gi|392565514|gb|EIW58691.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1086
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 77/169 (45%), Gaps = 33/169 (19%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEG--IFGGKIDKAIAFE-----------EVLV 54
SCKK A K+ + + P++LV+ LKRF + KID I F E LV
Sbjct: 916 SCKKHQQATKRFDLWKLPDVLVVHLKRFSDSRMLRDKIDTFIDFPIEGLDLTEMVGERLV 975
Query: 55 LSSFMCKASQ---------DPQPEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCND 104
S + + D +Y LFG H G S GHY AY + G+WY +D
Sbjct: 976 GSRLREQGADVEALGLEGLDEPLQYDLFGVDEHLGGS-GGGHYRAYALNHVTGKWYHFDD 1034
Query: 105 SYVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEA 153
SYV+ S + ++E Y+LF+ R RP+ G KSH +EA
Sbjct: 1035 SYVTESRPEAAVNENAYLLFYRRRTNRPL---------GGKSHAKIEEA 1074
>gi|401882010|gb|EJT46285.1| ubiquitin specific protease [Trichosporon asahii var. asahii CBS
2479]
gi|406700958|gb|EKD04117.1| ubiquitin specific protease [Trichosporon asahii var. asahii CBS
8904]
Length = 261
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 13 VSARKQMSILQSPNILVIQLKRF-EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE-- 69
V A ++++I + P +L Q+KRF G K++ + F L + ++ + PE
Sbjct: 116 VHATRKLAIKKLPPVLSFQMKRFAHGATSSKVELPVKFPSHLNMRPYVDDTENESVPESL 175
Query: 70 --YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y LF + H G D+GHY+A+++ W+ C+D V+ +TL L++K Y+LF++R
Sbjct: 176 FAYDLFAVVTHEG-KLDNGHYWAHVRSG-DEWWHCDDDKVTPTTLAGALAQKAYMLFYVR 233
Query: 128 ---ANQRPVS 134
A +P+S
Sbjct: 234 KSLAYAQPMS 243
>gi|357142012|ref|XP_003572428.1| PREDICTED: uncharacterized protein LOC100832053 [Brachypodium
distachyon]
Length = 1040
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP-QPEYKLF 73
A + + + + P +L IQLKR++ K+ ++F+E+L + FM + +D Y+L
Sbjct: 918 ATQTILLTKLPPVLTIQLKRYKDDLT-KMRGHVSFKEILDVGPFMDPSCEDKGDSRYRLV 976
Query: 74 GTIVHSGFSPDSGHYYAYIKDAIGR-------WYCCNDSYVSVSTLQEVLSEKVYILFFI 126
G I H G + GHY AY++ W C ND +S +LQEVL + Y+LF+
Sbjct: 977 GVIEHLGANLGGGHYIAYVRAGCNEQSSGASSWVCANDHNISQVSLQEVLRCEAYVLFYE 1036
Query: 127 R 127
R
Sbjct: 1037 R 1037
>gi|74142121|dbj|BAE41120.1| unnamed protein product [Mus musculus]
Length = 962
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 800 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSA 859
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 860 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 917
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 918 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 957
>gi|158285524|ref|XP_001687904.1| AGAP007521-PA [Anopheles gambiae str. PEST]
gi|157020033|gb|EDO64553.1| AGAP007521-PA [Anopheles gambiae str. PEST]
Length = 1219
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA--SQD 65
+CK+ V+A KQ S+ ++P +L +QLKRF + G KI+K + L L+ + A S
Sbjct: 406 ACKRRVAATKQFSLERAPFVLCVQLKRFS-MLGAKINKHVELRSKLDLTPYSSPAMRSNG 464
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+ Y+L + H G + GHY A G ++ +DS V + V+S YILF+
Sbjct: 465 GKLTYRLTSMVTHLGSTQHCGHYTAIGHTDAGGYHVFDDSSVRPIGIHNVMSTNAYILFY 524
>gi|164519045|ref|NP_035808.2| ubiquitin carboxyl-terminal hydrolase 4 [Mus musculus]
gi|342187118|sp|P35123.3|UBP4_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein
gi|26354498|dbj|BAC40877.1| unnamed protein product [Mus musculus]
gi|74140411|dbj|BAE42357.1| unnamed protein product [Mus musculus]
gi|74146936|dbj|BAE25450.1| unnamed protein product [Mus musculus]
gi|74199576|dbj|BAE41468.1| unnamed protein product [Mus musculus]
gi|74211684|dbj|BAE29198.1| unnamed protein product [Mus musculus]
gi|148689335|gb|EDL21282.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b [Mus
musculus]
Length = 962
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 800 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSA 859
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 860 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 917
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 918 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 957
>gi|410979290|ref|XP_003996018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Felis catus]
Length = 913
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L L F+ K
Sbjct: 562 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTS 621
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 622 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 680
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 681 YRKSSEEAV 689
>gi|296191006|ref|XP_002743440.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Callithrix
jacchus]
Length = 1058
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 706 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 765
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 766 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 824
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 825 YRKSSEEAV 833
>gi|2580459|gb|AAB82339.1| putative [Mus musculus]
Length = 962
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 800 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSA 859
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 860 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 917
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 918 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 957
>gi|2655204|gb|AAC53587.1| ubiquitin-specific protease [Mus musculus]
Length = 962
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 800 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSA 859
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 860 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 917
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 918 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 957
>gi|328699875|ref|XP_001952323.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Acyrthosiphon pisum]
Length = 765
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF----EGIFGGKIDKAIAFEEVLVLSSFMCKASQ 64
C++ V+A K+ SI ++PN+L IQLKR+ +G G K KAI E L LSS+
Sbjct: 271 CQRQVAADKKFSIERAPNVLCIQLKRYSIGMDGYSGNKNSKAIQINERLDLSSYQFDHHT 330
Query: 65 ---DPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV-LSEK 119
D +P Y L I+H G S GHY G +YC NDS V + + S
Sbjct: 331 FKIDVRPLRYHLVSMIIHYGSSLHCGHYTTLGLTPSGSYYCFNDSNVYRTNFKNYSTSND 390
Query: 120 VYILFF 125
YI+F+
Sbjct: 391 SYIIFY 396
>gi|148689334|gb|EDL21281.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a [Mus
musculus]
Length = 915
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 753 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSA 812
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 813 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 870
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 871 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 910
>gi|448530478|ref|XP_003870072.1| Dot4 protein [Candida orthopsilosis Co 90-125]
gi|380354426|emb|CCG23941.1| Dot4 protein [Candida orthopsilosis]
Length = 748
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CK A K SIL +P L I LKRF+ G K+ + I++ + L L+ +M + + P
Sbjct: 622 CKTFTQANKISSILTAPETLTIHLKRFKFNGNSSSKVKQGISYSKYLDLTKYMDQEADSP 681
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSE-KVYILF 124
+Y+L IVH G S SGHY ++ G W +D Y++ ++ LS+ Y+L
Sbjct: 682 SVKYQLIAVIVHEGRSISSGHYICHVLQPDGTSWSTYDDEYINRIDERKALSDANAYVLV 741
Query: 125 FIR 127
+ +
Sbjct: 742 YTK 744
>gi|158285526|ref|XP_001237068.2| AGAP007521-PB [Anopheles gambiae str. PEST]
gi|157020034|gb|EAU77612.2| AGAP007521-PB [Anopheles gambiae str. PEST]
Length = 1053
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA--SQD 65
+CK+ V+A KQ S+ ++P +L +QLKRF + G KI+K + L L+ + A S
Sbjct: 360 ACKRRVAATKQFSLERAPFVLCVQLKRFS-MLGAKINKHVELRSKLDLTPYSSPAMRSNG 418
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+ Y+L + H G + GHY A G ++ +DS V + V+S YILF+
Sbjct: 419 GKLTYRLTSMVTHLGSTQHCGHYTAIGHTDAGGYHVFDDSSVRPIGIHNVMSTNAYILFY 478
>gi|15030172|gb|AAH11341.1| Usp4 protein [Mus musculus]
Length = 915
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 753 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSA 812
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 813 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 870
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 871 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 910
>gi|74211276|dbj|BAE37701.1| unnamed protein product [Mus musculus]
Length = 582
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 420 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSA 479
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 480 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 537
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 538 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 577
>gi|91078882|ref|XP_972954.1| PREDICTED: similar to Ubiquitin-specific protease 36 CG5505-PA
[Tribolium castaneum]
gi|270003709|gb|EFA00157.1| hypothetical protein TcasGA2_TC002978 [Tribolium castaneum]
Length = 739
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 3/132 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
SC+K V A KQ S+ ++P +L IQLKRF + KI K I F + L L+ + P
Sbjct: 297 SCQKKVPATKQFSLERAPMVLCIQLKRF-SVSNNKITKHIHFRQRLDLTRYARHRPSVPL 355
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF-I 126
Y+L + H G + + GHY A + G +Y +DS V V + Q V + YI+ + +
Sbjct: 356 -IYRLVALVTHMGPTVNCGHYTAVAQAPSGNFYQFDDSMVRVISHQAVFNTNAYIMLYEL 414
Query: 127 RANQRPVSANGT 138
++ S NGT
Sbjct: 415 ESSPFTKSNNGT 426
>gi|332230223|ref|XP_003264287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1
[Nomascus leucogenys]
gi|332230225|ref|XP_003264288.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2
[Nomascus leucogenys]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|402896308|ref|XP_003911245.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1
[Papio anubis]
gi|402896310|ref|XP_003911246.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2
[Papio anubis]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|432884788|ref|XP_004074587.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Oryzias
latipes]
Length = 926
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L + F+ K S
Sbjct: 577 CKKLRNGIKYCKVLKLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDMRPFLAKESPS 636
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 637 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 695
Query: 125 FIRANQRPV 133
+ +++ V
Sbjct: 696 YRKSSDEAV 704
>gi|410227942|gb|JAA11190.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410227944|gb|JAA11191.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410263220|gb|JAA19576.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410263222|gb|JAA19577.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410303424|gb|JAA30312.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410303426|gb|JAA30313.1| ubiquitin specific peptidase 20 [Pan troglodytes]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|380809004|gb|AFE76377.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|380809006|gb|AFE76378.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|384942948|gb|AFI35079.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|384942950|gb|AFI35080.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|159477144|ref|XP_001696671.1| hypothetical protein CHLREDRAFT_142509 [Chlamydomonas reinhardtii]
gi|158282896|gb|EDP08648.1| predicted protein [Chlamydomonas reinhardtii]
Length = 386
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C++LV A +++ + +PN+LVI LKRF G K +K +A + L L+ M D
Sbjct: 135 CRQLVCATRRVRLEAAPNVLVIALKRFTAGGGRAAKNNKPVALKLRLDLAPHMAPEPLDD 194
Query: 67 QP-EYKLFGTIVHSGF------------------SPDSGHYYAYIKDAIGRWYCCNDSYV 107
P Y+L+ + H+G + + GHY A ++ G WYCC+D V
Sbjct: 195 GPVTYRLYAVVQHTGLVAPGAFGGAVSGSAAASGTLNMGHYVAVVRGGDGAWYCCDDDEV 254
Query: 108 SVSTLQEVLS-EKVYILFFIRANQR 131
+ +V + Y+LF+ R + R
Sbjct: 255 TQVRESDVAAITDAYLLFYERESPR 279
>gi|114627163|ref|XP_520313.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2 [Pan
troglodytes]
gi|332833113|ref|XP_003339229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Pan
troglodytes]
gi|410336889|gb|JAA37391.1| ubiquitin specific peptidase 20 [Pan troglodytes]
gi|410336891|gb|JAA37392.1| ubiquitin specific peptidase 20 [Pan troglodytes]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|383410867|gb|AFH28647.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
gi|383410869|gb|AFH28648.1| ubiquitin carboxyl-terminal hydrolase 20 [Macaca mulatta]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|397503609|ref|XP_003822413.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 1 [Pan
paniscus]
gi|397503611|ref|XP_003822414.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 isoform 2 [Pan
paniscus]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|109110028|ref|XP_001107144.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Macaca
mulatta]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|355752999|gb|EHH57045.1| hypothetical protein EGM_06605 [Macaca fascicularis]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|355570050|gb|EHH25577.1| hypothetical protein EGK_21432 [Macaca mulatta]
Length = 914
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCRVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|403298497|ref|XP_003940054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Saimiri
boliviensis boliviensis]
Length = 915
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 682 YRKSSEEAV 690
>gi|301770377|ref|XP_002920614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Ailuropoda
melanoleuca]
Length = 1000
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 837 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 896
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 897 RPY-MYDLIAVSNHYG-AMGVGHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKAAYVL 954
Query: 124 FFIR 127
F+ R
Sbjct: 955 FYQR 958
>gi|320582331|gb|EFW96548.1| Ubiquitin carboxyl-terminal hydrolase [Ogataea parapolymorpha DL-1]
Length = 1127
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CK+ A K++ I P+IL I LKRFE F KID + F E L +S ++ ++
Sbjct: 860 NCKEHRQATKKIEIWSVPDILTIHLKRFENTKSFSDKIDAVVEFPIEGLDMSKYVVDSTG 919
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ + Y LF H G GHY AY K+ + G+WY +DS VSV E + Y+L
Sbjct: 920 E-EMIYDLFAVDNHFG-GLGGGHYTAYAKNFVDGKWYYFDDSRVSVVDPTESIRGSAYLL 977
Query: 124 FFIRANQRPVSAN---GTFASNGVKSHENGKEAYKGVK 158
F+ + + P+ G ++ EN K + VK
Sbjct: 978 FYRKRSSEPLGGEFFRRMMGEIGQRNAENHKRLQESVK 1015
>gi|213409938|ref|XP_002175739.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212003786|gb|EEB09446.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 970
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CK+ A KQM + +P++L+ LKRF E F KID I F + L L++ + Q
Sbjct: 835 NCKEFRCAYKQMELWFAPDVLIFHLKRFSSERRFRDKIDVLINFPIKSLDLTNRIGSNKQ 894
Query: 65 DPQPE----YKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEK 119
+P Y LF H G S GHY AY I R+YC +DS VS +T +EV+S
Sbjct: 895 QNKPNETIVYDLFAVDNHYG-SLGGGHYTAYAINSTDQRFYCFDDSRVSPATDEEVVSPA 953
Query: 120 VYILFFIR 127
Y+LF+ R
Sbjct: 954 AYLLFYRR 961
>gi|290986388|ref|XP_002675906.1| ubiquitin carboxyl-terminal peptidase [Naegleria gruberi]
gi|284089505|gb|EFC43162.1| ubiquitin carboxyl-terminal peptidase [Naegleria gruberi]
Length = 719
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Query: 20 SILQSPNILVIQLKRF-----EGIFGGKIDKAIAFEEVLVLSSFMC---KA-SQDPQPEY 70
SI Q P +L++ L+RF EG+ KI K I F+ L + + KA S P +Y
Sbjct: 532 SIYQLPKVLLLHLRRFDFSSTEGV--QKISKRIRFDYELNIDEKVVPNVKAISGRPSLKY 589
Query: 71 KLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
+L I H G SGHY YI+ G+W +D+ V+V +LQ VL ++ YIL +++
Sbjct: 590 RLASVICHHGKDATSGHYSTYIQHGCGKWIHIDDTKVTVVSLQHVLDQQAYILTYVQ 646
>gi|392580119|gb|EIW73246.1| hypothetical protein TREMEDRAFT_22812, partial [Tremella
mesenterica DSM 1558]
Length = 323
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE---GIFGGKIDKA-----IAFEEVLVLSSFM 59
+CK+ A+K I +P +L + LKRF FG K + I F E L +++FM
Sbjct: 200 NCKRKADAKKSFRISHAPPVLTLHLKRFNVRYNSFGNKANAEKYSGFIEFGEWLDIANFM 259
Query: 60 CKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK 119
+ ++ Y+LFG H G GHY +Y++ G+WY +D +S EVL +K
Sbjct: 260 SEGTK-----YRLFGVTCHRGAELRFGHYTSYVRGPSGQWYHADDEDMSAVRQDEVLRDK 314
Query: 120 -VYILFFIR 127
Y+L +IR
Sbjct: 315 QAYLLSYIR 323
>gi|197101307|ref|NP_001126647.1| ubiquitin carboxyl-terminal hydrolase 20 [Pongo abelii]
gi|75054783|sp|Q5R5Z6.1|UBP20_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|55732232|emb|CAH92820.1| hypothetical protein [Pongo abelii]
Length = 913
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 562 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 621
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 622 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 680
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 681 YRKSSEEAV 689
>gi|74190269|dbj|BAE37232.1| unnamed protein product [Mus musculus]
Length = 199
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 37 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRSA 96
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 97 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 154
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 155 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 194
>gi|444720733|gb|ELW61509.1| Ubiquitin carboxyl-terminal hydrolase 44 [Tupaia chinensis]
Length = 734
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 16/136 (11%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKASQDP 66
L A+KQ++I P +L + LKRF + G KI + FEE+L + + + + +
Sbjct: 577 LTEAQKQLTICHLPQVLRLHLKRFR--WSGRNNREKIGVHVGFEEILNMEPYCYRETLNS 634
Query: 67 -QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +S+ T+ EV Y
Sbjct: 635 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTVDEVRKAHAY 694
Query: 122 ILFFIRANQRPVSANG 137
ILF+ QR V+ NG
Sbjct: 695 ILFY---TQR-VTENG 706
>gi|170594964|ref|XP_001902192.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158590256|gb|EDP28954.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 656
