Query 013969
Match_columns 433
No_of_seqs 262 out of 2071
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 00:34:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013969.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013969hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 2.3E-45 5E-50 385.9 31.9 376 8-422 23-428 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 3E-37 6.5E-42 292.2 24.5 247 11-257 1-249 (250)
3 TIGR00890 2A0111 Oxalate/Forma 99.9 4.6E-23 9.9E-28 205.1 21.6 268 10-416 1-272 (377)
4 KOG2504 Monocarboxylate transp 99.9 2.2E-22 4.8E-27 210.1 17.2 314 7-412 40-361 (509)
5 TIGR02332 HpaX 4-hydroxyphenyl 99.8 8.7E-20 1.9E-24 186.8 19.6 181 9-196 4-194 (412)
6 PLN00028 nitrate transmembrane 99.8 1.6E-19 3.5E-24 188.3 21.9 141 11-159 34-177 (476)
7 PRK09556 uhpT sugar phosphate 99.8 3.8E-20 8.2E-25 192.4 16.2 165 27-193 44-214 (467)
8 PRK09705 cynX putative cyanate 99.8 2.9E-19 6.3E-24 181.7 21.5 131 27-164 24-155 (393)
9 PRK11663 regulatory protein Uh 99.8 2E-18 4.4E-23 177.8 22.3 133 27-166 38-172 (434)
10 PRK03545 putative arabinose tr 99.8 2.4E-18 5.3E-23 174.3 22.3 150 9-165 5-157 (390)
11 TIGR00892 2A0113 monocarboxyla 99.8 4.7E-18 1E-22 176.3 22.3 163 9-178 15-181 (455)
12 PRK11551 putative 3-hydroxyphe 99.8 4.6E-18 9.9E-23 172.8 21.3 150 6-162 8-160 (406)
13 TIGR00893 2A0114 d-galactonate 99.8 3.3E-18 7.2E-23 170.5 19.3 267 28-415 10-282 (399)
14 PRK11273 glpT sn-glycerol-3-ph 99.8 4.2E-18 9.1E-23 176.3 20.5 178 11-192 27-209 (452)
15 PRK12307 putative sialic acid 99.8 4.6E-18 1E-22 173.8 20.1 158 1-165 6-166 (426)
16 COG2271 UhpC Sugar phosphate p 99.8 1.2E-18 2.5E-23 172.9 13.3 163 28-197 45-212 (448)
17 TIGR00894 2A0114euk Na(+)-depe 99.8 1.3E-17 2.8E-22 173.0 20.1 288 6-416 12-329 (465)
18 PRK15034 nitrate/nitrite trans 99.8 1.5E-17 3.1E-22 171.3 20.0 146 12-160 33-182 (462)
19 TIGR00891 2A0112 putative sial 99.8 3.6E-17 7.8E-22 164.9 21.6 155 4-165 3-160 (405)
20 PRK03699 putative transporter; 99.8 3.9E-17 8.5E-22 165.9 21.8 151 8-165 2-155 (394)
21 TIGR00903 2A0129 major facilit 99.8 2.8E-17 6.1E-22 166.0 19.6 131 27-165 6-138 (368)
22 TIGR00881 2A0104 phosphoglycer 99.8 1.1E-17 2.3E-22 166.6 16.2 130 27-163 10-141 (379)
23 TIGR00886 2A0108 nitrite extru 99.8 5E-17 1.1E-21 162.2 21.0 127 25-159 14-144 (366)
24 PRK10213 nepI ribonucleoside t 99.8 8.4E-17 1.8E-21 163.8 22.8 152 7-165 14-168 (394)
25 COG2223 NarK Nitrate/nitrite t 99.8 2E-17 4.4E-22 164.2 17.3 272 8-416 9-286 (417)
26 TIGR00712 glpT glycerol-3-phos 99.8 8.6E-17 1.9E-21 165.8 21.7 178 11-192 25-207 (438)
27 TIGR00710 efflux_Bcr_CflA drug 99.7 1.6E-16 3.5E-21 159.4 21.3 131 28-165 21-153 (385)
28 PRK14995 methyl viologen resis 99.7 7.4E-16 1.6E-20 161.5 27.1 178 10-194 3-185 (495)
29 TIGR00895 2A0115 benzoate tran 99.7 5.4E-17 1.2E-21 162.8 17.6 181 7-194 11-195 (398)
30 PRK10091 MFS transport protein 99.7 1.8E-16 3.8E-21 160.4 21.1 130 28-164 19-150 (382)
31 TIGR00896 CynX cyanate transpo 99.7 1.1E-16 2.4E-21 159.9 18.9 129 28-164 16-145 (355)
32 TIGR00897 2A0118 polyol permea 99.7 5.8E-16 1.3E-20 157.8 21.1 125 34-161 35-161 (402)
33 TIGR00885 fucP L-fucose:H+ sym 99.7 1.2E-15 2.7E-20 156.2 22.7 138 24-165 14-154 (410)
34 TIGR00711 efflux_EmrB drug res 99.7 2E-15 4.2E-20 156.8 23.8 159 28-193 18-179 (485)
35 PRK10473 multidrug efflux syst 99.7 1.8E-15 3.9E-20 153.2 22.3 129 27-162 18-148 (392)
36 PRK10406 alpha-ketoglutarate t 99.7 2.9E-15 6.2E-20 154.2 21.4 147 9-156 18-175 (432)
37 PRK15402 multidrug efflux syst 99.7 2.3E-15 4.9E-20 153.3 19.5 150 8-164 8-160 (406)
38 COG2814 AraJ Arabinose efflux 99.7 1.1E-14 2.4E-19 145.8 23.7 266 7-416 7-278 (394)
39 PRK11102 bicyclomycin/multidru 99.7 4.2E-15 9.2E-20 149.2 19.7 131 28-165 7-139 (377)
40 PRK03893 putative sialic acid 99.7 2.3E-14 5.1E-19 149.5 25.9 168 9-183 16-186 (496)
41 PRK11043 putative transporter; 99.7 8E-15 1.7E-19 148.9 21.7 147 12-165 6-154 (401)
42 PRK10504 putative transporter; 99.7 3.6E-14 7.8E-19 147.3 26.8 148 27-181 25-175 (471)
43 PF07690 MFS_1: Major Facilita 99.7 1.1E-15 2.4E-20 150.9 14.6 131 28-165 12-145 (352)
44 TIGR00879 SP MFS transporter, 99.7 7.6E-15 1.6E-19 150.4 20.7 182 8-193 20-218 (481)
45 TIGR00900 2A0121 H+ Antiporter 99.7 6.4E-15 1.4E-19 146.0 19.0 130 34-165 21-152 (365)
46 PRK10642 proline/glycine betai 99.6 6.6E-15 1.4E-19 154.1 19.9 140 12-158 15-171 (490)
47 TIGR00887 2A0109 phosphate:H+ 99.6 2.3E-14 4.9E-19 150.5 23.0 185 11-196 14-229 (502)
48 PRK03633 putative MFS family t 99.6 1.3E-14 2.7E-19 146.8 20.1 130 28-164 22-153 (381)
49 KOG2532 Permease of the major 99.6 7.4E-15 1.6E-19 152.0 18.7 253 39-414 65-324 (466)
50 TIGR00898 2A0119 cation transp 99.6 2.4E-15 5.3E-20 157.4 15.2 159 27-195 104-267 (505)
51 PRK10133 L-fucose transporter; 99.6 2.4E-14 5.1E-19 148.0 21.8 133 27-163 41-175 (438)
52 PRK05122 major facilitator sup 99.6 4.2E-14 9.1E-19 143.4 22.2 134 32-165 36-172 (399)
53 PRK15075 citrate-proton sympor 99.6 3E-14 6.6E-19 146.7 20.8 146 7-159 9-171 (434)
54 PRK12382 putative transporter; 99.6 8.5E-14 1.8E-18 141.0 21.9 128 37-164 41-171 (392)
55 PRK10054 putative transporter; 99.6 2E-14 4.4E-19 146.3 17.4 131 28-165 24-156 (395)
56 PRK09952 shikimate transporter 99.6 5E-14 1.1E-18 145.4 20.2 146 9-162 18-182 (438)
57 PRK11646 multidrug resistance 99.6 1.5E-13 3.2E-18 140.2 22.3 157 1-165 1-159 (400)
58 PRK11652 emrD multidrug resist 99.6 1.6E-13 3.5E-18 139.0 21.9 146 12-164 7-155 (394)
59 PRK10077 xylE D-xylose transpo 99.6 7.4E-14 1.6E-18 145.0 19.3 128 30-157 30-172 (479)
60 TIGR00899 2A0120 sugar efflux 99.6 2.5E-13 5.4E-18 135.9 21.0 122 37-165 23-149 (375)
61 PRK09874 drug efflux system pr 99.6 2.6E-13 5.5E-18 137.6 20.9 130 28-165 30-166 (408)
62 TIGR00901 2A0125 AmpG-related 99.6 9.7E-14 2.1E-18 138.6 17.2 130 30-164 6-142 (356)
63 PRK15403 multidrug efflux syst 99.5 7.4E-13 1.6E-17 135.7 20.7 130 28-164 32-163 (413)
64 TIGR00883 2A0106 metabolite-pr 99.5 4E-13 8.7E-18 134.4 18.3 132 28-161 9-152 (394)
65 cd06174 MFS The Major Facilita 99.5 8.8E-13 1.9E-17 129.4 19.4 133 27-166 14-148 (352)
66 PRK10489 enterobactin exporter 99.5 4.9E-13 1.1E-17 136.7 17.3 133 31-165 36-170 (417)
67 TIGR00806 rfc RFC reduced fola 99.5 5.9E-13 1.3E-17 135.9 17.5 163 26-196 40-207 (511)
68 TIGR01299 synapt_SV2 synaptic 99.5 4.2E-13 9.2E-18 145.9 17.1 182 9-197 163-360 (742)
69 PRK09528 lacY galactoside perm 99.5 4E-13 8.8E-18 137.5 15.7 132 30-166 29-166 (420)
70 TIGR00805 oat sodium-independe 99.5 1.4E-13 3.1E-18 148.2 10.6 135 30-164 51-231 (633)
71 PRK08633 2-acyl-glycerophospho 99.4 2.7E-12 6E-17 147.2 19.6 128 33-164 31-162 (1146)
72 PRK11195 lysophospholipid tran 99.4 8.5E-12 1.8E-16 127.0 20.7 122 34-165 25-148 (393)
73 TIGR00902 2A0127 phenyl propri 99.4 8.1E-12 1.8E-16 126.4 19.7 240 34-416 26-272 (382)
74 PRK11010 ampG muropeptide tran 99.4 7.4E-12 1.6E-16 131.3 19.9 133 28-165 28-167 (491)
75 PRK15011 sugar efflux transpor 99.4 1.9E-11 4.1E-16 124.2 21.5 148 7-165 13-167 (393)
76 PRK11128 putative 3-phenylprop 99.4 1.5E-11 3.3E-16 124.4 20.2 124 33-166 25-153 (382)
77 PRK11902 ampG muropeptide tran 99.4 1.2E-11 2.6E-16 126.0 19.6 137 24-165 10-154 (402)
78 TIGR00882 2A0105 oligosacchari 99.4 2E-11 4.4E-16 123.9 19.3 124 37-164 28-156 (396)
79 PRK06814 acylglycerophosphoeth 99.4 1.9E-11 4.1E-16 140.5 20.8 123 38-166 42-169 (1140)
80 KOG1330 Sugar transporter/spin 99.4 8.3E-13 1.8E-17 132.7 7.8 139 12-157 32-173 (493)
81 COG0738 FucP Fucose permease [ 99.4 1.5E-10 3.2E-15 115.1 23.2 267 23-415 23-303 (422)
82 KOG0569 Permease of the major 99.3 1.3E-10 2.8E-15 120.0 20.1 158 36-197 43-210 (485)
83 KOG2533 Permease of the major 99.3 3.5E-11 7.6E-16 125.3 15.5 254 38-412 72-337 (495)
84 TIGR00889 2A0110 nucleoside tr 99.3 8.5E-11 1.8E-15 120.8 18.0 82 32-120 23-106 (418)
85 PRK10207 dipeptide/tripeptide 99.3 1.3E-10 2.8E-15 121.9 18.4 179 8-193 9-195 (489)
86 TIGR00792 gph sugar (Glycoside 99.3 1.6E-10 3.5E-15 118.4 17.0 124 34-158 22-153 (437)
87 TIGR00924 yjdL_sub1_fam amino 99.2 5.6E-10 1.2E-14 116.6 18.4 158 27-192 25-192 (475)
88 PRK09584 tppB putative tripept 99.2 6.8E-10 1.5E-14 116.8 17.6 155 25-185 34-194 (500)
89 PRK15462 dipeptide/tripeptide 99.1 2E-09 4.4E-14 112.3 18.2 175 11-192 7-189 (493)
90 KOG3764 Vesicular amine transp 99.1 2.4E-10 5.3E-15 113.0 10.5 152 40-198 99-254 (464)
91 TIGR00889 2A0110 nucleoside tr 99.1 2.4E-09 5.1E-14 110.1 17.3 162 33-197 229-408 (418)
92 KOG2563 Permease of the major 99.1 2E-09 4.3E-14 108.3 15.7 153 6-160 38-195 (480)
93 PRK15011 sugar efflux transpor 99.1 4.3E-09 9.3E-14 106.9 18.3 159 28-193 232-392 (393)
94 PRK10642 proline/glycine betai 99.1 6.3E-09 1.4E-13 109.0 19.8 168 26-197 264-435 (490)
95 TIGR02718 sider_RhtX_FptX side 99.1 2.2E-08 4.8E-13 101.4 21.7 75 343-417 200-277 (390)
96 PF06609 TRI12: Fungal trichot 99.0 5.9E-08 1.3E-12 102.9 23.6 156 32-197 64-223 (599)
97 KOG0254 Predicted transporter 99.0 1.9E-08 4E-13 106.2 19.7 140 48-195 90-233 (513)
98 TIGR00897 2A0118 polyol permea 99.0 1.7E-08 3.7E-13 102.8 18.8 163 26-192 236-401 (402)
99 COG2807 CynX Cyanate permease 99.0 3.7E-08 8E-13 96.9 19.9 239 26-410 26-269 (395)
100 PRK10406 alpha-ketoglutarate t 99.0 9.6E-09 2.1E-13 105.8 16.5 167 27-196 258-428 (432)
101 PRK09669 putative symporter Ya 99.0 2.2E-08 4.8E-13 103.5 19.2 120 38-158 36-163 (444)
102 TIGR00899 2A0120 sugar efflux 99.0 1.9E-08 4.1E-13 100.6 17.6 147 38-192 226-374 (375)
103 PRK11551 putative 3-hydroxyphe 99.0 1.9E-08 4E-13 102.2 17.0 157 28-191 236-395 (406)
104 PRK10489 enterobactin exporter 99.0 2.7E-08 5.9E-13 101.7 17.6 160 31-197 242-405 (417)
105 PF13347 MFS_2: MFS/sugar tran 98.9 2.3E-08 5.1E-13 102.8 16.1 123 36-158 26-157 (428)
106 PRK09528 lacY galactoside perm 98.9 1.8E-08 3.9E-13 103.1 15.1 148 42-196 257-408 (420)
107 TIGR00710 efflux_Bcr_CflA drug 98.9 6.4E-08 1.4E-12 96.9 18.7 138 28-168 222-361 (385)
108 PF00083 Sugar_tr: Sugar (and 98.9 1.1E-11 2.3E-16 127.9 -9.1 106 48-157 47-154 (451)
109 TIGR01299 synapt_SV2 synaptic 98.9 2.5E-08 5.4E-13 108.9 16.3 128 56-191 604-733 (742)
110 cd06174 MFS The Major Facilita 98.9 4.2E-08 9E-13 96.2 16.0 145 28-179 191-340 (352)
111 PRK09556 uhpT sugar phosphate 98.9 5E-08 1.1E-12 101.5 17.0 134 28-166 274-411 (467)
112 PRK03545 putative arabinose tr 98.9 6.7E-08 1.5E-12 97.9 17.3 151 37-194 231-383 (390)
113 PRK05122 major facilitator sup 98.9 5.5E-08 1.2E-12 98.6 16.6 154 33-196 237-393 (399)
114 PRK09952 shikimate transporter 98.9 1.1E-07 2.3E-12 98.3 18.9 164 27-193 265-434 (438)
115 TIGR00880 2_A_01_02 Multidrug 98.9 4.2E-08 9.2E-13 82.9 13.2 117 58-181 9-128 (141)
116 TIGR00890 2A0111 Oxalate/Forma 98.9 4.2E-08 9.2E-13 97.3 14.8 129 34-167 227-357 (377)
117 PRK15402 multidrug efflux syst 98.9 1.8E-07 3.8E-12 95.3 19.6 166 28-195 231-399 (406)
118 TIGR00902 2A0127 phenyl propri 98.8 1.4E-07 3E-12 95.5 18.1 143 30-180 223-368 (382)
119 TIGR00879 SP MFS transporter, 98.8 5.6E-08 1.2E-12 99.5 14.5 165 28-193 300-472 (481)
120 PRK11010 ampG muropeptide tran 98.8 1.3E-07 2.8E-12 99.3 17.3 156 35-194 246-405 (491)
121 PRK15034 nitrate/nitrite trans 98.8 1.3E-07 2.9E-12 97.8 16.8 167 25-194 265-458 (462)
122 TIGR00883 2A0106 metabolite-pr 98.8 5.4E-08 1.2E-12 97.2 13.6 137 26-166 233-374 (394)
123 KOG0253 Synaptic vesicle trans 98.8 1.7E-07 3.6E-12 92.3 15.4 180 8-196 73-255 (528)
124 PRK10429 melibiose:sodium symp 98.8 2.2E-07 4.7E-12 97.1 17.4 120 37-157 32-159 (473)
125 KOG0255 Synaptic vesicle trans 98.8 7.5E-08 1.6E-12 101.6 13.8 137 40-185 111-249 (521)
126 PRK03699 putative transporter; 98.8 1.5E-07 3.1E-12 95.7 15.2 150 27-183 220-372 (394)
127 PRK12382 putative transporter; 98.8 1.6E-07 3.4E-12 95.1 15.2 154 30-192 234-390 (392)
128 PRK11102 bicyclomycin/multidru 98.7 6.8E-07 1.5E-11 89.6 19.0 158 29-191 211-371 (377)
129 PRK15075 citrate-proton sympor 98.7 3.7E-07 8E-12 94.1 16.7 136 27-166 253-393 (434)
130 PRK10077 xylE D-xylose transpo 98.7 2.7E-07 5.9E-12 95.7 15.6 129 31-162 290-421 (479)
131 PRK14995 methyl viologen resis 98.7 2.4E-07 5.2E-12 97.3 14.6 134 28-165 275-411 (495)
132 PRK12307 putative sialic acid 98.7 5.7E-07 1.2E-11 91.9 16.4 136 26-166 245-382 (426)
133 PRK03633 putative MFS family t 98.7 1.2E-06 2.6E-11 88.6 18.5 124 34-167 222-347 (381)
134 TIGR00711 efflux_EmrB drug res 98.7 2.5E-07 5.3E-12 96.1 13.7 135 29-166 272-409 (485)
135 PRK03893 putative sialic acid 98.7 4.4E-07 9.5E-12 94.7 15.5 131 31-167 294-428 (496)
136 COG2814 AraJ Arabinose efflux 98.7 1.2E-06 2.6E-11 88.3 17.9 160 25-191 225-385 (394)
137 PRK09705 cynX putative cyanate 98.7 1.2E-06 2.6E-11 89.1 18.1 132 27-166 220-354 (393)
138 COG2223 NarK Nitrate/nitrite t 98.7 4.1E-07 8.9E-12 91.2 14.0 162 23-188 229-398 (417)
139 PRK11043 putative transporter; 98.7 1.8E-06 3.9E-11 87.6 19.1 138 27-166 218-356 (401)
140 PRK10504 putative transporter; 98.6 8.5E-07 1.8E-11 92.1 16.8 129 33-165 282-413 (471)
141 TIGR00891 2A0112 putative sial 98.6 3.3E-07 7.2E-12 92.2 13.4 128 33-166 259-389 (405)
142 TIGR00893 2A0114 d-galactonate 98.6 7.4E-07 1.6E-11 88.6 15.5 149 28-179 231-387 (399)
143 PRK10091 MFS transport protein 98.6 2.3E-06 5E-11 86.5 19.2 126 36-167 224-350 (382)
144 PRK11128 putative 3-phenylprop 98.6 1.6E-06 3.4E-11 87.8 17.8 128 33-167 226-355 (382)
145 PRK09848 glucuronide transport 98.6 1.3E-06 2.8E-11 90.4 17.2 119 35-153 32-158 (448)
146 TIGR01301 GPH_sucrose GPH fami 98.6 2.1E-06 4.6E-11 89.4 18.7 183 11-196 3-223 (477)
147 TIGR02718 sider_RhtX_FptX side 98.6 1.5E-06 3.3E-11 88.0 17.2 130 36-166 232-365 (390)
148 TIGR00895 2A0115 benzoate tran 98.6 6.1E-07 1.3E-11 89.8 13.8 130 27-163 265-396 (398)
149 PF05977 MFS_3: Transmembrane 98.6 3.5E-06 7.7E-11 89.0 19.9 125 38-164 36-162 (524)
150 PRK11273 glpT sn-glycerol-3-ph 98.6 1.1E-06 2.4E-11 91.0 15.8 161 26-192 267-435 (452)
151 PRK09874 drug efflux system pr 98.6 1.7E-06 3.7E-11 87.6 16.5 136 52-194 263-401 (408)
152 TIGR00900 2A0121 H+ Antiporter 98.6 7.2E-07 1.6E-11 88.2 13.2 127 33-165 232-361 (365)
153 PRK10213 nepI ribonucleoside t 98.6 3.2E-06 6.9E-11 86.1 17.7 143 35-185 240-385 (394)
154 PLN00028 nitrate transmembrane 98.6 1.1E-06 2.4E-11 91.9 14.7 160 29-196 269-437 (476)
155 TIGR00887 2A0109 phosphate:H+ 98.6 1E-06 2.2E-11 92.6 14.5 136 27-166 303-453 (502)
156 PRK11462 putative transporter; 98.5 5.5E-06 1.2E-10 86.3 19.6 120 38-158 36-163 (460)
157 PRK11663 regulatory protein Uh 98.5 2.9E-06 6.2E-11 87.5 16.8 161 29-194 260-427 (434)
158 TIGR00892 2A0113 monocarboxyla 98.5 1.8E-06 3.9E-11 89.8 14.9 130 30-166 259-394 (455)
159 TIGR00901 2A0125 AmpG-related 98.5 1.6E-06 3.6E-11 86.4 13.8 123 29-151 226-355 (356)
160 TIGR00882 2A0105 oligosacchari 98.5 2.1E-06 4.6E-11 87.1 14.8 141 43-190 250-394 (396)
161 PRK11902 ampG muropeptide tran 98.5 4.1E-06 8.8E-11 85.3 16.8 137 36-178 234-377 (402)
162 KOG0252 Inorganic phosphate tr 98.4 5.2E-07 1.1E-11 91.3 8.3 158 28-185 57-239 (538)
163 PRK08633 2-acyl-glycerophospho 98.4 3.9E-06 8.4E-11 96.7 16.6 119 37-162 258-379 (1146)
164 KOG2615 Permease of the major 98.4 7.5E-07 1.6E-11 88.2 9.0 130 26-164 42-179 (451)
165 TIGR01272 gluP glucose/galacto 98.4 4.5E-06 9.7E-11 82.4 14.4 143 15-166 142-289 (310)
166 PF03825 Nuc_H_symport: Nucleo 98.4 1.1E-05 2.4E-10 82.5 17.4 165 21-194 219-398 (400)
167 PRK11652 emrD multidrug resist 98.4 1.1E-05 2.5E-10 81.6 17.1 126 38-167 234-360 (394)
168 PF05977 MFS_3: Transmembrane 98.4 1.7E-05 3.7E-10 83.8 18.6 137 35-178 241-381 (524)
169 PRK10054 putative transporter; 98.4 1.5E-05 3.3E-10 81.2 17.2 150 41-197 238-390 (395)
170 PRK10133 L-fucose transporter; 98.4 5.7E-06 1.2E-10 85.6 14.1 120 39-167 287-407 (438)
171 PRK11195 lysophospholipid tran 98.3 1.5E-05 3.2E-10 81.2 16.4 123 38-168 232-357 (393)
172 PRK10473 multidrug efflux syst 98.3 2.6E-05 5.5E-10 78.9 18.0 118 38-164 230-350 (392)
173 TIGR00894 2A0114euk Na(+)-depe 98.3 1.1E-05 2.4E-10 83.8 15.4 137 27-167 276-422 (465)
174 TIGR00712 glpT glycerol-3-phos 98.3 8.6E-06 1.9E-10 84.0 14.0 150 27-178 266-420 (438)
175 PF05631 DUF791: Protein of un 98.3 2.4E-05 5.1E-10 77.6 16.2 86 28-126 55-141 (354)
176 TIGR00896 CynX cyanate transpo 98.3 1.4E-05 3E-10 79.7 14.4 132 26-165 211-346 (355)
177 PRK06814 acylglycerophosphoeth 98.3 9.6E-06 2.1E-10 93.6 15.0 133 34-166 247-395 (1140)
178 TIGR00898 2A0119 cation transp 98.3 1.4E-05 3.1E-10 83.7 14.9 96 62-162 371-467 (505)
179 TIGR00886 2A0108 nitrite extru 98.3 4.2E-06 9.1E-11 83.4 10.1 123 28-153 241-365 (366)
180 TIGR01272 gluP glucose/galacto 98.3 2.2E-05 4.8E-10 77.5 15.0 72 346-417 135-211 (310)
181 PF11700 ATG22: Vacuole efflux 98.3 3.4E-05 7.3E-10 80.7 16.9 140 25-165 295-440 (477)
182 PF07690 MFS_1: Major Facilita 98.2 8.5E-06 1.8E-10 80.2 11.0 127 28-158 222-352 (352)
183 KOG4686 Predicted sugar transp 98.2 2E-06 4.3E-11 82.1 5.7 117 36-156 68-187 (459)
184 TIGR00792 gph sugar (Glycoside 98.2 2.7E-05 5.9E-10 79.7 14.3 118 41-165 252-378 (437)
185 PRK11646 multidrug resistance 98.2 3.1E-05 6.8E-10 79.0 14.6 127 33-166 229-358 (400)
186 PF03825 Nuc_H_symport: Nucleo 98.2 0.00018 3.9E-09 73.6 19.5 56 36-91 26-83 (400)
187 KOG0569 Permease of the major 98.1 6.2E-05 1.3E-09 78.2 15.7 130 28-158 286-421 (485)
188 TIGR00903 2A0129 major facilit 98.1 9.9E-05 2.1E-09 74.6 17.0 143 25-178 205-352 (368)
189 TIGR00788 fbt folate/biopterin 98.1 3.6E-05 7.8E-10 80.4 14.1 166 22-194 35-211 (468)
190 COG2270 Permeases of the major 98.1 2.5E-05 5.4E-10 78.7 12.2 148 38-194 279-431 (438)
191 TIGR02332 HpaX 4-hydroxyphenyl 98.1 3.1E-05 6.7E-10 79.4 13.3 134 26-166 256-394 (412)
192 TIGR00881 2A0104 phosphoglycer 98.1 3.4E-05 7.4E-10 76.5 13.0 136 29-166 233-371 (379)
193 PF01306 LacY_symp: LacY proto 98.1 2.8E-05 6E-10 79.2 12.1 143 48-197 260-406 (412)
194 PRK09848 glucuronide transport 98.1 3.4E-05 7.4E-10 79.7 12.8 123 38-165 255-386 (448)
195 COG3104 PTR2 Dipeptide/tripept 98.1 9E-05 1.9E-09 76.2 15.3 150 38-193 48-207 (498)
196 PF11700 ATG22: Vacuole efflux 98.1 0.0004 8.6E-09 72.7 20.4 74 342-415 272-348 (477)
197 PRK15403 multidrug efflux syst 98.0 0.00052 1.1E-08 70.3 18.5 169 26-198 232-405 (413)
198 PF01306 LacY_symp: LacY proto 98.0 0.00021 4.5E-09 72.9 15.2 45 38-82 34-79 (412)
199 PF13347 MFS_2: MFS/sugar tran 97.9 0.00022 4.7E-09 73.3 15.2 151 38-194 252-424 (428)
200 KOG2325 Predicted transporter/ 97.8 0.00077 1.7E-08 69.9 16.9 155 4-165 25-188 (488)
201 PRK10207 dipeptide/tripeptide 97.8 0.00017 3.6E-09 75.8 11.7 132 61-192 324-477 (489)
202 KOG4686 Predicted sugar transp 97.7 0.00079 1.7E-08 64.7 13.9 146 10-167 265-414 (459)
203 COG2271 UhpC Sugar phosphate p 97.7 0.00039 8.4E-09 70.2 12.2 157 28-192 268-435 (448)
204 KOG2504 Monocarboxylate transp 97.7 0.00061 1.3E-08 71.8 14.0 136 26-166 312-449 (509)
205 TIGR00788 fbt folate/biopterin 97.7 0.00017 3.7E-09 75.4 9.6 126 40-165 281-411 (468)
206 PRK09584 tppB putative tripept 97.6 0.0011 2.3E-08 70.0 14.9 127 63-189 337-477 (500)
207 COG2211 MelB Na+/melibiose sym 97.6 0.0031 6.7E-08 65.3 17.0 119 38-157 39-165 (467)
208 PF03137 OATP: Organic Anion T 97.5 1.7E-05 3.6E-10 84.2 -0.3 122 33-156 24-192 (539)
209 PRK10429 melibiose:sodium symp 97.5 0.0015 3.2E-08 68.2 14.3 118 45-164 264-390 (473)
210 PRK09669 putative symporter Ya 97.5 0.0022 4.7E-08 66.3 15.2 109 52-165 269-386 (444)
211 PF03209 PUCC: PUCC protein; 97.5 0.0079 1.7E-07 60.9 17.6 156 38-193 6-181 (403)
212 TIGR00924 yjdL_sub1_fam amino 97.4 0.0023 5.1E-08 66.9 13.9 126 66-192 336-469 (475)
213 KOG0254 Predicted transporter 97.4 0.0034 7.4E-08 66.3 15.0 153 11-165 292-455 (513)
214 TIGR00885 fucP L-fucose:H+ sym 97.4 0.0042 9.1E-08 63.7 15.1 126 32-166 252-380 (410)
215 KOG0253 Synaptic vesicle trans 97.4 0.0015 3.3E-08 65.0 10.9 124 62-194 397-521 (528)
216 COG0477 ProP Permeases of the 97.3 0.0086 1.9E-07 56.0 15.3 121 33-158 23-149 (338)
217 PF03092 BT1: BT1 family; Int 97.2 0.0062 1.3E-07 63.0 13.9 158 33-193 11-177 (433)
218 KOG0252 Inorganic phosphate tr 97.1 0.0012 2.5E-08 67.5 7.4 166 13-181 304-488 (538)
219 TIGR00926 2A1704 Peptide:H+ sy 97.1 0.011 2.4E-07 64.2 15.0 130 35-164 11-147 (654)
220 COG2807 CynX Cyanate permease 97.0 0.033 7.2E-07 55.5 15.7 162 24-193 220-387 (395)
221 COG2270 Permeases of the major 97.0 0.015 3.2E-07 59.1 13.4 126 27-156 34-166 (438)
222 PF00083 Sugar_tr: Sugar (and 97.0 6.5E-06 1.4E-10 84.9 -10.9 162 29-193 270-438 (451)
223 KOG2533 Permease of the major 96.8 0.005 1.1E-07 64.6 9.0 136 25-167 286-430 (495)
224 PF05978 UNC-93: Ion channel r 96.6 0.028 6E-07 49.7 11.3 88 62-157 53-141 (156)
225 PRK11462 putative transporter; 96.6 0.091 2E-06 54.8 16.8 42 50-91 266-308 (460)
226 COG2211 MelB Na+/melibiose sym 96.6 0.036 7.8E-07 57.5 13.2 122 39-165 264-394 (467)
227 PF12832 MFS_1_like: MFS_1 lik 96.5 0.0064 1.4E-07 47.1 5.6 53 34-86 22-75 (77)
228 KOG2532 Permease of the major 96.4 0.04 8.7E-07 57.6 12.3 161 27-192 273-448 (466)
229 COG0738 FucP Fucose permease [ 96.4 0.086 1.9E-06 53.3 13.9 144 16-168 239-385 (422)
230 PF06609 TRI12: Fungal trichot 96.3 0.026 5.6E-07 60.5 10.3 148 14-166 311-466 (599)
231 PF06779 DUF1228: Protein of u 96.2 0.013 2.7E-07 46.2 5.9 68 28-95 8-76 (85)
232 KOG0255 Synaptic vesicle trans 96.2 0.11 2.3E-06 54.8 15.0 128 63-194 367-495 (521)
233 KOG3762 Predicted transporter 96.1 0.018 3.8E-07 60.1 7.7 139 39-184 398-540 (618)
234 PF03209 PUCC: PUCC protein; 96.1 0.18 3.8E-06 51.3 14.7 111 39-153 236-349 (403)
235 KOG2816 Predicted transporter 95.6 0.068 1.5E-06 55.8 9.9 123 61-193 77-201 (463)
236 KOG2816 Predicted transporter 95.5 0.079 1.7E-06 55.3 10.0 120 38-165 268-390 (463)
237 PF01770 Folate_carrier: Reduc 95.2 0.81 1.8E-05 46.8 15.6 158 32-197 24-187 (412)
238 PRK03612 spermidine synthase; 94.5 2.3 4.9E-05 45.2 17.6 153 38-193 41-199 (521)
239 KOG3764 Vesicular amine transp 94.5 0.11 2.3E-06 52.6 7.0 137 38-181 297-444 (464)
240 KOG3098 Uncharacterized conser 94.4 0.71 1.5E-05 48.0 13.2 129 29-157 258-404 (461)
241 PRK15462 dipeptide/tripeptide 94.3 0.71 1.5E-05 48.6 13.2 101 62-162 324-435 (493)
242 TIGR01301 GPH_sucrose GPH fami 94.1 1.1 2.4E-05 46.9 14.0 130 63-192 322-472 (477)
243 KOG3626 Organic anion transpor 94.0 0.79 1.7E-05 50.1 13.1 117 34-150 119-282 (735)
244 TIGR00769 AAA ADP/ATP carrier 94.0 9.4 0.0002 40.0 20.8 151 12-165 6-189 (472)
245 TIGR00805 oat sodium-independe 92.9 0.41 8.9E-06 52.1 8.8 67 25-91 343-414 (633)
246 PF06963 FPN1: Ferroportin1 (F 91.9 2.6 5.7E-05 43.6 12.7 124 28-154 274-405 (432)
247 PTZ00207 hypothetical protein; 91.6 2.7 5.9E-05 45.3 12.9 84 75-165 428-512 (591)
248 KOG3098 Uncharacterized conser 91.4 0.42 9.2E-06 49.6 6.3 90 60-157 64-154 (461)
249 KOG2615 Permease of the major 88.3 4.7 0.0001 40.9 10.6 116 39-161 289-408 (451)
250 KOG4332 Predicted sugar transp 87.6 0.46 9.9E-06 45.8 2.9 79 40-126 65-144 (454)
251 PF00854 PTR2: POT family; In 85.5 5.8 0.00013 39.8 9.9 116 77-192 2-123 (372)
252 PF02487 CLN3: CLN3 protein; 85.3 8.8 0.00019 39.3 11.0 121 63-194 76-198 (402)
253 KOG2563 Permease of the major 84.4 1.9 4.2E-05 44.4 5.7 122 24-149 278-403 (480)
254 KOG3762 Predicted transporter 82.4 1.2 2.5E-05 47.0 3.3 57 34-90 33-90 (618)
255 PF12832 MFS_1_like: MFS_1 lik 80.8 1.3 2.9E-05 34.0 2.4 48 370-417 19-68 (77)
256 COG3104 PTR2 Dipeptide/tripept 76.8 37 0.0008 35.7 12.0 87 75-161 360-450 (498)
257 KOG3574 Acetyl-CoA transporter 75.2 48 0.001 34.0 11.9 171 24-197 42-242 (510)
258 PF03092 BT1: BT1 family; Int 74.9 9 0.00019 39.6 7.2 120 44-165 252-378 (433)
259 PF02487 CLN3: CLN3 protein; 74.7 21 0.00045 36.6 9.5 110 46-160 280-390 (402)
260 PF11947 DUF3464: Protein of u 63.8 9.6 0.00021 33.5 3.9 84 68-154 56-143 (153)
261 KOG3626 Organic anion transpor 54.6 60 0.0013 35.9 8.8 63 27-89 407-474 (735)
262 PF06963 FPN1: Ferroportin1 (F 52.6 2.9E+02 0.0062 28.7 20.6 73 343-416 251-325 (432)
263 TIGR00939 2a57 Equilibrative N 52.5 1.3E+02 0.0027 31.3 10.6 49 106-158 106-154 (437)
264 KOG1237 H+/oligopeptide sympor 51.1 1.5E+02 0.0033 31.9 11.2 104 33-136 59-182 (571)
265 KOG2325 Predicted transporter/ 49.1 17 0.00036 38.3 3.4 185 12-196 261-481 (488)
266 KOG1330 Sugar transporter/spin 46.6 78 0.0017 33.1 7.7 45 28-72 264-309 (493)
267 KOG0637 Sucrose transporter an 44.0 21 0.00045 37.2 3.1 61 33-93 53-119 (498)
268 PF11299 DUF3100: Protein of u 41.2 58 0.0013 30.6 5.3 87 64-154 125-219 (241)
269 TIGR00880 2_A_01_02 Multidrug 39.8 1.4E+02 0.003 23.7 7.2 17 63-79 104-120 (141)
270 KOG1629 Bax-mediated apoptosis 31.8 1.7E+02 0.0037 26.9 6.5 73 106-190 80-153 (235)
271 TIGR00806 rfc RFC reduced fola 29.2 1.4E+02 0.003 31.6 6.4 84 58-146 310-394 (511)
272 TIGR02230 ATPase_gene1 F0F1-AT 28.8 91 0.002 25.3 4.0 27 61-87 57-84 (100)
273 PF01770 Folate_carrier: Reduc 25.7 4.8E+02 0.01 26.9 9.5 91 50-145 288-380 (412)
274 PF13000 Acatn: Acetyl-coenzym 25.5 4.5E+02 0.0097 28.1 9.2 27 169-195 199-225 (544)
275 TIGR00939 2a57 Equilibrative N 24.1 2.8E+02 0.0061 28.7 7.7 51 106-156 372-423 (437)
276 COG2076 EmrE Membrane transpor 22.8 2.5E+02 0.0055 23.1 5.5 52 65-122 19-70 (106)
277 PRK11715 inner membrane protei 21.9 8.7E+02 0.019 25.3 10.5 9 137-145 383-391 (436)
278 PF03137 OATP: Organic Anion T 21.2 32 0.00069 36.8 0.0 49 28-76 321-372 (539)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-45 Score=385.93 Aligned_cols=376 Identities=19% Similarity=0.222 Sum_probs=294.0
Q ss_pred CCCChHhHHHHHHHHHHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhccccccccccccCchHHHHHHHHHHH
Q 013969 8 SRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFPPWLVLFIGSLACF 87 (433)
Q Consensus 8 ~~~~w~~l~~~~l~~~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~ 87 (433)
..+||..++++++++.+.|..|.|+++.+++++++|+|++|++++.+.+.....+.++.|++.||+|||+++.+|.++.+
T Consensus 23 e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~ 102 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFC 102 (591)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999776654444557789999999999999999999999
Q ss_pred HHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 88 FGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 88 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
+|++++++...+... .++|.+++++++.|+|.++.++++..++.+|||++||+++|+..++.++|++++++++..++.+
T Consensus 103 iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~ 181 (591)
T PTZ00207 103 LGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD 181 (591)
T ss_pred HHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988876444331 3589999999999999999999999999999999999999999999999999999999999988
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhcccCCCCCC---C---CCCCCc-----------------chHHHHHHHHHHHHHHHH
Q 013969 168 SSSKLLLVLAVGVPAVCLVMMYFVRPCTPASG---E---DSAAPS-----------------HFLFTQAASVVLGFFLLT 224 (433)
Q Consensus 168 ~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~~~---~---~~~~~~-----------------~~~~~~~~~~~l~~~l~~ 224 (433)
+++.+++++++++.++++++..++|++|++.. + +++++. +|...+.+++++++|+++
T Consensus 182 ~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~ 261 (591)
T PTZ00207 182 NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPL 261 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHH
Confidence 88899999999999999999999999976532 1 122222 566777788899999999
Q ss_pred HHHhhccccCchhHHHHHHHHHH-HHHHhh-hhhhhhhhhhccccCcccccccCCCCCcccccCCCCCCCCCCCCCCCCC
Q 013969 225 TTILDHMIPLSASISYASLFIMI-ILLMAP-LAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSS 302 (433)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~-~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 302 (433)
+++++++++++++.+...+++++ +++..| +.+|.+. +.+++++++ .| . + ++++. ++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~-~~~~~~~~~-~~--------~---~-~~~~~-~~------- 319 (591)
T PTZ00207 262 QGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT-FDGKRPHDD-SD--------G---K-AKEHV-EA------- 319 (591)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCcCCC-cc--------c---c-ccccc-cc-------
Confidence 99999999999999999988877 667778 7788763 111111000 00 0 0 00000 00
Q ss_pred CCCCCCCCCCCChhhHHHHHhhcccccccccCCCCCCCCCcHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhh-
Q 013969 303 TTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ- 381 (433)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~- 381 (433)
+.+. .+ ++. ++. +... +.+.|+++ .|++|++++.|||++|++++|+.|+|++++||++||++++
T Consensus 320 -~~~~-~~--~~~---~~~----~~~~--~~~~P~~~--~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~ 384 (591)
T PTZ00207 320 -GEEV-SA--AED---KVV----ETDV--DYIAPQFQ--ETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALA 384 (591)
T ss_pred -cccc-cc--ccc---ccc----cccc--cCCCCCCc--chHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhc
Confidence 0000 00 000 000 0000 10225554 3999999999999999999999999999999999999999
Q ss_pred cC-Ccc--ch-hHHHHHHhHHHHhhhcccchHHHHHhhhccCcce
Q 013969 382 GV-HDT--TI-LLSLFSFCNFVGRLGGGVVSEHFVRLVQSELGNE 422 (433)
Q Consensus 382 G~-~~~--~~-~vsl~si~n~~GRl~~G~lsD~~~~~~~~~~~~~ 422 (433)
|+ ++. .. +|+++|++|++||+++|+++ .+.+|++.+.|.|
T Consensus 385 g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~p 428 (591)
T PTZ00207 385 GEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVP 428 (591)
T ss_pred CCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccc
Confidence 87 333 33 89999999999999999997 7777777665544
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=3e-37 Score=292.25 Aligned_cols=247 Identities=48% Similarity=0.864 Sum_probs=232.4
Q ss_pred ChHhHHHHHHHHHHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhccccccccccccCchHHHHHHHHHHHHHH
Q 013969 11 PWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFPPWLVLFIGSLACFFGY 90 (433)
Q Consensus 11 ~w~~l~~~~l~~~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~ 90 (433)
||..++++++++.++|+.|.|++|+|++++++|+|++|++.++++..+|..++++.|.++||+|||.++.+|+++..+||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcCChh
Q 013969 91 GVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSS 170 (433)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~ 170 (433)
.++++...+..+++++|+++++.+++|.|.++.+++++.++.|+||++||+++|+.++++|||++++++++..+++++..
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999998887656799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCC--CCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHHHHHH
Q 013969 171 KLLLVLAVGVPAVCLVMMYFVRPCTPA--SGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMII 248 (433)
Q Consensus 171 ~~l~~~a~~~~~v~l~~~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (433)
.|++++++.+.++++++.+++|+.|+. ..++++|+.++...+.+.+++++|+++.+++++++++++..+....+++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999863 234456777888888888999999999999999999999999999999999
Q ss_pred HHHhhhhhh
Q 013969 249 LLMAPLAIP 257 (433)
Q Consensus 249 ll~~~~~~~ 257 (433)
++.+|+.+|
T Consensus 241 lL~~Pl~i~ 249 (250)
T PF06813_consen 241 LLLLPLAIP 249 (250)
T ss_pred HHHhhhhcc
Confidence 999999876
No 3
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=4.6e-23 Score=205.13 Aligned_cols=268 Identities=20% Similarity=0.289 Sum_probs=194.0
Q ss_pred CChHhHHHHHHHHHHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHH
Q 013969 10 PPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFF 88 (433)
Q Consensus 10 ~~w~~l~~~~l~~~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~ 88 (433)
++|..++..+...+..+..|.++.+.|++++++|+|.++++++.+...++.. ..++.|++.||+|+|+++.++.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 3566666666666777889999999999999999999999998888888885 599999999999999999999999999
Q ss_pred HHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-
Q 013969 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN- 167 (433)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~- 167 (433)
+...+... ++++.+++.+++.|++.+..+......+.+|||++||++.++...+.++|..+.+++...+...
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVINLE 153 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcc
Confidence 88765542 3577887888889999888887888889999999999999999999999998887777665432
Q ss_pred ChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHHHHH
Q 013969 168 SSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMI 247 (433)
Q Consensus 168 ~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (433)
+|+..+.+.++++++..++..+++++
T Consensus 154 ~~~~~f~~~~~~~~~~~~~~~~~~~~------------------------------------------------------ 179 (377)
T TIGR00890 154 GVPAAFIYMGIIFLLVIVLGAFLIGY------------------------------------------------------ 179 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHheec------------------------------------------------------
Confidence 22222222222222111111111110
Q ss_pred HHHHhhhhhhhhhhhhccccCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhhccc
Q 013969 248 ILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEG 327 (433)
Q Consensus 248 ~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (433)
+++. +..+ + ++
T Consensus 180 -------------------~~~~---------------------~~~~---~-------------~~------------- 190 (377)
T TIGR00890 180 -------------------PPGQ---------------------LIKT---N-------------IE------------- 190 (377)
T ss_pred -------------------Cchh---------------------cccc---C-------------cc-------------
Confidence 0000 0000 0 00
Q ss_pred ccccccCCCCCCCCCcHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhhcCCcc--chhHHHHHHhHHHHhhhcc
Q 013969 328 AVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGG 405 (433)
Q Consensus 328 ~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~G~~~~--~~~vsl~si~n~~GRl~~G 405 (433)
. + .++.+.++.+|++++|.+.+.+++.......+.+...++.++.|.++. ....+++++.+.+|+++.|
T Consensus 191 ----~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 261 (377)
T TIGR00890 191 ----V---S--VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLG 261 (377)
T ss_pred ----c---c--hhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 011245688899999999888777666655555666777777787654 4688899999999999999
Q ss_pred cchHHHHHhhh
Q 013969 406 VVSEHFVRLVQ 416 (433)
Q Consensus 406 ~lsD~~~~~~~ 416 (433)
+++||++||..
T Consensus 262 ~l~dr~g~~~~ 272 (377)
T TIGR00890 262 ALSDKIGRQKT 272 (377)
T ss_pred HHHHHHhhhhh
Confidence 99999998754
No 4
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.2e-22 Score=210.10 Aligned_cols=314 Identities=19% Similarity=0.171 Sum_probs=221.2
Q ss_pred CCCCChHhHHHHHHHH-HHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHH
Q 013969 7 GSRPPWVGLGAAVWVQ-IAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSL 84 (433)
Q Consensus 7 ~~~~~w~~l~~~~l~~-~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~ 84 (433)
.....|.+++++++++ +..|..+.++++.+.++++++-+.+|++++.+...-... .+|+.+.+.||||.|.++++|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 3456799999999877 456999999999999999999999999998776655554 59999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHH-HHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHH
Q 013969 85 ACFFGYGVLWLAVSRTVESLPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNM 163 (433)
Q Consensus 85 l~~~g~~~~~~~~~~~~~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~ 163 (433)
+.++|+++.+++ .++|++++ ++++.|+|.|+.|.+++..+.+||+|||++|+|+..+|.|+|..+++++...
T Consensus 120 v~~~g~~lssF~-------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 120 VAALGLLLSSFA-------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred HHHHHHHHHHHH-------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 999999966653 35899888 8999999999999999999999999999999999999999999999999999
Q ss_pred HhcC-ChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHH
Q 013969 164 LLHN-SSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYAS 242 (433)
Q Consensus 164 ~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 242 (433)
+++. +|++.++..+.+. +-++.+...+|+..+......+.+.+ +
T Consensus 193 l~~~~G~r~~~l~~~~~~-l~~~~~~~~~rp~~~~~~~~~~~~~~-------------------------~--------- 237 (509)
T KOG2504|consen 193 LLSKYGWRGALLIFGGIS-LNVLVAGALLRPLSPPKKPNEEKDLR-------------------------N--------- 237 (509)
T ss_pred HHHHhCcHHHHHHHHHHH-HHHHHHHHHcCCCCcCCCchhhhhhc-------------------------c---------
Confidence 9975 6666666666655 44455556666654332211000000 0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhccccCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHH
Q 013969 243 LFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLL 322 (433)
Q Consensus 243 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (433)
+ ....+.. + .+.+....+ ++......... +++ +..
T Consensus 238 --------------~-------~~~~~~~---------~-----~~~~~~~~~---~~~~~~~~~~~---~~~---~~~- 272 (509)
T KOG2504|consen 238 --------------S-------AASVEST---------P-----KPVELRISE---RDSGLKKLSLS---NLA---TLK- 272 (509)
T ss_pred --------------c-------ccccccc---------c-----ccccccccc---CCCCCCccccc---chh---hhh-
Confidence 0 0000000 0 000000000 00000000000 000 000
Q ss_pred hhcccccccccCCCCCCCCCc--HHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhhcCCcc--chhHHHHHHhHH
Q 013969 323 AEGEGAVRRKKRRPKRGEDFK--FTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDT--TILLSLFSFCNF 398 (433)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~t--~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~G~~~~--~~~vsl~si~n~ 398 (433)
+ .+. +.+....+...+ -.+.+|++.|+.+.+...+....-......+..++++.|+++. +.+++++++.|.
T Consensus 273 -~--~~~--~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i 347 (509)
T KOG2504|consen 273 -R--GPD--KWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDI 347 (509)
T ss_pred -h--CCc--cccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhh
Confidence 0 000 000000111111 2689999999999999988888888888899999999999764 789999999999
Q ss_pred HHhhhcccchHHHH
Q 013969 399 VGRLGGGVVSEHFV 412 (433)
Q Consensus 399 ~GRl~~G~lsD~~~ 412 (433)
+||++.|++.|+..
T Consensus 348 ~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 348 IGRIILGLLADKPG 361 (509)
T ss_pred hhhhhhhhhcCccc
Confidence 99999999999987
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.84 E-value=8.7e-20 Score=186.80 Aligned_cols=181 Identities=9% Similarity=-0.041 Sum_probs=140.2
Q ss_pred CCChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHH
Q 013969 9 RPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLAC 86 (433)
Q Consensus 9 ~~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~ 86 (433)
+.+|..+...++..++.. ..+..+...|.+++++|+|.++++++.+...++.. .+++.|++.||+|||+++.++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 346776666666544433 46777888899999999999999998888888875 4899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+++..+..+. ++++.+++.+++.|++.+..+......+.+|||+ +||+++|+...+.++|.++.+++...+.
T Consensus 84 ~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 84 GIASTATMFA-------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHHHHh-------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988866542 2467888889999999988777777889999995 6999999999999999988877776654
Q ss_pred c-------CChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 013969 166 H-------NSSSKLLLVLAVGVPAVCLVMMYFVRPCTP 196 (433)
Q Consensus 166 ~-------~~~~~~l~~~a~~~~~v~l~~~~~~r~~~~ 196 (433)
+ .+|+..+.+.++..+++.++..+++|+.|+
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 3 145555555566556666666666666543
No 6
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.84 E-value=1.6e-19 Score=188.26 Aligned_cols=141 Identities=13% Similarity=0.000 Sum_probs=103.6
Q ss_pred ChHhHHHHHHHH-HHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHH
Q 013969 11 PWVGLGAAVWVQ-IAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFF 88 (433)
Q Consensus 11 ~w~~l~~~~l~~-~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~ 88 (433)
+|..+..+.+.. +.....+.++.+.|.+++++|+|.++.+++.+...++..+ .++.|++.||+|+|+++.++.++.++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~ 113 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAP 113 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 343333333333 2334467888888999999999999999987777777754 79999999999999999999988888
Q ss_pred HHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHH
Q 013969 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTE 159 (433)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~ 159 (433)
+.++..+. .+++.+++.+++.|++.+. +.+....+.+||| ++||+++|+..+...+|+.+.+.
T Consensus 114 ~~~~~~~~-------~s~~~l~~~r~l~G~~~~~-~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~ 177 (476)
T PLN00028 114 AVFCMSLV-------SSATGFIAVRFFIGFSLAT-FVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQL 177 (476)
T ss_pred HHHHHHHh-------cCHHHHHHHHHHHHHHHHh-hHHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHH
Confidence 87755442 2356666777788877764 3445566889998 56999999987666666655533
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.84 E-value=3.8e-20 Score=192.40 Aligned_cols=165 Identities=13% Similarity=0.040 Sum_probs=124.0
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
....+++..|++++++|+|.++.+++.+...++.. ..++.|++.||+|+|+++.++.++.+++.+.+....... +++
T Consensus 44 ~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--~~~ 121 (467)
T PRK09556 44 IRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSG--SVS 121 (467)
T ss_pred HhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcc--cch
Confidence 35678888999999999999999998888878875 599999999999999999999998888777665533222 235
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc----CChhHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH----NSSSKLLLVLAVGV 180 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~----~~~~~~l~~~a~~~ 180 (433)
++.+++++++.|++.+....+..+.+.+||| ++||+++|+..++.++|.++.+++...... .+|+..+.+.+++.
T Consensus 122 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~ 201 (467)
T PRK09556 122 LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIA 201 (467)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHH
Confidence 7888889999999988877788899999998 469999999998888999887666543322 13334444444444
Q ss_pred HHHHHHHHhhccc
Q 013969 181 PAVCLVMMYFVRP 193 (433)
Q Consensus 181 ~~v~l~~~~~~r~ 193 (433)
++++++..+++|+
T Consensus 202 ~~~~i~~~~~~~~ 214 (467)
T PRK09556 202 LIIGFIGLRYGSD 214 (467)
T ss_pred HHHHHHHHHhCCC
Confidence 4444444333333
No 8
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.83 E-value=2.9e-19 Score=181.68 Aligned_cols=131 Identities=12% Similarity=-0.021 Sum_probs=111.7
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..++++...|++++++|+|.+|.+++.+...++.. .+++.|++.||+|+|+++..+.++.+++.+...+. ++
T Consensus 24 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a-------~~ 96 (393)
T PRK09705 24 LLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY-------PQ 96 (393)
T ss_pred hhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC-------cc
Confidence 35789999999999999999999998888777775 59999999999999999999999999999866542 34
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
++.+.+.+++.|+|.+..+......+.+|||++|++++|+..++..+|..+.+.+...+
T Consensus 97 ~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l 155 (393)
T PRK09705 97 SALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWL 155 (393)
T ss_pred hHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777889999999998887778888999998999999998887777777766555443
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.81 E-value=2e-18 Score=177.78 Aligned_cols=133 Identities=12% Similarity=0.115 Sum_probs=111.4
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..+.++.+.|++.+++|+|..+.+++.+...++.. ..++.|++.||+|+|+++.++.++.+++.+++... ++
T Consensus 38 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 110 (434)
T PRK11663 38 TRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS-------SS 110 (434)
T ss_pred hhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH-------hH
Confidence 35677888999999999999999998887778775 59999999999999999999999999888765542 24
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
++.+++.+++.|++.|..+.+....+.+|||+ +||+++|+..++.++|+++.+++...+.+
T Consensus 111 ~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~ 172 (434)
T PRK11663 111 LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL 172 (434)
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777788888887777778899999995 69999999999999999888777766553
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.81 E-value=2.4e-18 Score=174.30 Aligned_cols=150 Identities=9% Similarity=-0.009 Sum_probs=115.6
Q ss_pred CCChHhHHHHHHHHH-HhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHH
Q 013969 9 RPPWVGLGAAVWVQI-AAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLAC 86 (433)
Q Consensus 9 ~~~w~~l~~~~l~~~-~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~ 86 (433)
.++|..+....+..+ .....|....+.|++++++|+|+++++++.+...++.. ..++.|++.||+|+|+++.++.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 345654333333332 23334555566789999999999999998777777764 5888999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+++.+..... ++++.+++.+++.|++.+..+....+.+.+++| ++||++.|+...+.++|.++.+++...+.
T Consensus 85 ~~~~~~~~~~-------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 85 IASHVLSALA-------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9888765542 347888888888888888777777888999998 57999999999999999988877665543
No 11
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.80 E-value=4.7e-18 Score=176.25 Aligned_cols=163 Identities=14% Similarity=0.081 Sum_probs=125.6
Q ss_pred CCChHhHHHHHHHHHH-hhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHH
Q 013969 9 RPPWVGLGAAVWVQIA-AGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLAC 86 (433)
Q Consensus 9 ~~~w~~l~~~~l~~~~-~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~ 86 (433)
.++|.+++++++.+.. .+..+.++.+.|++++++|+|.++.+++.+...++.. .+++.|++.||+|+|++++++.++.
T Consensus 15 ~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 15 GWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred CcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 4578888887776643 3456778999999999999999999997776666654 5899999999999999999999888
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHH-HHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 87 FFGYGVLWLAVSRTVESLPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+++.+..... .+++.+++ .+++.|++.+..+.+....+.+|||++|+++.|+..++.++|..+.+++...+.
T Consensus 95 ~~~~~~~~~~-------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~ 167 (455)
T TIGR00892 95 SLGMILASFS-------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYLF 167 (455)
T ss_pred HHHHHHHHHh-------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 8877765442 23566654 457778888766667777888999988999999999999999998888776665
Q ss_pred cC-ChhHHHHHHHH
Q 013969 166 HN-SSSKLLLVLAV 178 (433)
Q Consensus 166 ~~-~~~~~l~~~a~ 178 (433)
+. +|+..++..++
T Consensus 168 ~~~gwr~~f~~~~~ 181 (455)
T TIGR00892 168 ESFGWRGSFLILGG 181 (455)
T ss_pred HHhChHHHHHHHHH
Confidence 42 34444443333
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.80 E-value=4.6e-18 Score=172.75 Aligned_cols=150 Identities=14% Similarity=0.033 Sum_probs=122.0
Q ss_pred CCCCCChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHH
Q 013969 6 AGSRPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGS 83 (433)
Q Consensus 6 ~~~~~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~ 83 (433)
...+++|..++.+++..+..+ ..+.++...|.+.+++|+|.++.+++.+...++.. ..++.|++.||+|+|+++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 344677888777777665554 47788999999999999999999998888888875 4899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHH
Q 013969 84 LACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYN 162 (433)
Q Consensus 84 ~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~ 162 (433)
++..++.+..... .+++.+.+.+++.|++.+..+......+.+++| ++||++.|+...+..+|+.+.+.+..
T Consensus 88 ~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 160 (406)
T PRK11551 88 ALFGLFSLATAQA-------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGV 160 (406)
T ss_pred HHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877654431 246777778889999888887777888999998 56999999999988888877655543
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.79 E-value=3.3e-18 Score=170.53 Aligned_cols=267 Identities=17% Similarity=0.130 Sum_probs=183.9
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
.+.++...|.+++++|+|..+.+++.+...++.. ..++.|++.||+|+|+++.++.++.+++...+... +++
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 82 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-------GAY 82 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-------cCH
Confidence 4667778888999999999999998888888875 48999999999999999999999988888766542 247
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVC 184 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~ 184 (433)
+.+++.+++.|++.+..+.+....+.+++| ++|+++.|+.....++|..+.+++...+.+. +|+..+.+.+++..+..
T Consensus 83 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 83 VSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 788888899999998888888889999998 5699999999999999998888777665542 33333333333333333
Q ss_pred HHHHhhcccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHHHHHHHHHhhhhhhhhhhhhc
Q 013969 185 LVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICR 264 (433)
Q Consensus 185 l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~ 264 (433)
++..+++++.+++.... .
T Consensus 163 ~~~~~~~~~~~~~~~~~---~----------------------------------------------------------- 180 (399)
T TIGR00893 163 VLWLKFIPDPPQKAKWL---T----------------------------------------------------------- 180 (399)
T ss_pred HHhhheecCCCCccccC---C-----------------------------------------------------------
Confidence 22222222221110000 0
Q ss_pred cccCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhhcccccccccCCCCCCCCCcH
Q 013969 265 KRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKF 344 (433)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 344 (433)
++.+ ++..+. . .++ .+ . ++ +...+..+.
T Consensus 181 ---~~~~------------------~~~~~~---~---------~~~-~~------------~----~~--~~~~~~~~~ 208 (399)
T TIGR00893 181 ---EEEK------------------YIVVGG---L---------LAE-QQ------------G----KG--PSTPKKYQI 208 (399)
T ss_pred ---HHHH------------------hhcchh---h---------ccc-cc------------c----cc--ccCCCccch
Confidence 0000 000000 0 000 00 0 00 000112356
Q ss_pred HHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHh-hcCCcc--chhHHHHHHhHHHHhhhcccchHHHHHhh
Q 013969 345 TEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRLV 415 (433)
Q Consensus 345 ~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s-~G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~~~~ 415 (433)
++.+|++++|.+.+..++.......+......+.++ .|.+.. ....++.++++.+|+++.|+++||+++|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 209 KELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 788999999999988888777777777777777665 466543 56788899999999999999999999885
No 14
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.79 E-value=4.2e-18 Score=176.32 Aligned_cols=178 Identities=14% Similarity=0.087 Sum_probs=121.4
Q ss_pred ChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHH
Q 013969 11 PWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFF 88 (433)
Q Consensus 11 ~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~ 88 (433)
+|.++...++...... ..+.++...|.++++ |+|+.+.+++.+...++.. .+++.|++.||+|+|+++.++.++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 3554444433332222 234577788888888 9999999998887778775 599999999999999999999999988
Q ss_pred HHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh--
Q 013969 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL-- 165 (433)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~-- 165 (433)
+.+.+.+.... ..+++.+++.+++.|++.+..+.+....+.+|||+ +||+++|+...+.++|+.+.+++.....
T Consensus 106 ~~~~~~~~~~~---~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 182 (452)
T PRK11273 106 VMLFMGFVPWA---TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW 182 (452)
T ss_pred HHHHHHhhhcc---cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 88766553111 12356666677788888887777677888999985 5999999998888888777666543221
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 166 HNSSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 166 ~~~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
..+|+..+.+.+++..++.++..+++|
T Consensus 183 ~~gw~~~f~i~~~~~~~~~~l~~~~~~ 209 (452)
T PRK11273 183 FNDWHAALYMPAFAAILVALFAFAMMR 209 (452)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 223444444444433333333333343
No 15
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.79 E-value=4.6e-18 Score=173.84 Aligned_cols=158 Identities=18% Similarity=0.110 Sum_probs=126.0
Q ss_pred CccccCCCCCChHhHHHHHHHHHHhhh-hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHH
Q 013969 1 MVTLKAGSRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLV 78 (433)
Q Consensus 1 ~~~~~~~~~~~w~~l~~~~l~~~~~g~-~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~ 78 (433)
|+.+.+..+.+|..++.+.+..+..+. .+..+...|.+++++|+|..+.+++.+...++..+ +++.|++.||+|+|++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~ 85 (426)
T PRK12307 6 FPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPL 85 (426)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 445555666677766666665555544 45556677788999999999999988888888754 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHH
Q 013969 79 LFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVF 157 (433)
Q Consensus 79 ~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~ 157 (433)
+.++.++.+++.+..... .+++.+++.+++.|+|.+..+......+.+++| ++|+++.|+...+.++|..+.
T Consensus 86 l~~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~ 158 (426)
T PRK12307 86 MMWSIVAYSVGTGLSGLA-------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIA 158 (426)
T ss_pred HHHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHH
Confidence 999999999988765542 247788888999999988888888888999998 459999999999999998887
Q ss_pred HHHHHHHh
Q 013969 158 TEIYNMLL 165 (433)
Q Consensus 158 ~~l~~~~~ 165 (433)
+.+...+.
T Consensus 159 ~~l~~~l~ 166 (426)
T PRK12307 159 AYFMPSFA 166 (426)
T ss_pred HHHHHHHc
Confidence 76655444
No 16
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.78 E-value=1.2e-18 Score=172.91 Aligned_cols=163 Identities=17% Similarity=0.154 Sum_probs=141.9
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
--.|++..|.++++.++|.+|++.+.+...+...+ -.+.|.++||.+||+.+.+|.++.++..+++.+. +++
T Consensus 45 RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs-------~s~ 117 (448)
T COG2271 45 RKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS-------PSL 117 (448)
T ss_pred HHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh-------hHH
Confidence 44799999999999999999999999888887754 7999999999999999999999999988877652 356
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHH--HHHhc-CChhHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIY--NMLLH-NSSSKLLLVLAVGVPA 182 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~--~~~~~-~~~~~~l~~~a~~~~~ 182 (433)
+.+.++.++-|.-+|+...++.+++++|||++ ||+..++-++..++|+++.+++. ..+.. .+|+..+++-+++.++
T Consensus 118 ~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaii 197 (448)
T COG2271 118 FLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAII 197 (448)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHH
Confidence 77777888888888888999999999999965 99999999999999999999998 44443 4788888899999999
Q ss_pred HHHHHHhhcccCCCC
Q 013969 183 VCLVMMYFVRPCTPA 197 (433)
Q Consensus 183 v~l~~~~~~r~~~~~ 197 (433)
++++.++.+||-|++
T Consensus 198 val~~~~~~rd~Pqs 212 (448)
T COG2271 198 VALILLFLLRDRPQS 212 (448)
T ss_pred HHHHHHHHhCCCccc
Confidence 999999999887764
No 17
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.77 E-value=1.3e-17 Score=172.99 Aligned_cols=288 Identities=11% Similarity=0.018 Sum_probs=186.5
Q ss_pred CCCCCChHhHHHHHHHHHHh-hhhhhhhccHHHHHH----------------------HhCCCHHHHHHHHHHHHHHhh-
Q 013969 6 AGSRPPWVGLGAAVWVQIAA-GNAYNFPLYSHSLKS----------------------VLGFNQHQLTMLGVANDIGEN- 61 (433)
Q Consensus 6 ~~~~~~w~~l~~~~l~~~~~-g~~y~~s~~~~~l~~----------------------~~g~s~~~~~~i~~~~~~~~~- 61 (433)
...+.||.++...++....+ ...-.+++-.+.+++ +++++..+.+.+.+...++..
T Consensus 12 ~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 12 YFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQII 91 (465)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHH
Confidence 34456676655555444322 223345555555554 789999999998888888875
Q ss_pred ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCch
Q 013969 62 VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRG 140 (433)
Q Consensus 62 ~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG 140 (433)
.++++|++.||+|+|+++.++.++.+++.++...... .+++.+++.+++.|++.+..+......+.+||| ++||
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~ 166 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG-----GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERS 166 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH-----cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHH
Confidence 4999999999999999999999988887765543221 125667778999999999888888899999999 5699
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCcchHHHHHHHHHH
Q 013969 141 TVAGILKGYGGLSAAVFTEIYNMLLHN--SSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVL 218 (433)
Q Consensus 141 ~a~gi~~~~~glg~~i~~~l~~~~~~~--~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l 218 (433)
++.|+..++..+|.++.+++...+... +|+..+.+.++..++..++...+.++.|+....
T Consensus 167 ~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~------------------ 228 (465)
T TIGR00894 167 RLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC------------------ 228 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC------------------
Confidence 999999999999999888887765532 333333333332222222222222211110000
Q ss_pred HHHHHHHHHhhccccCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCcccccccCCCCCcccccCCCCCCCCCCCCC
Q 013969 219 GFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLD 298 (433)
Q Consensus 219 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (433)
T Consensus 229 -------------------------------------------------------------------------------- 228 (465)
T TIGR00894 229 -------------------------------------------------------------------------------- 228 (465)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCChhhHHHHHhhcccccccccCCCCCCCCCcHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHH
Q 013969 299 PSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIG 378 (433)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~ 378 (433)
+++.|.+...++.++ +++ +. .....+++.++++.+|.+++..++.......+...+..+.
T Consensus 229 --------------~~~~~~~~i~~~~~~----~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l 288 (465)
T TIGR00894 229 --------------ISKFEKKYINSSLQG----QKG-ST-RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFI 288 (465)
T ss_pred --------------CCHHHHHHHHhhccc----ccC-CC-CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000000 000 00 0123578999999999999888777666656666666666
Q ss_pred Hh-hcCCcc--chhHHHHHHhHHHHhhhcccchHHHHHhhh
Q 013969 379 IA-QGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRLVQ 416 (433)
Q Consensus 379 ~s-~G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~~~~~ 416 (433)
++ +|.+.. ....++..++..+++++.|+++||+.+|..