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 4/123 (3%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CK+ ++ IL++PN+L+IQ+KRF FGGKI + F L L ++ + +
Sbjct: 497 NCKRTTQIQRSSRILRAPNLLLIQIKRFNS-FGGKIGVHVNFNLRLDLEQYIHRGGESHV 555
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYILFFI 126
Y+L G + H G + + GHY A ++ GR +Y +D +L E+ + + Y+L ++
Sbjct: 556 --YELTGIVQHMGNAVEHGHYIAVVRGFDGRSYYMFDDEQRHRVSLSELHNTQAYMLLYV 613
Query: 127 RAN 129
R +
Sbjct: 614 RCD 616
>gi|281338350|gb|EFB13934.1| hypothetical protein PANDA_009352 [Ailuropoda melanoleuca]
Length = 962
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 799 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 858
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 859 RPY-MYDLIAVSNHYG-AMGVGHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKAAYVL 916
Query: 124 FFIR 127
F+ R
Sbjct: 917 FYQR 920
>gi|357142015|ref|XP_003572429.1| PREDICTED: uncharacterized protein LOC100832348 [Brachypodium
distachyon]
Length = 416
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD-PQPEYKLF 73
A + + + P +L IQLKRF G K+ ++F+E+L + F+ + D Y+L
Sbjct: 294 ATQTILLTNLPPVLTIQLKRFVGDIS-KLRGHVSFKEILNVGPFVHPSCVDKDNASYRLV 352
Query: 74 GTIVHSGFSPDSGHYYAYIKDAIGR-------WYCCNDSYVSVSTLQEVLSEKVYILFFI 126
G + H G + GHY AY++ + W C ND ++ +LQEVL + YILF+
Sbjct: 353 GVVEHLGPLLNGGHYIAYVRAGCNQQSSGSSSWVCANDHTITEVSLQEVLRCEAYILFYE 412
Query: 127 RAN 129
R +
Sbjct: 413 RMD 415
>gi|291228611|ref|XP_002734273.1| PREDICTED: ubiquitin thioesterase 49-like [Saccoglossus
kowalevskii]
Length = 667
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 15 ARKQMSILQSPNILVIQLKRFEG---IFGGKIDKAIAFEEVLVLSSFMCKASQDPQP--- 68
A KQ+ I P +L + LKRF + KI+ + F + L + F C S +P
Sbjct: 522 ASKQLLITTLPQVLRLHLKRFRWSGRMHREKINVHVDFSQRLDMKPF-CSPSLGCEPLDY 580
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
EY L ++H G SGHY AY +A G W CNDS + + ++++V S + YILF+ +
Sbjct: 581 EYDLAAVVIHHGRGFGSGHYTAYCWNAQGGFWVHCNDSRLDLCSIEDVTSCQAYILFYTQ 640
Query: 128 ANQRP 132
RP
Sbjct: 641 KKLRP 645
>gi|222623104|gb|EEE57236.1| hypothetical protein OsJ_07224 [Oryza sativa Japonica Group]
Length = 451
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C L A K+M I ++P++LVI LKRF+ + K +++ V L + S+D
Sbjct: 316 CSSLQEAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDADC 375
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL--------- 116
EY LF +VH G SP+ GHY + IK G W +D V + STLQ
Sbjct: 376 EYSLFAVVVHVGSSPNHGHYVSQIKSH-GNWLSFDDDTVQISEESTLQTFYGSSREHCGG 434
Query: 117 -SEKVYILFFIR 127
++ YILF+ R
Sbjct: 435 NTDHGYILFYER 446
>gi|42542785|gb|AAH66180.1| Usp4 protein, partial [Mus musculus]
gi|45219741|gb|AAH66865.1| Usp4 protein, partial [Mus musculus]
Length = 961
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 799 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVGALNMSEFVCDRSA 858
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 859 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 916
Query: 124 FFIRANQR--PVSANGTF--ASNGVK---SHE--NGKEAY 154
F+ R + S+ G+F + GVK SH+ +EAY
Sbjct: 917 FYQRRDDECSSTSSLGSFPGSDGGVKLSSSHQGMGDEEAY 956
>gi|348581460|ref|XP_003476495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cavia
porcellus]
Length = 932
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 769 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDPSA 828
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ G+WY +DS VS+++ +++++ Y+L
Sbjct: 829 QPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKFSGKWYYFDDSNVSLASEDQIVTKAAYVL 886
Query: 124 FFIRANQ 130
F+ R ++
Sbjct: 887 FYQRRDE 893
>gi|326436501|gb|EGD82071.1| hypothetical protein PTSG_02752 [Salpingoeca sp. ATCC 50818]
Length = 1058
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 10 KKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA----- 62
+ L A K+ I + P +L IQLKRFE G K DK ++F VL L+ F C +
Sbjct: 929 RTLQEATKRYLIEKPPEVLTIQLKRFESAGRRLQKTDKFVSFPLVLDLAPF-CTSNCAVT 987
Query: 63 --SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA---IGRWYCCNDSYVSVSTLQEVLS 117
S Y+L +VH G GHY AY+K RW+ C+D V + +EV S
Sbjct: 988 VYSDGAGIRYELMTVVVHQG-GMRGGHYIAYVKRGGVDNHRWFVCSDRSVRAVSSKEVFS 1046
Query: 118 EKVYILFFIR 127
+ Y+LF+ R
Sbjct: 1047 AQAYLLFYQR 1056
>gi|154319113|ref|XP_001558874.1| hypothetical protein BC1G_02508 [Botryotinia fuckeliana B05.10]
gi|347832887|emb|CCD48584.1| similar to U1biquitin-specific peptidase [Botryotinia fuckeliana]
Length = 688
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK + SI +P+IL +QLKRF G G K AI + L LS + +
Sbjct: 568 CKVTGDVHRVQSISHAPDILFVQLKRF-GYDGRKDKLAIPIDHTLDLSPYRDPSGSKDSM 626
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL-SEKVYILFFIR 127
EY+L ++ HSG S D GHY + GRW C ND++ + +TL + L + Y+L + R
Sbjct: 627 EYELVASVSHSG-SLDYGHYTCDARGPDGRWSCFNDAHYNATTLAKALGGNQPYMLLYQR 685
>gi|301606838|ref|XP_002933022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49-like [Xenopus
(Silurana) tropicalis]
Length = 686
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKASQDP 66
L A+KQ+ I + P +L + LKRF + G KI + F++VL + + C++ P
Sbjct: 522 LSEAKKQLMIFRLPQVLRLHLKRFR--WSGRNHREKIGVHVFFDQVLNMEPY-CRSVLPP 578
Query: 67 -QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
PE Y L ++H G SGHY AY + G W CNDS +++ +++EV + Y
Sbjct: 579 SNPEAYLYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLNMCSVEEVCRTQAY 638
Query: 122 ILFFI-RAN-QRPVSANGTFASNGV 144
ILF+ R+N Q V N T + G+
Sbjct: 639 ILFYTQRSNTQNSVHGNKTQTNAGI 663
>gi|210147497|ref|NP_001129942.1| ubiquitin carboxyl-terminal hydrolase 49 [Rattus norvegicus]
Length = 685
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 12/126 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCK---AS 63
L ARKQ+ I + P +L + LKRF + G KI + F++VL + + C +S
Sbjct: 530 LSEARKQLMIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVVFDQVLTMEPYCCGDMLSS 587
Query: 64 QDPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
D Y L ++H G SGHY AY + G W CNDS + V +++EV + Y
Sbjct: 588 LDKDTFAYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEEVCKTQAY 647
Query: 122 ILFFIR 127
ILF+ R
Sbjct: 648 ILFYTR 653
>gi|115446845|ref|NP_001047202.1| Os02g0573400 [Oryza sativa Japonica Group]
gi|46806341|dbj|BAD17530.1| putative ubiquitin-specific protease 3 (UBP3) [Oryza sativa
Japonica Group]
gi|113536733|dbj|BAF09116.1| Os02g0573400 [Oryza sativa Japonica Group]
Length = 415
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C L A K+M I ++P++LVI LKRF+ + K +++ V L + S+D
Sbjct: 280 CSSLQEAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDADC 339
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL--------- 116
EY LF +VH G SP+ GHY + IK + G W +D V + STLQ
Sbjct: 340 EYSLFAVVVHVGSSPNHGHYVSQIK-SHGNWLSFDDDTVQISEESTLQTFYGSSREHCGG 398
Query: 117 -SEKVYILFFIR 127
++ YILF+ R
Sbjct: 399 NTDHGYILFYER 410
>gi|427784441|gb|JAA57672.1| Putative ubiquitin carboxyl-terminal hydrolase [Rhipicephalus
pulchellus]
Length = 881
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 32/148 (21%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFG--GKIDKAIAFEEVLVLSSFMCKASQ 64
C L AR+ +++ + P LV+ L RF +G+ G KI +AF + L L S C
Sbjct: 653 CGTLRDARRTVALAEPPQHLVLTLMRFSYDGVTGTRAKILHEVAFPQTLALPS-NCGLGS 711
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA--------------------IGRWYCCND 104
+ QP Y L+ +VHSG S D GHYY Y + + RWY ND
Sbjct: 712 NQQPTYVLYAVVVHSGTSADRGHYYTYARYSSQESLSPRKSVYRSGTPDPLCKRWYLFND 771
Query: 105 SYVSV---STLQEVLS----EKVYILFF 125
S VS ++LQ + S + Y+LF+
Sbjct: 772 SRVSAASYASLQGLTSRFPRDTAYVLFY 799
>gi|125539986|gb|EAY86381.1| hypothetical protein OsI_07760 [Oryza sativa Indica Group]
Length = 415
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C L A K+M I ++P++LVI LKRF+ + K +++ V L + S+D
Sbjct: 280 CSSLQEAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDADC 339
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL--------- 116
EY LF +VH G SP+ GHY + IK G W +D V + STLQ
Sbjct: 340 EYSLFAVVVHVGSSPNHGHYVSQIKSH-GNWLSFDDDTVQISEESTLQTFYGSSREHCGG 398
Query: 117 -SEKVYILFFIR 127
++ YILF+ R
Sbjct: 399 NTDHGYILFYER 410
>gi|410075489|ref|XP_003955327.1| hypothetical protein KAFR_0A07580 [Kazachstania africana CBS 2517]
gi|372461909|emb|CCF56192.1| hypothetical protein KAFR_0A07580 [Kazachstania africana CBS 2517]
Length = 802
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K+ +IL++P L++ LK RF G K+ +A+++ L L+ + C +
Sbjct: 608 CHKTTNAVKRNTILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEY-CDNEGNK 666
Query: 67 Q---PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYI 122
+ +Y+L +VH G S SGHY A+ K G W +D Y++ + +EVL E Y
Sbjct: 667 KILPVKYQLISVVVHEGRSLSSGHYVAHCKQPDGLWATYDDEYINKISDKEVLRETNAYY 726
Query: 123 LFFIRANQR--------PVSANGTFASNGVKSHEN 149
L + R R P + F + H+N
Sbjct: 727 LVYSRLTPRDIKLPASLPKQKSNAFPAQNHPQHDN 761
>gi|345787398|ref|XP_533829.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Canis
lupus familiaris]
Length = 964
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|254580171|ref|XP_002496071.1| ZYRO0C09812p [Zygosaccharomyces rouxii]
gi|238938962|emb|CAR27138.1| ZYRO0C09812p [Zygosaccharomyces rouxii]
Length = 702
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 4/122 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C +A K SIL++P L++ LK RF G K+ +A+++ L L+ + + + P
Sbjct: 525 CHMTTNAIKHNSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTDYCVEGKELP 584
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
+Y+L +VH G S SGHY + K G W +D Y++ ++VL E Y L +
Sbjct: 585 L-KYQLITVVVHEGRSLSSGHYIVHCKQPEGHWATYDDEYINNINEKDVLREPNAYYLVY 643
Query: 126 IR 127
R
Sbjct: 644 TR 645
>gi|427780065|gb|JAA55484.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
Length = 917
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 70/148 (47%), Gaps = 32/148 (21%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFG--GKIDKAIAFEEVLVLSSFMCKASQ 64
C L AR+ +++ + P LV+ L RF +G+ G KI +AF + L L S C
Sbjct: 689 CGTLRDARRTVALAEPPQHLVLTLMRFSYDGVTGTRAKILHEVAFPQTLALPS-NCGLGS 747
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDA--------------------IGRWYCCND 104
+ QP Y L+ +VHSG S D GHYY Y + + RWY ND
Sbjct: 748 NQQPTYVLYAVVVHSGTSADRGHYYTYARYSSQESLSPRKSVYRSGTPDPLCKRWYLFND 807
Query: 105 SYVSV---STLQEVLS----EKVYILFF 125
S VS ++LQ + S + Y+LF+
Sbjct: 808 SRVSAASYASLQGLTSRFPRDTAYVLFY 835
>gi|351711884|gb|EHB14803.1| Ubiquitin carboxyl-terminal hydrolase 4 [Heterocephalus glaber]
Length = 964
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDPSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPY-MYDLIAVSNHYG-AMGVGHYTAYAKNRFSGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIRANQ 130
F+ R ++
Sbjct: 919 FYQRRDE 925
>gi|342187290|ref|NP_001230117.1| ubiquitin specific peptidase 4 (proto-oncogene) [Sus scrofa]
Length = 963
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|351700166|gb|EHB03085.1| Ubiquitin carboxyl-terminal hydrolase 16 [Heterocephalus glaber]
Length = 824
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 678 TNAKKQMLISLAPPVLTLHLKRFQQAGFSLRKVNKHIQFPEILDLAPFCTLKCKNVAEEN 737
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK------------------------DAIGRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 738 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANNHLSNLVLHGDIPQDFEMESTKGQWFH 796
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V + EVL+ + Y+LF+ R
Sbjct: 797 ISDTHVQAVSTTEVLNSQAYLLFYER 822
>gi|40789018|dbj|BAA76847.2| KIAA1003 protein [Homo sapiens]
Length = 917
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 566 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 625
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 626 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 684
Query: 125 FIRANQ 130
+ ++++
Sbjct: 685 YRKSSE 690
>gi|115473875|ref|NP_001060536.1| Os07g0661300 [Oryza sativa Japonica Group]
gi|113612072|dbj|BAF22450.1| Os07g0661300, partial [Oryza sativa Japonica Group]
Length = 489
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFE-GIFG-GKIDKAIAFEEVLVLSSFMCKASQDPQPE 69
LV+ARK + I I+++ LKRF G G K+ K I F LVLS + + +
Sbjct: 368 LVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQ 427
Query: 70 ---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L TI H G +P GHY A K A G+W +D V+ +L +VL ++ Y+LF+
Sbjct: 428 SRRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVLFY 486
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQD 65
C+ K SI + P ILVI LKRF + F K++ + F L LS+F A +
Sbjct: 851 CQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLTGLDLSAFA--APRV 908
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
P Y L+G HSG + SGHY AY K G W+ NDS VSV + V+S + Y+LF
Sbjct: 909 PGCTYNLYGVANHSG-TTHSGHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLF 967
Query: 125 FIRANQRPVSAN 136
+ Q+P S++
Sbjct: 968 Y---EQQPHSSH 976
>gi|443694057|gb|ELT95284.1| hypothetical protein CAPTEDRAFT_97991, partial [Capitella teleta]
Length = 841
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + +K +++ P IL I LKRF E +F KI+ ++F E L + ++ K ++
Sbjct: 482 CKKLRNGKKYSKVMRLPEILCIHLKRFRHEFMFSTKINSYVSFPLENLDMGPYLHKDCEN 541
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + GHY +Y + + +WY +D YV+ LQ+V + + Y+LF
Sbjct: 542 QVTTYDLVAVICHHG-TAGGGHYTSYALNHLSQQWYEFDDQYVTEVDLQQVENCEAYVLF 600
Query: 125 FIRAN 129
+ N
Sbjct: 601 YRSKN 605
>gi|410951165|ref|XP_003982270.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Felis
catus]
Length = 964
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|119608317|gb|EAW87911.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
gi|119608318|gb|EAW87912.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
gi|119608319|gb|EAW87913.1| ubiquitin specific peptidase 20, isoform CRA_a [Homo sapiens]
Length = 916
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 565 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 624
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 625 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 683
Query: 125 FIRANQ 130
+ ++++
Sbjct: 684 YRKSSE 689
>gi|34395185|dbj|BAC83574.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 669
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFE-GIFG-GKIDKAIAFEEVLVLSSFMCKASQDPQPE 69
LV+ARK + I I+++ LKRF G G K+ K I F LVLS + + +
Sbjct: 548 LVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQ 607
Query: 70 ---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L TI H G +P GHY A K A G+W +D V+ +L +VL ++ Y+LF+
Sbjct: 608 SRRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVLFY 666
>gi|183396780|ref|NP_001103773.2| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|183397134|ref|NP_006667.3| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|183397136|ref|NP_001008563.2| ubiquitin carboxyl-terminal hydrolase 20 [Homo sapiens]
gi|116242837|sp|Q9Y2K6.2|UBP20_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20; AltName:
Full=VHL-interacting deubiquitinating enzyme 2;
Short=hVDU2
Length = 914
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 622
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 623 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 681
Query: 125 FIRANQ 130
+ ++++
Sbjct: 682 YRKSSE 687
>gi|260949473|ref|XP_002619033.1| hypothetical protein CLUG_00192 [Clavispora lusitaniae ATCC 42720]
gi|238846605|gb|EEQ36069.1| hypothetical protein CLUG_00192 [Clavispora lusitaniae ATCC 42720]
Length = 650
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C++ A K+ ++ ++P LV+ +KRF+ G K+ + +A+ + L L+ +M S+
Sbjct: 501 CQQRTVATKKSTVAEAPQTLVVHVKRFKFNGNSSAKVKQPVAYTKYLDLTPYMTSGSE-- 558
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILFF 125
Y+L IVH G S SGHY A+ G W +D Y++ ++ L++ Y L +
Sbjct: 559 -CRYQLLAVIVHEGRSMSSGHYVAHCLQPDGTWATYDDEYINQIAERDALNDPAAYCLVY 617
Query: 126 IRANQR 131
R +R
Sbjct: 618 TRLERR 623
>gi|355728062|gb|AES09403.1| ubiquitin specific peptidase 4 [Mustela putorius furo]
Length = 684
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 522 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 581
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 582 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 639
Query: 124 FFIRAN 129
F+ R +
Sbjct: 640 FYQRRD 645
>gi|24660425|gb|AAH39593.1| Ubiquitin specific peptidase 20 [Homo sapiens]
gi|119608320|gb|EAW87914.1| ubiquitin specific peptidase 20, isoform CRA_b [Homo sapiens]
Length = 913
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 562 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 621
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 622 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 680
Query: 125 FIRANQ 130
+ ++++
Sbjct: 681 YRKSSE 686
>gi|23262727|gb|AAL79676.1| pVHL-interacting deubiquitinating enzyme 2 [Homo sapiens]
gi|168278785|dbj|BAG11272.1| ubiquitin carboxyl-terminal hydrolase 20 [synthetic construct]
Length = 913
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L F+ K
Sbjct: 562 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKINSHVSFPLEGLDLRPFLAKECTS 621
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 622 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 680
Query: 125 FIRANQ 130
+ ++++
Sbjct: 681 YRKSSE 686
>gi|407860334|gb|EKG07352.1| ubiquitin hydrolase, putative,cysteine peptidase, Clan CA, family
C19, putative [Trypanosoma cruzi]
Length = 727
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 13 VSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSF-----------MCK 61
V A K+ + + P +L+I +KRF GGK+ K I + +VL L+ F +C+
Sbjct: 327 VQATKRFQLHKLPPVLIIHMKRF-NCMGGKVTKYIQYPKVLNLAPFCTDKAMKRNATVCR 385
Query: 62 AS----QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
+ +D Y+L +H G GHYY+ ++ G W CND VS + L
Sbjct: 386 DAGGDEKDSSCLYELNAICIHEGNLLVYGHYYSVVRARNGMWLLCNDERVSYCDEERALR 445
Query: 118 EKVYILFFIRANQRPVSANGT 138
++ Y+LF+ R + A T
Sbjct: 446 QQAYMLFYSRVEPSSLGAKYT 466
>gi|156840889|ref|XP_001643822.1| hypothetical protein Kpol_1044p24 [Vanderwaltozyma polyspora DSM
70294]
gi|156114448|gb|EDO15964.1| hypothetical protein Kpol_1044p24 [Vanderwaltozyma polyspora DSM