T Consensus 289 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~ 329 (465)
T TIGR00894 289 SWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKT 329 (465)
T ss_pred HHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 55 477654 467778899999999999999999986643
No 18
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.77 E-value=1.5e-17 Score=171.34 Aligned_cols=146 Identities=16% Similarity=0.112 Sum_probs=111.7
Q ss_pred hHhHHHHHHHH-HHhhhhhhhhccHHHHHH-HhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHH
Q 013969 12 WVGLGAAVWVQ-IAAGNAYNFPLYSHSLKS-VLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFF 88 (433)
Q Consensus 12 w~~l~~~~l~~-~~~g~~y~~s~~~~~l~~-~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~ 88 (433)
|+.+..+.+.. .+...-+.++...+.+.+ ++|+|++|.+++.+...++. ...++.|++.||+|+|+++.++.++.++
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 45666666644 334557888888888865 89999999999777665655 4568889999999999999999999988
Q ss_pred HHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHH
Q 013969 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEI 160 (433)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l 160 (433)
..+.+.+...+. .++++.+++.+++.|++ +..+.+..+.+.+|||+ +||+++|+..+..++|..+...+
T Consensus 113 ~~~~~~~a~~~~--~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 113 PCVWLGIAVQNP--NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHHHHHccc--CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence 887666533222 23588888899999987 56788889999999995 59999999875555666655433
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.77 E-value=3.6e-17 Score=164.87 Aligned_cols=155 Identities=17% Similarity=0.161 Sum_probs=127.9
Q ss_pred ccCCCCCChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHH
Q 013969 4 LKAGSRPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFI 81 (433)
Q Consensus 4 ~~~~~~~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~i 81 (433)
+++..+++|..+....+..+..+ ..+.++...|++++++|+|.++++++.+...++.. ..++.|++.||+|+|+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 3 YRHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred CCcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 34566788988777777665554 46778888999999999999999998877777775 59999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHH
Q 013969 82 GSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEI 160 (433)
Q Consensus 82 g~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l 160 (433)
+.++.+++.+..... ++++.+++.+++.|++.+..+......+.+++| ++|+++.|+..++.++|..+.+.+
T Consensus 83 ~~~~~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 155 (405)
T TIGR00891 83 SIVLFSAGTLACGFA-------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQV 155 (405)
T ss_pred HHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999888887765441 247788888999999988888888888999998 569999999999999999887776
Q ss_pred HHHHh
Q 013969 161 YNMLL 165 (433)
Q Consensus 161 ~~~~~ 165 (433)
...+.
T Consensus 156 ~~~l~ 160 (405)
T TIGR00891 156 YSLVV 160 (405)
T ss_pred HHHHH
Confidence 66554
No 20
>PRK03699 putative transporter; Provisional
Probab=99.77 E-value=3.9e-17 Score=165.90 Aligned_cols=151 Identities=11% Similarity=-0.007 Sum_probs=120.9
Q ss_pred CCCChHhHHHHHHHHHHh-hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHH
Q 013969 8 SRPPWVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLA 85 (433)
Q Consensus 8 ~~~~w~~l~~~~l~~~~~-g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l 85 (433)
..+||+....+.+..+.. ...+.++...|++++++|+|.++.+++.+...++..+ .++.|++.||+|+|+++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 2 NSNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 357787776776666554 4578899999999999999999999987777777754 89999999999999999999998
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 86 CFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
.+++..+.... ++++.+++.+++.|++.+..+......+.+++|+ +||++.++..+..++|+.+.+.+...+
T Consensus 82 ~~i~~~l~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 82 MILAVAGLMFS-------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHHHHc-------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887755441 2467777788888888887777777888999985 599999998888888887777665554
Q ss_pred h
Q 013969 165 L 165 (433)
Q Consensus 165 ~ 165 (433)
+
T Consensus 155 ~ 155 (394)
T PRK03699 155 L 155 (394)
T ss_pred H
Confidence 3
No 21
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.76 E-value=2.8e-17 Score=165.97 Aligned_cols=131 Identities=12% Similarity=0.024 Sum_probs=100.0
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..+.++...|++++++|+|.+|.+++.+...++.. .+++.|++.||+|||+++..+.+....+.. ... . .++
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~--~----~~~ 78 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLL--D----PFN 78 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHH--H----hcc
Confidence 45677888999999999999999998887778775 589999999999988876544443333322 111 1 124
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
++.+.+.+++.|+|.+. +.+......+||| ++|++++++...+.++|.++.+++...+.
T Consensus 79 ~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~ 138 (368)
T TIGR00903 79 YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY 138 (368)
T ss_pred HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888899999999885 4556666789998 56999999999999999988866655443
No 22
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.76 E-value=1.1e-17 Score=166.56 Aligned_cols=130 Identities=16% Similarity=0.162 Sum_probs=109.7
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
....++...|.+++++|+|..+.+++.+...++.. ..++.|++.||+|+|+++.++.++.+++.+++... ++
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 82 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-------TS 82 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-------hh
Confidence 35677778889999999999999998888878875 48999999999999999999999999888866552 24
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNM 163 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~ 163 (433)
++.+++.+++.|++.+..+......+.+++|+ +|+++.|+...+.++|..+.+++...
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 141 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLF 141 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHH
Confidence 67777888889998888888888899999995 69999999999988999888754443
No 23
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.76 E-value=5e-17 Score=162.23 Aligned_cols=127 Identities=19% Similarity=0.194 Sum_probs=101.6
Q ss_pred hhhhhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccC
Q 013969 25 AGNAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVE 102 (433)
Q Consensus 25 ~g~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~ 102 (433)
....+.++.+.|. +++++|+|..+.+++.+...++.. ..++.|++.||+|+|+++.++.++..++.+.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~------ 87 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA------ 87 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH------
Confidence 3456778888885 899999999999998888888875 59999999999999999999999999988766542
Q ss_pred ch-hHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHH
Q 013969 103 SL-PYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTE 159 (433)
Q Consensus 103 ~~-~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~ 159 (433)
+ +++.+++.+++.|++.+ .+.+....+.+|+| ++|+++.++......+|..+.+.
T Consensus 88 -~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 144 (366)
T TIGR00886 88 -VQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQF 144 (366)
T ss_pred -hhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHH
Confidence 2 46777777888888755 35567788999998 56999999987665566655433
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.76 E-value=8.4e-17 Score=163.77 Aligned_cols=152 Identities=11% Similarity=0.034 Sum_probs=120.4
Q ss_pred CCCCChHhHHHHHHHHHHh-hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHH
Q 013969 7 GSRPPWVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSL 84 (433)
Q Consensus 7 ~~~~~w~~l~~~~l~~~~~-g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~ 84 (433)
..++.|..+.......... ...|....+.|++.+++|+|+++.++..+...++.. ..++.|++.||+|||+++.++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~ 93 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAV 93 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHH
Confidence 3455777655555543333 345665557889999999999999997766666664 58999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHH
Q 013969 85 ACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNM 163 (433)
Q Consensus 85 l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~ 163 (433)
+.+++.+..... ++++.+++.+++.|++.+..+......+.+++| ++|+++.++..++.++|..+.+++...
T Consensus 94 ~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~ 166 (394)
T PRK10213 94 LLTLSCLLVSFA-------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSF 166 (394)
T ss_pred HHHHHHHHHHHH-------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999887765441 247888889999999998887778888999998 569999999999999998888777765
Q ss_pred Hh
Q 013969 164 LL 165 (433)
Q Consensus 164 ~~ 165 (433)
+.
T Consensus 167 l~ 168 (394)
T PRK10213 167 LG 168 (394)
T ss_pred HH
Confidence 54
No 25
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.76 E-value=2e-17 Score=164.25 Aligned_cols=272 Identities=19% Similarity=0.181 Sum_probs=182.4
Q ss_pred CCCChHhHHHHHHHH-HHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHH-HHHHhhccccccccccccCchHHHHHHHHH
Q 013969 8 SRPPWVGLGAAVWVQ-IAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVA-NDIGENVGLLPGLASNKFPPWLVLFIGSLA 85 (433)
Q Consensus 8 ~~~~w~~l~~~~l~~-~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~-~~~~~~~~~~~G~l~Dr~G~r~~~~ig~~l 85 (433)
++.+++.+..+++.. .+...-+.++...+.+++++|+|++|.+++... ...+...=++-|.+.||||+|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 345667777777755 344557888999999999999999999996544 444556678899999999999999999999
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 86 CFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
..+-.+.+..+.+. +++|++.+++++.|++.+ .+...+..+++|||+ ++|+|+||.-.| ++|.++...+.-.+
T Consensus 89 ~~IP~~~~~~a~~~----~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g~G-N~G~av~q~~~P~v 162 (417)
T COG2223 89 LLIPCLGLAFAVTY----PSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAGAG-NLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHccC----CchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhccc-cccHHHHHHHHHHH
Confidence 88877766664433 347888888888887654 355678889999995 599999998755 47776653222211
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHH
Q 013969 165 LHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLF 244 (433)
Q Consensus 165 ~~~~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (433)
... .. .. .|+.. ..+|+....
T Consensus 163 ~~~------------------~g----------------~~-~w~~~------~~i~~~~l~------------------ 183 (417)
T COG2223 163 AVA------------------FG----------------FL-AWRNV------AGIYVVALA------------------ 183 (417)
T ss_pred HHH------------------Hh----------------hH-HHHHH------HHHHHHHHH------------------
Confidence 100 00 00 01110 001111100
Q ss_pred HHHHHHHhhhhhhhhhhhhccccCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhh
Q 013969 245 IMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAE 324 (433)
Q Consensus 245 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (433)
+.... ..+-. + + .| +..
T Consensus 184 -----v~~v~-~~~~~---~----d------------------------~p-----------------~~r--------- 200 (417)
T COG2223 184 -----IAAVL-AWLGM---N----D------------------------VP-----------------EHR--------- 200 (417)
T ss_pred -----HHHHH-HHHHh---C----C------------------------Ch-----------------hhh---------
Confidence 00000 00000 0 0 00 000
Q ss_pred cccccccccCCCCCCCCCcHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhh-cCCcc--chhHHHHHHhHHHHh
Q 013969 325 GEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ-GVHDT--TILLSLFSFCNFVGR 401 (433)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~-G~~~~--~~~vsl~si~n~~GR 401 (433)
.+ .+ +. .+...+...++++-|.+.+.++...|.-..+.+-+..+.++. |.++. .....++...+.+-|
T Consensus 201 --~~---~~--~~--~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R 271 (417)
T COG2223 201 --AS---VK--PQ--LPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR 271 (417)
T ss_pred --cc---cc--cc--chhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH
Confidence 00 00 10 112345677899999999999999999999999999998887 77665 379999999999999
Q ss_pred hhcccchHHHHHhhh
Q 013969 402 LGGGVVSEHFVRLVQ 416 (433)
Q Consensus 402 l~~G~lsD~~~~~~~ 416 (433)
.++|++|||++.++.
T Consensus 272 p~GG~LsDR~Gg~rv 286 (417)
T COG2223 272 PLGGWLSDRIGGRRV 286 (417)
T ss_pred hccchhhhhccchhH
Confidence 999999999998876
No 26
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.75 E-value=8.6e-17 Score=165.80 Aligned_cols=178 Identities=16% Similarity=0.103 Sum_probs=121.7
Q ss_pred ChHhHHHHHHHHHHh-hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHH
Q 013969 11 PWVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFF 88 (433)
Q Consensus 11 ~w~~l~~~~l~~~~~-g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~ 88 (433)
+|..+...++..... ...+.+....|.+++ +|+|+++.+++.+...++.. ..++.|++.||+|+|+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 454444444433332 224445656677775 59999999998877777775 589999999999999999999998888
Q ss_pred HHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc-
Q 013969 89 GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH- 166 (433)
Q Consensus 89 g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~- 166 (433)
+.+.+... ... ..+++.+++.+++.|++.+..+.+....+.+||| ++||+++|+..++.++|+.+.+++......
T Consensus 104 ~~~~~~~~-~~~--~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 104 VMLLMGFV-PWA--TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHhcc-ccc--cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 87765432 111 1235666667778888888777777888899998 569999999998888998888877665442
Q ss_pred -CChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 167 -NSSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 167 -~~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
.+|+..+.+.+++.++..++..+++|
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 23444444444444433333334343
No 27
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.74 E-value=1.6e-16 Score=159.41 Aligned_cols=131 Identities=16% Similarity=0.013 Sum_probs=107.9
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
...+....|.+++++|+|.++++++.+...++.. ..++.|++.||+|+|+++.++.++.+++.+.+... +++
T Consensus 21 ~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 93 (385)
T TIGR00710 21 IDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-------NNI 93 (385)
T ss_pred HHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------ccH
Confidence 4445556788999999999999998888878775 48999999999999999999999988888765542 246
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+.+++.+++.|++.+..+.+....+.+++|+ +|+++.|+.....++|..+.+.+...+.
T Consensus 94 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 153 (385)
T TIGR00710 94 ETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL 153 (385)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777788899999888888888889999985 5999999999988899887766665443
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.74 E-value=7.4e-16 Score=161.53 Aligned_cols=178 Identities=17% Similarity=0.099 Sum_probs=134.3
Q ss_pred CChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHH
Q 013969 10 PPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACF 87 (433)
Q Consensus 10 ~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~ 87 (433)
++|..++...+..+... ...+.++..|++.+++|.+.++.+++.+...++.. +.++.|++.||+|+|+++.++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45666555555444433 35667778899999999999999998888878875 58999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcc-c-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 88 FGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNF-P-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 88 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~F-p-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
++.+..... ++++.+++.+++.|+|.+..+......+.++| | ++|+++.|+.....++|.++.+.+...+.
T Consensus 83 ~~~~~~~~a-------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 83 LASLAAAFS-------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 988865542 34788888899999998887766677788888 4 56999999999999999988888777776
Q ss_pred cC-ChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 166 HN-SSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 166 ~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
+. +|++.+.+...+.++..++..+++++.
T Consensus 156 ~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 156 EHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 64 455544444444444444444555543
No 29
>TIGR00895 2A0115 benzoate transport.
Probab=99.74 E-value=5.4e-17 Score=162.80 Aligned_cols=181 Identities=20% Similarity=0.104 Sum_probs=135.9
Q ss_pred CCCCChHhHHHHHHHHHHhhh-hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHH
Q 013969 7 GSRPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSL 84 (433)
Q Consensus 7 ~~~~~w~~l~~~~l~~~~~g~-~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~ 84 (433)
..+++|..++.+.+..+..+. .+.++.+.|.+.+++|++..+.+++.+...++.. ..++.|++.||+|+|+++.++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 90 (398)
T TIGR00895 11 LSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSIL 90 (398)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHH
Confidence 344566666666665555443 5677788899999999999999998777777775 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHH
Q 013969 85 ACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNM 163 (433)
Q Consensus 85 l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~ 163 (433)
+.+++.+++... ++++.+++.+++.|++.+..+......+.+++| ++|+++.|+...+..+|..+.+.+...
T Consensus 91 ~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 163 (398)
T TIGR00895 91 LFSVFTLLCALA-------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGW 163 (398)
T ss_pred HHHHHHHHHHHc-------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHH
Confidence 888887765441 246777778888999988888888899999999 569999999999988999888777766
Q ss_pred HhcC-ChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 164 LLHN-SSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 164 ~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
+.+. +|+..+.+.++++.+..++...++++.
T Consensus 164 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 164 LIPVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred HhhcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 6653 444444444445555555555555443
No 30
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.74 E-value=1.8e-16 Score=160.43 Aligned_cols=130 Identities=12% Similarity=0.038 Sum_probs=107.8
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
.+......|.+++++|+|.++.+++.+...++..+ .++.|++.||+|+|+++.++.++.+++.++.... +++
T Consensus 19 ~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~-------~~~ 91 (382)
T PRK10091 19 EFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS-------SSY 91 (382)
T ss_pred HHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh-------CcH
Confidence 45666688899999999999999988888888754 9999999999999999999999999988765442 347
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+.+++.+++.|++.+.........+.+++|+ +|+++.|+...+..+|..+.+++...+
T Consensus 92 ~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l 150 (382)
T PRK10091 92 LMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL 150 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH
Confidence 8888889999998887666666778899985 699999998888888888877765544
No 31
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.73 E-value=1.1e-16 Score=159.86 Aligned_cols=129 Identities=16% Similarity=0.050 Sum_probs=105.1
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
..+++.+.|++++++|+|.++.+++.+...++.. ..++.|++.||+|+|+++.++.++..++.... . .+++
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~-------~~~~ 87 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S-------APGT 87 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H-------hccH
Confidence 4567889999999999999999998888888875 59999999999999999999998887776643 1 1235
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+.+.+.+++.|+|.+.........+.++||++|+++.|+...+.++|..+.+.+...+
T Consensus 88 ~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666778888888887666666778899999999999999888888887776655443
No 32
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.71 E-value=5.8e-16 Score=157.78 Aligned_cols=125 Identities=15% Similarity=0.166 Sum_probs=94.8
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (433)
+.+++.+++|+|.++++++.+...++.. ..++.|++.||+|+|+++..+.++.+++...+... .. . ..+++.+++.
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-~~-~-~~~~~~l~~~ 111 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVF-GL-G-HANYPLILLF 111 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH-hc-c-CccHHHHHHH
Confidence 4566668899999999998887777775 59999999999999999999999988876544221 11 0 1246667777
Q ss_pred HHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHH
Q 013969 113 LCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIY 161 (433)
Q Consensus 113 ~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~ 161 (433)
+++.|+|.+....+....+.+++| ++||+++|+..++.++|..+.+++.
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887665555666778876 6799999999998888865444443
No 33
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.71 E-value=1.2e-15 Score=156.18 Aligned_cols=138 Identities=14% Similarity=0.127 Sum_probs=112.8
Q ss_pred Hhhhhh-hhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhccc
Q 013969 24 AAGNAY-NFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 24 ~~g~~y-~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
..|..+ ..+.+.|.+++++|+|..|.+++.+...++.. .+++.|++.||+|+|+++.+|.++++++...+.....
T Consensus 14 ~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~--- 90 (410)
T TIGR00885 14 LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE--- 90 (410)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh---
Confidence 345443 34578899999999999999998888888875 4899999999999999999999999999876543211
Q ss_pred CchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 102 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
..+++.+.+.+++.|+|.+...++....+.++.| ++|++..++..+.+++|+.+.+.+...++
T Consensus 91 -~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 91 -IMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred -hccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1247777778889999999988888888888888 45999999999999999988877776654
No 34
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.70 E-value=2e-15 Score=156.80 Aligned_cols=159 Identities=14% Similarity=0.082 Sum_probs=123.3
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
....+...|.+.+++|.|..+.+++.+...++.. ..++.|++.||+|+|+++.++.++..++.+.... .+++
T Consensus 18 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-------~~~~ 90 (485)
T TIGR00711 18 STIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV-------APNL 90 (485)
T ss_pred HHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC-------cCCH
Confidence 4456677888999999999999998888878875 4899999999999999999999999988875543 1347
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVC 184 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~ 184 (433)
+.+.+.+++.|++.+.........+.+++| ++||++.|+...+..+|..+.+.+...+.+. +|++.+.+.+.+.++..
T Consensus 91 ~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~ 170 (485)
T TIGR00711 91 ELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVV 170 (485)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHH
Confidence 778888899999988888788889999998 5699999999999889998887776666653 45544444444444444
Q ss_pred HHHHhhccc
Q 013969 185 LVMMYFVRP 193 (433)
Q Consensus 185 l~~~~~~r~ 193 (433)
++..+++++
T Consensus 171 ~~~~~~~~~ 179 (485)
T TIGR00711 171 VVAFFILPR 179 (485)
T ss_pred HHHHHHcCC
Confidence 444444443
No 35
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.70 E-value=1.8e-15 Score=153.22 Aligned_cols=129 Identities=12% Similarity=0.010 Sum_probs=103.7
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..+.+....|.+++++|.|..+.++..+...++.. ..++.|++.||+|+|+.+.++.++..+++..+... ++
T Consensus 18 ~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~-------~~ 90 (392)
T PRK10473 18 GIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA-------ET 90 (392)
T ss_pred HHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------Cc
Confidence 34555578899999999999999998777777775 48999999999999999999999988888765431 23
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYN 162 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~ 162 (433)
++.+++.+++.|++.+..+......+.+++| ++|+++.|+......++..+.+.+..
T Consensus 91 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~ 148 (392)
T PRK10473 91 SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGH 148 (392)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666677788888888777778888999998 56999999988877777766554443
No 36
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.68 E-value=2.9e-15 Score=154.21 Aligned_cols=147 Identities=14% Similarity=-0.064 Sum_probs=101.4
Q ss_pred CCChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhC---CCHHHHHH---HHHHHHHHhh-ccccccccccccCchHHHH
Q 013969 9 RPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLG---FNQHQLTM---LGVANDIGEN-VGLLPGLASNKFPPWLVLF 80 (433)
Q Consensus 9 ~~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g---~s~~~~~~---i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ 80 (433)
.++|..++.+.+..+... ..+.+++..|.+.++++ ++..+.+. +.....++.. .+++.|++.||+|||+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~ 97 (432)
T PRK10406 18 RRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSML 97 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 345555555544443333 35678888899999984 56665433 2333334443 4889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccc--CchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHH
Q 013969 81 IGSLACFFGYGVLWLAVSRTV--ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAV 156 (433)
Q Consensus 81 ig~~l~~~g~~~~~~~~~~~~--~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i 156 (433)
++.++++++.+..++. .+.. ...++..+.+++++.|+|.|..+....+.+.+|+| ++||++.++...+...|..+
T Consensus 98 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 98 ISVCMMCFGSLVIACL-PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 9999999988865542 1110 00113456679999999999888888999999998 56999988876665455443
No 37
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.67 E-value=2.3e-15 Score=153.29 Aligned_cols=150 Identities=11% Similarity=-0.008 Sum_probs=107.9
Q ss_pred CCCChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHH
Q 013969 8 SRPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLA 85 (433)
Q Consensus 8 ~~~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l 85 (433)
.++.|...+...+..+... ....+....|++++++|+|+.++++..+...++.. ..++.|++.||+|+|+++.++.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 3344444444433333222 23344445677899999999999997777777775 489999999999999999999988
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 86 CFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
.+++.+..... ++++.+++.+++.|++.+.........+.++||+ +|+++.++......+|..+.+++...+
T Consensus 88 ~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 160 (406)
T PRK15402 88 FILTCLAILLA-------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAAL 160 (406)
T ss_pred HHHHHHHHHHH-------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887765442 2467777788888888877666677888999985 488888887777667766665555444
No 38
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1.1e-14 Score=145.82 Aligned_cols=266 Identities=17% Similarity=0.147 Sum_probs=198.7
Q ss_pred CCCCChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHH
Q 013969 7 GSRPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSL 84 (433)
Q Consensus 7 ~~~~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~ 84 (433)
..++.|..+..-.+..++.+ ..|...-..|++.+++|.|..+++...+...++.. .+|+...+.||+.||++++...+
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 34445555555445555555 47888888999999999999999997776767764 59999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHH
Q 013969 85 ACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNM 163 (433)
Q Consensus 85 l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~ 163 (433)
++.++.++.++ +++|+.+.+.+++.|+..|..+........+.-| +||++|+|++.+|..++..+..|+...
T Consensus 87 lFi~~n~l~al-------Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 87 LFIVSNLLSAL-------APSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHH-------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 99999987665 2569999999999999999888888889999998 579999999999999999888888775
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHH
Q 013969 164 LLHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASL 243 (433)
Q Consensus 164 ~~~~~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 243 (433)
+= +-.+||..|..+..+++..+.
T Consensus 160 ig--------------------------------------~~~GWR~~F~~ia~l~ll~~~------------------- 182 (394)
T COG2814 160 LG--------------------------------------QLFGWRATFLAIAVLALLALL------------------- 182 (394)
T ss_pred HH--------------------------------------HHhhHHHHHHHHHHHHHHHHH-------------------
Confidence 53 223455544432222210000
Q ss_pred HHHHHHHHhhhhhhhhhhhhccccCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHh
Q 013969 244 FIMIILLMAPLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLA 323 (433)
Q Consensus 244 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (433)
..-..+| + ++. + +++
T Consensus 183 -------~~~~~lP-~--------~~~------------------------~-----------------~~~-------- 197 (394)
T COG2814 183 -------LLWKLLP-P--------SEI------------------------S-----------------GSL-------- 197 (394)
T ss_pred -------HHHHhCC-C--------ccC------------------------C-----------------CCC--------
Confidence 0000111 0 000 0 000
Q ss_pred hcccccccccCCCCCCCCCcHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhh-cCCcc--chhHHHHHHhHHHH
Q 013969 324 EGEGAVRRKKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ-GVHDT--TILLSLFSFCNFVG 400 (433)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~-G~~~~--~~~vsl~si~n~~G 400 (433)
+ .+-.+..+.+|+|.-|..++..++..+..-+..+-+.|+.++. |.+.. +...-+++++..+|
T Consensus 198 ------------~--~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~G 263 (394)
T COG2814 198 ------------P--GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIG 263 (394)
T ss_pred ------------C--cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHH
Confidence 0 0012346899999999999999999999999999999999998 77665 57888999999999
Q ss_pred hhhcccchHHHHHhhh
Q 013969 401 RLGGGVVSEHFVRLVQ 416 (433)
Q Consensus 401 Rl~~G~lsD~~~~~~~ 416 (433)
-++.|.++|| +.++.
T Consensus 264 n~~gGrl~dr-~~~~~ 278 (394)
T COG2814 264 NLLGGRLADR-GPRRA 278 (394)
T ss_pred HHHHhhhccc-cchhH
Confidence 9999999999 55544
No 39
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.66 E-value=4.2e-15 Score=149.23 Aligned_cols=131 Identities=15% Similarity=0.013 Sum_probs=105.7
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
...+....|.+.+++|+|.++++++.+...++.. ..++.|++.||+|||+++.++.++.+++...+... +++
T Consensus 7 ~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~ 79 (377)
T PRK11102 7 IDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTI 79 (377)
T ss_pred HHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccH
Confidence 3445567788889999999999998887777775 48999999999999999999999998888766542 236
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+.+++.+++.|++.+.........+.+++|+ +|+++.|+...+.++|..+.+.+...+.
T Consensus 80 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 139 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL 139 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777778888888887777777889999984 5999999998888888877766655443
No 40
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.66 E-value=2.3e-14 Score=149.49 Aligned_cols=168 Identities=20% Similarity=0.217 Sum_probs=127.6
Q ss_pred CCChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHH
Q 013969 9 RPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLAC 86 (433)
Q Consensus 9 ~~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~ 86 (433)
+++|..+....+..+..+ ..+..+.+.|.+++++|+|+.+.+++.+...++.. ..++.|++.||+|+|+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 455665555555444444 34566777889999999999999997777777775 4899999999999999999999999
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+++.+.+.+. .+++.+++.+++.|++.+..+......+.++|| ++|+++.|+...+.++|..+.+.+...+.
T Consensus 96 ~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 96 SVGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888766542 247777788889999888888888888999998 55999999999999999988888777766
Q ss_pred cCChhHHHHHHHHHHHHH
Q 013969 166 HNSSSKLLLVLAVGVPAV 183 (433)
Q Consensus 166 ~~~~~~~l~~~a~~~~~v 183 (433)
+...++..+.++.++.++
T Consensus 169 ~~~~w~~~f~~~~~~~~~ 186 (496)
T PRK03893 169 PVWGWRALFFIGILPIIF 186 (496)
T ss_pred ccCCHHHHHHHHHHHHHH
Confidence 643333333444444433
No 41
>PRK11043 putative transporter; Provisional
Probab=99.66 E-value=8e-15 Score=148.91 Aligned_cols=147 Identities=14% Similarity=-0.036 Sum_probs=107.3
Q ss_pred hHhHHHHHHHHHHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHH
Q 013969 12 WVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGY 90 (433)
Q Consensus 12 w~~l~~~~l~~~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~ 90 (433)
|..+..+++..+.....+.+....|++++++|+|.++++++.+...++.. ..++.|++.||+|+|+++.++.++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 34444444433333334444445567799999999999998888888875 58999999999999999999998888877
Q ss_pred HHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 91 GVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+..... ++++.+++.+++.|++.+.........+.++||+ +|+.+.+......+++.++.+.+...+.
T Consensus 86 ~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 154 (401)
T PRK11043 86 LGMLWV-------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL 154 (401)
T ss_pred HHHHHh-------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 755431 2467777778888887766655556778899985 4788888877777788877766655443
No 42
>PRK10504 putative transporter; Provisional
Probab=99.66 E-value=3.6e-14 Score=147.31 Aligned_cols=148 Identities=13% Similarity=0.016 Sum_probs=114.5
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..+.++...|.+.+++|+|..+.+++.+...++.. ..++.|++.||+|+|+++..+.++.+++.+..... ++
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 97 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS-------GT 97 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh-------CC
Confidence 35566678888999999999999997777777764 58999999999999999999988888877754331 24
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVP 181 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~ 181 (433)
++.+++.+++.|+|.+..+......+.+++|+ +|+++.|+.....++|..+.+++...+.+. +|++.+.+...+..
T Consensus 98 ~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 98 LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGI 175 (471)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHH
Confidence 67777788899999887777777888999995 599999999888889988887777766653 44444444333333
No 43
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.66 E-value=1.1e-15 Score=150.91 Aligned_cols=131 Identities=25% Similarity=0.270 Sum_probs=106.4
Q ss_pred hhhhhccHH-HHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 28 AYNFPLYSH-SLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 28 ~y~~s~~~~-~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
...+....| .+++++|+|..+++++.+...++.. ..++.|++.||+|+|+++.++.++.+++.+...+ .. +
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~--~~-----~ 84 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF--AS-----N 84 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH--HC-----C
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh--hh-----h
Confidence 334555566 6889999999999998888777775 5999999999999999999999999998444332 11 3
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
++.+++.+++.|++.+..+......+.+++|+ +|+++.|+...+.++|..+.+.+...+.
T Consensus 85 ~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 145 (352)
T PF07690_consen 85 FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI 145 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh
Confidence 56677789999999988888889999999996 7999999999999999988766666554
No 44
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.65 E-value=7.6e-15 Score=150.43 Aligned_cols=182 Identities=14% Similarity=0.057 Sum_probs=123.8
Q ss_pred CCCChHhHHHHHHHHHH---hh-hhhhhhccHHHHHHHhCCC--------HHHHHHHHHHHHHHhh-ccccccccccccC
Q 013969 8 SRPPWVGLGAAVWVQIA---AG-NAYNFPLYSHSLKSVLGFN--------QHQLTMLGVANDIGEN-VGLLPGLASNKFP 74 (433)
Q Consensus 8 ~~~~w~~l~~~~l~~~~---~g-~~y~~s~~~~~l~~~~g~s--------~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G 74 (433)
..++|.......++.+. .+ .....+...+.++.+++.+ ..+.+++.+...++.. ..++.|++.||+|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g 99 (481)
T TIGR00879 20 GSTYWKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFG 99 (481)
T ss_pred CcccHHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhh
Confidence 34456555444443322 11 1233445556667777766 8899998888878875 5999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhH
Q 013969 75 PWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLS 153 (433)
Q Consensus 75 ~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg 153 (433)
||+++.++.++..++..+.... .. ..+++.+++.+++.|+|.+..+......+.+++| ++|+++.++...+.++|
T Consensus 100 rr~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 175 (481)
T TIGR00879 100 RKKSLLIIALLFVIGAILMGLA-AF---ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFG 175 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh-cc---ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHH
Confidence 9999999999998887765432 11 1235677778999999998888888889999998 56999999999998899
Q ss_pred HHHHHHHH---HHHhcCChhHHHHHHHHHHHHHHHHHHhhccc
Q 013969 154 AAVFTEIY---NMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRP 193 (433)
Q Consensus 154 ~~i~~~l~---~~~~~~~~~~~l~~~a~~~~~v~l~~~~~~r~ 193 (433)
..+.+.+. ........+++.+.+..+..++.++..+++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~ 218 (481)
T TIGR00879 176 ILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPE 218 (481)
T ss_pred HHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88877766 21112222333333344444444444455544
No 45
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.65 E-value=6.4e-15 Score=145.99 Aligned_cols=130 Identities=12% Similarity=0.038 Sum_probs=103.4
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (433)
..|.+..+++.+..+++++.+...++.. ..++.|++.||+|||+++.++.++.+++.......... ...+++.+++.
T Consensus 21 ~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 98 (365)
T TIGR00900 21 ALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL--GGLNIWQVYVL 98 (365)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc--CCCcHHHHHHH
Confidence 3344667789999999998888888875 59999999999999999999999888877665543211 11257788888
Q ss_pred HHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 113 LCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 113 ~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+++.|++.+....+....+.+++| ++|+++.|+...+.++|..+.+.+...+.
T Consensus 99 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 99 AGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 888898888887777888999998 56999999999999999987776665544
No 46
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.65 E-value=6.6e-15 Score=154.14 Aligned_cols=140 Identities=15% Similarity=-0.012 Sum_probs=101.0
Q ss_pred hHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHH----HHHH--HHHHHHHhh-ccccccccccccCchHHHHHHH
Q 013969 12 WVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQ----LTML--GVANDIGEN-VGLLPGLASNKFPPWLVLFIGS 83 (433)
Q Consensus 12 w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~----~~~i--~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~ 83 (433)
|..++.+.+..+..+ -.+.++...|.+.++++.+.++ ++.+ .+...++.. .+++.|++.||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 444445545444443 3556777788888888643322 2222 244445554 4899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCchhHH--------HHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHH
Q 013969 84 LACFFGYGVLWLAVSRTVESLPYW--------LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSA 154 (433)
Q Consensus 84 ~l~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~ 154 (433)
++++++.++.++. ++++ .+.+++++.|+|.|..+.+....+.+||| ++||++.++...+..+|.
T Consensus 95 ~l~~i~~~~~a~~-------~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 95 VIMSISTFCIGLI-------PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHHHHhc-------ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999988876552 2233 35668999999999999999999999998 569999999887766666
Q ss_pred HHHH
Q 013969 155 AVFT 158 (433)
Q Consensus 155 ~i~~ 158 (433)
.+.+
T Consensus 168 ~lg~ 171 (490)
T PRK10642 168 VLGA 171 (490)
T ss_pred HHHH
Confidence 5544
No 47
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.64 E-value=2.3e-14 Score=150.49 Aligned_cols=185 Identities=10% Similarity=-0.038 Sum_probs=124.5
Q ss_pred ChHhHHHHHHHHHHhhh-hhhhhccHHHHHHHh-----CCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHH
Q 013969 11 PWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVL-----GFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGS 83 (433)
Q Consensus 11 ~w~~l~~~~l~~~~~g~-~y~~s~~~~~l~~~~-----g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~ 83 (433)
++.++..+.+..+..+. ....+...|.+.+++ ..+..+.+++.+...++.. ..++.|++.||+|||+++.++.
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 33344333333344443 334455556666543 3455566777777778875 4899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHH
Q 013969 84 LACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYN 162 (433)
Q Consensus 84 ~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~ 162 (433)
++..++.++..... +..+..+++.+++.+++.|++.|..+......+.+++| ++||+++++......+|..+.+.+..