70294]
Length = 724
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C K +A K SIL++P L++ LK RF G K+ +A+A+ L L+ + C +DP
Sbjct: 542 CHKTTNAIKCNSILRAPETLLVHLKKFRFNGQSSSKMKQAVAYPMFLDLTEY-C---EDP 597
Query: 67 QP------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-K 119
+ +Y+L +VH G S SGHY A+ + G W +D Y++ + + VL E
Sbjct: 598 EKGEKLPVKYQLISVVVHEGRSLSSGHYIAHCRQPDGSWAIYDDEYINKISERNVLKEPN 657
Query: 120 VYILFFIRANQRPV 133
Y L + R + V
Sbjct: 658 AYYLIYTRLTPKEV 671
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFEEV-LVLSSFMCKASQD 65
C+ K SI + P ILVI LKRF + F K++ + F L LS+F A +
Sbjct: 853 CQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLTGLDLSAFA--APRV 910
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
P Y L+G HSG + SGHY AY K G W+ NDS VSV + V+S + Y+LF
Sbjct: 911 PGCTYNLYGVANHSG-TTHSGHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLF 969
Query: 125 FIRANQRPVSAN 136
+ Q+P S++
Sbjct: 970 Y---EQQPHSSH 978
>gi|345787400|ref|XP_003432923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Canis
lupus familiaris]
Length = 917
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 754 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 813
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 814 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 871
Query: 124 FFIR 127
F+ R
Sbjct: 872 FYQR 875
>gi|444517773|gb|ELV11787.1| Ubiquitin carboxyl-terminal hydrolase 20 [Tupaia chinensis]
Length = 752
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L L F+ K
Sbjct: 404 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKISSHVSFPLEGLDLRPFLAKECTS 463
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 464 QITAYDLLSVICHHG-TAGSGHYVAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 522
Query: 125 FIRANQ 130
+ ++++
Sbjct: 523 YRKSSE 528
>gi|328723134|ref|XP_001946077.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Acyrthosiphon pisum]
Length = 920
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE----GIFGGKIDKAIAFEEVLVLSSFMCKASQ 64
C++ V+A K+ SI ++PN+L IQLKR+ G G K KAI E L LSS+ +
Sbjct: 315 CRRQVAADKKFSIERAPNVLCIQLKRYSVGMGGFSGNKNSKAIQINERLDLSSYQFDHHK 374
Query: 65 ---DPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV-LSEK 119
D +P Y L ++H G S SGHY G +Y NDS V + + S
Sbjct: 375 FKIDARPLRYHLVSMVIHYGSSLHSGHYTTLGLTPSGSYYYFNDSNVYQTNFKNYSTSND 434
Query: 120 VYILFF 125
YI+F+
Sbjct: 435 SYIIFY 440
>gi|395538233|ref|XP_003771089.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44 [Sarcophilus
harrisii]
Length = 717
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ + + P +L + LKRF + G KI + F+E+L + + + S +
Sbjct: 557 LTEAQKQLMVCRLPQVLRLHLKRFR--WSGRNHREKIGVHVGFDEILNMEPYCYRESLKS 614
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+PE Y L ++H G SGHY AY ++ G W CNDS +++ TL+EV + Y
Sbjct: 615 LRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLNMCTLEEVCKAQAY 674
Query: 122 ILFFI-RANQ 130
ILF+ RA Q
Sbjct: 675 ILFYTQRAPQ 684
>gi|344275820|ref|XP_003409709.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Loxodonta africana]
Length = 961
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 798 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 857
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 858 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSSVSLASEDQIVTKAAYVL 915
Query: 124 FFIR 127
F+ R
Sbjct: 916 FYQR 919
>gi|324502429|gb|ADY41070.1| Ubiquitin carboxyl-terminal hydrolase 33 [Ascaris suum]
Length = 1035
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEV-LVLSSFMCKA--S 63
C KL + K I Q P IL I LKRF + + K+ ++ F L LS F+ ++ +
Sbjct: 638 CSKLRNGVKMCKITQLPEILCIHLKRFRHDASYSSKVSTSVTFPVCDLDLSPFVTQSVRT 697
Query: 64 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYI 122
Q+ + Y L + H G + DSGHY AY ++ + WY +D+ V+ + +V+ ++ Y+
Sbjct: 698 QEKKTLYDLCAFVSHQGSTADSGHYLAYCRNEVDNNWYEFDDTIVTRLEVADVMGKEAYV 757
Query: 123 LFFIR 127
LF+ R
Sbjct: 758 LFYQR 762
>gi|393911690|gb|EFO26812.2| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 855
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 3 DLC---LFSCKKLVSAR---KQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVL 53
DLC ++SC+K R K I+ P IL I LKRF E + KI + F L
Sbjct: 460 DLCGENMYSCEKCAKLRNGVKICKIIDPPEILCIHLKRFRHELSYSVKIRNKVTFPVHDL 519
Query: 54 VLSSFMCKASQDPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVST 111
L+ F+ ++ +P Y L I H G + +SGHY AY K+ + WY +D+ V+
Sbjct: 520 DLTPFIASFEKNKEPVLYDLVAFITHYGANAESGHYVAYCKNEMDDNWYEFDDTMVTRLE 579
Query: 112 LQEVLSEKVYILFFIR 127
+ ++LS++ Y+LF+ R
Sbjct: 580 IADILSKEAYVLFYQR 595
>gi|410951167|ref|XP_003982271.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Felis
catus]
Length = 917
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 754 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 813
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 814 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 871
Query: 124 FFIR 127
F+ R
Sbjct: 872 FYQR 875
>gi|202070754|ref|NP_001128484.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Rattus
norvegicus]
gi|302595968|sp|B2GUZ1.1|UBP4_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|149018536|gb|EDL77177.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_a [Rattus norvegicus]
gi|183985839|gb|AAI66460.1| Usp4 protein [Rattus norvegicus]
Length = 961
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C +
Sbjct: 799 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRAA 858
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 859 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 916
Query: 124 FFIRANQR------PVSANGT 138
F+ R + PVS G+
Sbjct: 917 FYQRRDDECPSTSSPVSFPGS 937
>gi|299744717|ref|XP_001831228.2| ubiquitin carboxyl-terminal hydrolase 4 [Coprinopsis cinerea
okayama7#130]
gi|298406256|gb|EAU90391.2| ubiquitin carboxyl-terminal hydrolase 4 [Coprinopsis cinerea
okayama7#130]
Length = 1108
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 27/144 (18%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKA--- 62
CK A K +S+ + P IL+I LKRFE G F KID + F + L L+++M
Sbjct: 964 CKTKRRASKTLSLARLPPILLIHLKRFEANGRFSDKIDTFVEFPMKSLDLTNYMPPPLPP 1023
Query: 63 -------------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCN 103
+Q P +Y L+G H G + SGHY AYI + G W C+
Sbjct: 1024 GADKSEINGGVPMSLEDPRTQVPPYKYDLYGVTNHYG-NLSSGHYTAYIA-SRGGWMLCD 1081
Query: 104 DSYVSVSTLQEVLSEKVYILFFIR 127
DS V ++V+++K Y+LF+ R
Sbjct: 1082 DSSVKPIDPRQVVNQKAYVLFYKR 1105
>gi|159485266|ref|XP_001700667.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272099|gb|EDO97905.1| predicted protein [Chlamydomonas reinhardtii]
Length = 634
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 11 KLVSARKQMSILQSPNILVIQLKRF-----EGIFGG---KIDKAIAFEEVLVLSSFMCKA 62
+++ +K + + + P LV+ LKRF G GG K+ K +AF L L S + A
Sbjct: 504 EMLPVKKDVRLYRLPECLVLHLKRFTYSATAGGHGGGYSKLHKMVAFGNSLRLDSKVL-A 562
Query: 63 SQDP---QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSE 118
P QPEY+LF T++H G S GHY A + G W ND+ V V VL E
Sbjct: 563 DDCPDRSQPEYRLFATVIHHGRSIAGGHYTADVLQPDGVTWLRFNDAVVDVVPEAAVLGE 622
Query: 119 KVYILFFIRA 128
+ Y+LF+ R+
Sbjct: 623 RPYLLFYQRS 632
>gi|402080094|gb|EJT75239.1| hypothetical protein GGTG_05176 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 517
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKA------IAFEEVLVLSSFMCK 61
SC AR+ SI + PN+L IQLKRFE GG+ DKA + F L + + +
Sbjct: 382 SCNSTQQARRHTSIKRLPNVLSIQLKRFE-YKGGRHDKAAKVETPVQFPLSLNMFPYTNR 440
Query: 62 ASQDPQPE---------YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVST 111
E Y L G +VH G D+GHY +Y + +G +W+ ND V ++
Sbjct: 441 GRSGDSKENYELARSCTYDLLGVVVHVG-EIDTGHYTSYCR--VGDQWFVFNDHKVEMAA 497
Query: 112 LQEVLSEKVYILFFI 126
+VLS K Y+LF+I
Sbjct: 498 KSDVLSAKAYLLFYI 512
>gi|452984513|gb|EME84270.1| hypothetical protein MYCFIDRAFT_214678 [Pseudocercospora fijiensis
CIRAD86]
Length = 1694
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG--IFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CK++ A K + I P+ILV+ LKRF G F KID + + E L ++ + D
Sbjct: 1388 CKEMRQAAKTLEIWTLPDILVVHLKRFGGNRSFRDKIDLLVDYPVEGLDMNDKVGLKEGD 1447
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYV-SVSTLQEVLSEKVYIL 123
Y LF +H G GHY AY+K+ G WY CNDS V + + ++ S Y+L
Sbjct: 1448 KDYTYDLFAVDLHFGGL-GGGHYTAYVKNFFDGEWYDCNDSSVYKLGSTHKIQSAAAYLL 1506
Query: 124 FFIRANQRPV 133
F+ R + +P+
Sbjct: 1507 FYRRRSDKPL 1516
>gi|224044360|ref|XP_002189853.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Taeniopygia guttata]
Length = 815
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P IL + LKRF+ G K+++ I F EV+ L+ F CK A +
Sbjct: 670 TNAKKQMLISLAPPILTLHLKRFQQAGFNLQKVNRHIKFPEVIDLAPFCTAKCKNVAEGN 729
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK---------DAI--------------GRWYCC 102
+ Y L+G + HSG + SGHY AY+K D + G+W+
Sbjct: 730 TKVLYSLYGVVEHSG-TMRSGHYTAYVKMRAMNNHLSDLVLRGKSQASETEPVKGQWFHI 788
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V ++ +VLS + Y+LF+ R
Sbjct: 789 SDTHVQPVSVSKVLSSQAYLLFYER 813
>gi|348570388|ref|XP_003470979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cavia
porcellus]
Length = 901
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E + K+ ++F E L L F+ K
Sbjct: 548 CKKLRNGVKYCKVLRLPEILCIHLKRFRHELTYSFKVSSHVSFPLEGLDLRPFLAKECTS 607
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + Y+LF
Sbjct: 608 QVTTYDLLSIICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQHAEAYVLF 666
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 667 YRKSSEEAV 675
>gi|344275822|ref|XP_003409710.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Loxodonta africana]
Length = 914
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 751 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDLSA 810
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 811 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSSVSLASEDQIVTKAAYVL 868
Query: 124 FFIR 127
F+ R
Sbjct: 869 FYQR 872
>gi|344277148|ref|XP_003410366.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Loxodonta
africana]
Length = 827
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G KI+K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKINKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 741 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESTKGQWFH 799
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VLS + Y+LF+ R
Sbjct: 800 ISDTHVQAVPTTKVLSSQAYLLFYER 825
>gi|123983160|gb|ABM83321.1| ubiquitin specific peptidase 16 [synthetic construct]
Length = 822
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 677 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 736
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 737 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 795
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 796 SDTHVQAVPTTKVLNSQAYLLFYER 820
>gi|226755951|sp|Q4R6X7.2|UBP16_MACFA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
Length = 826
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 741 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 799
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 800 SDTHVQAVPTTKVLNSQAYLLFYER 824
>gi|392565337|gb|EIW58514.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1173
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 22/139 (15%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKA--- 62
CK L A K++S+ + P +L+I LKRF +G F KI+ + F + L L+++M
Sbjct: 1034 CKTLRKATKRLSLSRLPPVLLIHLKRFSAKGPFTDKIETTVEFPLKGLDLTNYMPPPLPP 1093
Query: 63 --------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVS 108
Q+P Y L+G H G S +GHY A+I + G W C+DS V+
Sbjct: 1094 GVSGGSPVQPDDPRYQNPPYRYDLYGVTNHFG-SLSTGHYTAFIA-SRGGWLYCDDSRVT 1151
Query: 109 VSTLQEVLSEKVYILFFIR 127
+ ++V+ + YILF+ R
Sbjct: 1152 SAEAKDVVGKPAYILFYKR 1170
>gi|148233102|ref|NP_001090641.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus (Silurana)
tropicalis]
gi|281312479|sp|A0JM59.1|UBP20_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|117557978|gb|AAI25750.1| usp20 protein [Xenopus (Silurana) tropicalis]
Length = 884
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L L F+ K
Sbjct: 533 CKKLRNGVKYCKVLRLPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKECVS 592
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G S SGHY +Y ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 593 RITTYDLLAVICHHG-SASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 651
Query: 125 FIRANQ 130
+ ++++
Sbjct: 652 YRKSSE 657
>gi|21314967|gb|AAH30777.1| Ubiquitin specific peptidase 16 [Homo sapiens]
gi|123997869|gb|ABM86536.1| ubiquitin specific peptidase 16 [synthetic construct]
Length = 822
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 677 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 736
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 737 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 795
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 796 SDTHVQAVPTTKVLNSQAYLLFYER 820
>gi|406606361|emb|CCH42352.1| putative ubiquitin carboxyl-terminal hydrolase 12 [Wickerhamomyces
ciferrii]
Length = 1327
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCK-ASQ 64
CK+ A KQ+SI +P+IL I LKRF + F KI K + F E +S ++ +
Sbjct: 1048 CKEHRQASKQISIWSTPDILTIHLKRFTSQRSFSDKISKVVNFPIEGFDVSPYISSPVNS 1107
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ + Y LF H G GHY + +K+ + +WY NDS+VS +++++++S + Y+L
Sbjct: 1108 NEETIYDLFAVDNHWG-GISGGHYTSKVKNFVDNQWYNYNDSHVSPTSVEDLISAEAYLL 1166
Query: 124 FFIR 127
F+ R
Sbjct: 1167 FYRR 1170
>gi|403291354|ref|XP_003936760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Saimiri
boliviensis boliviensis]
Length = 941
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 779 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNQSA 838
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 839 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 896
Query: 124 FFIR 127
F+ R
Sbjct: 897 FYQR 900
>gi|157824037|ref|NP_001099563.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Rattus
norvegicus]
gi|149018537|gb|EDL77178.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_b [Rattus norvegicus]
Length = 914
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C +
Sbjct: 752 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRALNMSEFVCDRAA 811
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 812 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVL 869
Query: 124 FFIRANQR------PVSANGT 138
F+ R + PVS G+
Sbjct: 870 FYQRRDDECPSTSSPVSFPGS 890
>gi|386781790|ref|NP_001247928.1| ubiquitin carboxyl-terminal hydrolase 16 [Macaca mulatta]
gi|402862546|ref|XP_003895616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Papio anubis]
gi|402862548|ref|XP_003895617.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2
[Papio anubis]
gi|380808856|gb|AFE76303.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Macaca mulatta]
gi|380808858|gb|AFE76304.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Macaca mulatta]
gi|383415221|gb|AFH30824.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Macaca mulatta]
gi|384944832|gb|AFI36021.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Macaca mulatta]
Length = 826
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 741 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 799
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 800 SDTHVQAVPTTKVLNSQAYLLFYER 824
>gi|403259080|ref|XP_003922063.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Saimiri
boliviensis boliviensis]
Length = 826
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 741 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANRHLSNLVLHGDIPQDFEMESKGQWFHI 799
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 800 SDTHVQAVPTSKVLNSQAYLLFYER 824
>gi|332229374|ref|XP_003263865.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Nomascus leucogenys]
Length = 826
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 741 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 799
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 800 SDTHVQAVPTTKVLNSQAYLLFYER 824
>gi|296231977|ref|XP_002761381.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Callithrix
jacchus]
Length = 826
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 741 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 799
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 800 SDTHVQAVPTSKVLNSQAYLLFYER 824
>gi|426392739|ref|XP_004062698.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Gorilla gorilla gorilla]
gi|426392741|ref|XP_004062699.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2
[Gorilla gorilla gorilla]
Length = 826
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 741 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 799
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 800 SDTHVQAVPTTKVLNSQAYLLFYER 824
>gi|62896921|dbj|BAD96401.1| ubiquitin specific protease 16 isoform a variant [Homo sapiens]
Length = 823
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 678 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 737
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 738 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 796
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 797 SDTHVQAVPTTKVLNSQAYLLFYER 821
>gi|5454156|ref|NP_006438.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Homo sapiens]
gi|75992941|ref|NP_001027582.1| ubiquitin carboxyl-terminal hydrolase 16 isoform a [Homo sapiens]
gi|6686071|sp|Q9Y5T5.1|UBP16_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName: Full=Ubiquitin-processing
protease UBP-M; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|4454565|gb|AAD20949.1| ubiquitin processing protease [Homo sapiens]
gi|7717310|emb|CAB90432.1| human ubiquitin processing protease, EC 3.1.2.15 [Homo sapiens]
gi|119630332|gb|EAX09927.1| ubiquitin specific peptidase 16, isoform CRA_a [Homo sapiens]
gi|119630334|gb|EAX09929.1| ubiquitin specific peptidase 16, isoform CRA_a [Homo sapiens]
Length = 823
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 678 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 737
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 738 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 796
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 797 SDTHVQAVPTTKVLNSQAYLLFYER 821
>gi|114683766|ref|XP_001159952.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 3 [Pan
troglodytes]
gi|114683768|ref|XP_001160171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 7 [Pan
troglodytes]
gi|397484120|ref|XP_003813229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1 [Pan
paniscus]
gi|397484122|ref|XP_003813230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2 [Pan
paniscus]
gi|410210956|gb|JAA02697.1| ubiquitin specific peptidase 16 [Pan troglodytes]
gi|410260302|gb|JAA18117.1| ubiquitin specific peptidase 16 [Pan troglodytes]
gi|410304130|gb|JAA30665.1| ubiquitin specific peptidase 16 [Pan troglodytes]
gi|410350395|gb|JAA41801.1| ubiquitin specific peptidase 16 [Pan troglodytes]
Length = 826
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 741 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 799
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 800 SDTHVQAVPTTKVLNSQAYLLFYER 824
>gi|194221320|ref|XP_001498012.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Equus
caballus]
Length = 963
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 800 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDLSA 859
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ ++++++ Y+L
Sbjct: 860 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKAAYVL 917
Query: 124 FFIR 127
F+ R
Sbjct: 918 FYQR 921
>gi|62897327|dbj|BAD96604.1| ubiquitin specific protease 16 isoform a variant [Homo sapiens]
Length = 823
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 678 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 737
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 738 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 796
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 797 SDTHVQAVPTTKVLNSQAYLLFYER 821
>gi|349604082|gb|AEP99732.1| Ubiquitin carboxyl-terminal hydrolase 4-like protein, partial
[Equus caballus]
Length = 431
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 268 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDLSA 327
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ ++++++ Y+L
Sbjct: 328 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKAAYVL 385
Query: 124 FFIRAN 129
F+ R +
Sbjct: 386 FYQRRD 391
>gi|145345991|ref|XP_001417481.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577708|gb|ABO95774.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 344
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFG----GKIDKAIAFEEVLVLSSFMCKASQ 64
C L A+K+M I ++P +L + LKRF+ I K++ + F L + + + +A +
Sbjct: 208 CGGLHEAQKRMLIHEAPKVLSLHLKRFKYIEALGRHAKLNHRVVFPSELKIPNLIDEA-E 266
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL----- 116
+P YKLF +VH G P+ GHY + K+ RW+ +D V V LQ+V
Sbjct: 267 NPDASYKLFAVVVHIGSGPNHGHYVCFAKNN-HRWFLYDDDCVEVVDEEQLQQVFGSTTD 325
Query: 117 -----SEKVYILFFIRA 128
SE YILF+ R+
Sbjct: 326 GGSAGSEHGYILFYARS 342
>gi|50312664|ref|NP_001001992.1| ubiquitin carboxyl-terminal hydrolase 16 isoform b [Homo sapiens]
gi|119630333|gb|EAX09928.1| ubiquitin specific peptidase 16, isoform CRA_b [Homo sapiens]
Length = 822
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 677 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 736
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 737 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 795
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 796 SDTHVQAVPTTKVLNSQAYLLFYER 820
>gi|355747429|gb|EHH51926.1| Ubiquitin carboxyl-terminal hydrolase 16 [Macaca fascicularis]
Length = 775
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 630 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 689
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 690 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 748
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 749 SDTHVQAVPTTKVLNSQAYLLFYER 773
>gi|354476435|ref|XP_003500430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cricetulus
griseus]
Length = 967
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 804 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDRSA 863
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 864 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 921
Query: 124 FFIR 127
F+ R
Sbjct: 922 FYQR 925
>gi|118403609|ref|NP_001072158.1| ubiquitin carboxyl-terminal hydrolase 16 [Xenopus (Silurana)
tropicalis]
gi|123911986|sp|Q0VA64.1|UBP16_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|111308974|gb|AAI21231.1| ubiquitin specific peptidase 16 [Xenopus (Silurana) tropicalis]
Length = 864
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 71/151 (47%), Gaps = 34/151 (22%)
Query: 10 KKLV--SARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSF-MCKASQ 64
KK V +A+KQM + IL + LKRF+ G KI++ I F EVL L+ F K
Sbjct: 713 KKFVYTNAKKQMLVSDPSPILTLHLKRFQQNGFNLRKINRHIKFPEVLDLAPFCTSKCKN 772
Query: 65 DPQPE----YKLFGTIVHSGFSPDSGHYYAYIK------------------------DAI 96
P E Y L+G I HSG S SGHY A++K
Sbjct: 773 IPAGESRLLYSLYGVIEHSG-SMRSGHYTAFVKLRRPNQQLCEMVLKGVIPEVSGSEPGQ 831
Query: 97 GRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
G WY +DS+V +L VLS + Y+LF+ R
Sbjct: 832 GSWYHISDSHVQAVSLSRVLSSQAYLLFYER 862
>gi|358338895|dbj|GAA29115.2| ubiquitin carboxyl-terminal hydrolase 44/49, partial [Clonorchis
sinensis]
Length = 841
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 78/180 (43%), Gaps = 30/180 (16%)
Query: 10 KKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKA---IAFEEVLVLSSFM------- 59
+ L A + + + + P +L + +KRF I G + +K ++F +L LS FM
Sbjct: 571 QYLTRATQTIRLTRLPRVLRLHVKRFRWI-GRQREKVGCHVSFPLILDLSDFMLNDADRL 629
Query: 60 -CKASQDPQPE----YKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQ 113
C + P P Y L G IVH G SGHY AY + D W CND+ VS+
Sbjct: 630 ECPSPAKPNPPRQHLYHLTGVIVHHGRGFQSGHYTAYCLNDEPECWLSCNDANVSLCDYS 689
Query: 114 EVLSEKVYILFF-------------IRANQRPVSANGTFASNGVKSHENGKEAYKGVKGT 160
EV + + Y+LF+ R+N + S S EN K A V GT
Sbjct: 690 EVAAAQAYLLFYSELMPASPYPNWLTRSNVSRMPFLKRCYSTAFPSEENTKPAPIEVTGT 749
>gi|353227325|emb|CCA77835.1| related to ubiquitin carboxyl-terminal hydrolase
EC=3.1.2.15-Coprinopsis cinerea [Piriformospora indica
DSM 11827]
Length = 878
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 73/163 (44%), Gaps = 41/163 (25%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFE-------GIFGG--KIDKAIAFEEVLVLSSFMC-- 60
L A K+ I P +LVI LKRF+ +FG KID IAF E L L F+
Sbjct: 701 LRKAYKRYLIAVPPPVLVIHLKRFQQVTRMPVALFGSLKKIDDFIAFPEYLDLKPFIAPR 760
Query: 61 --------------KASQDPQPEYKLFGTIVHSGFSPDSGHYYAY--------IKDAIG- 97
K + + Q Y+L +VH G + GHY AY I A G
Sbjct: 761 REDFGLRPSKIKDNKGAYEDQVMYRLSAVVVHIG-NMLGGHYVAYTALPPATPIDSASGE 819
Query: 98 ------RWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVS 134
RW +D V V+TL+EVLS K Y+ F+ R ++ P S
Sbjct: 820 APSNERRWSFQSDQIVRVATLEEVLSAKAYLCFYERVSEVPAS 862
>gi|71030536|ref|XP_764910.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351866|gb|EAN32627.1| hypothetical protein TP02_0344 [Theileria parva]
Length = 671
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFEEVLVLSSFMCKASQD 65
+CK +A K +SI ++P IL I LKRF G K KAI F ++L +S K+S+D
Sbjct: 284 NCKGYQNANKSLSIYKAPRILNINLKRFNLYSNGYKKSLKAIEFPQLLSIS---LKSSED 340
Query: 66 PQP--EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEK--VY 121
Y L+ + H G S GHY +IK G WY +DS + + VLS VY
Sbjct: 341 SYTWLNYDLYAIVCHIGKSLHMGHYITFIKGKHGFWYRFDDSIIQCVSESTVLSHNNDVY 400
Query: 122 ILFFIRANQ 130
+LF+ N+
Sbjct: 401 LLFYSINNE 409
>gi|47229640|emb|CAG06836.1| unnamed protein product [Tetraodon nigroviridis]
Length = 679
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFG----GKIDKAIAFEEVLVLSSFMCKASQDPQ 67
L A KQ+ I + P +L + LKRF G KI +AF++VL + + C S
Sbjct: 554 LSEACKQLLIYRLPQVLRLHLKRFRQWSGRNHREKIGVHVAFDQVLNIKPYCCTGSGHSV 613
Query: 68 PE----YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYI 122
Y L ++H G SGHY AY + G W CNDS + V +++EV + + YI
Sbjct: 614 HRGGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMKVCSVEEVCNTQAYI 673
Query: 123 LFF 125
LF+
Sbjct: 674 LFY 676
>gi|344252839|gb|EGW08943.1| Ubiquitin carboxyl-terminal hydrolase 4 [Cricetulus griseus]
Length = 940
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 777 TCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDRSA 836
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 837 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 894
Query: 124 FFIR 127
F+ R
Sbjct: 895 FYQR 898
>gi|195431411|ref|XP_002063735.1| GK15746 [Drosophila willistoni]
gi|194159820|gb|EDW74721.1| GK15746 [Drosophila willistoni]
Length = 840
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSF--------MC 60
CKKL A +++ I+Q+P L++ LK+F K D+ F L+ F +C
Sbjct: 607 CKKLCDAERRIGIIQAPRNLILTLKQF------KYDQKYHFRTKLMHKVFHDESVTVKLC 660
Query: 61 KAS---QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
+ Y L+ +VH+G+S DSGHY+ + D WY NDS V+ S +E+ S
Sbjct: 661 STDSLLEMSNVHYDLYAGVVHAGYSMDSGHYFTFAADQSKHWYKFNDSLVTSSQPEEMHS 720
Query: 118 ----EKVYILFF 125
YILF+
Sbjct: 721 LTSPNTPYILFY 732
>gi|5002571|emb|CAB44337.1| LSFR3 protein [Takifugu rubripes]
Length = 390
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL I LKRF E ++ KI ++F E L + F+ K S
Sbjct: 41 CKKLRNGVKYCKVLKLPEILCIHLKRFRHEVMYSFKIGSHVSFPLEGLNMQPFLAKDSPS 100
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 101 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 159
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 160 YRKSSEESV 168
>gi|242040109|ref|XP_002467449.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
gi|241921303|gb|EER94447.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
Length = 306
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 1 MKDLCLFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC 60
+KD CK VS K I Q+P +LVI LKRF KI + + L ++SFM
Sbjct: 168 IKDFMCDGCKSRVSMEKHFKIEQAPEVLVIHLKRFTNS-ESKIWDKVKYPLELDINSFM- 225
Query: 61 KASQDPQPEYK--LFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE 118
+S D +K L+G + H G + SGHY YI+ + WY ND V ++ L
Sbjct: 226 SSSDDVSCSFKYDLYGVVEHLG-AYGSGHYVCYIRSSEADWYKFNDDKVYQCSVDSALEN 284
Query: 119 KVYILFFIRANQRP 132
Y+LF+++ P
Sbjct: 285 AAYLLFYVKQGSSP 298
>gi|296225191|ref|XP_002758385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Callithrix jacchus]
Length = 963
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNQSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|194376846|dbj|BAG57569.1| unnamed protein product [Homo sapiens]
Length = 808
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 663 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 722
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 723 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 781
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 782 SDTHVQAVPTTKVLNSQAYLLFYER 806
>gi|194379266|dbj|BAG63599.1| unnamed protein product [Homo sapiens]
Length = 513
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 368 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 427
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 428 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 486
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 487 SDTHVQAVPTTKVLNSQAYLLFYER 511
>gi|67969921|dbj|BAE01308.1| unnamed protein product [Macaca fascicularis]
Length = 516
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 371 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 430
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 431 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHI 489
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 490 SDTHVQAVPTTKVLNSQAYLLFYER 514
>gi|338714892|ref|XP_003363165.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Equus caballus]
Length = 916
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 753 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDLSA 812
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ ++++++ Y+L
Sbjct: 813 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKAAYVL 870
Query: 124 FFIR 127
F+ R
Sbjct: 871 FYQR 874
>gi|297285790|ref|XP_002802844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Macaca
mulatta]
Length = 935
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 773 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSA 832
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 833 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 890
Query: 124 FFIR 127
F+ R
Sbjct: 891 FYQR 894
>gi|308505570|ref|XP_003114968.1| CRE-USP-3 protein [Caenorhabditis remanei]
gi|308259150|gb|EFP03103.1| CRE-USP-3 protein [Caenorhabditis remanei]
Length = 547
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEV-LVLSSFMCKASQDPQ 67
CK + KQM I + P++L + +KRF GGKID I F L + F+ + S +P
Sbjct: 425 CKSKQTCSKQMFIKKLPDVLCLHIKRFRDN-GGKIDTLIEFPMAGLSVDDFLTEDSDEPP 483
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L IVH G+ SGHY A+ + +WY +D+ V V +K Y+L + +
Sbjct: 484 CVYDLQSIIVHIGYGCSSGHYIAFGRRG-QKWYQFDDTVVKPVDTSLVSKQKAYVLMYTK 542
Query: 128 ANQRP 132
+ ++P
Sbjct: 543 STRKP 547
>gi|193785740|dbj|BAG51175.1| unnamed protein product [Homo sapiens]
Length = 644
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 31/144 (21%)
Query: 14 SARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQDP 66
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 500 NAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENT 559
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCCN 103
+ Y L+G + HSG + SGHY AY K ++ G+W+ +
Sbjct: 560 RVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHIS 618
Query: 104 DSYVSVSTLQEVLSEKVYILFFIR 127
D++V +VL+ + Y+LF+ R
Sbjct: 619 DTHVQAVPTTKVLNSQAYLLFYER 642
>gi|11640586|gb|AAG39290.1|AF113219_1 MSTP039 [Homo sapiens]
Length = 644
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 31/144 (21%)
Query: 14 SARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQDP 66
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 500 NAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENT 559
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCCN 103
+ Y L+G + HSG + SGHY AY K ++ G+W+ +
Sbjct: 560 RVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHIS 618
Query: 104 DSYVSVSTLQEVLSEKVYILFFIR 127
D++V +VL+ + Y+LF+ R
Sbjct: 619 DTHVQAVPTTKVLNSQAYLLFYER 642
>gi|50548343|ref|XP_501641.1| YALI0C09438p [Yarrowia lipolytica]
gi|49647508|emb|CAG81946.1| YALI0C09438p [Yarrowia lipolytica CLIB122]
Length = 526
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+CK S K +++ + P +L QLKRF+ G KID + F L +S + C SQ+
Sbjct: 405 NCKSHESVSKTLALKKPPVVLSFQLKRFQHTGSSSSKIDTHVEFPLYLDMSPYTC--SQE 462
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L+ + H G S ++GHY +K WY +D ++ +Q+VL+ + Y+LF+
Sbjct: 463 SGLVYELYAVVCHHG-SLNTGHYTCMVKGRDMHWYNFDDVTITRVDVQQVLAARAYLLFY 521
Query: 126 I 126
I
Sbjct: 522 I 522
>gi|219110875|ref|XP_002177189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411724|gb|EEC51652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1003
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 67/142 (47%), Gaps = 30/142 (21%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG------------------KIDKAIAFE 50
CKK V A KQ+++ + P L IQLKRF + G KI K+I F
Sbjct: 458 CKKYVCATKQLTVFRPPLSLCIQLKRF--TYSGRLKFSVGFGSFGNGGGGQKISKSIEFP 515
Query: 51 EVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG----RWYCCNDSY 106
L L S Y L G ++H G S SGHY AY++ G +W+ +DS+
Sbjct: 516 AQLKLP-----LSDGRSCGYSLTGIVIHVGGSASSGHYTAYVRKPGGGSKSQWFHMDDSF 570
Query: 107 VSVSTLQEVLSEK-VYILFFIR 127
V + Q VL ++ Y+LF+ R
Sbjct: 571 VEAVSEQTVLRQRDAYLLFYCR 592
>gi|209954606|ref|NP_001093971.1| ubiquitin carboxyl-terminal hydrolase 16 [Rattus norvegicus]
Length = 825
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM + +P +L + LKRF+ G K++K I F E+L L+ F CK A +
Sbjct: 679 TNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEES 738
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K+ G+W+
Sbjct: 739 TRVLYSLYGVVEHSG-TMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFH 797
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V + +VL+ + Y+LF+ R
Sbjct: 798 ISDTHVQAVPITKVLNSQAYLLFYER 823
>gi|62898145|dbj|BAD97012.1| ubiquitin specific protease, proto-oncogene isoform a variant [Homo
sapiens]
Length = 963
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|312068520|ref|XP_003137252.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 783
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 3 DLC---LFSCKKLVSAR---KQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVL 53
DLC ++SC+K R K I+ P IL I LKRF E + KI + F L
Sbjct: 347 DLCGENMYSCEKCAKLRNGVKICKIIDPPEILCIHLKRFRHELSYSVKIRNKVTFPVHDL 406
Query: 54 VLSSFMCKASQDPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVST 111
L+ F+ ++ +P Y L I H G + +SGHY AY K+ + WY +D+ V+
Sbjct: 407 DLTPFIASFEKNKEPVLYDLVAFITHYGANAESGHYVAYCKNEMDDNWYEFDDTMVTRLE 466
Query: 112 LQEVLSEKVYILFFIR 127
+ ++LS++ Y+LF+ R
Sbjct: 467 IADILSKEAYVLFYQR 482
>gi|226753950|sp|Q2KJ09.2|UBP16_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|149059758|gb|EDM10641.1| ubiquitin specific peptidase 16 [Rattus norvegicus]
Length = 826
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM + +P +L + LKRF+ G K++K I F E+L L+ F CK A +
Sbjct: 680 TNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEES 739
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K+ G+W+
Sbjct: 740 TRVLYSLYGVVEHSG-TMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFH 798
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V + +VL+ + Y+LF+ R
Sbjct: 799 ISDTHVQAVPITKVLNSQAYLLFYER 824
>gi|431913420|gb|ELK15095.1| Ubiquitin carboxyl-terminal hydrolase 4 [Pteropus alecto]
Length = 964
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYSRYWRDKLDTVVEFPVRGLNMSEFVCDLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|40795665|ref|NP_003354.2| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Homo sapiens]