T Consensus 94 ~~~~v~~~~~~~~~-~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASGLSP-GSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHcc-CcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888877655421 11011125677789999999999888888999999999 55999999998888888766655443
Q ss_pred HHhc-----------------------CChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 013969 163 MLLH-----------------------NSSSKLLLVLAVGVPAVCLVMMYFVRPCTP 196 (433)
Q Consensus 163 ~~~~-----------------------~~~~~~l~~~a~~~~~v~l~~~~~~r~~~~ 196 (433)
.+.. +..|+++++++.++.++.++..+++++.|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPR 229 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 2211 113555666666676666666666655544
No 48
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.64 E-value=1.3e-14 Score=146.75 Aligned_cols=130 Identities=15% Similarity=0.026 Sum_probs=105.3
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
......+.|.+++++|+|.++++++.+...++.. ..++.|++.||+|+|+++.++.++.++++...... +++
T Consensus 22 ~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~~ 94 (381)
T PRK03633 22 IAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM-------VGF 94 (381)
T ss_pred hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccH
Confidence 4455667888999999999999998888888875 49999999999999999999999999888765431 247
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+.+.+.+++.|++.+.........+.++.| ++||++.|+...+..+|.++.+.+...+
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 95 WSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 777788899999888766655566667776 6799999999888889988876665544
No 49
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.64 E-value=7.4e-15 Score=152.01 Aligned_cols=253 Identities=15% Similarity=0.145 Sum_probs=190.8
Q ss_pred HHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHH
Q 013969 39 KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVAT 117 (433)
Q Consensus 39 ~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 117 (433)
+.+++||++|-+++.+....|... .+++|+++||+|.|+++..+.++.+++.++.-.+... +++.+++.+++.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~-----~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI-----GFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh-----cchhhHHHHHHhH
Confidence 457999999999988888899865 8999999999999999999999999988877664322 3566777999999
Q ss_pred hchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 118 NSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN--SSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 118 ~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~--~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
++.|..+++.-....+|+| ++|++..+++.++..+|.++..|+...+.+. +|...+++.|+++++..++..++.+|.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999888899999999 5699999999999999999888888877754 566666677777777766666666665
Q ss_pred CCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccccCcccccc
Q 013969 195 TPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTSESGILD 274 (433)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 274 (433)
|.+... .+..|.
T Consensus 220 P~~h~~---------------------------------is~~El----------------------------------- 231 (466)
T KOG2532|consen 220 PSKHPN---------------------------------ISEKEL----------------------------------- 231 (466)
T ss_pred cccCCC---------------------------------CCHHHH-----------------------------------
Confidence 442110 000000
Q ss_pred cCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhhcccccccccCCCCCCCCCcHHHHhhhhhHH
Q 013969 275 QSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAVVKADFW 354 (433)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fw 354 (433)
+.. +++... ++ .+++++.+.+++++++.+|
T Consensus 232 --------------------------------------------~~I-~~~k~~---~~--~~~~~~vP~~~i~ts~~vw 261 (466)
T KOG2532|consen 232 --------------------------------------------KYI-EKGKSE---AH--VKKKPPVPYKAILTSPPVW 261 (466)
T ss_pred --------------------------------------------HHH-Hhcccc---cc--cCCCCCCCHHHHHcCHHHH
Confidence 000 000000 00 0001346789999999999
Q ss_pred HHHHHHHhhcccceeeecchhhHHHh-hcCCcc--chhHHHHHHhHHHHhhhcccchHHHHHh
Q 013969 355 LLFLVYFAGVGSGVTVLNNLAQIGIA-QGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRL 414 (433)
Q Consensus 355 ll~~~~~~~~g~g~~~i~n~~~i~~s-~G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~~~ 414 (433)
.+|++.++..-.-..++..+....++ ++++-. ..+.++=-+.+.+-+++.|.++|++.+|
T Consensus 262 ai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~ 324 (466)
T KOG2532|consen 262 AIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999988877666666666666665 477643 5678888999999999999999999886
No 50
>TIGR00898 2A0119 cation transport protein.
Probab=99.64 E-value=2.4e-15 Score=157.43 Aligned_cols=159 Identities=13% Similarity=0.181 Sum_probs=120.6
Q ss_pred hhhhhhccHHHHHHHhCCC---HHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccC
Q 013969 27 NAYNFPLYSHSLKSVLGFN---QHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVE 102 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s---~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~ 102 (433)
..|.++.+.+.++++++++ +.+.++..+...++..+ .++.|++.||+|||+++.++.++.+++.++..+
T Consensus 104 ~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~------- 176 (505)
T TIGR00898 104 WEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAF------- 176 (505)
T ss_pred cEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHH-------
Confidence 4566667888899999999 89999988888888865 899999999999999999999988888775543
Q ss_pred chhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHH
Q 013969 103 SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVP 181 (433)
Q Consensus 103 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~ 181 (433)
.++++.+++++++.|++.+..+......+.+++|+ +|+.+.++...++++|.++.+. ...++.+ |+..+...++ +.
T Consensus 177 ~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~-~~~~~~~-wr~~~~~~~i-~~ 253 (505)
T TIGR00898 177 SPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPL-VAYFIPD-WRWLQLAVSL-PT 253 (505)
T ss_pred cccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHH-HHHHhhH-HHHHHHHHHH-HH
Confidence 13578888889999999998888888999999985 5999999988888788765544 4444433 5544444444 44
Q ss_pred HHHHHHHhhcccCC
Q 013969 182 AVCLVMMYFVRPCT 195 (433)
Q Consensus 182 ~v~l~~~~~~r~~~ 195 (433)
++.++..+++++.|
T Consensus 254 ~~~~~~~~~~~esp 267 (505)
T TIGR00898 254 FLFFLLSWFVPESP 267 (505)
T ss_pred HHHHHHHHhcCCCh
Confidence 44444445555433
No 51
>PRK10133 L-fucose transporter; Provisional
Probab=99.63 E-value=2.4e-14 Score=147.97 Aligned_cols=133 Identities=14% Similarity=0.123 Sum_probs=107.9
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
.....+.+.|.+++++|+|.++.++..+...++.. .+++.|++.||+|+|+++.++.++++++.+++..... +++
T Consensus 41 ~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~----a~~ 116 (438)
T PRK10133 41 ANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE----IMN 116 (438)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh----cCC
Confidence 35667778899999999999999998888888875 4999999999999999999999999999876532111 235
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNM 163 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~ 163 (433)
++.+++.+++.|+|.+....+....+.++.|++ |...+++..+.+++|..+.+.+...
T Consensus 117 ~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 117 YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888999999999988888888888887755 5567889888888888877655443
No 52
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.63 E-value=4.2e-14 Score=143.45 Aligned_cols=134 Identities=14% Similarity=0.084 Sum_probs=100.2
Q ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHH
Q 013969 32 PLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAV-SRTVESLPYWLL 109 (433)
Q Consensus 32 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~-~~~~~~~~~~~l 109 (433)
.++...+++++|+|..+++++.+...++.. .+++.|++.||+|||+++.++.++.+++........ .+.....+++.+
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 333334788999999999998888888875 599999999999999999999998877655443321 111111235567
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 110 WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 110 ~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
++.+++.|+|.+..+......+.+++| ++|+++.|+...+..+|..+.+++...+.
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~ 172 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY 172 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 778899999998877777777889987 66999999987777777766666655443
No 53
>PRK15075 citrate-proton symporter; Provisional
Probab=99.62 E-value=3e-14 Score=146.69 Aligned_cols=146 Identities=8% Similarity=-0.045 Sum_probs=105.5
Q ss_pred CCCCChHhHHHHHHHHHHhh-hhhhhhccHHHHHHHhCCCHHHHHH-HHHHHHHHh------hccccccccccccCchHH
Q 013969 7 GSRPPWVGLGAAVWVQIAAG-NAYNFPLYSHSLKSVLGFNQHQLTM-LGVANDIGE------NVGLLPGLASNKFPPWLV 78 (433)
Q Consensus 7 ~~~~~w~~l~~~~l~~~~~g-~~y~~s~~~~~l~~~~g~s~~~~~~-i~~~~~~~~------~~~~~~G~l~Dr~G~r~~ 78 (433)
.+..||+.....++..+... ....++.+.|.++++++.+..+.+. ..+...++. ..+++.|++.||+|||++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 88 (434)
T PRK15075 9 SRESKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG 88 (434)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH
Confidence 34456665555555554444 3667889999999999998887654 333222221 236788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCchhHH--------HHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhh
Q 013969 79 LFIGSLACFFGYGVLWLAVSRTVESLPYW--------LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGY 149 (433)
Q Consensus 79 ~~ig~~l~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~ 149 (433)
++++.++.+++..+..+. ++++ .+++.+++.|++.+..+......+.+|+| ++||+++++...+
T Consensus 89 l~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~ 161 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFV-------PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSAS 161 (434)
T ss_pred HHHHHHHHHHHHHHHHhC-------CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHH
Confidence 999999998888765542 1233 34568899999988877777888999998 5699999998887
Q ss_pred hhhHHHHHHH
Q 013969 150 GGLSAAVFTE 159 (433)
Q Consensus 150 ~glg~~i~~~ 159 (433)
..+|..+.+.
T Consensus 162 ~~~g~~~g~~ 171 (434)
T PRK15075 162 QQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHH
Confidence 7777655443
No 54
>PRK12382 putative transporter; Provisional
Probab=99.60 E-value=8.5e-14 Score=140.96 Aligned_cols=128 Identities=15% Similarity=0.024 Sum_probs=97.2
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHH
Q 013969 37 SLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAV-SRTVESLPYWLLWIALC 114 (433)
Q Consensus 37 ~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~ 114 (433)
.+++++|+|.++++++.+...++.. .+++.|++.||+|+|+++.++.+...++...+.... .......+++.+++.++
T Consensus 41 ~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 41 FVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRL 120 (392)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Confidence 4688999999999998888878875 599999999999999999999887776544322211 01001134677778899
Q ss_pred HHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 115 VATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 115 l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+.|+|.+..+.+....+.+++| ++|++++|+...+..+|.++.+++...+
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l 171 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL 171 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999988777777778889998 6699999998887777777766655443
No 55
>PRK10054 putative transporter; Provisional
Probab=99.60 E-value=2e-14 Score=146.32 Aligned_cols=131 Identities=11% Similarity=0.042 Sum_probs=96.4
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
...++.+.+.+++++|+|..+++++.+...+... ..++.|++.||+|+|+++.++.++.+++++.+.+. +++
T Consensus 24 ~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~~ 96 (395)
T PRK10054 24 GATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV-------NNV 96 (395)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-------hHH
Confidence 3344445556788999999999998777666664 58999999999999999999999888887765442 235
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+.+++..++.|.+.+...........+.+| ++|+++.|+.....++|.++.+++...+.
T Consensus 97 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 97 TLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555555555545444444555677777 56999999999988899888876665443
No 56
>PRK09952 shikimate transporter; Provisional
Probab=99.60 E-value=5e-14 Score=145.44 Aligned_cols=146 Identities=7% Similarity=-0.036 Sum_probs=103.1
Q ss_pred CCChHhHHHHHHHHHHhhh-hhhhhccHHH-HHHHh--CCCHHHHHHHHH-----HHHHHhhc-cccccccccccCchHH
Q 013969 9 RPPWVGLGAAVWVQIAAGN-AYNFPLYSHS-LKSVL--GFNQHQLTMLGV-----ANDIGENV-GLLPGLASNKFPPWLV 78 (433)
Q Consensus 9 ~~~w~~l~~~~l~~~~~g~-~y~~s~~~~~-l~~~~--g~s~~~~~~i~~-----~~~~~~~~-~~~~G~l~Dr~G~r~~ 78 (433)
.++|..+..+++.....+. ...++.+.|. +.+++ +.++.+ +++.+ ...++..+ +++.|++.||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM-GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH-HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 3456666566555544433 5566666665 45565 777763 44322 22233333 6788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCchhHH--------HHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhh
Q 013969 79 LFIGSLACFFGYGVLWLAVSRTVESLPYW--------LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGY 149 (433)
Q Consensus 79 ~~ig~~l~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~ 149 (433)
+.++.++++++..+..+. ++++ .+.+++++.|++.|..+......+.||+| ++||+..+....+
T Consensus 97 l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g 169 (438)
T PRK09952 97 LMLTVWMMGIATALIGLL-------PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVG 169 (438)
T ss_pred HHHHHHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 999999999988765542 1232 45668999999999888888899999998 5699999998888
Q ss_pred hhhHHHHHHHHHH
Q 013969 150 GGLSAAVFTEIYN 162 (433)
Q Consensus 150 ~glg~~i~~~l~~ 162 (433)
.++|..+...+..
T Consensus 170 ~~~G~~l~~~~~~ 182 (438)
T PRK09952 170 YGVGLLLSTGLVS 182 (438)
T ss_pred HHHHHHHHHHHHH
Confidence 8888766654443
No 57
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.59 E-value=1.5e-13 Score=140.24 Aligned_cols=157 Identities=17% Similarity=0.196 Sum_probs=116.4
Q ss_pred CccccCCCCCChHhHHHHHHHHHHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHH
Q 013969 1 MVTLKAGSRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVL 79 (433)
Q Consensus 1 ~~~~~~~~~~~w~~l~~~~l~~~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~ 79 (433)
|-+.||..+-....++....+. ..+....+++..+.+++++|+|..+++++.+...+... ..++.|++.||+|+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l 79 (400)
T PRK11646 1 MSRVSQARNLGKYFLLIDNMLV-VLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI 79 (400)
T ss_pred CCCCcccccccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH
Confidence 4455665544443333333222 23334456666667889999999999997777666664 589999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHH
Q 013969 80 FIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFT 158 (433)
Q Consensus 80 ~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~ 158 (433)
.++.++..++++.+... +++|.+++.+++.|++.+....+....+.+++| ++||++.|+......+|..+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~ 152 (400)
T PRK11646 80 VTGMLMRAAGFATMAIA-------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGA 152 (400)
T ss_pred HHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988866441 246777778888888887666666778899997 5799999999999889988887
Q ss_pred HHHHHHh
Q 013969 159 EIYNMLL 165 (433)
Q Consensus 159 ~l~~~~~ 165 (433)
++...+.
T Consensus 153 ~l~g~l~ 159 (400)
T PRK11646 153 LLGSWLL 159 (400)
T ss_pred HHHHHHH
Confidence 7666554
No 58
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.59 E-value=1.6e-13 Score=139.01 Aligned_cols=146 Identities=13% Similarity=-0.013 Sum_probs=106.8
Q ss_pred hHhHHHHHHHHHH-hhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHH
Q 013969 12 WVGLGAAVWVQIA-AGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFG 89 (433)
Q Consensus 12 w~~l~~~~l~~~~-~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g 89 (433)
|+.+....+...+ ....+.+....|.+.+++|+|..+.+++.+...++.. ..++.|++.||+|||+++.++.++..++
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 86 (394)
T PRK11652 7 VNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILG 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 4444444443322 2334455556788999999999999998887778775 4899999999999999999999988888
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 90 YGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
.+.+... ++++.+++.+++.|++.+...........+++| ++|+.+.++...+..++..+.+.+...+
T Consensus 87 ~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 155 (394)
T PRK11652 87 TLVALFA-------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLL 155 (394)
T ss_pred HHHHHHH-------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765431 246777778888888877655555566778888 5699999998777777776665555433
No 59
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.58 E-value=7.4e-14 Score=144.98 Aligned_cols=128 Identities=16% Similarity=-0.016 Sum_probs=99.1
Q ss_pred hhhccHHHHHHHh--------CCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHH---
Q 013969 30 NFPLYSHSLKSVL--------GFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAV--- 97 (433)
Q Consensus 30 ~~s~~~~~l~~~~--------g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~--- 97 (433)
..+...|.+++.+ +++..+.+++.+...++.. .+++.|++.||+|||++++++.+++.++.+..++..
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~ 109 (479)
T PRK10077 30 VISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGF 109 (479)
T ss_pred eehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 3344445577777 8999999998888888885 499999999999999999999999888776554310
Q ss_pred hcc-cCc-hhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHH
Q 013969 98 SRT-VES-LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVF 157 (433)
Q Consensus 98 ~~~-~~~-~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~ 157 (433)
... .++ ..++.+++++++.|++.|..+......+.+|+| ++||+++|+...+..+|..+.
T Consensus 110 ~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~ 172 (479)
T PRK10077 110 TSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV 172 (479)
T ss_pred ccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 000 001 124456678999999999988888999999998 569999999988887887665
No 60
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.57 E-value=2.5e-13 Score=135.85 Aligned_cols=122 Identities=11% Similarity=0.043 Sum_probs=81.6
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHH-HHHHHHHHHHHHHHHhcccCchhHHHHHHHHH
Q 013969 37 SLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIG-SLACFFGYGVLWLAVSRTVESLPYWLLWIALC 114 (433)
Q Consensus 37 ~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig-~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (433)
.+++++|+|..+++++.+...+.. ..+++.|++.||+|+|+.+++. .++..++...+.. +++++.+++.++
T Consensus 23 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~ 95 (375)
T TIGR00899 23 FLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW-------NRNYFLLLVLGV 95 (375)
T ss_pred HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh-------cchHHHHHHHHH
Confidence 468899999999999877766655 4589999999999999876654 4444445444332 134677666666
Q ss_pred HHHhchhhhhhhHHHHHhhcccCC-chhH--HHHHHhhhhhHHHHHHHHHHHHh
Q 013969 115 VATNSSAWLGTAVLVTNMRNFPLS-RGTV--AGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 115 l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a--~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+.|.+.+...........++.|++ |+.+ .++...+.++|.++.+++...+.
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~ 149 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLA 149 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHH
Confidence 665544444444445556666643 5544 57777777788888776666554
No 61
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=2.6e-13 Score=137.64 Aligned_cols=130 Identities=13% Similarity=0.007 Sum_probs=96.0
Q ss_pred hhhhhccHHHHHHHhCCCHHHH-----HHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhccc
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQL-----TMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~-----~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
.+.+..+.|.+.+++|++..+. +++.+...++.. ..++.|++.||+|+|+++.++.++.+++.+.+...
T Consensus 30 ~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~----- 104 (408)
T PRK09874 30 FSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA----- 104 (408)
T ss_pred HHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH-----
Confidence 3455667788888899987653 555555556654 58999999999999999999999888887755431
Q ss_pred CchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 102 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
.+++.+++.+++.|++.+. +......+.+++| ++||++.|+...+..+|..+.+++...+.
T Consensus 105 --~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 166 (408)
T PRK09874 105 --QNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLA 166 (408)
T ss_pred --hhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2467777777777776553 4445566788888 56999999998888888877766655443
No 62
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.56 E-value=9.7e-14 Score=138.59 Aligned_cols=130 Identities=8% Similarity=-0.139 Sum_probs=92.2
Q ss_pred hhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhcccccccccccc-----CchHHH-HHHHHHHHHHHHHHHHHHhcccCc
Q 013969 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKF-----PPWLVL-FIGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 30 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~~~-~ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
.++...|.+.+++|+|.+|++++.+.. +.....++.|++.||+ ||||.+ +++.++.++....+.+. .. .
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~-~~---~ 80 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLVG-LPYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL-VP---S 80 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHHH-HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC-Cc---c
Confidence 344556778899999999999986553 3323489999999998 899974 56666666665544331 11 1
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
.+++.++...++.+.+.+....+....+.+++| ++|+++.|+...+..+|..+.+.+...+
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 142 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVL 142 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235566565556666666666777788999997 5699999999999889888776665433
No 63
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.53 E-value=7.4e-13 Score=135.69 Aligned_cols=130 Identities=13% Similarity=0.003 Sum_probs=101.5
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
...+..-.|.+.++++.+.++.++..+...++.. ..++.|++.||+|||+++.++.++.+++....... +++
T Consensus 32 ~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------~~~ 104 (413)
T PRK15403 32 TDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-------TSM 104 (413)
T ss_pred HHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-------CCH
Confidence 4555556677899999999999987666667765 58999999999999999999999888887755431 247
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+.+++.+++.|++.+.........+.++||+ +|++++++..+..++|..+.+.+...+
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l 163 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL 163 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888889999988876555556677889985 589999998888888887765554433
No 64
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.53 E-value=4e-13 Score=134.36 Aligned_cols=132 Identities=11% Similarity=-0.023 Sum_probs=92.1
Q ss_pred hhhhhccHHHHHHHhC--CCHHHHHHHHHHHHH-----Hh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhc
Q 013969 28 AYNFPLYSHSLKSVLG--FNQHQLTMLGVANDI-----GE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSR 99 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g--~s~~~~~~i~~~~~~-----~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~ 99 (433)
.|.++...+.+.+++. .++++.+...+...+ +. ..+++.|++.||+|+|+++.++.++..++.+..... .+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-~~ 87 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL-PS 87 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC-CC
Confidence 5666767777766654 444555553332222 22 237899999999999999999999999888766542 11
Q ss_pred ccCchh---HHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHH
Q 013969 100 TVESLP---YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIY 161 (433)
Q Consensus 100 ~~~~~~---~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~ 161 (433)
. .... .+.+++.+++.|++.+..+.+....+.+++| ++|+++.++...+..+|..+.+.+.
T Consensus 88 ~-~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 88 Y-ATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred h-hhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 1235557888998888777777888999998 5699999999888888877765443
No 65
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.52 E-value=8.8e-13 Score=129.43 Aligned_cols=133 Identities=24% Similarity=0.247 Sum_probs=112.1
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..+.++.+.|.+.+++|.+..+.+++.+...++.. ..++.|++.||+|||+.+.++.++..++...+... .+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~ 86 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SS 86 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------cc
Confidence 45667778888889999999999998888878775 49999999999999999999999999988876552 24
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
++.+++.+++.|++.+..+.+....+.+++|+ +|+++.++.....++|..+.+.+...+.+
T Consensus 87 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 87 LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777788899999888888888999999995 69999999999999999888766665543
No 66
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.50 E-value=4.9e-13 Score=136.68 Aligned_cols=133 Identities=9% Similarity=-0.020 Sum_probs=101.6
Q ss_pred hhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHH
Q 013969 31 FPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (433)
Q Consensus 31 ~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l 109 (433)
...+.|.+.++++.+..+.+++.+...++.. ..++.|++.||+|+|+++.++.++.++++..+...... ..++++.+
T Consensus 36 ~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 113 (417)
T PRK10489 36 LGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL--PEPSLLAI 113 (417)
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc--CCCcHHHH
Confidence 3445666778888999999998888888875 48999999999999999999988888877655431111 12346777
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 110 WIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 110 ~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
++.+++.|++.+....+....+.+++|+ +|+++.++.....++|..+.+.+...+.
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~ 170 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLI 170 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHH
Confidence 7777888887777666667888999984 5999999988888888887766665544
No 67
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.50 E-value=5.9e-13 Score=135.92 Aligned_cols=163 Identities=12% Similarity=0.020 Sum_probs=136.5
Q ss_pred hhhhhhhccHHHHHHHhCCCHHH-HHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCc
Q 013969 26 GNAYNFPLYSHSLKSVLGFNQHQ-LTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 26 g~~y~~s~~~~~l~~~~g~s~~~-~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
-.--..++..|.+++++|+|.+| .+.+.+....+.. ..+++|++.||+|+|+++.++++..++...++.+.
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa------- 112 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG------- 112 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------
Confidence 34567888899999999999999 8888888888875 59999999999999999999999999988876652
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHH--HHHHHHHH
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKL--LLVLAVGV 180 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~--l~~~a~~~ 180 (433)
.+++.+.+.+++.|++.|..+ +....+.+|||+ +|++++|+..++..+|.++.+++...+...+|+.| +..+++.+
T Consensus 113 ~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s 191 (511)
T TIGR00806 113 TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVF 191 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 247788889999999999888 889999999994 69999999999999999999988888444455544 44567777
Q ss_pred HHHHHHHHhhcccCCC
Q 013969 181 PAVCLVMMYFVRPCTP 196 (433)
Q Consensus 181 ~~v~l~~~~~~r~~~~ 196 (433)
..++++.+++++.+++
T Consensus 192 ~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 192 MTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHhCCCCch
Confidence 8888888888885544
No 68
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.50 E-value=4.2e-13 Score=145.94 Aligned_cols=182 Identities=13% Similarity=0.023 Sum_probs=139.4
Q ss_pred CCChHhHHHHHHHHHHhhh-hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHH
Q 013969 9 RPPWVGLGAAVWVQIAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLAC 86 (433)
Q Consensus 9 ~~~w~~l~~~~l~~~~~g~-~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~ 86 (433)
+.+|.+++...+..+..+. ....+...|.+++++|++..+.+++.+...+++.+ .+++|+++||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3456655555554444443 45677788899999999999999988888888864 899999999999999999999888
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+++.++..+. ++++.+++++++.|+|.+..+......+.+++| ++||+++++..++..+|.++.+.+...+.
T Consensus 243 ~i~~ll~afa-------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 243 GFFAFFSSFV-------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877655432 247788888999999998888888899999999 56999999999998899887766554443
Q ss_pred cC-------------ChhHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 013969 166 HN-------------SSSKLLLVLAVGVPAVCLVMMYFVRPCTPA 197 (433)
Q Consensus 166 ~~-------------~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~ 197 (433)
+. ..|++++.++.++.++.++..+++++.|.+
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrw 360 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRF 360 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 21 124556666777777777777777776554
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.49 E-value=4e-13 Score=137.53 Aligned_cols=132 Identities=17% Similarity=0.116 Sum_probs=81.9
Q ss_pred hhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 30 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
.++.+...+++++|+|+.+++++.+...++.. .+++.|++.||+|+|+++.++....+++...+...... ..+.
T Consensus 29 ~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 103 (420)
T PRK09528 29 WFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFA-----PLLQ 103 (420)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHH-----HHHH
Confidence 45555556788899999999998777777775 59999999999999999988776655543322110000 0111
Q ss_pred --HHHHHHHHHhchhhhhhhHHHHHh---hcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 109 --LWIALCVATNSSAWLGTAVLVTNM---RNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 109 --l~~~~~l~g~g~g~~~~~~~~~~~---~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
......+.++..+..+.+...... +.++++||++.|......++|.++.+++...+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~ 166 (420)
T PRK09528 104 YNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN 166 (420)
T ss_pred HHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh
Confidence 111112222222222222222333 3345668888888888888999888777665543
No 70
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.47 E-value=1.4e-13 Score=148.23 Aligned_cols=135 Identities=13% Similarity=0.022 Sum_probs=107.1
Q ss_pred hhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHH--hc-------
Q 013969 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAV--SR------- 99 (433)
Q Consensus 30 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~--~~------- 99 (433)
.++...++++++|+++.++.+++.+...++.. ..++.|++.||+|+|+.+.+|.+++++|.+++++.- .+
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 44556678999999999999999888888885 489999999999999999999999999998876531 00
Q ss_pred -----c-----------c-----------------C--chhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHH
Q 013969 100 -----T-----------V-----------------E--SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVA 143 (433)
Q Consensus 100 -----~-----------~-----------------~--~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~ 143 (433)
. . . +..+..+++.+++.|+|.+..++.....+.+|+| ++|++++
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 0 0 0 0123445568999999999888888999999998 5699999
Q ss_pred HHHHhhhhhHHHHHHHHHHHH
Q 013969 144 GILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 144 gi~~~~~glg~~i~~~l~~~~ 164 (433)
|+..++..+|.++...+...+
T Consensus 211 ~i~~~~~~iG~~lG~llgg~l 231 (633)
T TIGR00805 211 GILESIAVFGPAFGYLLGSFC 231 (633)
T ss_pred HHHHHHHHhhhHHHHHHHHHH
Confidence 999888888887765554433
No 71
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.45 E-value=2.7e-12 Score=147.20 Aligned_cols=128 Identities=15% Similarity=0.068 Sum_probs=95.3
Q ss_pred ccHHHHHHHhCCCHHH--HHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHH
Q 013969 33 LYSHSLKSVLGFNQHQ--LTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~--~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l 109 (433)
+..+.+..+++.+.+. .+++.++..++.. +++++|+++||+|+|++++++.++..++.++..+.... .+++.+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~~l 106 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL----GWFWLA 106 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH----ccHHHH
Confidence 3444566677776544 4666666666664 59999999999999999999887766655544332211 237788
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 110 WIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 110 ~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
++.+++.|++.++...+....+.+++| ++|++++|+...+.++|.++.+.+...+
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 888889999988888778889999998 5699999999999888887776665544
No 72
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.44 E-value=8.5e-12 Score=126.99 Aligned_cols=122 Identities=15% Similarity=0.094 Sum_probs=97.1
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (433)
..+.+.++++.+..+.+++.+...+... +.|++|++.||+|+|++++++.++.+++.+.+... .++ .+.
T Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~-------~~~---~~~ 94 (393)
T PRK11195 25 AAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG-------IHP---LLA 94 (393)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-------HHH---HHH
Confidence 3445678899999999998887777775 59999999999999999999999988876654331 122 345
Q ss_pred HHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 113 LCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 113 ~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+++.|++.++.+++....+.+++| ++|+++.|+......+|..+.+.+...+.
T Consensus 95 r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 95 YGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999888888999999999 56999999998887777777766655544
No 73
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.43 E-value=8.1e-12 Score=126.44 Aligned_cols=240 Identities=12% Similarity=0.020 Sum_probs=148.9
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHH----HHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVL----FIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~----~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
|.|.+.+++|+|.+|++++.+...+... .+++.|.+.||+|+|+.. .++..+..+.+. . . ++++|.
T Consensus 26 ~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~---~-~-----~~~~~~ 96 (382)
T TIGR00902 26 FFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS---A-G-----AHNAWL 96 (382)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH---H-h-----hhhHHH
Confidence 4557788899999999997777666664 599999999999975432 333222222111 1 1 124777
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHH
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMM 188 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l~~~ 188 (433)
+++.+++.+.+.+... +....+..+++++|+++.|....+.++|.++.+++...+.+.
T Consensus 97 l~~~~~l~~~~~~~~~-p~~~al~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~--------------------- 154 (382)
T TIGR00902 97 LFIAIGLFALFFSAGM-PIGDALANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGM--------------------- 154 (382)
T ss_pred HHHHHHHHHHHHccch-hHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 7776666665555443 334444566688899999999888889998888777766532
Q ss_pred hhcccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 013969 189 YFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTS 268 (433)
Q Consensus 189 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 268 (433)
.+|+..+.. +++.+. +.......+ +
T Consensus 155 -----------------~g~~~~f~~---~~~~~~-------------------------~~~~~~~~~---------~- 179 (382)
T TIGR00902 155 -----------------FDEQNILAI---LTAGLA-------------------------FMLIGFLIK---------P- 179 (382)
T ss_pred -----------------cChhHHHHH---HHHHHH-------------------------HHHHHHHcC---------C-
Confidence 122221111 000000 000000000 0
Q ss_pred cccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhhcccccccccCCCCCCCCCcHHHHh
Q 013969 269 ESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAV 348 (433)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l 348 (433)
+. ++ ++ ++ ++ + +. + +..+.++.+
T Consensus 180 ~~-----------------------~~---~~---------~~-~~------------~----~~--~---~~~~~~~~l 202 (382)
T TIGR00902 180 TI-----------------------PP---KD---------AI-PE------------D----ES--Q---GDSAFIALL 202 (382)
T ss_pred CC-----------------------CC---Cc---------cc-cc------------c----cc--c---cchhHHHHH
Confidence 00 00 00 00 00 0 00 0 012457899
Q ss_pred hhhhHHHHHHHHHhhcccceeeecchhhHHHhhcCCcc--chhHHHHHHhHHHHhhhcccchHHHHHhhh
Q 013969 349 VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRLVQ 416 (433)
Q Consensus 349 ~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~~~~~ 416 (433)
|+|+||.+.+..++..++...+.+...+..++.|.++. ....++..++..++.+++|.+.||+++|+.
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~ 272 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDL 272 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHH
Confidence 99999999988888777777777888888888888775 456777888888888888888888887764
No 74
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.43 E-value=7.4e-12 Score=131.28 Aligned_cols=133 Identities=12% Similarity=-0.038 Sum_probs=96.2
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhcccccccccccc-----CchHH-HHHHHHHHHHHHHHHHHHHhccc
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKF-----PPWLV-LFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~~-~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
.+..+-..|.+.++.|.|.++++.++... ......++.|.+.||+ |+|+. +.++.+..+++...+++. .
T Consensus 28 ~~~~~~~l~~~l~~~g~~~~~ig~~~~~~-~~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~--~-- 102 (491)
T PRK11010 28 LALTSGTLQAWMTVENIDLKTIGFFSLVG-QAYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFL--E-- 102 (491)
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHc--C--
Confidence 34445556777778899999999874433 2234689999999999 99986 556666666666654432 1
Q ss_pred CchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 102 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+..+++.+.+..++.+++.+....+......+|+| ++||++.++...+..+|..+.+.+...+.
T Consensus 103 ~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~ 167 (491)
T PRK11010 103 PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLA 167 (491)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12246777767777777777777777788999998 67999999999998898887766555443
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.42 E-value=1.9e-11 Score=124.24 Aligned_cols=148 Identities=15% Similarity=0.044 Sum_probs=82.8
Q ss_pred CCCCChHhHHHHHHHHHHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHH-HHHHhhccccccccccccCchHHHH-HHHH
Q 013969 7 GSRPPWVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVA-NDIGENVGLLPGLASNKFPPWLVLF-IGSL 84 (433)
Q Consensus 7 ~~~~~w~~l~~~~l~~~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~-~~~~~~~~~~~G~l~Dr~G~r~~~~-ig~~ 84 (433)
...+.|..++..++..+..+ ...+.+.+.+++++|+|.++++++.+. ..++...+++.|.+.||+|+||.++ .+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~ 90 (393)
T PRK15011 13 FDLTSTAFLIVAFLTGIAGA--LQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCL 90 (393)
T ss_pred ccchhHHHHHHHHHHHHHHH--HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHH
Confidence 33444544444333332222 233344444789999999999997554 4445556555555599999998755 4445
Q ss_pred HHHHHHHHHHHHHhcccCchhHHHHHHHHH-HHHhchhhhhhhHHHHHhhcccCCch----hHHHHHHhhhhhHHHHHHH
Q 013969 85 ACFFGYGVLWLAVSRTVESLPYWLLWIALC-VATNSSAWLGTAVLVTNMRNFPLSRG----TVAGILKGYGGLSAAVFTE 159 (433)
Q Consensus 85 l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-l~g~g~g~~~~~~~~~~~~~Fp~~RG----~a~gi~~~~~glg~~i~~~ 159 (433)
+.+++...+.+. .+++.+++.+. +.+.+. . ..+......++++++|+ ...++..++.++|.++.++
T Consensus 91 ~~~~~~~~~~~~-------~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~ 161 (393)
T PRK15011 91 LGVLACTLFAWN-------RNYFVLLFVGVFLSSFGS-T-ANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPP 161 (393)
T ss_pred HHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHH-h-hHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhH
Confidence 544555443331 23566554433 333333 2 33344444444433333 3346777777888888877
Q ss_pred HHHHHh
Q 013969 160 IYNMLL 165 (433)
Q Consensus 160 l~~~~~ 165 (433)
+...+.
T Consensus 162 i~~~l~ 167 (393)
T PRK15011 162 LAYALA 167 (393)
T ss_pred HHHHHH
Confidence 776654
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.41 E-value=1.5e-11 Score=124.35 Aligned_cols=124 Identities=14% Similarity=0.163 Sum_probs=84.4
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCch----HHHHHHHHHHHHHHHHHHHHHhcccCchhHH
Q 013969 33 LYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPW----LVLFIGSLACFFGYGVLWLAVSRTVESLPYW 107 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r----~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~ 107 (433)
-+.|.+.+++|+|.++++++.+...+... .+++.|.+.||+|+| +.+.++.+...+.+ . .. ++++|
T Consensus 25 p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~---~--~~----~~~~~ 95 (382)
T PRK11128 25 PFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAF---W--FG----AHSFW 95 (382)
T ss_pred hhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHH---H--Hh----cccHH
Confidence 34456678899999999998777777765 599999999999984 33333332222211 1 11 13478
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 108 LLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 108 ~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
.+++.+.+.|++.+..... ...+..+++++|+++.|.......+|.++.+++...+.+
T Consensus 96 ~l~i~~~l~g~~~~~~~~~-~~a~~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~ 153 (382)
T PRK11128 96 LLFVAIGLFNLFFSPLVPL-TDALANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVS 153 (382)
T ss_pred HHHHHHHHHHHHHcccccH-HHHHHHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 8777777777766554443 344455557778888888888888888888877776653
No 77
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.41 E-value=1.2e-11 Score=125.95 Aligned_cols=137 Identities=12% Similarity=0.028 Sum_probs=96.9
Q ss_pred Hhhhhhhhhc-cHHHHHHHhCCCHHHHHHHHHHHHHHhhcccccccccccc-----CchH-HHHHHHHHHHHHHHHHHHH
Q 013969 24 AAGNAYNFPL-YSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKF-----PPWL-VLFIGSLACFFGYGVLWLA 96 (433)
Q Consensus 24 ~~g~~y~~s~-~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~-----G~r~-~~~ig~~l~~~g~~~~~~~ 96 (433)
..|..+.+.. -.|.+-++.|+|.+|++++...... ..+.++.|++.||+ |+|| .+.++.+..+++...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~ 88 (402)
T PRK11902 10 ASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC 88 (402)
T ss_pred HHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 3455444332 3344556679999999998665543 45699999999999 8876 6777777777776655442
Q ss_pred HhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 97 VSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 97 ~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
.. ..++|.++++.++.+...+..+.+....+.+++|+ +|+++.++...++++|..+.+.+...+.
T Consensus 89 --~~--~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 89 --PP--HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred --Cc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 11 12466666666666666666667778889999985 4999999999998888888776655443
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.39 E-value=2e-11 Score=123.92 Aligned_cols=124 Identities=13% Similarity=-0.021 Sum_probs=76.0
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcc-cCchhHHHHHHHHH
Q 013969 37 SLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRT-VESLPYWLLWIALC 114 (433)
Q Consensus 37 ~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~ 114 (433)
.+++++|+|..+.+++.+...+... ..++.|++.||+|+|++++.+.+..+++...+....... .....++..++.++
T Consensus 28 ~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (396)
T TIGR00882 28 WLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGL 107 (396)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3577899999999998777777775 589999999999999999988776665544332211110 00001222233344
Q ss_pred HHHhchhhhhhhHHHHHhhcc---cCCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 115 VATNSSAWLGTAVLVTNMRNF---PLSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 115 l~g~g~g~~~~~~~~~~~~~F---p~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+.|++.+.... ....++ +++++...|......++|.++.+++...+
T Consensus 108 ~~g~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 156 (396)
T TIGR00882 108 YLGFVFSAGAG----AIEAYIEKVSRNSNFEYGKARMFGCVGWALCASIAGIL 156 (396)
T ss_pred HHHHHhccchh----hHHHHHHHhhhhcccccchhhhhcccHHHHHHHHHhhh
Confidence 44544443332 223333 24456666776666678887776665443
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.38 E-value=1.9e-11 Score=140.49 Aligned_cols=123 Identities=15% Similarity=0.034 Sum_probs=86.8
Q ss_pred HHHHhCCCHHH-HHHHHHHHHHHh-hccccccccccccCchHHHHHHHH--HHHHHHHHHHHHHhcccCchhHHHHHHHH
Q 013969 38 LKSVLGFNQHQ-LTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSL--ACFFGYGVLWLAVSRTVESLPYWLLWIAL 113 (433)
Q Consensus 38 l~~~~g~s~~~-~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~--l~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 113 (433)
+....+.+... .++..++..+.. ++++++|+++||+|+|+++..... +...+...+.. . ..++|++++.+
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~--~----~~s~~~l~~~~ 115 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGF--H----LNSVPLLFAAL 115 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHH--H----HhhHHHHHHHH
Confidence 34444444434 455555566666 459999999999999998643222 22222221111 1 12478888899
Q ss_pred HHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 114 CVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 114 ~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
++.|++.++...+...++.+++| ++|++++|+..++.++|.++.+++...+..
T Consensus 116 ~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~ 169 (1140)
T PRK06814 116 FLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI 169 (1140)
T ss_pred HHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998888888899999998 569999999999999999888887776654
No 80
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.37 E-value=8.3e-13 Score=132.72 Aligned_cols=139 Identities=12% Similarity=0.096 Sum_probs=112.1
Q ss_pred hHhHHHHHHHHHHh-hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHH
Q 013969 12 WVGLGAAVWVQIAA-GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFG 89 (433)
Q Consensus 12 w~~l~~~~l~~~~~-g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g 89 (433)
|+.++.-.++.+.. .--|+..-..+.+++.||++.+..+++.+...+.. .++|+.|++.|||.|++++.+|..+..++
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLA 111 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHH
Confidence 33343333444333 34677777778899999999999999988887776 56999999999999999999999999998
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHH
Q 013969 90 YGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVF 157 (433)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~ 157 (433)
.+...+. ..+|++.+++.+.|+|-+...+.+...++..|| ++|+++.|+.......|+.+.
T Consensus 112 v~~~~fs-------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG 173 (493)
T KOG1330|consen 112 VFASGFS-------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLG 173 (493)
T ss_pred HHHHHHH-------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccccccee
Confidence 8855442 238999999999999999888888999999999 579999999877766666554
No 81
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=1.5e-10 Score=115.05 Aligned_cols=267 Identities=18% Similarity=0.129 Sum_probs=184.0
Q ss_pred HHhhh-hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 013969 23 IAAGN-AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRT 100 (433)
Q Consensus 23 ~~~g~-~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~ 100 (433)
+..|. .-.-.+..|.+++.|++++.|++++..+...+.. .++++|++.+|+|.|+.+++|..++++|+.+++-+...
T Consensus 23 fl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~- 101 (422)
T COG0738 23 FLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS- 101 (422)
T ss_pred HHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh-
Confidence 33443 4566789999999999999999999888777775 49999999999999999999999999999988753222
Q ss_pred cCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 013969 101 VESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVG 179 (433)
Q Consensus 101 ~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~ 179 (433)
-.+..++...++.|.|.+...+++...+....|+ +...=+.+..+++++|+++.+++.+.++..++...
T Consensus 102 ---~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~------- 171 (422)
T COG0738 102 ---KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT------- 171 (422)
T ss_pred ---hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc-------
Confidence 1244444466778889999999999999999975 46667788999999999999999988764221000
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCCcc--------hHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHHHHHHHHH
Q 013969 180 VPAVCLVMMYFVRPCTPASGEDSAAPSH--------FLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLM 251 (433)
Q Consensus 180 ~~~v~l~~~~~~r~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 251 (433)
. ++++... +++-|.. ++.++.. +.
T Consensus 172 --------------~------~~~~~~~~~~~~~~~v~~pYl~---~~~~lvl-------------------------l~ 203 (422)
T COG0738 172 --------------M------SAAQILAIKGADASSVQFPYLI---LAGLLVL-------------------------LA 203 (422)
T ss_pred --------------c------CHHHHHHHHHHHHHhhhhHHHH---HHHHHHH-------------------------HH
Confidence 0 0001111 2222221 1111100 00
Q ss_pred hhhhhhhhhhhhccccCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhhccccccc
Q 013969 252 APLAIPVKMTICRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRR 331 (433)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (433)
.-.. . .+.|+. + + +++++
T Consensus 204 v~~~-~------~k~p~~-------------------------~---~-------------~~~~~-------------- 221 (422)
T COG0738 204 VLIL-L------SKLPDL-------------------------Q---V-------------AAPSL-------------- 221 (422)
T ss_pred HHHH-h------ccCCcC-------------------------C---c-------------ccccc--------------
Confidence 0000 0 001111 0 0 01100
Q ss_pred ccCCCCCCCCCcHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHh-hcCCcc--chhHHHHHHhHHHHhhhcccch
Q 013969 332 KKRRPKRGEDFKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIA-QGVHDT--TILLSLFSFCNFVGRLGGGVVS 408 (433)
Q Consensus 332 ~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s-~G~~~~--~~~vsl~si~n~~GRl~~G~ls 408 (433)
.+ + ++.+..++.|+|.+|+-.+..++-.|.-.+.=+.+.+++.+ +|.++. +.+++.+-++-.+||+++-++.
T Consensus 222 ~~--~---~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm 296 (422)
T COG0738 222 GA--S---GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALM 296 (422)
T ss_pred cc--c---ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 1 12367899999999999999999999999999999999999 576654 6799999999999998777776
Q ss_pred HHHHHhh
Q 013969 409 EHFVRLV 415 (433)
Q Consensus 409 D~~~~~~ 415 (433)
.|+...+
T Consensus 297 ~~~~~~k 303 (422)
T COG0738 297 SRIKPEK 303 (422)
T ss_pred HHhCHHH
Confidence 6665443
No 82
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.32 E-value=1.3e-10 Score=119.99 Aligned_cols=158 Identities=15% Similarity=0.126 Sum_probs=119.3
Q ss_pred HHHHHHhC--CCHHHHHH----HHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 36 HSLKSVLG--FNQHQLTM----LGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 36 ~~l~~~~g--~s~~~~~~----i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
..+.+++| .|.++..+ +.+...+|..+ ++++|+++||+|||..+.++.++..++.+++...... .++.+
T Consensus 43 ~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~----~~~e~ 118 (485)
T KOG0569|consen 43 ETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA----PSFEM 118 (485)
T ss_pred HHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh----hhHHH
Confidence 33455666 56665543 34455566654 8999999999999999999999888877766654322 24677
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHH-Hhc-CChhHHHHHHHHHHHHHHH
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNM-LLH-NSSSKLLLVLAVGVPAVCL 185 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~-~~~-~~~~~~l~~~a~~~~~v~l 185 (433)
+.+-+++.|+..|.........+.|-=|++ ||....+...+..+|-.+..++... ++. .+.|.+++....+++++.+
T Consensus 119 li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l 198 (485)
T KOG0569|consen 119 LILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL 198 (485)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH
Confidence 777899999999988888888899999966 9999999888887777766555444 443 4568888888898998888
Q ss_pred HHHhhcccCCCC
Q 013969 186 VMMYFVRPCTPA 197 (433)
Q Consensus 186 ~~~~~~r~~~~~ 197 (433)
+..+++++-|++
T Consensus 199 ~~l~~~PESPk~ 210 (485)
T KOG0569|consen 199 ALLPFLPESPKY 210 (485)
T ss_pred HHHhcCCCCcch
Confidence 888888777664
No 83
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.31 E-value=3.5e-11 Score=125.25 Aligned_cols=254 Identities=16% Similarity=0.086 Sum_probs=182.2
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
++++.+....|.+.+.+...++.. +.+++|.|.||+++.+.+....+..++-.++-+. . .+++.+.+.+++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~-~------~s~~~~ialr~ll 144 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA-V------HSFPGLIALRFLL 144 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-H------hhhHHHHHHHHHH
Confidence 457888888999998888888875 4899999999999887777666655553322211 1 2478888899999
Q ss_pred HhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc-------CChhHHHHHHHHHHHHHHHHHH
Q 013969 117 TNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH-------NSSSKLLLVLAVGVPAVCLVMM 188 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~-------~~~~~~l~~~a~~~~~v~l~~~ 188 (433)
|+..+..+++....+..||. ++||+-+|+..+..++|+++.+.+...+++ .+|++.+++-|++.++.++++.
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 99998888888999999997 569999999999999999888888877653 2466677777777777777777
Q ss_pred hhcccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccccC
Q 013969 189 YFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTICRKRTS 268 (433)
Q Consensus 189 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 268 (433)
+++++.|++..- +++.++.. .+ +
T Consensus 225 ~~lp~~P~~~~f---------------------------------l~~~ek~~--------------~~------~---- 247 (495)
T KOG2533|consen 225 FFLPDNPSKAWF---------------------------------LTDEEKEL--------------VV------E---- 247 (495)
T ss_pred EEecCChhhccc---------------------------------cchHHHHH--------------HH------H----
Confidence 777665542100 00000000 00 0
Q ss_pred cccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhhcccccccccCCCCCCCCCcHHHHh
Q 013969 269 ESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDFKFTEAV 348 (433)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l 348 (433)
+. +.++ . +. . .++ .+...++|++
T Consensus 248 ~~---------------------~~~~---~-------------~~------------~----~~~----~~~~~~~~a~ 270 (495)
T KOG2533|consen 248 RL---------------------RESP---S-------------GG------------I----ENK----FKWKGFKEAL 270 (495)
T ss_pred HH---------------------Hhcc---C-------------CC------------c----ccc----cCHHHHHHHH
Confidence 00 0000 0 00 0 000 1234678999
Q ss_pred hhhhHHHHHHHHHhhcccceeeecchhhHHHhh-cCCcc--chhHHHHHHhHHHHhhhcccchHHHH
Q 013969 349 VKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ-GVHDT--TILLSLFSFCNFVGRLGGGVVSEHFV 412 (433)
Q Consensus 349 ~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~-G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~ 412 (433)
++|..|.+.+..+|.........+-+..+.++. |++.. ..+-..+.+...+|-++.|++|||+.
T Consensus 271 ~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 271 KDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred hchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 999999999999999998888888888888883 46553 56888899999999999999999964
No 84
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=8.5e-11 Score=120.76 Aligned_cols=82 Identities=11% Similarity=0.028 Sum_probs=57.7
Q ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCc-hHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHH
Q 013969 32 PLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPP-WLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (433)
Q Consensus 32 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~-r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l 109 (433)
+.+.+.+++++|+|.+|++++.....++.. ..++.|++.||+|+ |+++.++.+..+++.....+. .+++.+
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 95 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV-------TTPAGM 95 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-------cCHHHH
Confidence 334445688899999999998888778875 59999999999965 778887777776665543321 135555
Q ss_pred HHHHHHHHhch
Q 013969 110 WIALCVATNSS 120 (433)
Q Consensus 110 ~~~~~l~g~g~ 120 (433)
++.+++.|++.
T Consensus 96 ~~~~~l~~~~~ 106 (418)
T TIGR00889 96 FPVLLANSLAY 106 (418)
T ss_pred HHHHHHHHHHH
Confidence 55555555543
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.29 E-value=1.3e-10 Score=121.87 Aligned_cols=179 Identities=12% Similarity=0.050 Sum_probs=122.7
Q ss_pred CCCChHhHHHHHHHHH-HhhhhhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHh-hccccccccccc-cCchHHHHHHH
Q 013969 8 SRPPWVGLGAAVWVQI-AAGNAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNK-FPPWLVLFIGS 83 (433)
Q Consensus 8 ~~~~w~~l~~~~l~~~-~~g~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr-~G~r~~~~ig~ 83 (433)
.+++|+.+...+...+ .....|....+.+. +++++|+++++.+++........ ...+++|++.|| +|+|+++.+|.
T Consensus 9 ~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~ 88 (489)
T PRK10207 9 LLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGA 88 (489)
T ss_pred hhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHH
Confidence 3456666655555443 33456665544444 68889999999988666555444 457899999999 99999999999
Q ss_pred HHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC---CchhHHHHHHhhhhhHHHHHHHH
Q 013969 84 LACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL---SRGTVAGILKGYGGLSAAVFTEI 160 (433)
Q Consensus 84 ~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~---~RG~a~gi~~~~~glg~~i~~~l 160 (433)
+++.++++.+.+.. + ....+++.+++.|+|.|+........+.++||+ +|+.+.++...+.++|+++.+.+
T Consensus 89 ~~~~~g~~~~~~~~-----~-~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 89 IVLAIGYFMTGMSL-----L-KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHHHHHHHHhc-----c-chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 99999998766521 1 122344567778889988887788899999973 35778888888888998876655
Q ss_pred HHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhccc
Q 013969 161 YNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFVRP 193 (433)
Q Consensus 161 ~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~ 193 (433)
...+.+. +|+. .+.+..+..+++++...+.++
T Consensus 163 ~g~l~~~~gw~~-~F~i~~i~~~~~~~~~~~~~~ 195 (489)
T PRK10207 163 APVIADKFGYSV-TYNLCGAGLIIALLVYFACRG 195 (489)
T ss_pred HHHHHHhhChHH-HHHHHHHHHHHHHHHHHHcch
Confidence 5554443 3433 334444455555555555553
No 86
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.25 E-value=1.6e-10 Score=118.39 Aligned_cols=124 Identities=10% Similarity=0.052 Sum_probs=82.5
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccc----cCchH-HHHHHHHHHHHHHHHHHHHHhcccCchhHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNK----FPPWL-VLFIGSLACFFGYGVLWLAVSRTVESLPYW 107 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr----~G~r~-~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~ 107 (433)
+.+.+.+++|+|..+++++.+...+... ..|+.|+++|| +|||| .++++.+..+++.++++.. .........+
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 100 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTT-PDFSATGKLV 100 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhC-CCCCcchHHH
Confidence 3344788999999999998887777775 59999999998 67755 5667777877776655442 1110011133
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHH
Q 013969 108 LLWIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFT 158 (433)
Q Consensus 108 ~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~ 158 (433)
.+++..++.+++.++...+......+..+ ++|+++.++...+..+|+.+.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~ 153 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVA 153 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666666655555566666663 5699998887766666665543
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.21 E-value=5.6e-10 Score=116.65 Aligned_cols=158 Identities=12% Similarity=0.041 Sum_probs=114.1
Q ss_pred hhhhhhccHHH-HHHH--hCCCHHHHHHHHHHHHHHhh-ccccccccccc-cCchHHHHHHHHHHHHHHHHHHHHHhccc
Q 013969 27 NAYNFPLYSHS-LKSV--LGFNQHQLTMLGVANDIGEN-VGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 27 ~~y~~s~~~~~-l~~~--~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr-~G~r~~~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
..|....+.|. ++++ +|+|..+.+.+.....++.. ..+++|+++|| +|+|+++.++.++.+++++++...
T Consensus 25 ~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~----- 99 (475)
T TIGR00924 25 SYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS----- 99 (475)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-----
Confidence 34544444444 4666 89999999997776666664 58999999999 899999999999999998866541
Q ss_pred CchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC----CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHH
Q 013969 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL----SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVL 176 (433)
Q Consensus 102 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~----~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~ 176 (433)
++++.+++...+.|+|.|.........+.++||+ +|+++.++...+.++|+++.+++...+.+. +++..+.+.
T Consensus 100 --~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~ 177 (475)
T TIGR00924 100 --IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLA 177 (475)
T ss_pred --ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHH
Confidence 1345566666778888888777777888999973 388999998888999999888887776654 444433333
Q ss_pred HHHHHHHHHHHHhhcc
Q 013969 177 AVGVPAVCLVMMYFVR 192 (433)
Q Consensus 177 a~~~~~v~l~~~~~~r 192 (433)
+ +..+++++...+.+
T Consensus 178 ~-~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 178 A-VGMVIGLLTFFAGR 192 (475)
T ss_pred H-HHHHHHHHHHHHcc
Confidence 3 33344444444433
No 88
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.18 E-value=6.8e-10 Score=116.77 Aligned_cols=155 Identities=9% Similarity=0.017 Sum_probs=106.4
Q ss_pred hhhhhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccc-cCchHHHHHHHHHHHHHHHHHHHHHhccc
Q 013969 25 AGNAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 25 ~g~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr-~G~r~~~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
....|.+..+.+. +++++|+|.++.+.+......... ..+++|++.|| +|+|+++.+|.++.++++.++.+. .
T Consensus 34 ~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~--~-- 109 (500)
T PRK09584 34 RFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS--G-- 109 (500)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh--c--
Confidence 3445666555555 578999999998876554444443 46789999999 599999999999999998766542 1
Q ss_pred CchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC---chhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 013969 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS---RGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAV 178 (433)
Q Consensus 102 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~---RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~ 178 (433)
...+.+++.+.+.|+|.|.........+.++||++ |..+.++...+.++|+.+.+.+...+.+...+++.+.++.
T Consensus 110 --~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~ 187 (500)
T PRK09584 110 --HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSV 187 (500)
T ss_pred --ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 12344445566778888877766778899999843 4557788778888999887777776665433333333444
Q ss_pred HHHHHHH
Q 013969 179 GVPAVCL 185 (433)
Q Consensus 179 ~~~~v~l 185 (433)
+..++++
T Consensus 188 i~~~i~~ 194 (500)
T PRK09584 188 VGMLITV 194 (500)
T ss_pred HHHHHHH
Confidence 4333433
No 89
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.13 E-value=2e-09 Score=112.29 Aligned_cols=175 Identities=14% Similarity=0.047 Sum_probs=113.3
Q ss_pred ChHhHHHHHHHH-HHhhhhhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-cccccccccccc-CchHHHHHHHHHH
Q 013969 11 PWVGLGAAVWVQ-IAAGNAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKF-PPWLVLFIGSLAC 86 (433)
Q Consensus 11 ~w~~l~~~~l~~-~~~g~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~-G~r~~~~ig~~l~ 86 (433)
++..+...+... ......|.+..+.|. +++++|++..+.+.+........+ ..+++|++.||+ |+|+++.+|.++.
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 444444444333 334567777767766 477899999999987666655554 588999999999 9999999999999
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC---CchhHHHHHHhhhhhHHHHHHHHHHH
Q 013969 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL---SRGTVAGILKGYGGLSAAVFTEIYNM 163 (433)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~---~RG~a~gi~~~~~glg~~i~~~l~~~ 163 (433)
.++++++... +. . ...+++...+.++|.|.........+.++||+ +|.++.++...+.++|+.+.+.+...
T Consensus 87 ~lg~lll~~~--~~--~--~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~ 160 (493)
T PRK15462 87 AIGHVVLGAS--EI--H--PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY 160 (493)
T ss_pred HHHHHHHHHh--hc--c--hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH
Confidence 9998755421 10 1 12222222233445555544456678999984 59999999888888888777766666
Q ss_pred HhcC-ChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 164 LLHN-SSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 164 ~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
+.+. +|+..+. ++.+..+++++..++.+
T Consensus 161 L~~~~Gw~~~F~-iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 161 AQEEYSWAMGFG-LAAVGMIAGLVIFLCGN 189 (493)
T ss_pred HHhhhChHHHHH-HHHHHHHHHHHHHHHhh
Confidence 6543 4444333 34444455554444433
No 90
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.13 E-value=2.4e-10 Score=113.02 Aligned_cols=152 Identities=20% Similarity=0.222 Sum_probs=120.2
Q ss_pred HHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHh
Q 013969 40 SVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATN 118 (433)
Q Consensus 40 ~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 118 (433)
+..+-++++++++.....+.. .+.|+.|.+.||+|.|..+++|.+.+.....+|.+. .+++++++.+.+.|+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-------~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-------NSYPMLFVARSLQGV 171 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-------chhHHHHHHHHHhhh
Confidence 344566678888655555666 469999999999999999999999999999887662 247888889999999
Q ss_pred chhhhhhhHHHHHhhcccC-C-chhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhcccCC
Q 013969 119 SSAWLGTAVLVTNMRNFPL-S-RGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFVRPCT 195 (433)
Q Consensus 119 g~g~~~~~~~~~~~~~Fp~-~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~~ 195 (433)
|.++..++.+..+++.||+ + ||.++|+..++.++|-.+.+|+...+++. +...=+++++++.++-..+-.+.+++..
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~ 251 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTE 251 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccc
Confidence 9999999999999999994 3 89999999999999999999988887763 3333355666666666666666666544
Q ss_pred CCC
Q 013969 196 PAS 198 (433)
Q Consensus 196 ~~~ 198 (433)
.+.
T Consensus 252 ~~~ 254 (464)
T KOG3764|consen 252 MDP 254 (464)
T ss_pred cCc
Confidence 433
No 91
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.11 E-value=2.4e-09 Score=110.06 Aligned_cols=162 Identities=14% Similarity=0.217 Sum_probs=111.8
Q ss_pred ccHHHHHHHhCCCH--------HHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCc
Q 013969 33 LYSHSLKSVLGFNQ--------HQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 33 ~~~~~l~~~~g~s~--------~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
.+.+.+.++.|++. +..+...+...+... ..++.|++.||+|+|+++.++.++.++++..+... ... .
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~-~~~--~ 305 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG-DPE--Y 305 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-Ccc--h
Confidence 44455555666554 445665555555554 47899999999999999999999888877655431 110 1
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHH-hhhhhHHHHHHHHHHHHhcC-------ChhHHHH
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILK-GYGGLSAAVFTEIYNMLLHN-------SSSKLLL 174 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~-~~~glg~~i~~~l~~~~~~~-------~~~~~l~ 174 (433)
.+++.+++..++.|++.+..+......+.+++|+ +||++.|+.. ...++|+++.+++...+.+. +++..+.
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 1234555567777777777666667788999995 5999999996 56788998888888777652 2444455
Q ss_pred HHHHHHHHHHHHHHhhcccCCCC
Q 013969 175 VLAVGVPAVCLVMMYFVRPCTPA 197 (433)
Q Consensus 175 ~~a~~~~~v~l~~~~~~r~~~~~ 197 (433)
+.+++.++.+++..+++|+....
T Consensus 386 ~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCcccC
Confidence 66666677777777888766443
No 92
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.10 E-value=2e-09 Score=108.31 Aligned_cols=153 Identities=15% Similarity=0.089 Sum_probs=108.4
Q ss_pred CCCCCChHhHHHHHHHHHHhhhh-hhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHH
Q 013969 6 AGSRPPWVGLGAAVWVQIAAGNA-YNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGS 83 (433)
Q Consensus 6 ~~~~~~w~~l~~~~l~~~~~g~~-y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~ 83 (433)
+..++||..+++..+..+..+.. -.|+.........|| +...+.+.+.+..+... +++++=|+.||+|-|...++|.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 46688999998888877776653 456666667788888 54445556655555554 5889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCchhHH--HHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHH
Q 013969 84 LACFFGYGVLWLAVSRTVESLPYW--LLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEI 160 (433)
Q Consensus 84 ~l~~~g~~~~~~~~~~~~~~~~~~--~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l 160 (433)
++.++|..+=........+ +.+| ....-..+.+..+.+....+.+...-||| ++|..|..+...++.+|.++...+
T Consensus 117 ~ln~iGa~Ir~iss~p~v~-~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVP-PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHhhhccCcccc-ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 9999998754432222121 1244 23334556666666555555688899997 679999999888888998876433
No 93
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.10 E-value=4.3e-09 Score=106.94 Aligned_cols=159 Identities=8% Similarity=0.032 Sum_probs=102.7
Q ss_pred hhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 28 AYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 28 ~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
.+.+..+.|. +++++|++..+.+.+.....+... ..++.|++.||+|+|+.+..+.+...+.+..+. ..+ +
T Consensus 232 ~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~--~~~-----~ 304 (393)
T PRK15011 232 NSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGML--MAH-----S 304 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH--HHh-----h
Confidence 3344445555 577899999998886555444444 478999999999999988877666555443222 111 2
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l 185 (433)
.+.+.+..++.+++.+...........+.+|++||++.++......+|.++.+.+...+.+...+...+..+.+..++++
T Consensus 305 ~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~ 384 (393)
T PRK15011 305 PAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATL 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34444444444444444444445566788999999999998887788888887777766653333344445555556666
Q ss_pred HHHhhccc
Q 013969 186 VMMYFVRP 193 (433)
Q Consensus 186 ~~~~~~r~ 193 (433)
+..+++|+
T Consensus 385 ~~~~~~~~ 392 (393)
T PRK15011 385 FCLLRIKD 392 (393)
T ss_pred HHHHhhcC
Confidence 66666653
No 94
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.09 E-value=6.3e-09 Score=109.01 Aligned_cols=168 Identities=15% Similarity=0.119 Sum_probs=101.8
Q ss_pred hhhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCc
Q 013969 26 GNAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 26 g~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
...|.+..+.|++ ++++|++..+..++.....++..+ .++.|++.||+|+|+++.++.++..++..........
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~---- 339 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS---- 339 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 4567777788885 567899988777766666666654 7889999999999999988887544433222211111
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHH
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVP 181 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~ 181 (433)
.+...+++..++.|++.+.........+.+.||++ ||+++|+......+++.+.+.+...+.+. +.+....+...++.
T Consensus 340 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~ 419 (490)
T PRK10642 340 NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVA 419 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH
Confidence 12344444444555444433344445667899965 99999975444445566666666665542 22222222333455
Q ss_pred HHHHHHHhhcccCCCC
Q 013969 182 AVCLVMMYFVRPCTPA 197 (433)
Q Consensus 182 ~v~l~~~~~~r~~~~~ 197 (433)
+++++..+++++.|.+
T Consensus 420 ~i~~~~~~~~pes~~~ 435 (490)
T PRK10642 420 VIGLITGVTMKETANR 435 (490)
T ss_pred HHHHHHHHHhccccCC
Confidence 5566666666655544
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.06 E-value=2.2e-08 Score=101.39 Aligned_cols=75 Identities=11% Similarity=-0.034 Sum_probs=54.6
Q ss_pred cHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhhcCCcc--chhHHHHH-HhHHHHhhhcccchHHHHHhhhc
Q 013969 343 KFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDT--TILLSLFS-FCNFVGRLGGGVVSEHFVRLVQS 417 (433)
Q Consensus 343 t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~G~~~~--~~~vsl~s-i~n~~GRl~~G~lsD~~~~~~~~ 417 (433)
+.++.+|+|.+|.+....++.......+.....+..++.|+++. ....++.+ +...+|.++.|++.||+++++..
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l 277 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF 277 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 45788999999987776666554444444556677888888865 34555555 47778999999999999988653
No 96
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.02 E-value=5.9e-08 Score=102.86 Aligned_cols=156 Identities=12% Similarity=0.060 Sum_probs=103.0
Q ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHH
Q 013969 32 PLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLW 110 (433)
Q Consensus 32 s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~ 110 (433)
+...+.+-+++|=+ ....|+.+...++.. ..++.|+|+|.||||...++|.++..+|....+. ..+.-.+.
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at-------A~~~~~~i 135 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT-------AQNMNTFI 135 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc-------CCcHHHHH
Confidence 33445677778765 566777777777775 4899999999999999999999999999986543 12455666
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHH-HHhc-CChhHHHHHHHHHHHHHHHHH
Q 013969 111 IALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYN-MLLH-NSSSKLLLVLAVGVPAVCLVM 187 (433)
Q Consensus 111 ~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~-~~~~-~~~~~~l~~~a~~~~~v~l~~ 187 (433)
....+.|+|.|..... ...+++..|+ +|+.+.++....+ +-....++... .+.. .+|++-+.+.++...+..++.
T Consensus 136 ag~~l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~-i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 136 AGMVLYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPF-IITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred HHHHHHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHH-HhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHH
Confidence 6777788887765543 3447888895 4988877655443 22222234444 3333 356655555555555555566
Q ss_pred HhhcccCCCC
Q 013969 188 MYFVRPCTPA 197 (433)
Q Consensus 188 ~~~~r~~~~~ 197 (433)
.++.+++++.
T Consensus 214 ~~fY~PP~~~ 223 (599)
T PF06609_consen 214 FFFYFPPPRA 223 (599)
T ss_pred HHHhCCCchh
Confidence 6777776543
No 97
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.02 E-value=1.9e-08 Score=106.20 Aligned_cols=140 Identities=16% Similarity=0.153 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhh
Q 013969 48 QLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTA 126 (433)
Q Consensus 48 ~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~ 126 (433)
+.+++.+...++..+ +++.|++.|++|||++++++.+++.+|.++.+.+ .+++++.+.+++.|+|.|.....
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-------~~~~~l~~GR~l~G~g~G~~~~~ 162 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-------PSWYQLIVGRILTGLGVGGASVL 162 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHhccchhhhhhc
Confidence 457888888888864 9999999999999999999999999999987663 35788888999999999988777
Q ss_pred HHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcCC--hhHHHHHHHHHHHHHHHHHHhhcccCC
Q 013969 127 VLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNS--SSKLLLVLAVGVPAVCLVMMYFVRPCT 195 (433)
Q Consensus 127 ~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~--~~~~l~~~a~~~~~v~l~~~~~~r~~~ 195 (433)
....+.+.=|+ .||.-.++......+|. +...+.....+.. .|++++.++.++.++..++.+++++-|
T Consensus 163 ~piy~sEiap~~~RG~l~~~~~l~~~~Gi-~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp 233 (513)
T KOG0254|consen 163 APVYISEIAPAHIRGTLVSLYQLFITIGI-LLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESP 233 (513)
T ss_pred chhhHhhcCChhhhHHHHHHHHHHHHHHH-HHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 77788888886 59999999988887555 4445555555543 566788888888777777755555433
No 98
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.01 E-value=1.7e-08 Score=102.85 Aligned_cols=163 Identities=14% Similarity=0.139 Sum_probs=103.7
Q ss_pred hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHH-HHHHHHHHHHHHHHHHHhcccCc
Q 013969 26 GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLF-IGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 26 g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~-ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
...|.+..+.|.+.+++|++..+.+.+.....++.. ..++.|++.||+|+|+... .+.+..+++...+....... .