gi|116242839|sp|Q13107.3|UBP4_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein homolog
gi|2656141|gb|AAC27355.1| UnpEL [Homo sapiens]
gi|115527981|gb|AAI25131.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
gi|119585375|gb|EAW64971.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|119585376|gb|EAW64972.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|158257022|dbj|BAF84484.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|2459395|gb|AAB72237.1| ubiquitin protease [Homo sapiens]
Length = 963
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|395844586|ref|XP_003795039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Otolemur
garnettii]
Length = 924
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P IL + LKRF E + KI ++F E L L F+ K
Sbjct: 573 CKKLRNGVKYCKVLRLPEILCVHLKRFRHEVTYSFKISSHVSFPLEGLDLRPFLAKECTS 632
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 633 QITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEGYVLF 691
Query: 125 FIRANQRPV 133
+ ++++ V
Sbjct: 692 YRKSSEEAV 700
>gi|403271836|ref|XP_003927810.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Saimiri
boliviensis boliviensis]
Length = 619
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 31/145 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 474 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 533
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCC 102
+ Y L+G + HSG + SGHY AY K ++ G+W+
Sbjct: 534 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANRHLSNLVLHGDIPQDFEMESKGQWFHI 592
Query: 103 NDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 593 SDTHVQAVPTSKVLNSQAYLLFYER 617
>gi|343961659|dbj|BAK62419.1| ubiquitin carboxyl-terminal hydrolase 4 [Pan troglodytes]
Length = 907
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 745 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 804
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 805 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 862
Query: 124 FFIR 127
F+ R
Sbjct: 863 FYQR 866
>gi|336272902|ref|XP_003351206.1| hypothetical protein SMAC_03509 [Sordaria macrospora k-hell]
Length = 403
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 21/142 (14%)
Query: 3 DLCLFSCKKLVS---ARKQMSILQSPNILVIQLKRFEGIFG-----GKIDKAIAFEEVLV 54
D C + C+ S AR+Q SI + PN+L IQLKRFE G KI+ + F L
Sbjct: 260 DKCEYRCQNCNSVQQARRQTSIKKLPNVLSIQLKRFEFKQGRNDRAQKIETPVQFPLQLN 319
Query: 55 LSSFMCKA-SQDPQPEYK--------LFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCND 104
+ + +A +QD + +Y+ L +VH G D+GHY +Y + +G +W+ ND
Sbjct: 320 MLPYTTRARTQDLKQDYELQRSCTYDLLCVVVHVG-DMDTGHYISYCR--VGEQWFAFND 376
Query: 105 SYVSVSTLQEVLSEKVYILFFI 126
V ++ +VL+ K Y+LF+I
Sbjct: 377 HKVELAQKSDVLNAKAYLLFYI 398
>gi|195402423|ref|XP_002059805.1| GJ15045 [Drosophila virilis]
gi|194140671|gb|EDW57142.1| GJ15045 [Drosophila virilis]
Length = 864
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 9/126 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG----IFGGKIDKAIAFEEVLVLSSFMCKASQ 64
CKKL A ++++I Q+P L++ LK+F+ F K+ + +E +++ + Q
Sbjct: 632 CKKLCDAERRIAITQAPRNLILTLKQFKYDQKYHFRTKLMHKVFHDESVIVKVCANDSLQ 691
Query: 65 DP-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS----EK 119
+ Y L+ +VH+G+S DSGHY+ + D W+ NDS V+ S QE+ S
Sbjct: 692 ETCTVHYDLYAGVVHAGYSMDSGHYFTFAADQSKNWFKFNDSLVTNSKPQEMHSLTSPNT 751
Query: 120 VYILFF 125
YILF+
Sbjct: 752 PYILFY 757
>gi|115529049|gb|AAI25132.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
Length = 963
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|440797226|gb|ELR18321.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 926
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CK L ++K + I Q P +L I +KRF + FGGK+ + F L +S F + +
Sbjct: 386 CKTLNDSQKFLRIAQPPELLCIHIKRFRHDSYFGGKLSDVVQFPLRDLDISRFCEQDADA 445
Query: 66 PQ--PEYKLFGTIVHSGFSPDSGHYYAY-IKDAIGRWYCCNDSYVSVSTLQEVLSEKVYI 122
PQ +Y L + H G GHY AY + D G+WY +DS+ + + V +++ Y+
Sbjct: 446 PQVSMKYDLVSVVNHIG-GISGGHYIAYALNDEDGKWYEFDDSWATAVSEDTVRNKEAYV 504
Query: 123 LFFIR 127
LF++R
Sbjct: 505 LFYLR 509
>gi|355746701|gb|EHH51315.1| hypothetical protein EGM_10667, partial [Macaca fascicularis]
Length = 889
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 727 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSA 786
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 787 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 844
Query: 124 FFIR 127
F+ R
Sbjct: 845 FYQR 848
>gi|410036953|ref|XP_003950154.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Pan
troglodytes]
Length = 907
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 745 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 804
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 805 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 862
Query: 124 FFIR 127
F+ R
Sbjct: 863 FYQR 866
>gi|332215938|ref|XP_003257098.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Nomascus leucogenys]
Length = 963
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|395516315|ref|XP_003762336.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 4 [Sarcophilus harrisii]
Length = 989
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C +
Sbjct: 826 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAA 885
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 886 GPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 943
Query: 124 FFIRAN 129
F+ R +
Sbjct: 944 FYQRRD 949
>gi|42407641|dbj|BAD08755.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 817
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 25 PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD-PQPEYKLFGTIVHSGFSP 83
P +LVIQLKR G K+ + ++F+E+L + F+ +S+D Y+L G + H G S
Sbjct: 706 PPVLVIQLKRNTGPI--KVRRHVSFKEILDVGLFLHPSSEDKDNSSYRLVGVVEHLGHSM 763
Query: 84 DSGHYYAYIK-------DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
SGHY AY++ + W+ +D+ + +L+EVL + YILF+ R
Sbjct: 764 YSGHYVAYVRPSPPQQTNGSSSWFWASDTDIREVSLEEVLKCEAYILFYER 814
>gi|355559641|gb|EHH16369.1| hypothetical protein EGK_11640 [Macaca mulatta]
gi|380788769|gb|AFE66260.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|383409701|gb|AFH28064.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|384942170|gb|AFI34690.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
Length = 963
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|345806341|ref|XP_003435418.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Canis lupus familiaris]
Length = 597
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K ++ +L++ LKRF G K+ K + + E L + + + P
Sbjct: 258 CLEKVPASKVLTWHSCAKVLILVLKRFSDFTGNKMTKEMQYPECLDMQHSLSERRAGPL- 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G+S SG Y+ ++K G+W+ +D+ +S + L + Y+LF+++
Sbjct: 317 VYVLYAVLVHAGWSCHSGRYFCFVKAGNGQWHKMDDAKISACVVTCALRQLAYVLFYMQ 375
>gi|251823802|ref|NP_077220.2| ubiquitin carboxyl-terminal hydrolase 16 [Mus musculus]
gi|148665920|gb|EDK98336.1| ubiquitin specific peptidase 16 [Mus musculus]
Length = 825
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM + +P +L + LKRF+ G K++K I F E+L L+ F CK A +
Sbjct: 679 TNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEES 738
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K+ G+W+
Sbjct: 739 TRVLYSLYGVVEHSG-TMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFH 797
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V + +VL+ + Y+LF+ R
Sbjct: 798 ISDTHVQAVPITKVLNSQAYLLFYER 823
>gi|114586836|ref|XP_001163445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 8 [Pan
troglodytes]
gi|397495141|ref|XP_003818419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Pan
paniscus]
gi|410227908|gb|JAA11173.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259864|gb|JAA17898.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289716|gb|JAA23458.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353791|gb|JAA43499.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 962
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 800 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 859
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 860 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 917
Query: 124 FFIR 127
F+ R
Sbjct: 918 FYQR 921
>gi|402860133|ref|XP_003894489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Papio anubis]
Length = 921
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 759 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSA 818
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 819 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 876
Query: 124 FFIR 127
F+ R
Sbjct: 877 FYQR 880
>gi|81880227|sp|Q99LG0.1|UBP16_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; AltName: Full=Ubiquitin
thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|13096967|gb|AAH03278.1| Ubiquitin specific peptidase 16 [Mus musculus]
gi|74213541|dbj|BAE35580.1| unnamed protein product [Mus musculus]
Length = 825
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM + +P +L + LKRF+ G K++K I F E+L L+ F CK A +
Sbjct: 679 TNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEES 738
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K+ G+W+
Sbjct: 739 TRVLYSLYGVVEHSG-TMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFH 797
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V + +VL+ + Y+LF+ R
Sbjct: 798 ISDTHVQAVPITKVLNSQAYLLFYER 823
>gi|403357200|gb|EJY78221.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 473
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CKAS 63
CKK + + QM+I + P ILV+ LKRF+ + K++ I +++ +S F +A
Sbjct: 339 CKKEDNFKNQMTISRFPKILVLHLKRFQYNMSWKQKLNTKIDIPKIIDMSPFAPYSNEAY 398
Query: 64 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV-SVSTLQEVLSEKVYI 122
+ Y +FG H G S SGHY A IK GRW+ CNDS V ++T SE Y+
Sbjct: 399 SSRKNVYSIFGICHHFG-SLSSGHYTAEIKTPNGRWFNCNDSIVEQIATPNFDASESAYL 457
Query: 123 LFF 125
LF+
Sbjct: 458 LFY 460
>gi|71022651|ref|XP_761555.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
gi|46101424|gb|EAK86657.1| hypothetical protein UM05408.1 [Ustilago maydis 521]
Length = 1198
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 21/138 (15%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKR--FEGIFGGKIDKAIAF--EEVLVLSSFMCKA-- 62
CK+ A K++SI + P +L+I LKR F+G F KID + F L L+++M
Sbjct: 1062 CKRPRKATKRLSISRLPRVLLIHLKRFSFKGPFTDKIDTTVTFPVNTALDLTNYMPPPLP 1121
Query: 63 -------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV 109
SQ P Y L+ H G S ++GHY A +K A WY C+DS ++
Sbjct: 1122 PGAAAAAGVKESLSQQPPYLYDLYAATHHFG-SLNTGHYTATVKSANDWWY-CDDSRITK 1179
Query: 110 STLQEVLSEKVYILFFIR 127
+ Y+L+F R
Sbjct: 1180 GDTSHLADNSAYVLWFRR 1197
>gi|119585372|gb|EAW64968.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a
[Homo sapiens]
Length = 819
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 657 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 716
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 717 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 774
Query: 124 FFIR 127
F+ R
Sbjct: 775 FYQR 778
>gi|62897009|dbj|BAD96445.1| ubiquitin specific protease, proto-oncogene isoform b variant [Homo
sapiens]
Length = 916
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 754 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 813
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 814 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 871
Query: 124 FFIR 127
F+ R
Sbjct: 872 FYQR 875
>gi|391346587|ref|XP_003747554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Metaseiulus occidentalis]
Length = 332
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKK K +SI + P ILV+ LKRF + K++ + F L +S+FM
Sbjct: 203 CKKRQRMTKNLSIWKCPKILVLHLKRFGNSERYRSKLETNVQFPLRNLDISAFMSNGGDS 262
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYILF 124
+Y L G HSG S SGHY A + I R WY CND+ VS V+S + Y+LF
Sbjct: 263 HFCKYNLIGVSNHSG-STHSGHYTATCLNPINRQWYSCNDARVSEVGESRVVSSEAYVLF 321
Query: 125 F 125
+
Sbjct: 322 Y 322
>gi|401881256|gb|EJT45558.1| ubiquitin thiolesterase 9 [Trichosporon asahii var. asahii CBS
2479]
Length = 850
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC--KASQD 65
+C LV A ++M I + PNIL + LKRF G++ K + C + ++D
Sbjct: 392 TCCGLVEAERRMRIKELPNILGLHLKRFRQDDMGRLHKLFYRVTFPLQLRVPCTTEETED 451
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVLSEKV-- 120
+ Y+LF +VH G +P GHY ++ G+W C+D + S L + +
Sbjct: 452 AERLYELFAVVVHIGNTPTHGHYVTIVRSQPGQWVMCDDENIEPIEESDLANYFGDNITG 511
Query: 121 --YILFFIRAN 129
Y+LF+ AN
Sbjct: 512 AGYVLFYQAAN 522
>gi|167526465|ref|XP_001747566.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774012|gb|EDQ87646.1| predicted protein [Monosiga brevicollis MX1]
Length = 532
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 14 SARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFEEVLVLSSFMCKASQ-DPQP-- 68
+A+K ++ +P +L I LKRF + K+ +A VL LS ++ + P+P
Sbjct: 385 NAQKYTRLISAPQVLKIHLKRFRWQQTDRCKLQYHVACPLVLDLSPYLAADHEGTPKPIA 444
Query: 69 -----EYKLFGTIVHSGFSPDSGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYI 122
Y L +VH G S +GHY A + + IG W ND+ VSV+T ++VL + YI
Sbjct: 445 SRGTALYDLMAMVVHEGSSLTAGHYKALVYNPTIGAWVVKNDARVSVTTAEDVLERQAYI 504
Query: 123 LFFIR 127
LF+++
Sbjct: 505 LFYVQ 509
>gi|357142018|ref|XP_003572430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Brachypodium distachyon]
Length = 773
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD-PQPEYKLF 73
A + + + + P +L IQLKR K+ ++F E+L + FM + +D Y+L
Sbjct: 649 ATQTILLTKLPPVLTIQLKRSAADLS-KLVGHVSFNEILHVGPFMDPSCEDKDNSSYRLV 707
Query: 74 GTIVHSGFSPDSGHYYAYIK------DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
G I H G + GHY AY++ W C NDS + +LQEVL + YILF+ R
Sbjct: 708 GVIEHIGSTLRGGHYIAYVRADRNQQSGSSSWVCANDSSIREVSLQEVLRCEAYILFYER 767
Query: 128 ANQR 131
+
Sbjct: 768 MEEE 771
>gi|332215940|ref|XP_003257099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Nomascus leucogenys]
Length = 916
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 754 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 813
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 814 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 871
Query: 124 FFIR 127
F+ R
Sbjct: 872 FYQR 875
>gi|40795667|ref|NP_955475.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Homo sapiens]
gi|2656143|gb|AAC27356.1| UnpES [Homo sapiens]
gi|119585373|gb|EAW64969.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
gi|119585377|gb|EAW64973.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
Length = 916
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 754 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 813
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 814 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 871
Query: 124 FFIR 127
F+ R
Sbjct: 872 FYQR 875
>gi|383409703|gb|AFH28065.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
gi|384942172|gb|AFI34691.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
Length = 916
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 754 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNPSA 813
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 814 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 871
Query: 124 FFIR 127
F+ R
Sbjct: 872 FYQR 875
>gi|114586840|ref|XP_001163407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 7 [Pan
troglodytes]
gi|397495143|ref|XP_003818420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Pan
paniscus]
gi|410227906|gb|JAA11172.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259862|gb|JAA17897.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289714|gb|JAA23457.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353789|gb|JAA43498.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 915
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 753 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 812
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 813 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 870
Query: 124 FFIR 127
F+ R
Sbjct: 871 FYQR 874
>gi|452824642|gb|EME31643.1| ubiquitin carboxyl-terminal hydrolase 36/42 [Galdieria sulphuraria]
Length = 605
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFM-CKASQDPQ 67
CK+ A K + PN+ + LKRF K +K ++++E S F+ K + +
Sbjct: 286 CKQRTDASKVFQFRRIPNVFIFHLKRFR--LSKKENKFVSYDETFDFSPFIPLKGNSIRK 343
Query: 68 P-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV 115
P Y+L IVH GFS GHYYAY++++ G WY +D S Q+V
Sbjct: 344 PVYYRLCAVIVHEGFSIHGGHYYAYVRNSNGIWYLKDDECTSRVVQQKV 392
>gi|426249549|ref|XP_004018512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Ovis
aries]
Length = 963
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|125604091|gb|EAZ43416.1| hypothetical protein OsJ_28021 [Oryza sativa Japonica Group]
Length = 784
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 10/111 (9%)
Query: 25 PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD-PQPEYKLFGTIVHSGFSP 83
P +LVIQLKR G K+ + ++F+E+L + F+ +S+D Y+L G + H G S
Sbjct: 673 PPVLVIQLKRNTGPI--KVRRHVSFKEILDVGLFLHPSSEDKDNSSYRLVGVVEHLGHSM 730
Query: 84 DSGHYYAYIK-------DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
SGHY AY++ + W+ +D+ + +L+EVL + YILF+ R
Sbjct: 731 YSGHYVAYVRPSPPQQTNGSSSWFWASDTDIREVSLEEVLKCEAYILFYER 781
>gi|194374643|dbj|BAG62436.1| unnamed protein product [Homo sapiens]
Length = 452
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 31/144 (21%)
Query: 14 SARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQDP 66
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 308 NAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEENT 367
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIK-----------------------DAIGRWYCCN 103
+ Y L+G + HSG + SGHY AY K ++ G+W+ +
Sbjct: 368 RVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMESKGQWFHIS 426
Query: 104 DSYVSVSTLQEVLSEKVYILFFIR 127
D++V +VL+ + Y+LF+ R
Sbjct: 427 DTHVQAVPTTKVLNSQAYLLFYER 450
>gi|195119638|ref|XP_002004337.1| GI19875 [Drosophila mojavensis]
gi|193909405|gb|EDW08272.1| GI19875 [Drosophila mojavensis]
Length = 838
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG----IFGGKIDKAIAFEEVLVLSSFMCKASQ 64
CKKL A +++ I Q+P L++ LK+F+ F K+ + +E +++ + Q
Sbjct: 607 CKKLCDAERRIGITQAPRNLILTLKQFKYDQKYHFRTKLMHKVFHDESVIVKVCATDSLQ 666
Query: 65 DP-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS----EK 119
+ Y L+ +VH+G+S DSGHY+ + D W+ NDS V+ S QE+ S
Sbjct: 667 ETCTVHYDLYAGVVHAGYSMDSGHYFTFAADQSKNWFKFNDSLVTNSKPQEMHSLTSPNT 726
Query: 120 VYILFF 125
YILF+
Sbjct: 727 PYILFY 732
>gi|302674485|ref|XP_003026927.1| hypothetical protein SCHCODRAFT_83497 [Schizophyllum commune H4-8]
gi|300100612|gb|EFI92024.1| hypothetical protein SCHCODRAFT_83497 [Schizophyllum commune H4-8]
Length = 334
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 20 SILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE---------- 69
+I +P IL +QLKRF + K+ + + E+L + +M ++ DP
Sbjct: 126 TIHDAPRILALQLKRFTHVLT-KLSGSCGYTEILDIEPYMSTSNTDPTASTQHNDRPSTL 184
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR-- 127
Y+L+ + H G + GHY A++K G+W NDS V V+ E Y+ F+ R
Sbjct: 185 YRLYAVVCHIGPAIHQGHYLAWVKTGEGKWAIMNDSSVIVTDTLSASEEDGYLFFYERVD 244
Query: 128 -ANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAV 166
A + A+ ++ V+G PL A
Sbjct: 245 GAEAEALRADMQVPQEAANLRRRARQTLANVRG--PLAAT 282
>gi|189217810|ref|NP_001121345.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus laevis]
gi|281312478|sp|B1WBD7.1|UBP20_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|171846441|gb|AAI61716.1| LOC100158436 protein [Xenopus laevis]
Length = 840
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L+ P +L I LKRF E ++ KI ++F E L L F+ K
Sbjct: 489 CKKLRNGVKYCKVLRLPEVLCIHLKRFRHEVMYSFKIGSHVSFPLEGLNLRPFLAKECVS 548
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G S SGHY +Y ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 549 RITTYDLLAVICHHG-SASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLF 607
Query: 125 FIRANQ 130
+ ++++
Sbjct: 608 YRKSSE 613
>gi|449675268|ref|XP_004208370.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like, partial
[Hydra magnipapillata]
Length = 284
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI-FGGKIDKAIAFEEVLVLSSFMCKAS-QDP 66
CKK K I + P +LV+ LKRF G F K++ + F +V+ L F +S Q
Sbjct: 161 CKKSRKCFKGFLIERFPKVLVLHLKRFSGQRFRSKLETKVEFPKVISLKEFSSDSSDQRI 220
Query: 67 QPEYKLFGTIVHSGFSPDSGHYYAYIKDA-IGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
+P Y L+G + HSG GHY +++K G W+ NDS V +++ ++S Y+LF+
Sbjct: 221 EPVYNLYGVVNHSG-GTLGGHYTSFVKHPDTGSWHIYNDSIVGETSVSRLISASAYLLFY 279
>gi|413968370|gb|AFW90523.1| ubiquitin carboxyl-terminal hydrolase 24-like protein [Phaseolus
vulgaris]
Length = 530
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 12 LVSARKQMSILQSPNILVIQLKRF-EGIFGG-KIDKAIAFEEVLVLSSFMCKASQDPQPE 69
+V+ARK + I+ P I+++ L RF G G K+ KA+ F LVL + + +
Sbjct: 412 VVTARKSVQIVTLPKIMILHLMRFGYGSQGSTKLHKAVHFPLELVLGRDLLVSPSTEGRK 471
Query: 70 YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
Y+L TI H G P GHY A + GRW +D+ V +VL ++ Y+LF+
Sbjct: 472 YELVATITHHGREPSKGHYTADAQYPNGRWLRFDDASVFAIGTNKVLHDQAYVLFY 527
>gi|154152175|ref|NP_001093789.1| ubiquitin carboxyl-terminal hydrolase 4 [Bos taurus]
gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|151554732|gb|AAI50121.1| USP4 protein [Bos taurus]
gi|296474786|tpg|DAA16901.1| TPA: ubiquitin specific protease 4 [Bos taurus]
Length = 963
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Coccomyxa subellipsoidea C-169]
Length = 380
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG--KIDKAIAFE-EVLVLSSFMCKASQD 65
CK+ V A K++ + P +LV+ LKRF K+D + F L LSSF+ + QD
Sbjct: 215 CKEHVRAEKKLDLWSLPELLVVHLKRFSYSRHSRDKLDAPVHFPLSALDLSSFLLR-EQD 273
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFF 125
P Y L+ H G GHY AY + W+C +DS+VS + V S+ Y+LF+
Sbjct: 274 VAPVYDLYAVSNHFG-GLGGGHYTAYCRMDDDGWHCFDDSHVSPADESSVQSKAAYLLFY 332
Query: 126 IRANQRPVSANGTFA 140
R ++ + T +
Sbjct: 333 RRRHEAQLEPGATLS 347
>gi|426363284|ref|XP_004048773.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 20 [Gorilla gorilla gorilla]
Length = 922
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAF---------EEVLVLSS 57
CKKL + K +L+ P IL I LKRF E ++ KI+ ++F E L L
Sbjct: 563 CKKLRNGVKYCKVLRLPEILCIHLKRFRHELMYSFKINSHVSFPLRGSTXXXXEGLDLRP 622
Query: 58 FMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVL 116
F+ K Y L I H G + SGHY AY ++ I G+WY +D YV+ V
Sbjct: 623 FLAKECTSQITTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQ 681
Query: 117 SEKVYILFFIRANQRPV 133
+ + Y+LF+ ++++ V
Sbjct: 682 NAEGYVLFYRKSSEEAV 698
>gi|440893726|gb|ELR46396.1| Ubiquitin carboxyl-terminal hydrolase 4 [Bos grunniens mutus]
Length = 963
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|118083792|ref|XP_416693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Gallus gallus]
Length = 810
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 74/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P IL + LKRF+ G K+++ I F EV+ L+ F CK A +
Sbjct: 664 TNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNRHIKFPEVIDLAPFCTVKCKNVAEGN 723
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK---------DAI---------------GRWYC 101
+ Y L+G + HSG + SGHY AY K D I G+W+
Sbjct: 724 TKVLYSLYGVVEHSG-TMRSGHYTAYAKMRNMNNHLSDLILQGQPPQALETEPIKGQWFH 782
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V + +VLS + Y+LF+ R
Sbjct: 783 ISDTHVQAVSTSKVLSSQAYLLFYER 808
>gi|303281438|ref|XP_003060011.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458666|gb|EEH55963.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 585
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 66/138 (47%), Gaps = 31/138 (22%)
Query: 17 KQMSILQSPNILVIQLKRFE----------GIFGG-KIDKAIAFEEVLVLSSFMCK---- 61
KQM+I + P L + LKRFE G GG KI+ ++F VL + ++
Sbjct: 442 KQMAIRRLPPTLALHLKRFEHGGAKKQNAHGDGGGSKIESHVSFPFVLPMRAYCASTAIR 501
Query: 62 --------------ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYV 107
+ DP+ Y LF +VHSG DSGHY AY++ G W+ C+D V
Sbjct: 502 ERYGNRLTPMSDGGGADDPK-NYDLFAVVVHSGQGSDSGHYIAYVQ-WQGAWFRCDDHQV 559
Query: 108 SVSTLQEVLSEKVYILFF 125
+ + V + + Y+LF+
Sbjct: 560 TRADPITVATAQAYLLFY 577
>gi|426249551|ref|XP_004018513.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Ovis
aries]
Length = 916
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 754 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPVRGLNMSEFVCDPSA 813
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS++ +++++ Y+L
Sbjct: 814 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVL 871
Query: 124 FFIRAN 129
F+ R +
Sbjct: 872 FYQRRD 877
>gi|302794831|ref|XP_002979179.1| hypothetical protein SELMODRAFT_2719 [Selaginella moellendorffii]
gi|300152947|gb|EFJ19587.1| hypothetical protein SELMODRAFT_2719 [Selaginella moellendorffii]
Length = 350
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI---FGGKIDKAIAFE-EVLVLSSFMCKASQ 64
CK + K++SI ++P++LV+ +KRF G+ K D+ + + L LSSFM SQ
Sbjct: 234 CKAPQISTKKLSIYRAPSVLVLHIKRFYGVEPRSYRKDDRPVVYPLNGLDLSSFMRHLSQ 293
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Q Y L+G H G S GHY A + WYC NDS SV+++Q+ + YILF
Sbjct: 294 Q-QATYDLYGVCSHFG-SLGYGHYTATCRSVDNGWYCYNDS--SVTSVQDPVDSSAYILF 349
Query: 125 F 125
+
Sbjct: 350 Y 350
>gi|406696946|gb|EKD00217.1| ubiquitin thiolesterase 9 [Trichosporon asahii var. asahii CBS
8904]
Length = 1145
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMC--KASQD 65
+C LV A ++M I + PNIL + LKRF G++ K + C + ++D
Sbjct: 392 TCCGLVEAERRMRIKELPNILGLHLKRFRQDDMGRLHKLFYRVTFPLQLRVPCTTEETED 451
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVLSEKV-- 120
+ Y+LF +VH G +P GHY ++ G+W C+D + S L + +
Sbjct: 452 AERLYELFAVVVHIGNTPTHGHYVTIVRSQPGQWVMCDDENIEPIEESDLANYFGDNITG 511
Query: 121 --YILFFIRAN 129
Y+LF+ AN
Sbjct: 512 AGYVLFYQAAN 522
>gi|327265717|ref|XP_003217654.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Anolis
carolinensis]
Length = 908
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 6/128 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C +
Sbjct: 759 NCKKHQQATKKFDLWSLPRILVVHLKRFSYNRYWRDKLDTVVEFPIRDLNMSEFVCDPAA 818
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G GHY AY K+ I G+WY +DS VS ++ ++++++ Y+L
Sbjct: 819 SPYV-YDLIAVSNHYG-GMGVGHYTAYAKNKINGKWYYFDDSSVSPASEEQIVTKAAYVL 876
Query: 124 FFIRANQR 131
F+ R + +
Sbjct: 877 FYQRRDDK 884
>gi|126339681|ref|XP_001370825.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like
[Monodelphis domestica]
Length = 716
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 12/124 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKAS-QD 65
L A+KQ+ + + P +L + LKRF + G KI + F+E+L + + + S +
Sbjct: 557 LTEAQKQLMVCRLPQVLRLHLKRFR--WSGRNHREKIGVHVGFDEILNMEPYCYRESLKS 614
Query: 66 PQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
+P+ Y L ++H G SGHY AY ++ G W CNDS +++ TL+EV + Y
Sbjct: 615 LRPDCFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLNMCTLEEVCKAQAY 674
Query: 122 ILFF 125
ILF+
Sbjct: 675 ILFY 678
>gi|387019603|gb|AFJ51919.1| Ubiquitin carboxyl-terminal hydrolase 16-like [Crotalus adamanteus]
Length = 825
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 30/144 (20%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CKASQDPQ 67
+A+KQM I +P IL + LKRF+ G K++K I F EV+ L+ F CK ++
Sbjct: 681 TNAKKQMLISHAPPILTLHLKRFQQAGYNLQKVNKHITFPEVMDLAPFCSIKCKNVREGT 740
Query: 68 PE--YKLFGTIVHSGFSPDSGHYYAYIK------------DAIG----------RWYCCN 103
+ Y L+G + HSG + SGHY AY+K D I +W+ +
Sbjct: 741 SKVLYSLYGIVEHSG-TMRSGHYTAYVKTSTTSQLSDLVHDKIQQTSESESPRRQWFHVS 799
Query: 104 DSYVSVSTLQEVLSEKVYILFFIR 127
D++V ++ +VL + Y+LF+ R
Sbjct: 800 DTHVQAVSISKVLKSQAYLLFYER 823
>gi|380092726|emb|CCC09479.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 520
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 21/142 (14%)
Query: 3 DLCLFSCKKLVS---ARKQMSILQSPNILVIQLKRFEGIFG-----GKIDKAIAFEEVLV 54
D C + C+ S AR+Q SI + PN+L IQLKRFE G KI+ + F L
Sbjct: 377 DKCEYRCQNCNSVQQARRQTSIKKLPNVLSIQLKRFEFKQGRNDRAQKIETPVQFPLQLN 436
Query: 55 LSSFMCKA-SQDPQPEYK--------LFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCND 104
+ + +A +QD + +Y+ L +VH G D+GHY +Y + +G +W+ ND
Sbjct: 437 MLPYTTRARTQDLKQDYELQRSCTYDLLCVVVHVG-DMDTGHYISYCR--VGEQWFAFND 493
Query: 105 SYVSVSTLQEVLSEKVYILFFI 126
V ++ +VL+ K Y+LF+I
Sbjct: 494 HKVELAQKSDVLNAKAYLLFYI 515
>gi|123471494|ref|XP_001318946.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121901718|gb|EAY06723.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 446
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK+ + + +PNIL+I + RF K ++ + F + L F+ +
Sbjct: 226 CKQAGTCSTRTKFADTPNILIITMMRFTATVN-KDERQVDFGLNIDLKEFV---EDGVEH 281
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
Y+LF I HSG + GH+ ++K G WY C+D+ ++ T Q VL K Y+LF+ R
Sbjct: 282 FYELFAVINHSGHQVNRGHFTCFVKCNGGSWYNCDDTKITKDTAQNVLDSKPYVLFYKRV 341
Query: 129 N 129
+
Sbjct: 342 H 342
>gi|320162607|gb|EFW39506.1| hypothetical protein CAOG_00031 [Capsaspora owczarzaki ATCC 30864]
Length = 1105
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
C KL A K +S+ P +L + +KRF + K+ + + F E L + F+ S +
Sbjct: 762 CNKLCDALKTLSVHVLPEVLCLHIKRFRHDSYLSSKLSQPVQFPLEGLDMRPFLAPGSTE 821
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L + H G +SGHY AY + GRW+ +DS + ++Q+VL ++ YILF
Sbjct: 822 TNTLYTLNAVVSHRG-GVNSGHYVAYAQHPQSGRWFEYDDSDTTEVSVQDVLDQEAYILF 880
Query: 125 FIR 127
+ R
Sbjct: 881 YSR 883
>gi|414869615|tpg|DAA48172.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 1054
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 25 PNILVIQLKRF-EGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPE-YKLFGTIVHSGF- 81
P +L +QLKR I G KI + F E L + FM + D ++L +VH G
Sbjct: 929 PPVLTLQLKRTSHHIVGSKISDHVRFMEYLDVERFMDPSCADKGSTLFRLAAVVVHIGMG 988
Query: 82 SPDSGHYYAYIK-------DAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRANQRPVS 134
S SGHY AY++ W+C +DS + T+++VL+ + YILF+ R + VS
Sbjct: 989 SLKSGHYIAYVRARKLGCQQEEASWFCADDSQIRRVTIEQVLNSQAYILFYERMEDQDVS 1048
>gi|335300577|ref|XP_003358945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 1
[Sus scrofa]
Length = 823
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 677 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 736
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK---------DAI---------------GRWYC 101
+ Y L+G + HSG + SGHY AY K D + G+W+
Sbjct: 737 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSDLVLHGDIPQDFEMESTKGQWFH 795
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 796 ISDTHVQAVPTTKVLNSQAYLLFYER 821
>gi|13435422|gb|AAH04577.1| Usp16 protein, partial [Mus musculus]
Length = 382
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM + +P +L + LKRF+ G K++K I F E+L L+ F CK A +
Sbjct: 236 TNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEES 295
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K+ G+W+
Sbjct: 296 TRVLYSLYGVVEHSG-TMRSGHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFH 354
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V + +VL+ + Y+LF+ R
Sbjct: 355 ISDTHVQAVPITKVLNSQAYLLFYER 380
>gi|440295045|gb|ELP87974.1| hypothetical protein EIN_418530 [Entamoeba invadens IP1]
Length = 600
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 13/181 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
CK A K+ + + P +L IQ+KRF G KI+ + F L +S + D
Sbjct: 242 CKTSSKASKRYFVKELPWVLAIQIKRF-GWDERKINGFVKFPSELNMSKYGKDGLFD--- 297
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
L+G IVH G + GHY YIK W+ C+D V+ ++ VL + Y+LF+ R+
Sbjct: 298 ---LYGVIVHLGRTKHGGHYICYIKGPNSGWFQCDDDTVTSVPIKTVLKSEGYMLFYKRS 354
Query: 129 NQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKAVATKPSAEQSSRKTPSTISKVEK 188
N+ + ++ +N V+ ++ +A + K + K + ++++ TI+++E+
Sbjct: 355 NETVLKSD----TNKVEKQKDDIDALSALMKMANDKETSVK--QQNATKQEQVTINEMEE 408
Query: 189 V 189
+
Sbjct: 409 I 409
>gi|332029700|gb|EGI69579.1| Ubiquitin carboxyl-terminal hydrolase 22 [Acromyrmex echinatior]
Length = 501
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 26/143 (18%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEG------IFGGKIDKAIAFEEVLVLSSFMC- 60
+C+ + KQ+++ Q P + + LKRFE IF KI I+F E L ++ FM
Sbjct: 352 NCETYQESTKQLTMKQLPIVAIFHLKRFEHFIIQDKIFKKKISTFISFPEQLDMTPFMSH 411
Query: 61 ---------------KASQD---PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCC 102
K +D Y LF I H G S ++GHY A+I+ +W+ C
Sbjct: 412 RRNGNNNSAMLNGLSKNGEDMSFSDNRYSLFAVINHEG-SLETGHYTAFIRQQRDQWFKC 470
Query: 103 NDSYVSVSTLQEVLSEKVYILFF 125
ND ++ + L++VL+ + Y+LF+
Sbjct: 471 NDHLITRAKLKDVLTSEGYLLFY 493
>gi|335300579|ref|XP_003358946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 2
[Sus scrofa]
Length = 808
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 662 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 721
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK---------DAI---------------GRWYC 101
+ Y L+G + HSG + SGHY AY K D + G+W+
Sbjct: 722 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSDLVLHGDIPQDFEMESTKGQWFH 780
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 781 ISDTHVQAVPTTKVLNSQAYLLFYER 806
>gi|302813726|ref|XP_002988548.1| hypothetical protein SELMODRAFT_2558 [Selaginella moellendorffii]
gi|300143655|gb|EFJ10344.1| hypothetical protein SELMODRAFT_2558 [Selaginella moellendorffii]
Length = 350
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 8/121 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGI---FGGKIDKAIAFE-EVLVLSSFMCKASQ 64
CK + K++SI ++P++LV+ +KRF G+ K D+ + + L LSSFM SQ
Sbjct: 234 CKAPQISTKKLSIYRAPSVLVLHIKRFYGVEPRSYRKDDRPVVYPLNGLDLSSFMRHFSQ 293
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Q Y L+G H G S GHY A + WYC NDS SV+++Q+ + YILF
Sbjct: 294 Q-QATYDLYGVCSHFG-SLGYGHYTATCRSVDNGWYCYNDS--SVTSVQDPVDSSAYILF 349
Query: 125 F 125
+
Sbjct: 350 Y 350
>gi|297804390|ref|XP_002870079.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
lyrata]
gi|297315915|gb|EFH46338.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
lyrata]
Length = 1082
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+C + VS KQM + + P + LKRF+ G F KI K + + L +M + ++
Sbjct: 738 TCNEKVSKEKQMLLDKLPLVATFHLKRFKTNGFFMEKIFKHVKIPLEIDLQPYMRNSQEN 797
Query: 66 P-QPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
+Y L+ + H G+S GHY +Y++ A W+ +DS V+ VLS+ YILF
Sbjct: 798 EVSTKYHLYALVEHLGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDRVLSQDSYILF 857
Query: 125 FIR 127
+ R
Sbjct: 858 YAR 860
>gi|330822614|ref|XP_003291744.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
gi|325078064|gb|EGC31737.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
Length = 984
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 69/137 (50%), Gaps = 19/137 (13%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ I +P ILV+ LKRF + + K+D + F + L LS ++ +Q
Sbjct: 785 NCKKHQRAFKKFDIWSAPPILVVHLKRFSYKKHYRDKLDTLVKFPIKDLDLSKYVLSKNQ 844
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYI--------------KDAIGRWYCCNDSYVSVS 110
P P Y LF H G S GHY AY + G+WY +DS+VS +
Sbjct: 845 -PPPIYDLFAVSNHYG-SLGGGHYTAYALNEPETKEAKANGNSNGNGKWYKFDDSHVSEA 902
Query: 111 TLQEVLSEKVYILFFIR 127
++ V SE Y+LF+ R
Sbjct: 903 NVENVESEAAYVLFYRR 919
>gi|407425419|gb|EKF39412.1| ubiquitin hydrolase, putative [Trypanosoma cruzi marinkellei]
Length = 732
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 13 VSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSF------------MC 60
V A K+ + + P +L+I +KRF GGK+ K I + +VL L+ F C
Sbjct: 327 VRATKRFQLHKLPPVLIIHMKRF-NCMGGKVTKYIQYPKVLNLAPFCTDKGRKTKAASRC 385
Query: 61 KASQDPQPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
D Y+L +H G GHYY+ ++ G W CND VS + L
Sbjct: 386 DVDGDETNRSCLYELNAICIHEGNLLVYGHYYSVVRARNGMWLVCNDERVSYCDEERALR 445
Query: 118 EKVYILFFIRANQRPVSANGT 138
++ Y+LF+ R + A T
Sbjct: 446 QQAYMLFYSRVEPSSLGAKCT 466
>gi|149742213|ref|XP_001499655.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 2
[Equus caballus]
gi|149742215|ref|XP_001499642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform 1
[Equus caballus]
Length = 826
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 32/147 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 680 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 739