T Consensus 236 ~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~ 313 (402)
T TIGR00897 236 IGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF--G 313 (402)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc--C
Confidence 345666778888878899999998876665556664 4889999999999988764 33333333333222211111 1
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHH
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPA 182 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~ 182 (433)
.+++...++.++.|++.+.. .+....+.+.+|++||++.|+......+|+.+.+.+...+++. ++...+.+.++ ..+
T Consensus 314 ~~~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~-~~~ 391 (402)
T TIGR00897 314 HSFAVALIIAIALGIFLAGY-VPLAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAA-LYV 391 (402)
T ss_pred CcHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH-HHH
Confidence 12444444555566655443 3344556677888999999999999999998888888877764 33333333333 344
Q ss_pred HHHHHHhhcc
Q 013969 183 VCLVMMYFVR 192 (433)
Q Consensus 183 v~l~~~~~~r 192 (433)
+..+..+|+|
T Consensus 392 i~~~~~~~~~ 401 (402)
T TIGR00897 392 VSAFLTAFIR 401 (402)
T ss_pred HHHHHHHHhc
Confidence 4455555555
No 99
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.01 E-value=3.7e-08 Score=96.89 Aligned_cols=239 Identities=16% Similarity=0.070 Sum_probs=172.5
Q ss_pred hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 26 GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 26 g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
-..-+.+...+++++++|.|.++++++++.-.+.. .++|++.++..|+|.++.+..+.++.++|..+=.. .
T Consensus 26 ~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~--------~ 97 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL--------G 97 (395)
T ss_pred hhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc--------c
Confidence 35677888889999999999999999998887777 46999999999999999999999999999884322 1
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhc--CChhHHHHHHHHHHHH
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLH--NSSSKLLLVLAVGVPA 182 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~--~~~~~~l~~~a~~~~~ 182 (433)
+.+.++.--++.|.|.+..+.-....+-|+||||-|..+|+..+..++|+++.+-+...+-. .+|+..+.+.++.+++
T Consensus 98 ~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~all 177 (395)
T COG2807 98 GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALL 177 (395)
T ss_pred cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHH
Confidence 24556666677888888777766788899999999999999999988888877544443321 1233333222221110
Q ss_pred HHHHHHhhcccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhccccCchhHHHHHHHHHHHHHHhhhhhhhhhhh
Q 013969 183 VCLVMMYFVRPCTPASGEDSAAPSHFLFTQAASVVLGFFLLTTTILDHMIPLSASISYASLFIMIILLMAPLAIPVKMTI 262 (433)
Q Consensus 183 v~l~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~ 262 (433)
.+..-+|-
T Consensus 178 --------------------------------------------------------------------Al~~WlPq---- 185 (395)
T COG2807 178 --------------------------------------------------------------------ALLIWLPQ---- 185 (395)
T ss_pred --------------------------------------------------------------------HHHHHhhh----
Confidence 00000110
Q ss_pred hccccCcccccccCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCChhhHHHHHhhcccccccccCCCCCCCCC
Q 013969 263 CRKRTSESGILDQSVGSSDSVVRAGGDADKSEPLLDPSSSTTDLGSFRDNDDVSEVALLLAEGEGAVRRKKRRPKRGEDF 342 (433)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (433)
..++ ..+ + .+ . + ..
T Consensus 186 ---~~r~-----------------------~~~----~------------~~------------------~--~----~~ 199 (395)
T COG2807 186 ---ALRE-----------------------QAA----S------------IA------------------T--K----LV 199 (395)
T ss_pred ---cccc-----------------------ccc----c------------cc------------------c--c----cc
Confidence 0000 000 0 00 0 0 01
Q ss_pred cHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhhcCCcc--chhHHHHHHhHHHHhhhcccchHH
Q 013969 343 KFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGGVVSEH 410 (433)
Q Consensus 343 t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~G~~~~--~~~vsl~si~n~~GRl~~G~lsD~ 410 (433)
+.....|+|.=|.+-+-+.+.+.....++.=+.+|..++|++.. ..++++..+.....-+..-++.+|
T Consensus 200 ~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R 269 (395)
T COG2807 200 SVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARR 269 (395)
T ss_pred cccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22357789999999888888899999999999999999999875 579999999999999999988777
No 100
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.00 E-value=9.6e-09 Score=105.79 Aligned_cols=167 Identities=11% Similarity=0.041 Sum_probs=92.2
Q ss_pred hhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 27 NAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 27 ~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
..|.+..+.|++ ++++|++..+.+...+...+.. ..+++.|++.||+|+|+++.++.++.++....+....... .
T Consensus 258 ~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~--~- 334 (432)
T PRK10406 258 CFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNV--S- 334 (432)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcC--C-
Confidence 456666777774 6778999988887555444444 4578889999999999988887765544333222111111 1
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHH
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPA 182 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~ 182 (433)
+.+....+..+.+.+.+...........++||+ +||++.|+......+.....+|+...+++. +.+...++...+..+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 335 SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAV 414 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 122221222222222222222334567899995 599999997654333211224454445532 222333334444555
Q ss_pred HHHHHHhhcccCCC
Q 013969 183 VCLVMMYFVRPCTP 196 (433)
Q Consensus 183 v~l~~~~~~r~~~~ 196 (433)
++++..++++++++
T Consensus 415 i~~~~~~~l~~~~~ 428 (432)
T PRK10406 415 VAFLVSLMLHRKGK 428 (432)
T ss_pred HHHHHHHHhhhccc
Confidence 55666666655433
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.00 E-value=2.2e-08 Score=103.46 Aligned_cols=120 Identities=5% Similarity=-0.045 Sum_probs=77.6
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccc----cCchHH-HHHHHHHHHHHHHHHHHHHhcccCchhHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNK----FPPWLV-LFIGSLACFFGYGVLWLAVSRTVESLPYWLLWI 111 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr----~G~r~~-~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~ 111 (433)
+.+++|+|.++++.+.+...+.-. ..|+.|+++|| +|+||. ++.|.+..++...+.+.. ........++.+++
T Consensus 36 ~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~-p~~~~~~~~~~~~~ 114 (444)
T PRK09669 36 YTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT-PDFGATGKIIYACV 114 (444)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC-CCCCcchHHHHHHH
Confidence 688999999999998777766664 59999999999 777554 556777777766544331 11100112344444
Q ss_pred HHHHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHH
Q 013969 112 ALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFT 158 (433)
Q Consensus 112 ~~~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~ 158 (433)
..++.+.+.+....+......++.+ ++|++..+.-..+..+|+.+.+
T Consensus 115 ~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~ 163 (444)
T PRK09669 115 TYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVS 163 (444)
T ss_pred HHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444556666677788875 5588887776666556655543
No 102
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.99 E-value=1.9e-08 Score=100.56 Aligned_cols=147 Identities=15% Similarity=0.143 Sum_probs=98.1
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
+++++|.+..+.+.+......... ..++.|++.||+|+|+++.++.+...+.+..+.. . ++.+.+.+..++.
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~ 298 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA--D-----NSLWALLMLQLLN 298 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH--H-----HHHHHHHHHHHHH
Confidence 567899999998886554444443 4788999999999999998887765555543322 1 1345555555666
Q ss_pred HhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 117 TNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
|++.+..+........+.+|++|+++.|+......+|..+.+.+...+.+. +++..+.+.++ ..+++.+...++|
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~ 374 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIV-MLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH-HHHHHHHHHheec
Confidence 766666665556677888998889999998888778888887777766653 33333333333 3344444444443
No 103
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.97 E-value=1.9e-08 Score=102.22 Aligned_cols=157 Identities=18% Similarity=0.129 Sum_probs=106.9
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
.|....+.|.+.++.|++..+.+.+.....++.. ..++.|++.||+|+|+.+.++.+...+++..+.. . ++.
T Consensus 236 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~-----~~~ 308 (406)
T PRK11551 236 LYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA--A-----PSF 308 (406)
T ss_pred HHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh--c-----CcH
Confidence 4455556778777789999999987766666665 4899999999999999998876666666554322 1 123
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVC 184 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~ 184 (433)
+.+.+..++.|++.+..+........+.+|+ +||++.|+.....++|+++.+.+...+.+. .....++.......+++
T Consensus 309 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 388 (406)
T PRK11551 309 AGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVA 388 (406)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHH
Confidence 4444445555655544555556778899984 599999999999999999888888877764 23333333444444444
Q ss_pred HHHHhhc
Q 013969 185 LVMMYFV 191 (433)
Q Consensus 185 l~~~~~~ 191 (433)
++..+++
T Consensus 389 ~~~~~~~ 395 (406)
T PRK11551 389 ALAALLL 395 (406)
T ss_pred HHHHHHH
Confidence 4444433
No 104
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.95 E-value=2.7e-08 Score=101.66 Aligned_cols=160 Identities=15% Similarity=0.154 Sum_probs=112.9
Q ss_pred hhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 31 FPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 31 ~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
+..+.|.+ ++.+|.+..+.+++.....++.. ..++.|++.||.++++.+.++.++.++++..+.. .++.+.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~ 314 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGL-------MPMWIL 314 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHc-------cchHHH
Confidence 34455665 44499999999987776667765 4788999999998888888888877777664432 123444
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHH
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLV 186 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~ 186 (433)
+.+..++.|++.+.........+.+.+|+ +||++.|+......+|.++.+.+...+.+. +....+...+++.++++++
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 394 (417)
T PRK10489 315 AVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVL 394 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 45555666776665554556678899995 599999999888888888888888877753 4455566666666666666
Q ss_pred HHhhcccCCCC
Q 013969 187 MMYFVRPCTPA 197 (433)
Q Consensus 187 ~~~~~r~~~~~ 197 (433)
....+++.+..
T Consensus 395 ~~~~~~~~~~~ 405 (417)
T PRK10489 395 LLLVLGELRRF 405 (417)
T ss_pred HHHhccccccc
Confidence 66666655443
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.93 E-value=2.3e-08 Score=102.78 Aligned_cols=123 Identities=11% Similarity=0.069 Sum_probs=83.6
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHh-hcccccccccc----ccCchHHHH-HHHHHHHHHHHHHHHHHh-cccCchhHHH
Q 013969 36 HSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASN----KFPPWLVLF-IGSLACFFGYGVLWLAVS-RTVESLPYWL 108 (433)
Q Consensus 36 ~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~D----r~G~r~~~~-ig~~l~~~g~~~~~~~~~-~~~~~~~~~~ 108 (433)
+.+.+.+|+++..++++....-+.- ...|+.|.++| |+||||..+ +|.+..++++.+++.... +.........
T Consensus 26 ~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~ 105 (428)
T PF13347_consen 26 YFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVW 105 (428)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHH
Confidence 3468889999999999776665555 45999999999 899877655 677888888887664311 1110111223
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHH
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFT 158 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~ 158 (433)
+++..++..++..+...+......+..+ ++|.+..+.-..+..+|..+.+
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~ 157 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLAS 157 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHH
Confidence 3344444566677777777778888886 4599988887776666664443
No 106
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.93 E-value=1.8e-08 Score=103.15 Aligned_cols=148 Identities=12% Similarity=0.007 Sum_probs=106.7
Q ss_pred hCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhch
Q 013969 42 LGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSS 120 (433)
Q Consensus 42 ~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~ 120 (433)
.+.+..+.+.+.+...+... ..++.|++.||+|+|+.+.++.++.++++.++.+. .+++.+.+...+.|++.
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-------~~~~~~~~~~~l~g~~~ 329 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-------TGPLEVSILKLLHAFEV 329 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-------ccHHHHHHHHHHHHHHH
Confidence 46777778887666656554 48899999999999999999999888877765431 23566666667777776
Q ss_pred hhhhhhHHHHHhhcccCC-chhHHHH-HHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 013969 121 AWLGTAVLVTNMRNFPLS-RGTVAGI-LKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFVRPCTP 196 (433)
Q Consensus 121 g~~~~~~~~~~~~~Fp~~-RG~a~gi-~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~~~ 196 (433)
+.........+.+++|++ |+++.+. .....++|+++.+++...+.+. +++..+...+++.++..++...++|++++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 330 PFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 666666667788899855 8877655 3455678888888888877764 55666666677776667777777777544
No 107
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.92 E-value=6.4e-08 Score=96.94 Aligned_cols=138 Identities=14% Similarity=0.151 Sum_probs=97.6
Q ss_pred hhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 28 AYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 28 ~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
.+.+..+.|. +++++|+++.+.+.+.....++.. ..++.|++.||+|+|+.+.++.++..++...+....... ...
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 299 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG--LGS 299 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc--cch
Confidence 4444455555 466899999999987766666665 489999999999999999999888877766654422111 112
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcCC
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNS 168 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~ 168 (433)
.+.+.....+.|+|.+..+........+.+|++||++.++.......++.+.+++.. ....+
T Consensus 300 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~ 361 (385)
T TIGR00710 300 WAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS-LIHGN 361 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH-hcccc
Confidence 333334455677777777777777778888988999999987776666777777766 44333
No 108
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.92 E-value=1.1e-11 Score=127.93 Aligned_cols=106 Identities=18% Similarity=0.195 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhh
Q 013969 48 QLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTA 126 (433)
Q Consensus 48 ~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~ 126 (433)
+.++..+...++..+ +++.|.+.||+|||+++.++.++..+|.++..+.... .+++.+.+.+++.|+|.|..+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY----NNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccc
Confidence 456677777788865 8999999999999999999999999988865442100 14677888899999999988888
Q ss_pred HHHHHhhccc-CCchhHHHHHHhhhhhHHHHH
Q 013969 127 VLVTNMRNFP-LSRGTVAGILKGYGGLSAAVF 157 (433)
Q Consensus 127 ~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~ 157 (433)
....+.|.-| ++||+...+...+..+|..+.
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~ 154 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLA 154 (451)
T ss_pred cccccccccccccccccccccccccccccccc
Confidence 8888889887 569999999888887776554
No 109
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.91 E-value=2.5e-08 Score=108.94 Aligned_cols=128 Identities=13% Similarity=0.095 Sum_probs=85.1
Q ss_pred HHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhc
Q 013969 56 NDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRN 134 (433)
Q Consensus 56 ~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~ 134 (433)
..++.+ ..+++|++.||+|||++++++.++.+++.+++.+. . +.+.+.+..++.|...+..+......++++
T Consensus 604 ~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-~------s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 604 GTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-N------SESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-c------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444 47999999999999999999999888887765542 1 123333334445544444555666788999
Q ss_pred ccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhc
Q 013969 135 FPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFV 191 (433)
Q Consensus 135 Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l~~~~~~ 191 (433)
||+ .||+++|+..+...+|+++.+.+...++.......+++.+++.+ ++.+...++
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~ll-l~~ll~~~L 733 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALA-CGGLLALKL 733 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHhC
Confidence 995 59999999999989999998877776665433333333344333 333333344
No 110
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.90 E-value=4.2e-08 Score=96.17 Aligned_cols=145 Identities=27% Similarity=0.325 Sum_probs=111.2
Q ss_pred hhhhhccHHHHHH-HhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchH-HHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 28 AYNFPLYSHSLKS-VLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWL-VLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 28 ~y~~s~~~~~l~~-~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~-~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
.+.+..+.|.+.+ .+|++..+.+.+.....++.. ..++.|++.||+|+|+ .+.++.++..+++..+... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~ 263 (352)
T cd06174 191 YYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA-------P 263 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-------c
Confidence 4455556666544 459999999998777777775 4899999999999999 9999999988888766542 1
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHH
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVG 179 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~ 179 (433)
+.+.+.+..++.|.+.+..+......+.+.+| ++||++.|+......+|..+.+.+...+.+. ++...+.+.+++
T Consensus 264 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~ 340 (352)
T cd06174 264 SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAAL 340 (352)
T ss_pred cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHH
Confidence 24566667777888888778788888999999 6699999999999999999988888888754 344444444443
No 111
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.89 E-value=5e-08 Score=101.51 Aligned_cols=134 Identities=14% Similarity=0.026 Sum_probs=85.9
Q ss_pred hhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 28 AYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 28 ~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
.+.+..+.|. +++++|+|..+.++......++.. ..+++|++.||+|+|+.+.++..+..++...+.... . .+
T Consensus 274 ~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~-~----~~ 348 (467)
T PRK09556 274 RIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH-A----TS 348 (467)
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh-c----Cc
Confidence 4455667776 567899999999887776666665 489999999999999887766554444332221111 1 12
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhh-HHHHHHHHHHHHhc
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGL-SAAVFTEIYNMLLH 166 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~gl-g~~i~~~l~~~~~~ 166 (433)
.+.+++..++.|...............+++|+ +||++.|+..+...+ |+++.+++...+.+
T Consensus 349 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 349 EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 34443444444432211111112445689995 599999999877665 66777777777766
No 112
>PRK03545 putative arabinose transporter; Provisional
Probab=98.89 E-value=6.7e-08 Score=97.90 Aligned_cols=151 Identities=15% Similarity=0.073 Sum_probs=98.4
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHH
Q 013969 37 SLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCV 115 (433)
Q Consensus 37 ~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 115 (433)
.+++++|+|..+.+.+.....++.. ..++.|++.||+|+|+. .++..+..++...+.. .. .+.+.++++.++
T Consensus 231 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~-~~-----~~~~~~~~~~~l 303 (390)
T PRK03545 231 FVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLP-AA-----NSEWHLSVLSIF 303 (390)
T ss_pred HHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHH-Hh-----chHHHHHHHHHH
Confidence 3577789999998887666656654 48889999999997764 4555555554443322 11 134555555566
Q ss_pred HHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 116 ATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 116 ~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
.|++.+.........+.+..|++||.+.|+..+...+|..+.+.+...+.+. +.+..+...+++.++..+......|+.
T Consensus 304 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
T PRK03545 304 WGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRRF 383 (390)
T ss_pred HHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcccc
Confidence 6666544333344556677888899999998888888888887777777764 445555555555555555555555544
No 113
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.88 E-value=5.5e-08 Score=98.59 Aligned_cols=154 Identities=17% Similarity=0.240 Sum_probs=100.4
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHH
Q 013969 33 LYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWI 111 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~ 111 (433)
.+.+.+.++.|++. .+.......++.. ..++.|++.||+|+|+.+.++.++.++++..+... ++.+.+.+
T Consensus 237 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 307 (399)
T PRK05122 237 TFITLYYAARGWDG--AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-------PSPWMALI 307 (399)
T ss_pred HHHHHHHHHccccc--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-------ccHHHHHH
Confidence 34455444556643 3443333344444 46889999999999999999888888877655431 12444555
Q ss_pred HHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHh
Q 013969 112 ALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMY 189 (433)
Q Consensus 112 ~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~ 189 (433)
..++.|++.+..+........+.+| ++||++.|+......+|..+.+++...+.+. +++..+.+.+++ .+++++...
T Consensus 308 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~-~~~~~~~~~ 386 (399)
T PRK05122 308 GAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALA-ALLGLALTW 386 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH-HHHHHHHHH
Confidence 6677888777666555566778888 5699999999988889988888887766653 444444444443 344455555
Q ss_pred hcccCCC
Q 013969 190 FVRPCTP 196 (433)
Q Consensus 190 ~~r~~~~ 196 (433)
++++.++
T Consensus 387 ~~~~~~~ 393 (399)
T PRK05122 387 LLYRRAP 393 (399)
T ss_pred Hhccccc
Confidence 5554433
No 114
>PRK09952 shikimate transporter; Provisional
Probab=98.88 E-value=1.1e-07 Score=98.33 Aligned_cols=164 Identities=11% Similarity=0.098 Sum_probs=98.3
Q ss_pred hhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 27 NAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 27 ~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
..|.+..+.|.+ ++++|++..+...+.....+.. ...++.|++.||+|+|+++.++.++..++...+...... ..
T Consensus 265 ~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~---~~ 341 (438)
T PRK09952 265 TMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA---QS 341 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc---CC
Confidence 355555566664 6778999876655443333333 347889999999999999988877665554433332211 11
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhh-hhhHHHHHHHHHHHHhc--CChhHHHHHHHHHH
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGY-GGLSAAVFTEIYNMLLH--NSSSKLLLVLAVGV 180 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~-~glg~~i~~~l~~~~~~--~~~~~~l~~~a~~~ 180 (433)
..+.+.+..++.+++.+.........+.+.||+ +|+++.|+.... ..+|+.+.+.+...+.+ ++.+........++
T Consensus 342 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~ 421 (438)
T PRK09952 342 IFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAG 421 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 233333344455566655555556778899995 599998885433 34677777777766665 22223333334444
Q ss_pred HHHHHHHHhhccc
Q 013969 181 PAVCLVMMYFVRP 193 (433)
Q Consensus 181 ~~v~l~~~~~~r~ 193 (433)
.+++.++.+.+|+
T Consensus 422 ~~i~~v~~~~~~~ 434 (438)
T PRK09952 422 CLISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHHHccc
Confidence 4555555555543
No 115
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.88 E-value=4.2e-08 Score=82.87 Aligned_cols=117 Identities=20% Similarity=0.194 Sum_probs=86.5
Q ss_pred HHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc
Q 013969 58 IGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP 136 (433)
Q Consensus 58 ~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp 136 (433)
++.. ..++.|++.||+|+|+.+.++.++..++.+.+... .+++.+.+..++.|++.+..+......+.+.+|
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3443 48899999999999999999998888877755431 235666667778888887777777788899998
Q ss_pred C-CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHH
Q 013969 137 L-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVP 181 (433)
Q Consensus 137 ~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~ 181 (433)
+ +|+++.++......+|..+.+.+...+.+. +++..+...+.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILAL 128 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHH
Confidence 5 599999999999889998887777766653 33333444444333
No 116
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.86 E-value=4.2e-08 Score=97.34 Aligned_cols=129 Identities=12% Similarity=-0.015 Sum_probs=92.2
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (433)
+.+++.+++|++..+.+.+.+...++.. ..++.|++.||+|+|+.+.++.+...++++.+... .. .+.+.++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~ 301 (377)
T TIGR00890 227 LYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFI-PM----LNDVLFLAT 301 (377)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHc-cc----chhHHHHHH
Confidence 4455667789999888887766666665 48999999999999999999988888887755432 11 112222233
Q ss_pred HHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 113 LCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 113 ~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
.++.|.+.+..+......+.+.+| ++||++.|+......+|.++.+.+...+.+.
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE 357 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344555555444444567788998 5699999999999899998888877776653
No 117
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.86 E-value=1.8e-07 Score=95.29 Aligned_cols=166 Identities=14% Similarity=0.066 Sum_probs=107.3
Q ss_pred hhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 28 AYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 28 ~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
.+.+..+.|.+ ++++|++..+.++......++.. ..++.|++.||+|+|+.+.++.++..++...+....... ..+
T Consensus 231 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~ 308 (406)
T PRK15402 231 LLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS--SHA 308 (406)
T ss_pred HHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc--ccc
Confidence 34444455654 67799999998876555545554 478899999999999999999888887777665432111 112
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH-
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVC- 184 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~- 184 (433)
++.+.+..++.|+|.+..+..........-|++||++.++......+|..+.+.+...+++...+......+++..++.
T Consensus 309 ~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 388 (406)
T PRK15402 309 YLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWL 388 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHH
Confidence 4444455566777776655444444444446789999999988888888888888887776433333333344333333
Q ss_pred HHHHhhcccCC
Q 013969 185 LVMMYFVRPCT 195 (433)
Q Consensus 185 l~~~~~~r~~~ 195 (433)
+....++|+.+
T Consensus 389 ~~~~~~~~~~~ 399 (406)
T PRK15402 389 LLVRIFLKDKP 399 (406)
T ss_pred HHHHHHhccCC
Confidence 34445555543
No 118
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.85 E-value=1.4e-07 Score=95.45 Aligned_cols=143 Identities=12% Similarity=0.102 Sum_probs=105.8
Q ss_pred hhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 30 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
.+..+.|.+.+++|++..+++.......+... ..++.|++.||+|+|+++.++.+...+.+..+... ++.|.
T Consensus 223 ~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------~~~~~ 295 (382)
T TIGR00902 223 AYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI-------EAFPL 295 (382)
T ss_pred HHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-------hhHHH
Confidence 33345566556799999999986666656654 48889999999999999999999999998866441 24677
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHH-hhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHH
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILK-GYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGV 180 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~-~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~ 180 (433)
+++..++-|+..+..+.+....+.+. | ++|+++.++.. ...|+|.++.+.+...+.+......++..+++.
T Consensus 296 ~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~~~ 368 (382)
T TIGR00902 296 IFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAIIA 368 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 77777888888888888888888887 7 46999999875 467888888887777776543233333444433
No 119
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.82 E-value=5.6e-08 Score=99.51 Aligned_cols=165 Identities=14% Similarity=0.147 Sum_probs=103.9
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCc---
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES--- 103 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~--- 103 (433)
.+....+.|.+.+++|++..+.+.......++. ...+++|++.||+|+|+.+.++.++.+++.+.+..........
T Consensus 300 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (481)
T TIGR00879 300 INAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSK 379 (481)
T ss_pred CeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCccc
Confidence 344456677788889999977777666555555 4588899999999999999999888877776655321111110
Q ss_pred -hhHHHHHH-HHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHH
Q 013969 104 -LPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVG 179 (433)
Q Consensus 104 -~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~ 179 (433)
.+...+.. ..+..+.+.+. .......+.+.+|+ +||++.|+......+|+++.+.+...+.+. ++...+.+.+++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~ 458 (481)
T TIGR00879 380 SSGNVAIVFILLFIAFFAMGW-GPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGL 458 (481)
T ss_pred chhHHHHHHHHHHHHHHHccc-cCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHH
Confidence 01222222 21222222221 12223455889985 699999999999999999988888877653 444444455555
Q ss_pred HHHHHHHHHhhccc
Q 013969 180 VPAVCLVMMYFVRP 193 (433)
Q Consensus 180 ~~~v~l~~~~~~r~ 193 (433)
+++.+++..++.++
T Consensus 459 ~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 459 NVLGLIFVYFFLPE 472 (481)
T ss_pred HHHHHHHHheeccc
Confidence 55555544444444
No 120
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.82 E-value=1.3e-07 Score=99.26 Aligned_cols=156 Identities=12% Similarity=0.133 Sum_probs=97.5
Q ss_pred HHHHHHHhCCCHHHHHHHH-HHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHH
Q 013969 35 SHSLKSVLGFNQHQLTMLG-VANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (433)
Q Consensus 35 ~~~l~~~~g~s~~~~~~i~-~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (433)
.|.+.+++|+|.++.+.+. ....++.. ..+++|++.||+|+|+.+.++.++.+++.+.++..... ..+.+.+...
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~---~~~~~~l~~~ 322 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT---DKNLYSMGAA 322 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHH
Confidence 3445678999999999875 45555654 48999999999999998887777666554443321111 1123333322
Q ss_pred HHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhh
Q 013969 113 LCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYF 190 (433)
Q Consensus 113 ~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~ 190 (433)
.++..+..++.+.+......+..|++ +++..|+..+..++|..+.+++...+.+. ++...+.+ ..+..+.+++...+
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~-~~~~~l~~l~~~~~ 401 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLF-SVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHH-HHHHHHHHHHHHHH
Confidence 33322222333344456667777754 89999999988899998888887777663 34443433 44444455555555
Q ss_pred cccC
Q 013969 191 VRPC 194 (433)
Q Consensus 191 ~r~~ 194 (433)
+|+.
T Consensus 402 ~~~~ 405 (491)
T PRK11010 402 CRQT 405 (491)
T ss_pred HHhc
Confidence 5543
No 121
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.81 E-value=1.3e-07 Score=97.80 Aligned_cols=167 Identities=15% Similarity=0.132 Sum_probs=97.8
Q ss_pred hhhhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHH-HhhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccC
Q 013969 25 AGNAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDI-GENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVE 102 (433)
Q Consensus 25 ~g~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~-~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~ 102 (433)
.|..-.++.+.|.+ ++++ +............+ +....|++|+|+||+|+|+++.++.+...++.+.+....... +
T Consensus 265 FG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~-~ 341 (462)
T PRK15034 265 FGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT-G 341 (462)
T ss_pred HHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc-c
Confidence 34444566566665 4433 44333222233223 345689999999999999999999987777665444333221 1
Q ss_pred chhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC----------------------CchhHHHHHHhhhhhHHHHHHHH
Q 013969 103 SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL----------------------SRGTVAGILKGYGGLSAAVFTEI 160 (433)
Q Consensus 103 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~----------------------~RG~a~gi~~~~~glg~~i~~~l 160 (433)
+.+++......+...+..|+.+.+..+.+.+.||+ +-|.+.|++.+.-++|+.+.|.+
T Consensus 342 ~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~ 421 (462)
T PRK15034 342 SGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQA 421 (462)
T ss_pred ccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHH
Confidence 12344333322222233444455566888899985 45789999988888999888888
Q ss_pred HHHHhc--CChhHHHHHHHHHHHHHHHHHH-hhcccC
Q 013969 161 YNMLLH--NSSSKLLLVLAVGVPAVCLVMM-YFVRPC 194 (433)
Q Consensus 161 ~~~~~~--~~~~~~l~~~a~~~~~v~l~~~-~~~r~~ 194 (433)
+..... +.....+....+..+++.++.+ .+.|+.
T Consensus 422 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~~ 458 (462)
T PRK15034 422 FGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRRK 458 (462)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 777664 3343334434444444444444 444443
No 122
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.81 E-value=5.4e-08 Score=97.19 Aligned_cols=137 Identities=16% Similarity=0.058 Sum_probs=91.1
Q ss_pred hhhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHH-HHHHHHHhcccC
Q 013969 26 GNAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGY-GVLWLAVSRTVE 102 (433)
Q Consensus 26 g~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~-~~~~~~~~~~~~ 102 (433)
...+.+..+.|.+ ++++|++..+.+.+.....++.. ..++.|++.||+|+|+.+.++..+..+.. ..+.. ...
T Consensus 233 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~--- 308 (394)
T TIGR00883 233 TTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA-LLD--- 308 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH-Hhc---
Confidence 3455666667775 57889999998886666666664 48899999999999998876655444332 22221 111
Q ss_pred chhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHH-HhhhhhHHHHHHHHHHHHhc
Q 013969 103 SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGIL-KGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 103 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~-~~~~glg~~i~~~l~~~~~~ 166 (433)
..+.+.+.+..++.|++.+..+.+....+.+.+|+ +|+++.|+. ..+..+|+.+.+.+...+.+
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 309 SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 11344444555666666666777778888999995 599998884 33344666676666666654
No 123
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=1.7e-07 Score=92.31 Aligned_cols=180 Identities=13% Similarity=0.005 Sum_probs=123.7
Q ss_pred CCCChHhHHHHHH-HHHHhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHH
Q 013969 8 SRPPWVGLGAAVW-VQIAAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLA 85 (433)
Q Consensus 8 ~~~~w~~l~~~~l-~~~~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l 85 (433)
.+.+|.....+.. .+.-.+-.-..+...|.+...+|.+..|..+++.....++.. +..+|.+.|++|+|+...+..+.
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~ 152 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLV 152 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHH
Confidence 3445655444333 333445556667888999999999999999999999999965 89999999999999998888776
Q ss_pred HHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 86 CFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 86 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
.++.-+ ..+. ++++..+++++.+.|.|.|. +......-.+.-| .+|++-+-.. ..+..|.++-..+.-..
T Consensus 153 t~v~~~-----is~~--spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~v 223 (528)
T KOG0253|consen 153 TGVFGV-----ISGA--SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGV 223 (528)
T ss_pred HHHHHH-----hhcC--CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHH
Confidence 665333 2332 46788888888888888876 4433444455557 5788876665 77777776555554444
Q ss_pred hcCChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 013969 165 LHNSSSKLLLVLAVGVPAVCLVMMYFVRPCTP 196 (433)
Q Consensus 165 ~~~~~~~~l~~~a~~~~~v~l~~~~~~r~~~~ 196 (433)
.++..|+|+++...+|+.+.....+.+.+-|.
T Consensus 224 m~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 224 MSNFGWRYLLFTSSTPLMFAARFLVWVYESPR 255 (528)
T ss_pred HHhhhHHHHHHHHHhHHHHHHHHHhhcccCcc
Confidence 45545556666555777666666666655444
No 124
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.78 E-value=2.2e-07 Score=97.05 Aligned_cols=120 Identities=13% Similarity=0.058 Sum_probs=75.7
Q ss_pred HHHHHhCCCHHHHHHHHHHHHHHh-hcccccccccc----ccCc-hHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHH
Q 013969 37 SLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASN----KFPP-WLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLW 110 (433)
Q Consensus 37 ~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~D----r~G~-r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~ 110 (433)
.+.+.+|++..+++.+....-+.- +..|+.|.++| |+|+ |+.+++|.+..++++.+++.. .+......++.++
T Consensus 32 yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~-p~~~~~~~~~~~~ 110 (473)
T PRK10429 32 YYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA-HLFEGTAQYVFVC 110 (473)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC-CCCCccHHHHHHH
Confidence 368889999999999766665555 45999999999 6699 556667888877776655431 1110111133333
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHH
Q 013969 111 IALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVF 157 (433)
Q Consensus 111 ~~~~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~ 157 (433)
+..++.+++..+...+......+.-+ ++|.+..+.-..+..+|+.+.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555566666666666667663 568888887555445555444
No 125
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.77 E-value=7.5e-08 Score=101.60 Aligned_cols=137 Identities=13% Similarity=0.060 Sum_probs=106.3
Q ss_pred HHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHh
Q 013969 40 SVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATN 118 (433)
Q Consensus 40 ~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 118 (433)
+.+..+.....+..+...+|..+ .++.|.++||+|||++++++.++..++-+..++ +++++.+++++++.|+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~-------a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF-------APNYWMFLIFRFLSGF 183 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH-------hCcHHHHHHHHHHHHh
Confidence 55666777777888888888865 889999999999999999999999887764444 2468899999999999
Q ss_pred chhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 013969 119 SSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (433)
Q Consensus 119 g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l 185 (433)
+.+..+......++++++ ++|+.+..+ ...+-.++.+.+++...+.+ +|+++.....+...+..+
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~~~~~~~~~~~~~ 249 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLFWIISIPSGLFLL 249 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHH
Confidence 998888888999999996 669999999 55555666666666666665 666666665555443333
No 126
>PRK03699 putative transporter; Provisional
Probab=98.77 E-value=1.5e-07 Score=95.70 Aligned_cols=150 Identities=9% Similarity=-0.038 Sum_probs=99.8
Q ss_pred hhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 27 NAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 27 ~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
..+.+..+.|.+ ++++|+|..+.+.+.+...++.. ..++.|++.||+|+|+++..+..+..+++..+.. ..