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK------------------------DAIGRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 740 TKVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMQSTKGQWFH 798
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIRA 128
+D++V +VL+ + Y+LF+ R
Sbjct: 799 ISDTHVQAVPTTKVLNSQAYLLFYERV 825
>gi|297712603|ref|XP_002832836.1| PREDICTED: inactive ubiquitin carboxyl-terminal hydrolase 17-like
protein 7-like, partial [Pongo abelii]
Length = 236
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 46 AIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDS 105
++ + E L + +M + + P Y L+ +VH+G+S +GHY++Y+K G+WY +D+
Sbjct: 1 SVPYPECLDMQPYMSQQNAGPLV-YVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDA 59
Query: 106 YVSVSTLQEVLSEKVYILFFIRANQ 130
V+ S + VLS++ Y+LF+I+ ++
Sbjct: 60 EVTASGITSVLSQQAYVLFYIQKSE 84
>gi|340058703|emb|CCC53063.1| putative ubiquitin hydrolase [Trypanosoma vivax Y486]
Length = 713
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 31/143 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA---------- 62
V A KQ + PN+L+I LKRF G K+ K +++ VL ++ F C A
Sbjct: 344 VHAAKQFKLHGVPNVLIIHLKRFNGF--QKVGKHVSYPMVLDMTPF-CTADGTLKSLRKD 400
Query: 63 ------------------SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCND 104
S +Y+L VH G S GHYY+ ++ G W CND
Sbjct: 401 REGDIKHSGDSVFYGASDSDTSVCKYELNAICVHEGSSLHYGHYYSIVRGRNGAWLLCND 460
Query: 105 SYVSVSTLQEVLSEKVYILFFIR 127
VS ++ S+ YILF+ R
Sbjct: 461 ERVSSCDMERARSKPAYILFYSR 483
>gi|410919595|ref|XP_003973269.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49-like [Takifugu
rubripes]
Length = 670
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKASQDP 66
L A KQ+ I + P +L + LKRF + G KI +AF++VL + + C S
Sbjct: 544 LSEACKQLLIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVAFDQVLNIKPYCCTGSGHS 601
Query: 67 QPE----YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
Y L ++H G SGHY AY + G W CNDS + V +++EV + + Y
Sbjct: 602 VHRGGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMKVCSVEEVCNTQAY 661
Query: 122 ILFF 125
ILF+
Sbjct: 662 ILFY 665
>gi|409081365|gb|EKM81724.1| hypothetical protein AGABI1DRAFT_118809 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1253
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 51/268 (19%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG--IFGGKIDKAIAFE------EVLVLSSFMC 60
CKK A K+ + ++P++LV+ LKRF KID I F E +V +
Sbjct: 896 CKKHQQATKRFDLWKAPDVLVVHLKRFSNSRTLRDKIDAFIDFPIQDLNLEDMVRERRVA 955
Query: 61 KASQ--------------DPQPEYKLFGTIVHSGFSPDSGHYYAYI-KDAIGRWYCCNDS 105
KA Q D Y LFG H G GHY AY+ A WY +DS
Sbjct: 956 KALQAEGVNIEELNLTNLDEPLIYDLFGVDEHMG-GLGGGHYRAYVLNHANEEWYHFDDS 1014
Query: 106 YVSVSTLQEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKEAYKGVKGTVPLKA 165
+V + ++ ++ Y+LF+ R +P+ G + H+ E ++ T P
Sbjct: 1015 FVRPAKAEDAVNADAYLLFYRRRTTKPL---GGRLQERISEHKAKAEEHRNSVDTSP--- 1068
Query: 166 VATKPSAEQSSRKTPSTISKVEKVPSNPR-LKFSISGSSGCKGVPP--------TSNGKV 216
P E+++ +PS +S +P+ P KF+ K PP SNG
Sbjct: 1069 ----PPVEETA--SPSKLSADNGLPTPPEDSKFTY------KSPPPGDLSDRLDDSNGSW 1116
Query: 217 NVHKSQSVKMNGVVKDSVPKEKSGKDPF 244
+ S+ V +D E+S DP
Sbjct: 1117 TMQSGPSISPLTVSEDPPDFEESLSDPL 1144
>gi|449479063|ref|XP_002187377.2| PREDICTED: uncharacterized protein LOC100225609 [Taeniopygia
guttata]
Length = 819
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 19 MSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQPEYKLFGTIVH 78
+++ ++P +L + L+R + G KI+K + + E L L +M + +P L+ ++H
Sbjct: 319 VTVHRAPRVLTLCLERADQWTGTKINKFVEYPEYLDLRPYMSDTAGEPL-LCSLYAIVIH 377
Query: 79 SGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIRA 128
SG + GH+ Y+K + G WY +D V + VL ++ Y+LF+ RA
Sbjct: 378 SGDTCLEGHFLCYVKASNGLWYRMDDESVDNCDIHTVLGQQAYLLFYARA 427
>gi|403364554|gb|EJY82041.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1072
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFE-EVLVLSSFMCKA 62
CKK A K++ I + P+IL+I LKRF+ F G KI++ ++F L LS ++ +
Sbjct: 512 CKKHQPATKKIDIWKLPSILIICLKRFK--FLGRNKYLKINEQVSFPMNNLDLSPYIS-S 568
Query: 63 SQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVS-VSTLQEVLSEKV 120
Q +P Y LF H G + GHYYAY + R WY ND + + LQ++ S +
Sbjct: 569 PQREKPIYDLFSVANHEG-TMTQGHYYAYTWNHASRNWYYFNDHEIKLIKNLQKIQSPEA 627
Query: 121 YILFF 125
YILF+
Sbjct: 628 YILFY 632
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 236 NCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 295
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 296 RPY-VYDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 353
Query: 124 FFIR 127
F+ R
Sbjct: 354 FYQR 357
>gi|395849021|ref|XP_003797135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 1
[Otolemur garnettii]
gi|395849023|ref|XP_003797136.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2
[Otolemur garnettii]
Length = 827
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 681 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 740
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK------------------------DAIGRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 741 TKVMYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDVPQDFEMESTKGQWFH 799
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 800 ISDTHVQAVPATKVLNSQAYLLFYER 825
>gi|147906984|ref|NP_001084641.1| ubiquitin carboxyl-terminal hydrolase 44-A [Xenopus laevis]
gi|82185409|sp|Q6NTR6.1|UP44A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 44-A; AltName:
Full=Deubiquitinating enzyme 44-A; AltName:
Full=Ubiquitin thioesterase 44-A; AltName:
Full=Ubiquitin-specific-processing protease 44-A
gi|46249634|gb|AAH68889.1| MGC83063 protein [Xenopus laevis]
Length = 690
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 6 LFSCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMC 60
+++C + A+KQ+ + + P +L + LKRF + G KI + F+++L + + C
Sbjct: 537 IYACDQCNKAQKQLMVCRLPQVLRLHLKRFR--WSGRNHREKIGVHVRFDQMLNMEPYCC 594
Query: 61 KASQDPQPE----YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEV 115
+ S Y L ++H G SGHY A+ + G W CNDS + T++EV
Sbjct: 595 RESTAALRADCFIYDLSSVVMHHGKGFGSGHYTAFCYNPEGGFWVHCNDSKLHSCTVEEV 654
Query: 116 LSEKVYILFFIRANQRPVSANGTFA 140
+ YILF+ QR NG +
Sbjct: 655 CKAQAYILFY---TQRVTQENGHLS 676
>gi|395849025|ref|XP_003797137.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 3
[Otolemur garnettii]
Length = 812
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 666 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 725
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 726 TKVMYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDVPQDFEMESTKGQWFH 784
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 785 ISDTHVQAVPATKVLNSQAYLLFYER 810
>gi|410970128|ref|XP_003991541.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 16 [Felis catus]
Length = 826
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 32/147 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 680 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 739
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK------------------------DAIGRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 740 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQWFH 798
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIRA 128
+D++V +VL+ + Y+LF+ R
Sbjct: 799 ISDTHVQAVPTTKVLNSQAYLLFYERV 825
>gi|197099624|ref|NP_001125307.1| ubiquitin carboxyl-terminal hydrolase 4 [Pongo abelii]
gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|55727639|emb|CAH90574.1| hypothetical protein [Pongo abelii]
Length = 963
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 801 NCKKHQQATKKSDLWSLPKILVVHLKRFSYNRYWRDKLDTVVEFPIRGLNMSEFVCNLSA 860
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 861 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 918
Query: 124 FFIR 127
F+ R
Sbjct: 919 FYQR 922
>gi|336467423|gb|EGO55587.1| hypothetical protein NEUTE1DRAFT_131302 [Neurospora tetrasperma
FGSC 2508]
gi|350287934|gb|EGZ69170.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
Length = 522
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 21/142 (14%)
Query: 3 DLCLFSCKKLVS---ARKQMSILQSPNILVIQLKRFEGIFG-----GKIDKAIAFEEVLV 54
D C + C+ S AR+Q SI + PN+L IQLKRFE G KI+ + F L
Sbjct: 379 DKCEYRCQNCNSVQQARRQTSIKKLPNVLSIQLKRFEFKQGRNDRAQKIETPVQFPLQLN 438
Query: 55 LSSFMCKA-SQDPQPEYK--------LFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCND 104
+ + +A +QD + Y+ L +VH G D+GHY +Y + +G +W+ ND
Sbjct: 439 MLPYTTRARTQDLKDNYELQRSCTYDLLCVVVHVG-DMDTGHYISYCR--VGDQWFAFND 495
Query: 105 SYVSVSTLQEVLSEKVYILFFI 126
V ++ +VL+ K Y+LF+I
Sbjct: 496 HKVELAQKSDVLNAKAYLLFYI 517
>gi|195029323|ref|XP_001987523.1| GH19918 [Drosophila grimshawi]
gi|193903523|gb|EDW02390.1| GH19918 [Drosophila grimshawi]
Length = 837
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKA------ 62
CKKL A +++ I Q+P L++ LK+F K D+ F L+ F ++
Sbjct: 606 CKKLCDAERRIGITQAPRNLILTLKQF------KYDQKYHFRTKLMHKVFHDESVNVKVC 659
Query: 63 SQDPQPE-----YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
S D E Y L+ +VH+G+S DSGHY+ + D W+ NDS V+ S QE+ S
Sbjct: 660 STDSLQETCTVHYDLYAGVVHAGYSMDSGHYFTFAADQSKNWFKFNDSLVTNSKPQEMHS 719
Query: 118 ----EKVYILFF 125
YILF+
Sbjct: 720 LTSPNTPYILFY 731
>gi|126325335|ref|XP_001373230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Monodelphis
domestica]
Length = 814
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
A+KQM I Q+P IL + LKRF+ G+ K++K I F +V+ L+ F CK A +
Sbjct: 666 TDAKKQMLISQAPPILTLHLKRFQQAGLNLCKVNKHIKFPDVIDLAPFCTIKCKNVAEGN 725
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + GHY AY+K G+W+
Sbjct: 726 TKVLYSLYGVVEHSG-TMRWGHYTAYVKTRTSNSHLYNLVLDGTSPQEFENESTKGQWFH 784
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 785 ISDTHVQAVPASKVLNSQAYLLFYER 810
>gi|212722906|ref|NP_001132802.1| uncharacterized protein LOC100194291 [Zea mays]
gi|194695428|gb|ACF81798.1| unknown [Zea mays]
gi|413937406|gb|AFW71957.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 417
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C L A K+M I ++P ILVI LKRF+ I K +++ V L + S D
Sbjct: 273 CCSLQEAEKRMKIKKAPQILVIHLKRFKFIEQLNRHKKLSYRVVYPLELKLSSNSADADC 332
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL--------- 116
EY LF +VH G P+ GHY A IK + W +D V + STLQ
Sbjct: 333 EYSLFAVVVHLGSGPNQGHYVAMIK-SHDHWLSFDDDNVEMIPESTLQTFYGSYHEYSGN 391
Query: 117 SEKVYILFFIR----ANQRPVSANG 137
++ YILF+ R N++ S++G
Sbjct: 392 TDHGYILFYGRIGGSGNEKTDSSDG 416
>gi|291400943|ref|XP_002716825.1| PREDICTED: ubiquitin specific protease 16 [Oryctolagus cuniculus]
Length = 826
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 680 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 739
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 740 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQGLEMQSTKGQWFH 798
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 799 ISDTHVQAVPTTKVLNSQAYLLFYER 824
>gi|345328594|ref|XP_001505377.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Ornithorhynchus
anatinus]
Length = 974
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 6/125 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C +
Sbjct: 814 CKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLDTQVDFPIRNLCMSEFICDPAAG 873
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+LF
Sbjct: 874 PYI-YDLIAVSNHYG-AMGVGHYTAYAKNRLNGKWYYFDDSNVSLASEDQIVTKAAYVLF 931
Query: 125 FIRAN 129
+ R +
Sbjct: 932 YQRRD 936
>gi|30794162|ref|NP_083122.1| ubiquitin carboxyl-terminal hydrolase 20 [Mus musculus]
gi|81876818|sp|Q8C6M1.1|UBP20_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20; AltName:
Full=VHL-interacting deubiquitinating enzyme 2
gi|26344117|dbj|BAC35715.1| unnamed protein product [Mus musculus]
gi|50927529|gb|AAH79674.1| Ubiquitin specific peptidase 20 [Mus musculus]
gi|74201201|dbj|BAE37447.1| unnamed protein product [Mus musculus]
gi|148676553|gb|EDL08500.1| ubiquitin specific peptidase 20 [Mus musculus]
Length = 916
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L P IL + LKRF E ++ K+ ++F E L L F+ K
Sbjct: 565 CKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTS 624
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 625 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLF 683
Query: 125 FIRANQ 130
+ ++++
Sbjct: 684 YRKSSE 689
>gi|323445433|gb|EGB02043.1| hypothetical protein AURANDRAFT_35571 [Aureococcus anophagefferens]
Length = 139
Score = 68.2 bits (165), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAF--EEVLVLSSFM------ 59
SC V +K++++ PN+L+I LKRF + K+ I F + L L F+
Sbjct: 3 SCGIPVRRKKRLTLDAVPNVLIIHLKRFNALDSRKVKGKIDFPTDRPLDLGPFLSRCHGP 62
Query: 60 -CKASQDPQPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS 117
C+ DP P Y+L + H G + GHY +++++ G W+ C+D ++++ + V
Sbjct: 63 DCRPLSDPGPHLYELNAVVNHHG-DINRGHYTSFVQEG-GHWFLCDDHHIALVDVDTVKD 120
Query: 118 EKVYILFFIR 127
+ YILF++R
Sbjct: 121 SEGYILFYVR 130
>gi|23208620|gb|AAN15803.1|AF449715_1 pVHL-interacting deubiquitinating enzyme 2 [Mus musculus]
Length = 916
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L P IL + LKRF E ++ K+ ++F E L L F+ K
Sbjct: 565 CKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTS 624
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 625 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLF 683
Query: 125 FIRANQ 130
+ ++++
Sbjct: 684 YRKSSE 689
>gi|74001074|ref|XP_848330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 isoform 2
[Canis lupus familiaris]
Length = 826
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 32/147 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 680 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 739
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK------------------------DAIGRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 740 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQWFH 798
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIRA 128
+D++V +VL+ + Y+LF+ R
Sbjct: 799 ISDTHVQAVPTTKVLNSQAYLLFYERV 825
>gi|354505004|ref|XP_003514562.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Cricetulus
griseus]
gi|344258150|gb|EGW14254.1| Ubiquitin carboxyl-terminal hydrolase 20 [Cricetulus griseus]
Length = 915
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L P IL + LKRF E ++ K+ ++F E L L F+ K
Sbjct: 564 CKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTS 623
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 624 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLF 682
Query: 125 FIRANQ 130
+ ++++
Sbjct: 683 YRKSSE 688
>gi|164427066|ref|XP_959796.2| hypothetical protein NCU02375 [Neurospora crassa OR74A]
gi|157071591|gb|EAA30560.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 522
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 75/142 (52%), Gaps = 21/142 (14%)
Query: 3 DLCLFSCKKLVS---ARKQMSILQSPNILVIQLKRFEGIFG-----GKIDKAIAFEEVLV 54
D C + C+ S AR+Q SI + PN+L IQLKRFE G KI+ + F L
Sbjct: 379 DKCEYRCQNCNSVQQARRQTSIKKLPNVLSIQLKRFEFKQGRNDRAQKIETPVQFPLQLN 438
Query: 55 LSSFMCKA-SQDPQPEYK--------LFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCND 104
+ + +A +QD + Y+ L +VH G D+GHY +Y + +G +W+ ND
Sbjct: 439 MLPYTTRARTQDLKDNYELQRSCTYDLLCVVVHVG-DMDTGHYISYCR--VGDQWFAFND 495
Query: 105 SYVSVSTLQEVLSEKVYILFFI 126
V ++ +VL+ K Y+LF+I
Sbjct: 496 HKVELAQKSDVLNAKAYLLFYI 517
>gi|50510751|dbj|BAD32361.1| mKIAA1003 protein [Mus musculus]
Length = 961
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L P IL + LKRF E ++ K+ ++F E L L F+ K
Sbjct: 610 CKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTS 669
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 670 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLF 728
Query: 125 FIRANQ 130
+ ++++
Sbjct: 729 YRKSSE 734
>gi|417405449|gb|JAA49435.1| Putative ubiquitin carboxyl-terminal hydrolase 4 [Desmodus
rotundus]
Length = 963
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 16/161 (9%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P ILV+ LKRF + K+D + F L +S F+C S
Sbjct: 800 NCKKHQQATKKFDLWALPKILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPSA 859
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + R WY +DS VS+++ +++++ Y+L
Sbjct: 860 RPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNRKWYYFDDSNVSLASEDQIVTKAAYVL 917
Query: 124 FFIRANQR----------PVSANGTFASNGVKSHENGKEAY 154
F+ R + P S++G + + +EAY
Sbjct: 918 FYQRRDDEFYKPPSLTSFPGSSDGGMRPSSAQQGLGDEEAY 958
>gi|157821617|ref|NP_001101297.1| ubiquitin carboxyl-terminal hydrolase 20 [Rattus norvegicus]
gi|149039064|gb|EDL93284.1| ubiquitin specific protease 20 (predicted) [Rattus norvegicus]
Length = 915
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQD 65
CKKL + K +L P IL + LKRF E ++ K+ ++F E L L F+ K
Sbjct: 564 CKKLRNGVKYCKVLCLPEILCVHLKRFRHEVMYSFKVSSHVSFPLEGLDLRPFLAKECTS 623
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Y L I H G + SGHY AY ++ I G+WY +D YV+ V + + Y+LF
Sbjct: 624 QVTTYDLLSVICHHG-TAGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNVEAYVLF 682
Query: 125 FIRANQ 130
+ ++++
Sbjct: 683 YRKSSE 688
>gi|302819973|ref|XP_002991655.1| hypothetical protein SELMODRAFT_2432 [Selaginella moellendorffii]
gi|300140504|gb|EFJ07226.1| hypothetical protein SELMODRAFT_2432 [Selaginella moellendorffii]
Length = 321
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDKA---IAFEEVLVLSSFMCKASQDPQPEYK 71
A K++ I ++P +L + LKRF G++ K +AF+E+L LS F+ AS+D Y+
Sbjct: 204 ATKRLVIRKAPPVLTVHLKRFAQDMRGRLSKLTGHVAFDELLNLSPFL-SASRDGGL-YR 261
Query: 72 LFGTIVHSGFSPDSGHYYAYIKDAIG------RWYCCNDSYVSVSTLQEVLSEKVYILFF 125
L G + HSG + GHY A+++ WY +DS V +TL +VL + Y+LF+
Sbjct: 262 LVGVVEHSG-TMKGGHYVAFVRGGSAGDGKENFWYYISDSDVRRTTLDQVLRSEAYLLFY 320
>gi|123438389|ref|XP_001309979.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121891729|gb|EAX97049.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1803
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 14/128 (10%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKI--DKAIAFEEVLVLSSFMCKASQDP 66
C++ V A K+M I P +LV+QLKRFE G + D+ + F +L + + P
Sbjct: 1640 CREHVMANKKMDIWSCPKLLVLQLKRFETTETGSVKDDRLVKFPNILDMKDHIVG----P 1695