T Consensus 220 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~--~~----- 292 (394)
T PRK03699 220 AQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVN--TD----- 292 (394)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH--cC-----
Confidence 345666677775 57789999999887666556654 4788999999999999988877766665543322 11
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHH
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAV 183 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v 183 (433)
+.+.+.+..++.|++.+..+........+..|+++++..|.......+|+.+.+.+...+.+. +....+...+++.+++
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~ 372 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVV 372 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHH
Confidence 223333344455655555555555555666687788888888888889998888888777653 4444444444443333
No 127
>PRK12382 putative transporter; Provisional
Probab=98.76 E-value=1.6e-07 Score=95.08 Aligned_cols=154 Identities=18% Similarity=0.193 Sum_probs=102.8
Q ss_pred hhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 30 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
....+.+.+.++.+++.. +.......++.. ..++.|++.||+|+|+.+.++.++.+++++.+... ++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 304 (392)
T PRK12382 234 VIGTFVSLYFASKGWAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA-------PTAWV 304 (392)
T ss_pred HHHHHHHHHHHhcCCchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-------ccHHH
Confidence 334455555556677653 333333334443 47899999999999999999998888887754431 12445
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHH
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLV 186 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~ 186 (433)
+.+..++.|++.+..+......+.+.+| ++||++.|+..+...+|.++.+++...+.+. ++...+.+.+++.++..++
T Consensus 305 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 384 (392)
T PRK12382 305 ALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIV 384 (392)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 5556667777777666655666788887 6699999999998889999988888877763 4555555555544444433
Q ss_pred HHhhcc
Q 013969 187 MMYFVR 192 (433)
Q Consensus 187 ~~~~~r 192 (433)
...+.|
T Consensus 385 ~~~~~~ 390 (392)
T PRK12382 385 TILSFR 390 (392)
T ss_pred HHhhcc
Confidence 333333
No 128
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.74 E-value=6.8e-07 Score=89.60 Aligned_cols=158 Identities=12% Similarity=0.155 Sum_probs=91.5
Q ss_pred hhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 29 YNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 29 y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
+.+..+.|. +.+++|++..+.+.+.....++.. ..++.|++.||+|+|+++.++.++..+....+...... ..++
T Consensus 211 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 287 (377)
T PRK11102 211 FSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---DLGF 287 (377)
T ss_pred HHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH---hhhH
Confidence 333334444 567789999999987666666664 48999999999999999998887654432222211111 1124
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhh-hhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHH
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGY-GGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCL 185 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~-~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l 185 (433)
+.+.+...+.+.+.+..+......+.+..|++||.+.++.... +++|+.+.+.+ ......+.+.++...++ +.++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~-~~~~~~~~~~~~~~~~~-~~~~~~ 365 (377)
T PRK11102 288 WALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALL-SLAPFTSAWPMVWSMAF-CSILSI 365 (377)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHH-HhccCCChHHHHHHHHH-HHHHHH
Confidence 4433333333333444444455666777898899999987553 45666554433 33333344444444443 333444
Q ss_pred HHHhhc
Q 013969 186 VMMYFV 191 (433)
Q Consensus 186 ~~~~~~ 191 (433)
+..++.
T Consensus 366 ~~~~~~ 371 (377)
T PRK11102 366 LFYLYA 371 (377)
T ss_pred HHHHHh
Confidence 444443
No 129
>PRK15075 citrate-proton symporter; Provisional
Probab=98.72 E-value=3.7e-07 Score=94.07 Aligned_cols=136 Identities=14% Similarity=0.127 Sum_probs=81.9
Q ss_pred hhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHH-HHHHHHHHHhcccCc
Q 013969 27 NAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFF-GYGVLWLAVSRTVES 103 (433)
Q Consensus 27 ~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~-g~~~~~~~~~~~~~~ 103 (433)
..+....+.|.+ ++.+|++..+.+++.....++.. ..++.|++.||+|+|++..++.+...+ ++..+......
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~---- 328 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAA---- 328 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcC----
Confidence 355666677875 55689999988877666666654 488899999999999998877654433 22221111111
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHh-hhhhHHHHHHHHHHHHhc
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKG-YGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~-~~glg~~i~~~l~~~~~~ 166 (433)
+++..+.+...+.+++.+...........+.+|+ .||++.|+... +..+++.+.+.+...+.+
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 329 PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 1222222222233334443333344567889985 59999998543 333446566666655544
No 130
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.71 E-value=2.7e-07 Score=95.75 Aligned_cols=129 Identities=16% Similarity=0.100 Sum_probs=85.3
Q ss_pred hhccHHHHHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHH
Q 013969 31 FPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (433)
Q Consensus 31 ~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l 109 (433)
...|.|.+.++.|++..+..+......+.. ...+++|++.||+|+|+++.++.++.+++++.+....... ..+.+.+
T Consensus 290 ~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~--~~~~~~~ 367 (479)
T PRK10077 290 VLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ--APGIVAL 367 (479)
T ss_pred HHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcC--cccHHHH
Confidence 345667787889998776666544444444 3478999999999999999999999998887765433221 1112221
Q ss_pred HHHHHHHHhchhhhh-hhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHH
Q 013969 110 WIALCVATNSSAWLG-TAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYN 162 (433)
Q Consensus 110 ~~~~~l~g~g~g~~~-~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~ 162 (433)
...++.+.+.+..+ +.....+.+.||+ +||++.|+..+...+|+.+.+.++.
T Consensus 368 -~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 368 -LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred -HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 12222333333222 2335778899994 5999999988887788877665554
No 131
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.70 E-value=2.4e-07 Score=97.30 Aligned_cols=134 Identities=19% Similarity=0.175 Sum_probs=102.9
Q ss_pred hhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 28 AYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 28 ~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
.+.+..+.|. +++.+|+|..+.+.......++.. ..++.|++.||+|+|+++..|.++.++++..+... .. ..+
T Consensus 275 ~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~-~~---~~~ 350 (495)
T PRK14995 275 LVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT-DF---STQ 350 (495)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh-cC---CCc
Confidence 3444445555 577899999999997776667765 58999999999999999999998888887765542 11 123
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
.+..+.+.++.|+|.+..+.+....+.+..| +++|.+.++......+|+++.+.+...++
T Consensus 351 ~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 351 QWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566778888888887777788888888 56999999999888899988877776655
No 132
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.68 E-value=5.7e-07 Score=91.93 Aligned_cols=136 Identities=20% Similarity=0.157 Sum_probs=86.0
Q ss_pred hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 26 GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 26 g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
+..+.+..+.|.+.++.|++..+.+.+.+...++.. ..++.|++.||+|+|+...++.++..++.+.+... .. .
T Consensus 245 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~----~ 319 (426)
T PRK12307 245 GANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI-PQ----D 319 (426)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-cc----c
Confidence 334445556677666789999888876666556664 48899999999999999998888776665543321 11 1
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+.+.+.++.+..+.+...........+.+.||+ +||++.|+......+|+.+.+.+...+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 320 NYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred cHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 122221111111111111112223556899995 59999999888888888777766666554
No 133
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.68 E-value=1.2e-06 Score=88.56 Aligned_cols=124 Identities=12% Similarity=0.008 Sum_probs=85.9
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (433)
+.|.+.++.|.+.++.+.+.....++.. ..++.|++.||+|+|+++.++.++..++...+. .. ..+ ...
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~----~~~---~~~ 291 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQ----AAM---APA 291 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hh----HHH---HHH
Confidence 4566666789999998886665556654 488899999999999999888888777665332 11 111 112
Q ss_pred HHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 113 LCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 113 ~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
..+.|.+....++.....+.+..|+ +++.+.+.....+++|+++.+.+...+.+.
T Consensus 292 ~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~ 347 (381)
T PRK03633 292 LFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN 347 (381)
T ss_pred HHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333444444455566667888885 577777777777889999988888877654
No 134
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.67 E-value=2.5e-07 Score=96.09 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=101.8
Q ss_pred hhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 29 YNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 29 y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
+....+.|. +++.+|++..+.+++.....++.. ..++.|++.||+|+|+++.+|.++.++++..+...... ..++
T Consensus 272 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~ 348 (485)
T TIGR00711 272 YGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP---DTPF 348 (485)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC---CCCH
Confidence 333445555 466789999999987776667665 58999999999999999999998888887765421211 1235
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+.+....++.|+|.+..+.+......+.+| ++||.+.|+......+|+++.+.+...++.
T Consensus 349 ~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 349 LAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555677888888777677777778888 569999999999988999998888777653
No 135
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.67 E-value=4.4e-07 Score=94.73 Aligned_cols=131 Identities=12% Similarity=0.114 Sum_probs=87.5
Q ss_pred hhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 31 FPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 31 ~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
...+.|.+ ++++|++..+.+.+.+...++.. ..++.|++.||+|+|+++.++.++..++.+.+.. .. ..+.+.
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~ 368 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA-IG----GANVWV 368 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh-cc----ccHHHH
Confidence 34566775 46899999999997777777765 4899999999999999998887766655543322 11 122333
Q ss_pred HHHHHHHH-HhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 109 LWIALCVA-TNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 109 l~~~~~l~-g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
+.+..++. +.+.+. .......+.+.+| ++||++.|+..+...+|+.+.+.+...+.+.
T Consensus 369 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 369 LGLLLFFQQMLGQGI-SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred HHHHHHHHHHHhccc-chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 33322222 222221 2233456788898 4699999998888889888877766666553
No 136
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.2e-06 Score=88.28 Aligned_cols=160 Identities=14% Similarity=0.070 Sum_probs=112.5
Q ss_pred hhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCc
Q 013969 25 AGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 25 ~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
.|..-.|+...|.+++..|+|.++++++.....++..+ ..++|++.|| ++|+.+....++..+.++.+.+. .
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~--~---- 297 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFT--G---- 297 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHh--c----
Confidence 45455566677889999999999999988777788755 8999999999 99999999988888887766553 1
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHH
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAV 183 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v 183 (433)
.+.+......++.|+..+..-..-..-.++..|+.++.+.++..+.+++|-++.+.+....++.....+....+.+..++
T Consensus 298 ~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~ 377 (394)
T COG2814 298 ASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLL 377 (394)
T ss_pred chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Confidence 12344444444455444433333345556656799999999999999999999888888888764444444444444444
Q ss_pred HHHHHhhc
Q 013969 184 CLVMMYFV 191 (433)
Q Consensus 184 ~l~~~~~~ 191 (433)
+++..+..
T Consensus 378 a~~~~~~~ 385 (394)
T COG2814 378 ALLLALLS 385 (394)
T ss_pred HHHHHHHH
Confidence 44444333
No 137
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.66 E-value=1.2e-06 Score=89.13 Aligned_cols=132 Identities=12% Similarity=0.089 Sum_probs=91.6
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..+....+.|++.+++|++..+.+...+...++.. ..++.|++.||+|+|+...++..+..+++..+.. ... +
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~-~~~-----~ 293 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIW-LPL-----Q 293 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH-ccc-----h
Confidence 34455567777656689999999987776667765 4889999999999999999988877777665432 111 1
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
...+. ..+.|++.+..+........+.++ ++||++.|+......+++.+.+.+...+.+
T Consensus 294 ~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~ 354 (393)
T PRK09705 294 LPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRS 354 (393)
T ss_pred HHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11121 233455665555555555566664 359999999888877888777777777665
No 138
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.66 E-value=4.1e-07 Score=91.20 Aligned_cols=162 Identities=16% Similarity=0.144 Sum_probs=111.0
Q ss_pred HHhhhhhhhhccHHH-HHHHhCCCHHHHHHHHHHH-HHHhhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcc
Q 013969 23 IAAGNAYNFPLYSHS-LKSVLGFNQHQLTMLGVAN-DIGENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRT 100 (433)
Q Consensus 23 ~~~g~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~-~~~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~ 100 (433)
.+.|..-.++.+.|. ++++|+.+..+.+.+.... .++...=|.+|+|+||+|.||++.+..+.+.++...........
T Consensus 229 ~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~ 308 (417)
T COG2223 229 ATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGF 308 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccc
Confidence 345666667777777 5999999999998865544 44456689999999999999999999998888777665532221
Q ss_pred cCchhHHH----HHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC--ChhHHHH
Q 013969 101 VESLPYWL----LWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN--SSSKLLL 174 (433)
Q Consensus 101 ~~~~~~~~----l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~--~~~~~l~ 174 (433)
....+.+. +....+..|+|+|..| +.+...||++-|.+.|++.+.-++|+...+.......+. +....+.
T Consensus 309 ~~~~~~~~~~~~~l~l~~~~G~GnGsvf----k~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~ 384 (417)
T COG2223 309 GHGGSFVVFVAVFLALFVFAGLGNGSVF----KMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFM 384 (417)
T ss_pred ccCcchHHHHHHHHHHHHHhccCcchhe----eechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHH
Confidence 10011222 2224555667776554 789999999999999999999999997777777666642 3444444
Q ss_pred HHHHHHHHHHHHHH
Q 013969 175 VLAVGVPAVCLVMM 188 (433)
Q Consensus 175 ~~a~~~~~v~l~~~ 188 (433)
+.....++..+...
T Consensus 385 ~~~~~~~~a~v~~~ 398 (417)
T COG2223 385 LLLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444333
No 139
>PRK11043 putative transporter; Provisional
Probab=98.65 E-value=1.8e-06 Score=87.65 Aligned_cols=138 Identities=16% Similarity=0.130 Sum_probs=92.4
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..+.+..+.|.+.+++|++..+.++......++.. .+.+.+++.||+|+|+....+.+..+++...+....... .+.
T Consensus 218 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 295 (401)
T PRK11043 218 AFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS--HPS 295 (401)
T ss_pred HHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc
Confidence 34455556677777799999999886555445554 377889999999999987777666665544433321111 112
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
++.+.+...+.|.+.+..+........+.+|++||++.|+..+....++.+.+++...+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 296 LVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 3434444455666677677666666677789999999999988766677777777766655
No 140
>PRK10504 putative transporter; Provisional
Probab=98.65 E-value=8.5e-07 Score=92.08 Aligned_cols=129 Identities=16% Similarity=0.117 Sum_probs=92.4
Q ss_pred ccHHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHH
Q 013969 33 LYSHSL-KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLW 110 (433)
Q Consensus 33 ~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~ 110 (433)
.+.|.+ +..+|.+..+.++......++... .++.|++.||+|+|+++.++.++.+++..++.... . ..+.+.+.
T Consensus 282 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~ 357 (471)
T PRK10504 282 FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVA-L---LGWYYLLP 357 (471)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcc-c---cccHHHHH
Confidence 344444 556899999998876666666544 68899999999999999999998888766554321 1 11233333
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 111 IALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 111 ~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+..++.|++.+..+.+......+.+|+ .||.+.|+......+|.++.+.+...++
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667777777777778888985 5999999988888888877777666555
No 141
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.65 E-value=3.3e-07 Score=92.19 Aligned_cols=128 Identities=18% Similarity=0.108 Sum_probs=86.7
Q ss_pred ccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHH
Q 013969 33 LYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLW 110 (433)
Q Consensus 33 ~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~ 110 (433)
.+.|. +++++|++..+.+.+.....++.. ..++.|++.||+|+|+.+.++.+...+....... . . .+.+.+.
T Consensus 259 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~-~----~~~~~~~ 332 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFA-I-G----ANVAVLG 332 (405)
T ss_pred hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHH-h-C----CchHHHH
Confidence 34444 567899999999987766666665 4899999999999999998887765443322211 1 1 1233333
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 111 IALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 111 ~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+..++.+...+..+......+.+.+| ++||++.|+......+|+.+.+++...+.+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 333 LGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred HHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33233333232233344566788998 469999999988888999888888877765
No 142
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.64 E-value=7.4e-07 Score=88.59 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=89.7
Q ss_pred hhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHH-HHHHHHHHHHHHH--HHHhcccC
Q 013969 28 AYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFI-GSLACFFGYGVLW--LAVSRTVE 102 (433)
Q Consensus 28 ~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~i-g~~l~~~g~~~~~--~~~~~~~~ 102 (433)
.+.+..+.|. +++++|++..+.+.+.....++.. ..++.|++.||+|+|+.... ......++.+... ......
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 308 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY-- 308 (399)
T ss_pred HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc--
Confidence 3444445555 467789999999887766666664 58999999999999961111 1111111111111 001111
Q ss_pred chhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-C-hhHHHHHHHHH
Q 013969 103 SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-S-SSKLLLVLAVG 179 (433)
Q Consensus 103 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~-~~~~l~~~a~~ 179 (433)
....+.......+.+.+.+ .+........+.+|+ +||++.|+.....++|+.+.+.+...+.+. + +...+.+.+++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~ 387 (399)
T TIGR00893 309 VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAAL 387 (399)
T ss_pred chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHH
Confidence 1123333333333444444 455667788999985 599999999999899999988888877764 3 44444444443
No 143
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.64 E-value=2.3e-06 Score=86.55 Aligned_cols=126 Identities=14% Similarity=0.071 Sum_probs=79.1
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHH
Q 013969 36 HSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALC 114 (433)
Q Consensus 36 ~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (433)
|.+++.+|++..+.+++.+...++.. ..++.|++.||+|+|+.+.++.++.+++++.+... .. +.+...+..+
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~-~~-----~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF-GG-----MKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHH-Hh-----hHHHHHHHHH
Confidence 34566789999999987776666665 48999999999999999999988888877654331 11 1233333333
Q ss_pred HHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 115 VATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 115 l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
+.+.|......+......+..+++|..+.+.......+|.++.+.+...+++.
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHc
Confidence 34444332333333334444433333333333455678998888888877763
No 144
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.63 E-value=1.6e-06 Score=87.76 Aligned_cols=128 Identities=10% Similarity=0.041 Sum_probs=92.5
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHH
Q 013969 33 LYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWI 111 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~ 111 (433)
.+.|.+.++.|++..+.+.+.....++.. ..++.|++.||+|+|+++.++.+..+++++.+... .++|.+.+
T Consensus 226 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~ 298 (382)
T PRK11128 226 GFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST-------TALPWLIV 298 (382)
T ss_pred HHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-------hhHHHHHH
Confidence 34455556789999999886666656554 47899999999999999999998888877654331 23566666
Q ss_pred HHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHH-hhhhhHHHHHHHHHHHHhcC
Q 013969 112 ALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILK-GYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 112 ~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~-~~~glg~~i~~~l~~~~~~~ 167 (433)
..++.|++.+..+......+.+.-|++++++.++.. ...++|.++.+.+...+.+.
T Consensus 299 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 299 IQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777778777776666666677775677899888875 44556666777666666654
No 145
>PRK09848 glucuronide transporter; Provisional
Probab=98.62 E-value=1.3e-06 Score=90.39 Aligned_cols=119 Identities=8% Similarity=0.008 Sum_probs=69.1
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhh-cccccccccccc----CchHHH-HHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 35 SHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKF----PPWLVL-FIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 35 ~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~----G~r~~~-~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
...+++.+|++..+++.+.+...+... ..|+.|+++||. |+||.. .++.+...+...+++............+.
T Consensus 32 ~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (448)
T PRK09848 32 LSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVY 111 (448)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHH
Confidence 345788899999999998777777765 599999999996 667754 66666555544433221111111112223
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhcc--cCCchhHHHHHHhhhhhH
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNF--PLSRGTVAGILKGYGGLS 153 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~F--p~~RG~a~gi~~~~~glg 153 (433)
.+....+.+++.++...+......+.- |++|.+..+.-..+..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~ 158 (448)
T PRK09848 112 AYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLT 158 (448)
T ss_pred HHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHH
Confidence 333334556666666555444434333 345877766544333333
No 146
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.62 E-value=2.1e-06 Score=89.45 Aligned_cols=183 Identities=10% Similarity=0.039 Sum_probs=108.0
Q ss_pred ChHhHHHHHHHHHHhhhhhhhhc---cHHHHHHHhCCCHHHHHHHHHHHHHHh-hcccccccccc----ccCchHHHHHH
Q 013969 11 PWVGLGAAVWVQIAAGNAYNFPL---YSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASN----KFPPWLVLFIG 82 (433)
Q Consensus 11 ~w~~l~~~~l~~~~~g~~y~~s~---~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~D----r~G~r~~~~ig 82 (433)
+|.++..+... .|..+.|++ +.+++.+++|.++.+.+.+.....+.. ...|+.|+++| |+||||..+++
T Consensus 3 ~~~li~~~~~~---~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~ 79 (477)
T TIGR01301 3 LRKLLRVASVA---AGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAA 79 (477)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHH
Confidence 45554444332 333444443 334467889999999999776666665 56999999999 59999998875
Q ss_pred -HHHHHHHHHHHHHHHhc------cc-CchhH---HHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-c--hhHHHHHHh
Q 013969 83 -SLACFFGYGVLWLAVSR------TV-ESLPY---WLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-R--GTVAGILKG 148 (433)
Q Consensus 83 -~~l~~~g~~~~~~~~~~------~~-~~~~~---~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-R--G~a~gi~~~ 148 (433)
.+...++++++...-.- .. ..... +...+...+..++......+.-..+.+.+|++ | +.+.++...
T Consensus 80 g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 80 GAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred HHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 55555565655431100 00 00001 11122222334456666777788899999843 3 688998888
Q ss_pred hhhhHHHHHHHHHHHH-----hc-----------CChhHHHHHHHHHHHHHHHHHHhhcccCCC
Q 013969 149 YGGLSAAVFTEIYNML-----LH-----------NSSSKLLLVLAVGVPAVCLVMMYFVRPCTP 196 (433)
Q Consensus 149 ~~glg~~i~~~l~~~~-----~~-----------~~~~~~l~~~a~~~~~v~l~~~~~~r~~~~ 196 (433)
..++|+.+...+.... ++ .+.+..+.+.+++.++..++..+++|+.|+
T Consensus 160 ~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 160 FMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 8888887776554321 11 022333444444444455566677787654
No 147
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.61 E-value=1.5e-06 Score=87.95 Aligned_cols=130 Identities=12% Similarity=0.015 Sum_probs=84.5
Q ss_pred HHHHHHhCCCHHHHHHHHHHHH-HHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHH
Q 013969 36 HSLKSVLGFNQHQLTMLGVAND-IGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIAL 113 (433)
Q Consensus 36 ~~l~~~~g~s~~~~~~i~~~~~-~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 113 (433)
+.+.++.|++.++++.+..... +.... .+++|++.||+|+|+++.++.++.+........ .......++.+.++...
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFA-QAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-HHHcccCCcHHHHHHHH
Confidence 4444568999999998655443 34444 678999999999999998887766443332221 11110011223333333
Q ss_pred HHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 114 CVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 114 ~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
.+.+++.+..+.+......+..+ +++|++.++..+..++|..+.+.+...+.+
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~ 365 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD 365 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455555555566667764 458999999999999999998888777765
No 148
>TIGR00895 2A0115 benzoate transport.
Probab=98.60 E-value=6.1e-07 Score=89.82 Aligned_cols=130 Identities=18% Similarity=0.136 Sum_probs=91.2
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
..+....+.|.+.+++|++..+.+.+.....++.. ..++.|++.||+|+|+......+.....+.... . . .+
T Consensus 265 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-----~~ 337 (398)
T TIGR00895 265 GVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGS-T-L-----FS 337 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH-H-h-----hC
Confidence 34455566777888999999999887766666665 489999999999999554443333333333222 1 1 12
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNM 163 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~ 163 (433)
.+.+++..++.|++.+..+......+.+.+|+ +||++.|+..+...+|.++.+.+...
T Consensus 338 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 338 PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 34445556667777777777778889999995 59999999988888888887666543
No 149
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.60 E-value=3.5e-06 Score=88.97 Aligned_cols=125 Identities=15% Similarity=0.103 Sum_probs=93.6
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
+..+..=|...++++..+..+-.. +++++|.++||+.+|++++.+-++.++....+....... ..++|.++++.++.
T Consensus 36 lv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~--~~~~~~Ll~~~fl~ 113 (524)
T PF05977_consen 36 LVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFG--LLSPWLLLILTFLL 113 (524)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhC--cCCHHHHHHHHHHH
Confidence 344555677888888888777775 599999999999999999999988776555544322221 23478888888899
Q ss_pred HhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 117 TNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
|++.++..++-...+.+..|+ +...|.++....++++-.+.+.+...+
T Consensus 114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~L 162 (524)
T PF05977_consen 114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGIL 162 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 988888777778888999995 578888888877777776665554433
No 150
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.59 E-value=1.1e-06 Score=91.04 Aligned_cols=161 Identities=16% Similarity=0.066 Sum_probs=86.5
Q ss_pred hhhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-cccccccccccc--CchHHH-HHHHHHHHHHHHHHHHHHhcc
Q 013969 26 GNAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKF--PPWLVL-FIGSLACFFGYGVLWLAVSRT 100 (433)
Q Consensus 26 g~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~--G~r~~~-~ig~~l~~~g~~~~~~~~~~~ 100 (433)
...|.+..+.|.+ ++++|++..+.+.+.....++.. ..++.|++.||+ |+|+.. .....+..++...++.. ..
T Consensus 267 ~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~-~~- 344 (452)
T PRK11273 267 LLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN-PA- 344 (452)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh-cc-
Confidence 3456666777885 66689999998886666656665 488999999999 555432 22223333343333221 11
Q ss_pred cCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHH-HHHHHHHhcC-ChhHHHHHHH
Q 013969 101 VESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVF-TEIYNMLLHN-SSSKLLLVLA 177 (433)
Q Consensus 101 ~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~-~~l~~~~~~~-~~~~~l~~~a 177 (433)
.+.+...+...+.|.+.............+.+|+ +||++.|+......+|+.+. +.+...+.+. ++...+...+
T Consensus 345 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~ 421 (452)
T PRK11273 345 ---GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMI 421 (452)
T ss_pred ---cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHH
Confidence 1122222222222222111111112345688985 59999999877666777665 4555555543 3434444444
Q ss_pred HHHHHHHHHHHhhcc
Q 013969 178 VGVPAVCLVMMYFVR 192 (433)
Q Consensus 178 ~~~~~v~l~~~~~~r 192 (433)
++ .+++++....++
T Consensus 422 ~~-~~~~~~~~~~~~ 435 (452)
T PRK11273 422 GG-SILAVILLIVVM 435 (452)
T ss_pred HH-HHHHHHHHHHHh
Confidence 43 334444444333
No 151
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.58 E-value=1.7e-06 Score=87.57 Aligned_cols=136 Identities=12% Similarity=-0.011 Sum_probs=89.2
Q ss_pred HHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHH
Q 013969 52 LGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVT 130 (433)
Q Consensus 52 i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~ 130 (433)
+.....++. ...++.|++.||+|+|+++.++.+...++.+.+... .+.+.+++..++.|++.+..+......
T Consensus 263 ~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 335 (408)
T PRK09874 263 IASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV-------QTPLQLGILRFLLGAADGALLPAVQTL 335 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhhHhhHHHHHHH
Confidence 333333444 347888999999999999999888777666543321 124555556667777777766666666
Q ss_pred Hhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 131 NMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 131 ~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
+.+..| ++||++.|+......+|.++.+.+...+.+. +++..+...+++.++..+...+..|..
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 336 LVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred HHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667777 5699999998888889988877776666653 444444455554444444444444433
No 152
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.57 E-value=7.2e-07 Score=88.19 Aligned_cols=127 Identities=14% Similarity=0.018 Sum_probs=95.2
Q ss_pred ccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHH
Q 013969 33 LYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLW 110 (433)
Q Consensus 33 ~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~ 110 (433)
.+.|.+ ++.+|++..+.+.+.....++.. ..++.|++.||+|+|+++.++.++.++++..+... . . +.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~-~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT--P---P-NFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--c---h-hHHHHH
Confidence 345555 44589999999987776666665 48889999999999999988877777766644431 1 1 255556
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 111 IALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 111 ~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+..++.|++.+..+......+.+.+|+ +||++.|+......++..+.+.+...+.
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777888877777777888999985 5999999999988888888776666544
No 153
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.56 E-value=3.2e-06 Score=86.10 Aligned_cols=143 Identities=13% Similarity=-0.026 Sum_probs=94.4
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHH-HHHHHHHHHhcccCchhHHHHHHH
Q 013969 35 SHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFF-GYGVLWLAVSRTVESLPYWLLWIA 112 (433)
Q Consensus 35 ~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~-g~~~~~~~~~~~~~~~~~~~l~~~ 112 (433)
.|.+.+++|++..+.+.+.....++.. ..++.|++.||.+ |+...++.++..+ ++++... . .+.+.+.+.
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~--~-----~~~~~~~~~ 311 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLW--G-----SDKIVATGV 311 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHH--h-----hhHHHHHHH
Confidence 355778899999998886666666664 4789999999965 4444444444333 3332221 1 124555566
Q ss_pred HHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHH
Q 013969 113 LCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCL 185 (433)
Q Consensus 113 ~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l 185 (433)
.++.|++.+..+....+.+.+..|++++++.++..+...+|..+.+.+...+++. +....+.+.+++.++.++
T Consensus 312 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 312 AIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 6677877777776667778888898888888888788888988888888888764 333334444443334433
No 154
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.55 E-value=1.1e-06 Score=91.86 Aligned_cols=160 Identities=9% Similarity=-0.054 Sum_probs=87.2
Q ss_pred hhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchH-------HHHHHHHHHHHHHHHHHHHHhc
Q 013969 29 YNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWL-------VLFIGSLACFFGYGVLWLAVSR 99 (433)
Q Consensus 29 y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~-------~~~ig~~l~~~g~~~~~~~~~~ 99 (433)
+.+..+.|. +.+++|++..+.+.+.+...++.. ..+++|++.||+|+|+ ...+..++.++..+.+. ..
T Consensus 269 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~--~~- 345 (476)
T PLN00028 269 LTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLG--RA- 345 (476)
T ss_pred HHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhc--cc-
Confidence 333444555 467789999999887766666664 5899999999998762 22222222222222111 11
Q ss_pred ccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHH
Q 013969 100 TVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVG 179 (433)
Q Consensus 100 ~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~ 179 (433)
.+.+...+..++.+.+.+..+........+..|++||++.|+...+..+|+.+.+.+...--..++...+.+. .+
T Consensus 346 ----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~-~~ 420 (476)
T PLN00028 346 ----NSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLM-GV 420 (476)
T ss_pred ----chHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHH-HH
Confidence 1223322233333333332232223344455678899999998777778887776654311011233333333 33
Q ss_pred HHHHHHHHHhhcccCCC
Q 013969 180 VPAVCLVMMYFVRPCTP 196 (433)
Q Consensus 180 ~~~v~l~~~~~~r~~~~ 196 (433)
..+++.+..+++|.+.+
T Consensus 421 ~~~i~~~~~~~~~~~~~ 437 (476)
T PLN00028 421 MIIACTLPVAFIHFPQW 437 (476)
T ss_pred HHHHHHHHHHheeccch
Confidence 44556666677764433
No 155
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.55 E-value=1e-06 Score=92.58 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=84.1
Q ss_pred hhhhhhccHHHHHHHhCCCHHHHHH------------HHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHH
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQLTM------------LGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVL 93 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~~~------------i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~ 93 (433)
..|....+.|.+.++.|++..+.+. ......++.. ..++.|++.||+|||++++++.++.+++..++
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 4567777888887788887542211 1122222333 35778999999999999999888877766655
Q ss_pred HHHHhcccCchhHHHHHH-HHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 94 WLAVSRTVESLPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 94 ~~~~~~~~~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
....... +......++. +....+.|. .........+.||.+ |+++.|+..+...+++.+.+.+...+++
T Consensus 383 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 383 GFAYNHL-STHGFLAIYVLAQFFANFGP---NATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHHHHhc-chhHHHHHHHHHHHHHhcCC---CchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence 4432111 1111111111 111222222 112233458999965 9999999999888999888888877765
No 156
>PRK11462 putative transporter; Provisional
Probab=98.55 E-value=5.5e-06 Score=86.29 Aligned_cols=120 Identities=8% Similarity=-0.062 Sum_probs=77.1
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHh-hccccccccccc----cCchHHHH-HHHHHHHHHHHHHHHHHhcccCchhHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNK----FPPWLVLF-IGSLACFFGYGVLWLAVSRTVESLPYWLLWI 111 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr----~G~r~~~~-ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~ 111 (433)
+.+..|++...++.+....-+.- +.-|+.|.++|| +|+||..+ +|.+.+++++++++.. .+......++.+++
T Consensus 36 yt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~-p~~s~~~~~~y~~~ 114 (460)
T PRK11462 36 YTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST-PDLSMNGKMIYAAI 114 (460)
T ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC-CCCCcchHHHHHHH
Confidence 57889999999998766665555 458999999996 79876655 5767887777665542 11111111223333
Q ss_pred HHHHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHH
Q 013969 112 ALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFT 158 (433)
Q Consensus 112 ~~~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~ 158 (433)
...+..++..+...|-.....+.-+ ++|.+..+.-..+..+|+.+.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~ 163 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLST 163 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555555555566666554 5699999987776666655543
No 157
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.53 E-value=2.9e-06 Score=87.50 Aligned_cols=161 Identities=14% Similarity=0.133 Sum_probs=92.7
Q ss_pred hhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-cccccccccccc--CchHHH-HHHHHHHHHHHHHHHHHHhcccCc
Q 013969 29 YNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKF--PPWLVL-FIGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 29 y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~--G~r~~~-~ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
+.+..+.|.+ ++++|++..+.+...+...++.. ..++.|++.||+ +.|+.. ....+...+....+.. ...
T Consensus 260 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~---- 334 (434)
T PRK11663 260 AAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWL-MPF---- 334 (434)
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHH-ccc----
Confidence 3445566665 57789999999887666666665 489999999998 333332 2222222222222111 111
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHH
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVP 181 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~ 181 (433)
.+.+.+.+..+..|.+.............+.+| ++||+++|+......+|+++.+++...+.+. ++...+...+++.+
T Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~ 414 (434)
T PRK11663 335 ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAG 414 (434)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHH
Confidence 112222222222232211111111234578897 5699999999999889999998888877763 45555566666555
Q ss_pred HHHHHHHhhcccC
Q 013969 182 AVCLVMMYFVRPC 194 (433)
Q Consensus 182 ~v~l~~~~~~r~~ 194 (433)
+.++....+.|..
T Consensus 415 ~~~~~~~~~~~~~ 427 (434)
T PRK11663 415 ISALLLLPFLNAQ 427 (434)
T ss_pred HHHHHHHHHHhhh
Confidence 5555555555554
No 158
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.52 E-value=1.8e-06 Score=89.75 Aligned_cols=130 Identities=10% Similarity=-0.040 Sum_probs=90.1
Q ss_pred hhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccc--cCchHHHHHHHHHH--HHHHHHHHHHHhcccCch
Q 013969 30 NFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNK--FPPWLVLFIGSLAC--FFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 30 ~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr--~G~r~~~~ig~~l~--~~g~~~~~~~~~~~~~~~ 104 (433)
....+.+++.+++|++..+.+.+.+...++.. ..+++|++.|| +++|+...++..+. +++++... .. .