Query: 67 QPE---YKLFGTIVHSGFSPDSGHYYAYI----KDAIGRWYCCNDSYVSVSTLQEVLSEK 119
+P+ YKL+G H G S GH A K+ WY NDS S+ ++ LS
Sbjct: 1696 KPKSTVYKLYGVSEHFG-SLTGGHCTAKATVPQKNGQRNWYYFNDSRCERSSFEDALSPA 1754
Query: 120 VYILFFIR 127
Y+LF+ R
Sbjct: 1755 AYVLFYER 1762
>gi|195621226|gb|ACG32443.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 417
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C L A K+M I ++P ILVI LKRF+ I K +++ V L + S D
Sbjct: 273 CCSLQEAEKRMKIKKAPQILVIHLKRFKFIEQLNRHKKLSYRVVYPLELKLSSNSADADC 332
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSV---STLQEVL--------- 116
EY LF +VH G P+ GHY A IK + W +D V + STLQ
Sbjct: 333 EYSLFAVVVHLGSGPNQGHYVAMIK-SHDHWLSFDDDNVEMIPESTLQTFYGSSREYSGN 391
Query: 117 SEKVYILFFIR----ANQRPVSANG 137
++ YILF+ R N++ S++G
Sbjct: 392 TDHGYILFYGRIGGSGNEKTDSSDG 416
>gi|126335813|ref|XP_001367947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Monodelphis domestica]
Length = 965
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P +LV+ LKRF + K+D + F L +S F+C +
Sbjct: 802 NCKKHQQATKKFDLWSLPKVLVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAA 861
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 862 GPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 919
Query: 124 FFIR 127
F+ R
Sbjct: 920 FYQR 923
>gi|359322364|ref|XP_003639838.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 533
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQP 68
C + V A K +++ +L++ LK F G K+ K + + E L + + + P
Sbjct: 258 CLEKVPASKVLTLHSCAKVLILVLKGFSDFTGNKMTKEMQYPECLDMQHSLSEQRAGPL- 316
Query: 69 EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
Y L+ +VH+G+S SG Y+ ++K G+W+ +D+ VS + L + Y+LF+++
Sbjct: 317 VYVLYAVLVHAGWSCHSGRYFCFVKAGNGQWHKMDDAKVSACVVTCALRQLAYVLFYMQ 375
>gi|338720701|ref|XP_003364228.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Equus
caballus]
Length = 812
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 32/147 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 666 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 725
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAY------------------------IKDAIGRWYC 101
+ Y L+G + HSG + SGHY AY ++ G+W+
Sbjct: 726 TKVLYSLYGVVEHSG-TMRSGHYTAYAKARTANSHLSNLVLHGDIPQDFEMQSTKGQWFH 784
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIRA 128
+D++V +VL+ + Y+LF+ R
Sbjct: 785 ISDTHVQAVPTTKVLNSQAYLLFYERV 811
>gi|194752718|ref|XP_001958666.1| GF12451 [Drosophila ananassae]
gi|190619964|gb|EDV35488.1| GF12451 [Drosophila ananassae]
Length = 850
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 9/126 (7%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG----IFGGKIDKAIAFEEVLVLSSFMCKASQ 64
CKKL A + + + Q P L++ LK+F+ F K+ + +E + + ++ Q
Sbjct: 611 CKKLCDAERHIGVTQPPRNLILTLKQFKYDQKYHFRTKLMHKVFHDESVTVKVCTMESLQ 670
Query: 65 DPQP-EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLS----EK 119
+ Y L+ +VH+G+S DSGHY+ + D RWY ND+ V+ S +E+ +
Sbjct: 671 EMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQSKRWYKFNDNLVTHSQPEEMHNLTSPNT 730
Query: 120 VYILFF 125
YILF+
Sbjct: 731 PYILFY 736
>gi|348507883|ref|XP_003441485.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49 [Oreochromis
niloticus]
Length = 649
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKASQDP 66
L A KQ+ I + P +L + LKRF + G KI +AF++VL + + C S
Sbjct: 523 LSEACKQLLIYRLPQVLRLHLKRFR--WSGRNHREKIGVHVAFDQVLNIKPYCCTGSGHS 580
Query: 67 QPE----YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVY 121
Y L ++H G SGHY AY + G W CNDS + V +++EV + + Y
Sbjct: 581 VHRGGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMKVCSVEEVCNTQAY 640
Query: 122 ILFF 125
ILF+
Sbjct: 641 ILFY 644
>gi|312379746|gb|EFR25927.1| hypothetical protein AND_08313 [Anopheles darlingi]
Length = 1237
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
+CKK V+A KQ S+ + P +L +QLKRF I G KI+K + L L+ + +SQ Q
Sbjct: 476 ACKKRVAATKQFSLERVPFVLCVQLKRFT-INGTKINKHVELRSQLDLTPYSSSSSQQQQ 534
Query: 68 PE-----------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVL 116
Y+L + H G S GHY A + G ++ +DS V + V+
Sbjct: 535 QRTSGSSSAGKLTYRLTSMVTHLGTSQHCGHYTAIGQTEGGAYHVFDDSSVRPVGMHNVM 594
Query: 117 SEKVYILFFIRANQRPVSA-----NGTFASNGVKSH 147
S YILF+ P A NGT +N + H
Sbjct: 595 STNAYILFYEL--DSPAGAAVGLLNGTTKANQIAGH 628
>gi|113678342|ref|NP_001038361.1| ubiquitin carboxyl-terminal hydrolase 49 [Danio rerio]
gi|213627546|gb|AAI71546.1| Similar to Ubiquitin carboxyl-terminal hydrolase 49 (Ubiquitin
thiolesterase 49) (Ubiquitin-specific processing
protease 49) (Deubiquitinating enzyme 49) [Danio rerio]
gi|213627548|gb|AAI71548.1| Similar to Ubiquitin carboxyl-terminal hydrolase 49 (Ubiquitin
thiolesterase 49) (Ubiquitin-specific processing
protease 49) (Deubiquitinating enzyme 49) [Danio rerio]
Length = 649
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 12 LVSARKQMSILQSPNILVIQLKRFEGIFGG-----KIDKAIAFEEVLVLSSFMCKASQDP 66
L A KQ+ I + P +L + LKRF + G KI +AF++VL + + C S
Sbjct: 525 LSEACKQLLICRLPQVLRLHLKRFR--WSGRNHREKIGVHVAFDQVLNIQPY-CSCSDAA 581
Query: 67 QPE---YKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYI 122
E Y L ++H G SGHY AY + G W CNDS ++V +++EV S + YI
Sbjct: 582 AREAYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMNVCSVEEVCSTQAYI 641
Query: 123 LFF 125
LF+
Sbjct: 642 LFY 644
>gi|405970379|gb|EKC35288.1| Ubiquitin carboxyl-terminal hydrolase 19 [Crassostrea gigas]
Length = 1310
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF---EGIFGGKIDKAIAFE-EVLVLSSFMCKAS 63
SCK+ A KQMSI + P+ L+IQLKRF I+ KIDK + F L LS + +
Sbjct: 1055 SCKEHREATKQMSIWRLPHTLIIQLKRFSFRNFIWRDKIDKMVEFPVRGLDLSPYTKIGA 1114
Query: 64 QDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR--------WYCCNDSYV-SVSTLQE 114
P Y L+ + H G GHY ++++ R W C+DS V ++S +
Sbjct: 1115 DKSPPVYDLYAVVNHYG-GILGGHYTSFVRTPDARDPTKNELDWRLCDDSRVNNISGERN 1173
Query: 115 VLSEKVYILFF 125
V+S Y+LF+
Sbjct: 1174 VVSRGAYLLFY 1184
>gi|260946429|ref|XP_002617512.1| hypothetical protein CLUG_02956 [Clavispora lusitaniae ATCC 42720]
gi|238849366|gb|EEQ38830.1| hypothetical protein CLUG_02956 [Clavispora lusitaniae ATCC 42720]
Length = 515
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGIFGG----KIDKAIAFEEVLVLSSFMCKAS 63
SC++ A + + I P ++ IQLKRF+ G KI+ + L LS + +
Sbjct: 388 SCREEAQAHRALRIKALPPVISIQLKRFKHTVGSDTASKIEARVDAPLFLNLSKYASQHD 447
Query: 64 QDPQPE--YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSEKVY 121
D Y+LF + H G S +GHY A +K + GRW+ +DS +S+ + +EV + Y
Sbjct: 448 DDIDANKVYELFAVVNHVG-SVSTGHYIALVKSSGGRWFKFDDSVISLVSHEEVQATNAY 506
Query: 122 ILFFI 126
+LF+I
Sbjct: 507 LLFYI 511
>gi|311977702|ref|YP_003986822.1| probable ubiquitin carboxyl-terminal hydrolase [Acanthamoeba
polyphaga mimivirus]
gi|81175098|sp|Q5UQR3.1|UBPL1_MIMIV RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase R319;
AltName: Full=Deubiquitinating enzyme R319; AltName:
Full=Ubiquitin thioesterase R319; AltName:
Full=Ubiquitin-specific-processing protease R319
gi|55416938|gb|AAV50588.1| putative ubiquitin-specific protease [Acanthamoeba polyphaga
mimivirus]
gi|308204753|gb|ADO18554.1| probable ubiquitin carboxyl-terminal hydrolase [Acanthamoeba
polyphaga mimivirus]
gi|339061255|gb|AEJ34559.1| putative ubiquitin-specific protease [Acanthamoeba polyphaga
mimivirus]
Length = 468
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEGIFGGKIDKAIAF-EEVLVLSSFMC--KASQD 65
C + V A K+ + +P +LVIQ KRF K ++ I + + L +SS +C +
Sbjct: 340 CHEKVQAIKKTKLWTTPYVLVIQFKRFGMTRIAKDNRFINYPMDELDVSSVICSQQFEDS 399
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK-DAIGRWYCCNDSYVSVSTLQEVLSEKVYILF 124
Q +YKL I H G ++GHY+ Y K + G WY ND+Y T ++++ YILF
Sbjct: 400 VQTKYKLQCVINHHG-GLNNGHYFTYSKIENTGEWYEFNDTYTGKVTDNHIVNQNAYILF 458
Query: 125 FIRAN 129
+IR++
Sbjct: 459 YIRSD 463
>gi|296419785|ref|XP_002839472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635633|emb|CAZ83663.1| unnamed protein product [Tuber melanosporum]
Length = 524
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 21/131 (16%)
Query: 15 ARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKA-------SQD 65
A KQ+++ + P +L IQLKRFE KID I F L ++ + +A S D
Sbjct: 391 ATKQLTVKRLPPVLCIQLKRFEHGSTKSSKIDTKIRFPMQLDMAPYTTRAKRKAKDGSTD 450
Query: 66 PQPE----------YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEV 115
P+ Y L +VH+G +SGHY + ++ G+W+ +DS V+++T ++V
Sbjct: 451 CGPKSSLKGHGPYLYDLLSVVVHTG-QINSGHYINFSREN-GQWFRFDDSVVTLATEKDV 508
Query: 116 LSEKVYILFFI 126
LS K Y+LF+I
Sbjct: 509 LSAKAYLLFYI 519
>gi|367008306|ref|XP_003678653.1| hypothetical protein TDEL_0A01100 [Torulaspora delbrueckii]
gi|359746310|emb|CCE89442.1| hypothetical protein TDEL_0A01100 [Torulaspora delbrueckii]
Length = 661
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLK--RFEGIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
C + +A K+ SI+++P L+ LK RF G K+ +A+++ L L+ + C++++
Sbjct: 484 CHQTTNAVKRSSIIRAPETLLTHLKKFRFNGTASSKMKQAVSYPMFLDLTEY-CESNEKD 542
Query: 67 QP---EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYI 122
+Y+L +VH G S SGHY + K G W +D Y++ T ++VL E Y
Sbjct: 543 HVVPVKYQLTTVVVHEGRSLSSGHYIVHCKQPDGTWATYDDEYINKITERDVLKEPNAYY 602
Query: 123 LFFIR 127
L + R
Sbjct: 603 LLYTR 607
>gi|348678861|gb|EGZ18678.1| hypothetical protein PHYSODRAFT_346365 [Phytophthora sojae]
Length = 1168
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG------IFGGKIDKAIAFE-EVLVLSSFMCK 61
CK V A K+ + P +L+ LKRF + KI + F E L LS F+
Sbjct: 1039 CKDHVRAFKKFDLFSLPKVLIFHLKRFRYAQNSFYMHRDKISTLVEFPVEGLDLSEFVIG 1098
Query: 62 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKV 120
+P Y LF H G GHY A K+ + W+ NDS+ S ++ ++ +S +
Sbjct: 1099 PQNGSEPIYDLFAVSEHMG-GLGGGHYTAVAKNPVNECWFNFNDSHTSEASAEDAVSSRA 1157
Query: 121 YILFFIRANQ 130
Y+LF+IR +Q
Sbjct: 1158 YVLFYIRRDQ 1167
>gi|443731160|gb|ELU16397.1| hypothetical protein CAPTEDRAFT_138675 [Capitella teleta]
Length = 682
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 11 KLVSARKQMSILQSPNILVIQLKRFEGI---FGGKIDKAIAFEEVLVLSSFMCKASQDPQ 67
K +KQ+ + + P++L + LKRF GKI + FEE L LS F
Sbjct: 510 KYTEVQKQLLLWRLPHVLRLHLKRFMWSGRNNRGKISNHVQFEEELDLSDFCHPDLLTSS 569
Query: 68 PEYKLFGTIVHSGFSPDSGHYYAYIKD-AIGRWYCCNDSYVSVSTLQEVLSEKVYILFFI 126
P Y+L ++H G SGHY A+ + G W CND+ V+ ++ +V + YIL +
Sbjct: 570 PRYRLSAMVMHHGRGFGSGHYTAFCWNHEAGSWVHCNDAKVTRCSIDDVRKSQAYILVYT 629
Query: 127 RAN 129
R +
Sbjct: 630 RED 632
>gi|345795345|ref|XP_003434023.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16 [Canis lupus
familiaris]
Length = 811
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 32/147 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 665 TNAKKQMLISLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 724
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIK------------------------DAIGRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 725 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARAANSHLSNLVLHGDIPQDFEMQSTKGQWFH 783
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIRA 128
+D++V +VL+ + Y+LF+ R
Sbjct: 784 ISDTHVQAVPTTKVLNSQAYLLFYERV 810
>gi|224060379|ref|XP_002300170.1| predicted protein [Populus trichocarpa]
gi|222847428|gb|EEE84975.1| predicted protein [Populus trichocarpa]
Length = 925
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 15 ARKQMSILQSPNILVIQLKRFEGIFGGKIDK---AIAFEEVLVLSSFMCKASQDPQPE-Y 70
A K++ I ++P IL + LKRF G++ K + F +VL L +M D Q Y
Sbjct: 795 ATKRVLIDKAPPILTVHLKRFSQDARGRLSKLNGHVNFRDVLDLRPYMDPRCVDTQSYVY 854
Query: 71 KLFGTIVHSGFSPDSGHYYAYIK-DAIGR-----------WYCCNDSYVSVSTLQEVLSE 118
+L G + HSG + GHY AY++ DA G+ WY +D++V +L+EVL
Sbjct: 855 RLLGVVEHSG-TMRGGHYIAYVRGDARGKGRADKEQGGSVWYYASDAHVQEVSLEEVLRC 913
Query: 119 KVYILFF 125
Y+LF+
Sbjct: 914 DAYLLFY 920
>gi|348678876|gb|EGZ18693.1| hypothetical protein PHYSODRAFT_503684 [Phytophthora sojae]
Length = 1124
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFEG------IFGGKIDKAIAFE-EVLVLSSFMCK 61
CK V A K+ + P +L+ LKRF + KI + F E L LS F+
Sbjct: 995 CKDHVRAFKKFDLFSLPKVLIFHLKRFRYAQNSFYMHRDKISTLVEFPIEGLDLSEFVIG 1054
Query: 62 ASQDPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIGR-WYCCNDSYVSVSTLQEVLSEKV 120
+P Y LF H G GHY A K+ + W+ NDS+ S ++ ++ +S +
Sbjct: 1055 PQNGSEPIYDLFAVSEHMG-GLGGGHYTAVAKNPVNECWFNFNDSHTSEASAEDAVSSRA 1113
Query: 121 YILFFIRANQ 130
Y+LF+IR +Q
Sbjct: 1114 YVLFYIRRDQ 1123
>gi|406603710|emb|CCH44735.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 864
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 9 CKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQDP 66
CKK +A K +I ++P L + LKRF G K+ + +++ +L LS + +
Sbjct: 632 CKKRTNAIKISTIDRAPETLAVHLKRFRFNGSSSSKVKQGVSYPLILDLSQYTTNS---- 687
Query: 67 QPE-YKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE-KVYILF 124
+P Y+L +VH G S SGHY A+ + G W +D Y++ T ++ L + Y L
Sbjct: 688 EPVLYQLISVVVHEGRSVSSGHYIAHCRQPDGVWATYDDEYINTITEKQALKDPSAYYLI 747
Query: 125 FIRANQRPV 133
+ R + +
Sbjct: 748 YTRLTHKDI 756
>gi|354466190|ref|XP_003495557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Cricetulus griseus]
gi|344245329|gb|EGW01433.1| Ubiquitin carboxyl-terminal hydrolase 16 [Cricetulus griseus]
Length = 823
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM + +P +L + LKRF+ G K++K I F E+L L+ F CK A +
Sbjct: 677 TNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEES 736
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 737 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTPSSHLSNFVLHGDIPQDCEMESTKGQWFH 795
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V + +VL+ + Y+LF+ R
Sbjct: 796 ISDTHVQAVPVTKVLNSQAYLLFYER 821
>gi|328353160|emb|CCA39558.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Komagataella pastoris
CBS 7435]
Length = 1202
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGI--FGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CK A K + I ++P+IL I LKRFE F KID + F E L +S ++
Sbjct: 894 NCKDHRQATKTIEIWKTPDILTIHLKRFENQRSFSDKIDAVVDFPIEALDMSEYVVNPET 953
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAIG-RWYCCNDSYVSVSTLQEVLSEKVYIL 123
+ Y LF H G GHY +Y+K+ I +WY +D+ VS + ++ + Y+L
Sbjct: 954 GDEI-YDLFAVDNHFG-GLGGGHYTSYVKNHIDHKWYYFDDARVSAAEPEQAIKGSAYLL 1011
Query: 124 FFIRANQRPV 133
F+ R + P+
Sbjct: 1012 FYRRRSSTPL 1021
>gi|126335815|ref|XP_001367983.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Monodelphis domestica]
Length = 920
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRF--EGIFGGKIDKAIAFE-EVLVLSSFMCKASQ 64
+CKK A K+ + P +LV+ LKRF + K+D + F L +S F+C +
Sbjct: 757 NCKKHQQATKKFDLWSLPKVLVVHLKRFSYNRYWRDKLDTVVEFPIRDLHMSEFVCDPAA 816
Query: 65 DPQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI-GRWYCCNDSYVSVSTLQEVLSEKVYIL 123
P Y L H G + GHY AY K+ + G+WY +DS VS+++ +++++ Y+L
Sbjct: 817 GPYV-YDLIAVSNHYG-AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVL 874
Query: 124 FFIRAN 129
F+ R +
Sbjct: 875 FYQRRD 880
>gi|348562863|ref|XP_003467228.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cavia
porcellus]
Length = 824
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 32/146 (21%)
Query: 13 VSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFM---CK--ASQD 65
+A+KQM I +P +L + LKRF+ G K++K I F E+L L+ F CK A ++
Sbjct: 678 TNAKKQMLISLAPPVLTLHLKRFQQAGFSLRKVNKHIKFPEILDLAPFCTLKCKNVAEEN 737
Query: 66 PQPEYKLFGTIVHSGFSPDSGHYYAYIKDAI------------------------GRWYC 101
+ Y L+G + HSG + SGHY AY K G+W+
Sbjct: 738 TRVLYSLYGVVEHSG-TMRSGHYTAYAKARTANNHLSNLVLHGDIPQEFEMESTKGQWFH 796
Query: 102 CNDSYVSVSTLQEVLSEKVYILFFIR 127
+D++V +VL+ + Y+LF+ R
Sbjct: 797 ISDTHVQAVPTTKVLNSQAYLLFYER 822
>gi|297726595|ref|NP_001175661.1| Os08g0527600 [Oryza sativa Japonica Group]
gi|255678592|dbj|BAH94389.1| Os08g0527600 [Oryza sativa Japonica Group]
Length = 317
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Query: 25 PNILVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMCKASQD-PQPEYKLFGTIVHSGFSP 83
P +L + LKR K+ ++F+E L + FM +S+D Y+L G + H G
Sbjct: 204 PPVLALHLKRNLWPLKLKVSGHVSFKETLDVKLFMHPSSEDKDNSSYRLVGVVEHLGLCM 263
Query: 84 DSGHYYAYIKDAIGR-------WYCCNDSYVSVSTLQEVLSEKVYILFFIR 127
D+GH+ AY++ + + W+C +D+ + +L+EVL + Y+LF+ R
Sbjct: 264 DAGHFVAYVRPSCPQQTNGSSLWFCASDADIREVSLEEVLKCEAYLLFYER 314
>gi|389584168|dbj|GAB66901.1| ubiquitin carboxyl-terminal hydrolase 2 [Plasmodium cynomolgi strain
B]
Length = 1359
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFEGI---FGGKIDKAIAF----EEVLVLSSFMC 60
+CK V A K++ + + P IL++ LKRF KID + + E L +S ++
Sbjct: 1195 NCKLHVQAYKKLDLFRMPIILILHLKRFNNTNRWLRTKIDSYVYYPHKENEHLNMSPYIL 1254
Query: 61 K------ASQDPQ--PEYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTL 112
+ DP P Y+L G H+G GHY+AY+K G+WY ND++V+
Sbjct: 1255 EDGLKHMTKMDPHYSPLYELIGVNCHTG-GLCGGHYFAYVK-LNGQWYNFNDTFVTTIDE 1312
Query: 113 QEVLSEKVYILFFIRANQRPVSANGTFASNGVKSHENGKE 152
+V ++ Y+LF+ Q N TF GV N E
Sbjct: 1313 SQVNTKNAYLLFY----QLHTHKNETFT--GVAEQRNLAE 1346
>gi|225709338|gb|ACO10515.1| Ubiquitin carboxyl-terminal hydrolase 22 [Caligus rogercresseyi]
Length = 484
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Query: 8 SCKKLVSARKQMSILQSPNILVIQLKRFE--GIFGGKIDKAIAFEEVLVLSSFMCKASQD 65
+C+ + KQ+++ + P + LKRFE F KI IAF E+L +S F+ +
Sbjct: 351 NCQTYQESTKQLTMKKLPIVASFHLKRFEHSSRFHKKISTRIAFPEILDMSPFVSHIRNN 410
Query: 66 PQP-------EYKLFGTIVHSGFSPDSGHYYAYIKDAIGRWYCCNDSYVSVSTLQEVLSE 118
Y LF I H+G + ++GHY ++++ RWY CND + + L +VL
Sbjct: 411 SASPVNSGSYTYTLFAVINHTG-NIEAGHYTSFVRQHRDRWYRCNDHQIVPADLSDVLGS 469
Query: 119 KVYILFF 125
+ Y+LF+
Sbjct: 470 EGYLLFY 476
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.130 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,711,171,435
Number of Sequences: 23463169
Number of extensions: 280417149
Number of successful extensions: 620313
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1182
Number of HSP's successfully gapped in prelim test: 5050
Number of HSP's that attempted gapping in prelim test: 612523
Number of HSP's gapped (non-prelim): 7432
length of query: 433
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 288
effective length of database: 8,957,035,862
effective search space: 2579626328256
effective search space used: 2579626328256
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)