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~--~~-----~ 331 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCA--LA-----G 331 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHH--Hh-----c
Confidence 33345566666789999999987666666664 48999999998 44555444443333 33333221 11 2
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+++.+.++.++.|++.+..+......+.+.+|+ +||++.|+..+..++|.++.+++...+.+
T Consensus 332 ~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~ 394 (455)
T TIGR00892 332 DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVD 394 (455)
T ss_pred hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeeh
Confidence 356666667777887777777777788888985 59999999999999999888877776664
No 159
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.51 E-value=1.6e-06 Score=86.38 Aligned_cols=123 Identities=10% Similarity=0.108 Sum_probs=85.3
Q ss_pred hhhhccHHHHHHHhCCCHHHHHHHHH-HHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcc----cC
Q 013969 29 YNFPLYSHSLKSVLGFNQHQLTMLGV-ANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRT----VE 102 (433)
Q Consensus 29 y~~s~~~~~l~~~~g~s~~~~~~i~~-~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~----~~ 102 (433)
+....+.|.+.+++|++.++.+.+.. ...+... ..+++|++.||+|+|+.+.++.++.++++.++.....+. .+
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGIT 305 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 33334455554559999999987554 3434444 478899999999999999999988887776554421110 00
Q ss_pred chhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhh
Q 013969 103 SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGG 151 (433)
Q Consensus 103 ~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~g 151 (433)
.++.+.+....++.+++.+..+.+....+.+.+|+ +||+..|+..+..+
T Consensus 306 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 306 FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 01345555566677778888888888999999985 59999999766543
No 160
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.50 E-value=2.1e-06 Score=87.11 Aligned_cols=141 Identities=11% Similarity=0.024 Sum_probs=96.6
Q ss_pred CCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchh
Q 013969 43 GFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSA 121 (433)
Q Consensus 43 g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g 121 (433)
+.+....+.+.+...+... ..++.|++.||+|+|+.+.++.++.++++..+.. . .+.+.+++..++.|++.+
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~--~-----~~~~~~~~~~~l~g~~~~ 322 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF--A-----TTALEVVILKMLHAFEVP 322 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh--c-----CChHHHHHHHHHHHHHHH
Confidence 5566666766555555553 4788899999999999999999988887775443 1 134555566667776665
Q ss_pred hhhhhHHHHHhhcccCC-chhHHHH-HHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhh
Q 013969 122 WLGTAVLVTNMRNFPLS-RGTVAGI-LKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYF 190 (433)
Q Consensus 122 ~~~~~~~~~~~~~Fp~~-RG~a~gi-~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~ 190 (433)
.........+.+.+|+| ++++.+. .....++|+.+.+.+...+.+. ++...+.+.+++.++.++++.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 394 (396)
T TIGR00882 323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVFT 394 (396)
T ss_pred HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 55444555566667754 7766555 3455678888888888887763 56667777777777777666543
No 161
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.50 E-value=4.1e-06 Score=85.33 Aligned_cols=137 Identities=12% Similarity=0.123 Sum_probs=83.3
Q ss_pred HHHHHHhCCCHHHHHHHHHH-HHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHH
Q 013969 36 HSLKSVLGFNQHQLTMLGVA-NDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIAL 113 (433)
Q Consensus 36 ~~l~~~~g~s~~~~~~i~~~-~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 113 (433)
+.+.+++|++.++.+++... ..++.. ..+++|++.||+|+|+.+.++.+...+..+.+....... .+.+.+.+..
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~---~~~~~~~~~~ 310 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP---KHLWTMALAI 310 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---CcHHHHHHHH
Confidence 44677899999999986543 334444 478999999999999998877777666544433211111 1234333322
Q ss_pred ----HHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHH
Q 013969 114 ----CVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAV 178 (433)
Q Consensus 114 ----~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~ 178 (433)
+..|++.+..+......+.+++|.+ ..++..+..++|..+.+++...+.+. ++...+.+.++
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~ 377 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSAT---QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVV 377 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 3455666666666777788888843 23344444567777777766666654 34333333333
No 162
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.45 E-value=5.2e-07 Score=91.25 Aligned_cols=158 Identities=13% Similarity=0.071 Sum_probs=110.0
Q ss_pred hhhhhccHHHHHHHh-C-------CCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHh
Q 013969 28 AYNFPLYSHSLKSVL-G-------FNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVS 98 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~-g-------~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~ 98 (433)
.++.+...|-+...| | ++..-.+.+..+..+|.++ +++.|++.||+|||++.....+++.++.++..+...
T Consensus 57 lF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~ 136 (538)
T KOG0252|consen 57 LFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVG 136 (538)
T ss_pred hhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCC
Confidence 567777777665544 2 4444556788888899876 899999999999999999999998888774444322
Q ss_pred cccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHH---HHHHHHHHHHhcC-------
Q 013969 99 RTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSA---AVFTEIYNMLLHN------- 167 (433)
Q Consensus 99 ~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~---~i~~~l~~~~~~~------- 167 (433)
+..+..-++.+++++++.|+|.|.=|+.+.+..+|.=. ++||.-.+.+.+..|.|- .+++.+....|+.
T Consensus 137 ~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~ 216 (538)
T KOG0252|consen 137 TTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPST 216 (538)
T ss_pred CCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCC
Confidence 32221226778889999999999888666555555544 459998888777666553 3444444444421
Q ss_pred -----ChhHHHHHHHHHHHHHHH
Q 013969 168 -----SSSKLLLVLAVGVPAVCL 185 (433)
Q Consensus 168 -----~~~~~l~~~a~~~~~v~l 185 (433)
..|+..+.++++|+++.+
T Consensus 217 ~~~ld~vWRl~~glg~vpa~~~l 239 (538)
T KOG0252|consen 217 YPHLDGVWRIIFGLGAVPALLVL 239 (538)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 257788888888876654
No 163
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.44 E-value=3.9e-06 Score=96.68 Aligned_cols=119 Identities=18% Similarity=0.125 Sum_probs=90.1
Q ss_pred HHHHHhCCCHH-HHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHH
Q 013969 37 SLKSVLGFNQH-QLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALC 114 (433)
Q Consensus 37 ~l~~~~g~s~~-~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (433)
.+++.+|++.. +.+++.+...++.. ..++.|++.||+++|+++.++.++.+++.+++... .+++.+++..+
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 330 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA-------PSLASVLVLFF 330 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh-------hhHHHHHHHHH
Confidence 35778999998 88887777777775 48999999999999999999888887777655432 13455555666
Q ss_pred HHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHH
Q 013969 115 VATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYN 162 (433)
Q Consensus 115 l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~ 162 (433)
+.|++.++.+.+....+.+.+|+ +||++.|+......+|+++.+.+..
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTT 379 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 77777777776667778888885 5999999988887777755544433
No 164
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.44 E-value=7.5e-07 Score=88.16 Aligned_cols=130 Identities=16% Similarity=0.112 Sum_probs=95.6
Q ss_pred hhhhhhhccHHH-HHHHhCCCH----HHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhc
Q 013969 26 GNAYNFPLYSHS-LKSVLGFNQ----HQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSR 99 (433)
Q Consensus 26 g~~y~~s~~~~~-l~~~~g~s~----~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~ 99 (433)
...|-+.++.-. ++...+-+. .-.+.+++...+..++ ++.+|.++||+|||.+++++.+..++.|..+..
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~---- 117 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL---- 117 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH----
Confidence 456666665533 444444443 2346677777777754 999999999999999999999999998776654
Q ss_pred ccCchhHHHHHH-HHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 100 TVESLPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 100 ~~~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+.++ +.++ .++++|+..|-. ...-+.+++.++ ++|+++++.+...+++|-.+.|.+...+
T Consensus 118 ---S~~F-~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 118 ---SRNF-AAFVLARFLGGIFKGNL-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred ---HHHH-HHHHHHHHhhhhccCch-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 2346 4444 599999887744 345677889997 5699999999999999998877666544
No 165
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.43 E-value=4.5e-06 Score=82.40 Aligned_cols=143 Identities=11% Similarity=0.038 Sum_probs=98.4
Q ss_pred HHHHHHHHH-HhhhhhhhhccHHHH-HH--HhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHH
Q 013969 15 LGAAVWVQI-AAGNAYNFPLYSHSL-KS--VLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFG 89 (433)
Q Consensus 15 l~~~~l~~~-~~g~~y~~s~~~~~l-~~--~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g 89 (433)
+..+++..+ ..|..-+.+.+.+.+ ++ .+|++.++.+...+....++.. .++.+++.||+|+|+++.++.++..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 334444332 344444444444443 33 3699999999876666666654 799999999999999999888887777
Q ss_pred HHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 90 YGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
.+++.. .+ ..+.++ ...+.|++.+..|+.......+.+|++.+.+.++..++ .+|+++.|++...+.+
T Consensus 222 ~~l~~~--~~-----~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~~~~-~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 222 SIGAAL--TH-----GYVAMW-FVLALGLFNSIMFPTIFSLALNALGRHTSQGSGILCLA-IVGGAIVPLLQGSLAD 289 (310)
T ss_pred HHHHHH--cC-----CHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-HhcchHHHHHHHHHHH
Confidence 654432 11 112222 23356788888888888889999998888888886544 5899999888887765
No 166
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.42 E-value=1.1e-05 Score=82.47 Aligned_cols=165 Identities=18% Similarity=0.191 Sum_probs=111.0
Q ss_pred HHHHhhhhhhhhccHHHHHHHhC-CCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHh
Q 013969 21 VQIAAGNAYNFPLYSHSLKSVLG-FNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVS 98 (433)
Q Consensus 21 ~~~~~g~~y~~s~~~~~l~~~~g-~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~ 98 (433)
.....+..|.|. +.+-++.| ++....+...+.+.+.-. +..+.+++..|+|.|+++.++.+..++=+.+++.. .
T Consensus 219 ~~~~~~~~~~f~---~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~-~ 294 (400)
T PF03825_consen 219 IGISHAAYYTFF---SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF-S 294 (400)
T ss_pred HHHHHHHHHHHH---HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 334445556553 22344555 777777765555555544 46788999999999999999999988876665542 1
Q ss_pred cccCchhHHHHHH----HHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHh-hhhhHHHHHHHHHHHHhcC-----
Q 013969 99 RTVESLPYWLLWI----ALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKG-YGGLSAAVFTEIYNMLLHN----- 167 (433)
Q Consensus 99 ~~~~~~~~~~l~~----~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~-~~glg~~i~~~l~~~~~~~----- 167 (433)
. +.+.... -..+-|+.-++.+.++...+.+..|++ |+++.|+..+ .+|+|.++.+.+...+++.
T Consensus 295 ~-----~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~ 369 (400)
T PF03825_consen 295 D-----PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARG 369 (400)
T ss_pred C-----CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchh
Confidence 1 1222222 134567667777888899999999965 9999998765 5789999988888877753
Q ss_pred --ChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 168 --SSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 168 --~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
++..+..+.+++.+++.++.+++.|++
T Consensus 370 ~~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 370 MFDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 233445555555566666666666665
No 167
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.40 E-value=1.1e-05 Score=81.55 Aligned_cols=126 Identities=16% Similarity=0.290 Sum_probs=84.0
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
+++.+|++..+.+++.....++... +++.|++.||+|++.. .+.....++...+....... ..+.+.+.+..++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 309 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMW--QSVICCLLAGLLMWIPGWFG--VMNVWTLLVPAALF 309 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhc--cccHHHHHHHHHHH
Confidence 4666999999998876666666654 7888999999983332 23222222222221111110 11245555556677
Q ss_pred HhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 117 TNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
|.|.++.+........+.+|+++|++.++..+...+|+.+.+.+...+...
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 310 FFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 777787777777778889999999999999988889998888776655433
No 168
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.39 E-value=1.7e-05 Score=83.82 Aligned_cols=137 Identities=19% Similarity=0.183 Sum_probs=99.9
Q ss_pred HHHH-HHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHH
Q 013969 35 SHSL-KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIA 112 (433)
Q Consensus 35 ~~~l-~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~ 112 (433)
.|.+ ++++|.+....+++.....+|+.. +++.+++.+|+++++++..+.++++++++.+++. ++.|..++.
T Consensus 241 lPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~-------~~~~~~~~~ 313 (524)
T PF05977_consen 241 LPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS-------PSFWLALIA 313 (524)
T ss_pred hhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc-------hHHHHHHHH
Confidence 4444 678999999999988888899865 8889999999999999999998888877765441 346666666
Q ss_pred HHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHH
Q 013969 113 LCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAV 178 (433)
Q Consensus 113 ~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~ 178 (433)
.++.|.+.........+.+++.-|++ ||++.++..+....+..+.+.+...+.+. +....+...++
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~ 381 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGA 381 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 77788777766666678889999965 99999998766655555555555544432 34444444443
No 169
>PRK10054 putative transporter; Provisional
Probab=98.37 E-value=1.5e-05 Score=81.16 Aligned_cols=150 Identities=15% Similarity=0.085 Sum_probs=92.9
Q ss_pred HhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhc
Q 013969 41 VLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNS 119 (433)
Q Consensus 41 ~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g 119 (433)
+.+.+...++.+.....+... ..++.|++.||+++|+.+.++.++..+++..+... . .+++.+.+...+.|+|
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~g 311 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS-G-----NSLLLWGMSAAVFTVG 311 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc-c-----hHHHHHHHHHHHHHHH
Confidence 445666666665444434433 36888999999999999999988888887755431 1 1345444556667777
Q ss_pred hhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 013969 120 SAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFVRPCTPA 197 (433)
Q Consensus 120 ~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~ 197 (433)
.+...+.....+.+.-| ++||++.|.... ..+|.++.+.+...+++. .....+..++...++.-++...-.|++|+.
T Consensus 312 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~-~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (395)
T PRK10054 312 EIIYAPGEYMLIDHIAPPGMKASYFSAQSL-GWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARPWG 390 (395)
T ss_pred HHHHHhhHHHHHHHhCCcccceehHhHHHH-HHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCccc
Confidence 65444444445666667 458999886553 347888888777777764 333344444444444444444555555543
No 170
>PRK10133 L-fucose transporter; Provisional
Probab=98.37 E-value=5.7e-06 Score=85.60 Aligned_cols=120 Identities=9% Similarity=0.017 Sum_probs=89.8
Q ss_pred HHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHH
Q 013969 39 KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVAT 117 (433)
Q Consensus 39 ~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 117 (433)
++.+|+|..+.+.......+++.+ .+++|++.||+|+|+++..+.++..++.+...+ .. . .+. .....+.|
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~--~~---~--~~~-~~~~~l~g 358 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF--AG---G--HVG-LIALTLCS 358 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH--cC---C--hHH-HHHHHHHH
Confidence 567899999999977777777754 899999999999999998887777665543322 11 1 122 22344577
Q ss_pred hchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 118 NSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 118 ~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
+|.+..+........+.+|++.+.+.++.... .+|+++.+++...+.+.
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~~~~as~l~~~~-~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMT-IIGGGIVTPVMGFVSDA 407 (438)
T ss_pred HHHHHHHHHHHHHHHcccchhhccchhHHhHH-hccchHHHHHHHHHHHh
Confidence 88888898888899999998888888888654 47788888888876653
No 171
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.34 E-value=1.5e-05 Score=81.15 Aligned_cols=123 Identities=14% Similarity=0.043 Sum_probs=87.3
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
+++.+|.+..+.+.+.....++... +++.|++.||+++|+++..|.+ .++..+.+.. . +++|...+..++.
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~--~-----~~~~~~~~~~~~~ 303 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMAL--Q-----HSLLPAYPLLILI 303 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHH--H-----hHHHHHHHHHHHH
Confidence 5677899999999987777788754 8999999999999998888753 3333332221 1 2345444555567
Q ss_pred HhchhhhhhhHHHHHhhcccCC--chhHHHHHHhhhhhHHHHHHHHHHHHhcCC
Q 013969 117 TNSSAWLGTAVLVTNMRNFPLS--RGTVAGILKGYGGLSAAVFTEIYNMLLHNS 168 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp~~--RG~a~gi~~~~~glg~~i~~~l~~~~~~~~ 168 (433)
|++.++...+..+.+++.-|++ +|++.++......++..+...+......-+
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 357 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLG 357 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcC
Confidence 7777777666667777766653 699999998888888888777766554433
No 172
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.34 E-value=2.6e-05 Score=78.93 Aligned_cols=118 Identities=12% Similarity=0.064 Sum_probs=71.8
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
+++++|++..+.+.+.....++. ...++.|++.||+|+|+++.++.++..++...+.... ..+...+...+.
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~ 302 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP-------SHAVSLFGITLI 302 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 46788999999887665555555 4478899999999999999999998888777665421 112222222222
Q ss_pred HhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 117 TNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+.|.+..+... ...+..| ++.|.+.++...+..+|+++.+.+...+
T Consensus 303 ~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 303 CAGFSVGFGVA--MSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHhHHH--HHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333223222 2233445 3457777665555556666655555433
No 173
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.34 E-value=1.1e-05 Score=83.78 Aligned_cols=137 Identities=17% Similarity=0.126 Sum_probs=81.4
Q ss_pred hhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHH--------HHHHHHHHHHHHHHHHHH
Q 013969 27 NAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLV--------LFIGSLACFFGYGVLWLA 96 (433)
Q Consensus 27 ~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~--------~~ig~~l~~~g~~~~~~~ 96 (433)
..|.+..+.|.+ ++.+|++..+.++......++.. ..+++|++.||+++|+. +..+......+...+...
T Consensus 276 ~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (465)
T TIGR00894 276 LYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALP 355 (465)
T ss_pred HHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666677774 77799999999987766666664 58999999998764421 111111111111111111
Q ss_pred HhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 97 VSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 97 ~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
... . +.+...++..+.+.+.+..+........+..|+++|.+.|+......+|+.+.+.+...+.+.
T Consensus 356 ~~~---~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 356 YLS---A-AFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred HcC---C-chHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCC
Confidence 111 1 122222333344433333333333445567788899999999988889998888887766653
No 174
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.31 E-value=8.6e-06 Score=84.01 Aligned_cols=150 Identities=15% Similarity=-0.012 Sum_probs=78.3
Q ss_pred hhhhhhccHHHH-HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 27 NAYNFPLYSHSL-KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 27 ~~y~~s~~~~~l-~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
..|.+..+.|.+ ++..|++..+.+++.....++.. ..+++|++.||+|+++....+.++..+............ ..
T Consensus 266 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 343 (438)
T TIGR00712 266 LRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNP--AG 343 (438)
T ss_pred HHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcC--CC
Confidence 345666677775 55689999998886665555554 588999999999755433334333222211111101111 11
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHH-HHHHHHHHHhcC-ChhHHHHHHHH
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAA-VFTEIYNMLLHN-SSSKLLLVLAV 178 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~-i~~~l~~~~~~~-~~~~~l~~~a~ 178 (433)
+.+..+...+..|.+.............+.+|+ +||++.|+......+|+. +.+.+...+.+. ++...+.++++
T Consensus 344 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~ 420 (438)
T TIGR00712 344 NPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIG 420 (438)
T ss_pred chHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHH
Confidence 223332222233322211111112345688885 599999998766556654 445555555543 33333333333
No 175
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.31 E-value=2.4e-05 Score=77.58 Aligned_cols=86 Identities=20% Similarity=0.278 Sum_probs=70.1
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
.|.+..| +++|+++.|++.+...+..... ++++.|.+.||+|||+..++-.++.+++++. .+ ++++
T Consensus 55 pY~Y~LY-----~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-----k~---~~~~ 121 (354)
T PF05631_consen 55 PYLYALY-----ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-----KH---SSNY 121 (354)
T ss_pred chhHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-----Hh---cccc
Confidence 4666544 5799999999998887777764 5999999999999999999999999988872 22 2458
Q ss_pred HHHHHHHHHHHhchhhhhhh
Q 013969 107 WLLWIALCVATNSSAWLGTA 126 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~ 126 (433)
+.+++-++++|+++.+.+.+
T Consensus 122 ~~L~~GRvlgGiaTSLLfS~ 141 (354)
T PF05631_consen 122 PVLLLGRVLGGIATSLLFSA 141 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999877654
No 176
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.29 E-value=1.4e-05 Score=79.75 Aligned_cols=132 Identities=13% Similarity=0.024 Sum_probs=88.9
Q ss_pred hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-ccccccccccc-CchHHHHHHHHHHHHHHHHHHHHHhcccCc
Q 013969 26 GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKF-PPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 26 g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~-G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
...+.+..+.|.+.++.|++..+.+.+.+...++... .++.|++.||+ ++|+++.++.++.+++.+.+.... .
T Consensus 211 ~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 285 (355)
T TIGR00896 211 GLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP-----M 285 (355)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh-----h
Confidence 3445556677777667899999999877777777754 89999999999 566677777777777776554321 1
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhcc-c-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNF-P-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~F-p-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
.+.+ + ..++.|++.+..+..........+ + +++|.+.|+......+++++.+++...+.
T Consensus 286 ~~~~-~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 286 HGLW-A--WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred hHHH-H--HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1 334567777766655555555444 3 45799999877766677777766666554
No 177
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.29 E-value=9.6e-06 Score=93.64 Aligned_cols=133 Identities=17% Similarity=0.033 Sum_probs=95.1
Q ss_pred cHHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhc------------
Q 013969 34 YSHS-LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSR------------ 99 (433)
Q Consensus 34 ~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~------------ 99 (433)
+.|. +++.+|.+..+.+++.+...+++.. +++.|++.||.++++.+.++.++.+++.+.+.+...+
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 4455 4677899999999987777788764 8999999999888887777776666554433321000
Q ss_pred -ccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 100 -TVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 100 -~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
.....+.|.+++..++.|++.++...+..+.+++.+|+ +||++.|+......++..+.+.+...+..
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00012345666666677888887777778888999985 59999999988888888887777666653
No 178
>TIGR00898 2A0119 cation transport protein.
Probab=98.28 E-value=1.4e-05 Score=83.72 Aligned_cols=96 Identities=10% Similarity=0.033 Sum_probs=69.2
Q ss_pred ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-Cch
Q 013969 62 VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRG 140 (433)
Q Consensus 62 ~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG 140 (433)
..++.+++.||+|+|+++.++.++.+++++++... .. ...+......++.+.+.+..+........+.||+ .|+
T Consensus 371 ~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 445 (505)
T TIGR00898 371 AKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFV-PV----DLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRN 445 (505)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc-CC----CchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHh
Confidence 46778999999999999999998888877755442 11 1123333334445555555565666777899995 599
Q ss_pred hHHHHHHhhhhhHHHHHHHHHH
Q 013969 141 TVAGILKGYGGLSAAVFTEIYN 162 (433)
Q Consensus 141 ~a~gi~~~~~glg~~i~~~l~~ 162 (433)
+++|+..+...+|+++.+.+..
T Consensus 446 ~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 446 LGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred hhHhHHHHHHHHHHHHHhHHHH
Confidence 9999999988899988777766
No 179
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.27 E-value=4.2e-06 Score=83.35 Aligned_cols=123 Identities=14% Similarity=0.106 Sum_probs=77.1
Q ss_pred hhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchh
Q 013969 28 AYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLP 105 (433)
Q Consensus 28 ~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~ 105 (433)
.+.+..+.|. +++.+|++..+.+.+.....+.. ...++.|++.||+|+|+....+.++...+..++....... .+
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 317 (366)
T TIGR00886 241 FLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP---LS 317 (366)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc---ch
Confidence 4444445555 46778999999987665555555 4589999999999999988888777766665544322110 02
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLS 153 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg 153 (433)
.+.......+.+++.+..+........+.+|++||.+.|+..+...+|
T Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 318 LAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 333222222222233333334445667778899999999977665444
No 180
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.26 E-value=2.2e-05 Score=77.47 Aligned_cols=72 Identities=19% Similarity=0.077 Sum_probs=60.1
Q ss_pred HHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhh---cCCcc--chhHHHHHHhHHHHhhhcccchHHHHHhhhc
Q 013969 346 EAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQ---GVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRLVQS 417 (433)
Q Consensus 346 ~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~---G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~~~~~~ 417 (433)
..+|++.+|+..+.+++-.|.-..+.+......++. |.++. +..++.+..+-.+||++.++++||+++++..
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l 211 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL 211 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 467899999999999998888888777788787653 66654 5789999999999999999999999877653
No 181
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.26 E-value=3.4e-05 Score=80.71 Aligned_cols=140 Identities=17% Similarity=0.172 Sum_probs=94.3
Q ss_pred hhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCch--HHHHHHHHHHHHHH-HHHH-HHHhc
Q 013969 25 AGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPW--LVLFIGSLACFFGY-GVLW-LAVSR 99 (433)
Q Consensus 25 ~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r--~~~~ig~~l~~~g~-~~~~-~~~~~ 99 (433)
.|..-.++......++++|++..|+..+.....+... .+.+.|++.||+|+| +++.++.++..+-. ..+. + ...
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~-~~~ 373 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGF-WPS 373 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHh-hhc
Confidence 3433333333333577999999999887777667665 589999999999999 78777776653321 1111 1 111
Q ss_pred ccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 100 TVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 100 ~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
..+..+-|.++++.++.|+..|..+..+=.+.++.-|+ +.+.-.|+.....-.++.+.|.++..+.
T Consensus 374 ~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~ 440 (477)
T PF11700_consen 374 FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLIT 440 (477)
T ss_pred ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112367888888899999998898888889999994 6899999976654455555555555444
No 182
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.22 E-value=8.5e-06 Score=80.19 Aligned_cols=127 Identities=24% Similarity=0.190 Sum_probs=92.5
Q ss_pred hhhhhccHHHH-HHHhCCC-HHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 28 AYNFPLYSHSL-KSVLGFN-QHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 28 ~y~~s~~~~~l-~~~~g~s-~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
.+.+..+.|.+ ++++|++ ..+.+.+.....+.. ...++.|++.||+|+|+...+......++...+...... .
T Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 297 (352)
T PF07690_consen 222 FSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS----S 297 (352)
T ss_dssp HHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH----C
T ss_pred HHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----h
Confidence 44466677775 8999999 788887655555555 458999999999999888888777777766654331111 1
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHH
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFT 158 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~ 158 (433)
+.+......++.|++.+..+......+.+.+| ++||++.|+.....++|+.+.|
T Consensus 298 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 298 SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 23333445556777778777778888999998 5699999999998888887754
No 183
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.21 E-value=2e-06 Score=82.11 Aligned_cols=117 Identities=16% Similarity=0.132 Sum_probs=85.5
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccc-cCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHH
Q 013969 36 HSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIAL 113 (433)
Q Consensus 36 ~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr-~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 113 (433)
.+.+...+++.++..++.+....-..+ .+++|++.|| +|.|.-.++=.++..+|.+.++... + +.++|.+.+-+
T Consensus 68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Gg---i-~~aFw~M~~GR 143 (459)
T KOG4686|consen 68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGG---I-SHAFWTMLAGR 143 (459)
T ss_pred hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhch---H-HHHHHHHHhhh
Confidence 334555566667777766665555544 8899999998 8998888888888888888775421 1 23589988899
Q ss_pred HHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHH
Q 013969 114 CVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAV 156 (433)
Q Consensus 114 ~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i 156 (433)
++.|+|.-..-.+-.+....||. |+-+.+.|+-.+..-+|+.+
T Consensus 144 F~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 144 FLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred eeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee
Confidence 99999875444455677889998 56999999977766666643
No 184
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.19 E-value=2.7e-05 Score=79.72 Aligned_cols=118 Identities=18% Similarity=0.182 Sum_probs=80.5
Q ss_pred HhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhc
Q 013969 41 VLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNS 119 (433)
Q Consensus 41 ~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g 119 (433)
.++ +..+.+.+.....++.. ..++.|++.||+|+|+++.++.++..+++..+... . .+.+.+.+..++.|++
T Consensus 252 ~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~g~~ 324 (437)
T TIGR00792 252 VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA-G-----SNLPLILVLIILAGFG 324 (437)
T ss_pred ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-c-----hhHHHHHHHHHHHHHH
Confidence 344 34455555555555554 48899999999999999999998888887765442 1 1244444555667777
Q ss_pred hhhhhhhHHHHHhhccc--------CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 120 SAWLGTAVLVTNMRNFP--------LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 120 ~g~~~~~~~~~~~~~Fp--------~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
.+..+......+.+..| +++|.+.|+......+|.++.+.+...++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 325 QNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665555555555432 34799999998888888888877766655
No 185
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.18 E-value=3.1e-05 Score=78.97 Aligned_cols=127 Identities=12% Similarity=-0.015 Sum_probs=82.9
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHh-hcc-ccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHH
Q 013969 33 LYSHSLKSVLGFNQHQLTMLGVANDIGE-NVG-LLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLW 110 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~-~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~ 110 (433)
.+.|.+.++.+.+..+.+++.....++. ... +..++..||++.|+.+..+.++.++++.++... .+++.+.
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~ 301 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-------SNLQQLF 301 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-------hhHHHHH
Confidence 3456654554446777777554444433 333 444444456787877778888777777655431 1234444
Q ss_pred HHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 111 IALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 111 ~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+..++.++|.+.........+.+..| ++||++.|+.....++|.++.+.+...+.+
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~ 358 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFD 358 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence 44455666666555555677788888 569999999999988999888877777765
No 186
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.16 E-value=0.00018 Score=73.62 Aligned_cols=56 Identities=18% Similarity=0.141 Sum_probs=41.8
Q ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccC-chHHHHHHHHHHHHHHH
Q 013969 36 HSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFP-PWLVLFIGSLACFFGYG 91 (433)
Q Consensus 36 ~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G-~r~~~~ig~~l~~~g~~ 91 (433)
+.+-++.|+|..|++.+.+...+...+ .++.|.++||++ +|+++.+..++.++..+
T Consensus 26 ~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~ 83 (400)
T PF03825_consen 26 PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALL 83 (400)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHH
Confidence 344667899999999988877777765 899999999986 56666665555555433
No 187
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.14 E-value=6.2e-05 Score=78.21 Aligned_cols=130 Identities=14% Similarity=0.070 Sum_probs=83.6
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCc-hh
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES-LP 105 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~-~~ 105 (433)
.+....|+..+-++-|++..++.+......+... ..+++.++.||+|||++++++..++.+..+.+.....-.... +.
T Consensus 286 i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~ 365 (485)
T KOG0569|consen 286 INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSW 365 (485)
T ss_pred cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 5555667777888889999988887776666654 589999999999999999999999888777665432211001 11
Q ss_pred HHHHHH---HHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHH
Q 013969 106 YWLLWI---ALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFT 158 (433)
Q Consensus 106 ~~~l~~---~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~ 158 (433)
.+..++ +..+...+.|.. ..+.-..+|.||. .|..|.......+-++..+..
T Consensus 366 ~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~ 421 (485)
T KOG0569|consen 366 LSYLCIAAIFLFIISFAIGPG-PIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVG 421 (485)
T ss_pred HHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHH
Confidence 111111 111222222211 2234567999995 599999997776655554443
No 188
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.14 E-value=9.9e-05 Score=74.64 Aligned_cols=143 Identities=8% Similarity=-0.034 Sum_probs=80.7
Q ss_pred hhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhccccccccccccCc---hHHHHH-HHHHHHHHHHHHHHHHhcc
Q 013969 25 AGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFPP---WLVLFI-GSLACFFGYGVLWLAVSRT 100 (433)
Q Consensus 25 ~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~---r~~~~i-g~~l~~~g~~~~~~~~~~~ 100 (433)
....|.+..+.|++-++.|++.. .+.......+.... -.|++.||..+ |+.... ..++.++....+. ..+
T Consensus 205 ~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~--g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~--~~~- 278 (368)
T TIGR00903 205 VALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLI--GVAVIPDRVARAGLRSIYIRAAALLIAAFFLALA--FEL- 278 (368)
T ss_pred HHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHH--HHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHH--Hcc-
Confidence 34567777788997677888865 44433332222222 23667777643 444332 3333333333222 111
Q ss_pred cCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHH
Q 013969 101 VESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAV 178 (433)
Q Consensus 101 ~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~ 178 (433)
+ .+...++..+.+.+....+.......++.||+ .||++.|+..+...+++...+++...++. +....+.+.++
T Consensus 279 --~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~~ 352 (368)
T TIGR00903 279 --N--RLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-SAEAYFTFLAI 352 (368)
T ss_pred --c--cHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHH
Confidence 1 22223333445544444444455677899996 59999999999878998888877776663 43344444444
No 189
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.13 E-value=3.6e-05 Score=80.42 Aligned_cols=166 Identities=17% Similarity=0.114 Sum_probs=102.3
Q ss_pred HHHhhhhhhhh-ccHHHHHHHhCCCHHHHHHHHHHHHHHhhccccccccccccC-----chHHHHHHHHHHH-HHHHHHH
Q 013969 22 QIAAGNAYNFP-LYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFP-----PWLVLFIGSLACF-FGYGVLW 94 (433)
Q Consensus 22 ~~~~g~~y~~s-~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~ig~~l~~-~g~~~~~ 94 (433)
.+..|..+... ...+.+++++|+|.++++.+.+...+...+.++.|.+.||++ ||+.++++.++.+ +++..+.
T Consensus 35 y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~ 114 (468)
T TIGR00788 35 LFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLP 114 (468)
T ss_pred HHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc
Confidence 34555544333 334446888999999998887777777777888999999998 7888888877763 3333221
Q ss_pred HHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHH---hhhhhHHHHHHHHHHHHhcC-Chh
Q 013969 95 LAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILK---GYGGLSAAVFTEIYNMLLHN-SSS 170 (433)
Q Consensus 95 ~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~---~~~glg~~i~~~l~~~~~~~-~~~ 170 (433)
. .++ ......+..++.+++.+..+.++-....+..++++....++.. ...++|..+.+.+...+.+. +|+
T Consensus 115 ~-----~~~-~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~ 188 (468)
T TIGR00788 115 G-----KVS-SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTR 188 (468)
T ss_pred c-----ccc-hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 1 111 1222223556677778888888888889999844433322222 22236666665555555543 455
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccC
Q 013969 171 KLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 171 ~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
..+.+.+.++++. ++...++++.
T Consensus 189 ~~f~~~a~l~ll~-~~~~~~~~E~ 211 (468)
T TIGR00788 189 ILFLITAALLLLQ-LFVSNLSKER 211 (468)
T ss_pred hHHHHHHHHHHHH-HHHHHhcccc
Confidence 5555666665555 4445666554
No 190
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.13 E-value=2.5e-05 Score=78.69 Aligned_cols=148 Identities=18% Similarity=0.194 Sum_probs=99.0
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
-+.++||++.++.++.....+... .+++.|+|.||+|+|+++.++.++..+..+...+ ... + ..+++++.+.
T Consensus 279 g~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~--~~~--~---~~f~i~gll~ 351 (438)
T COG2270 279 GAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIF--LEG--E---LDFWILGLLV 351 (438)
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHH--ccc--c---HHHHHHHHHH
Confidence 356999999999998877777765 5899999999999999999999988876654332 121 1 2334466677
Q ss_pred HhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhc---CChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 117 TNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLH---NSSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~---~~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
|...|..+..+=....|..|+ |-|.-.|+.... |=.+.+++|+.-.++. ++.+.-+..+.++ ..++++....++
T Consensus 352 g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyalt-gra~S~~gp~lv~v~t~iTg~~r~g~~~i~vl-l~iGl~~L~~v~ 429 (438)
T COG2270 352 GTSLGGAQASSRSYLARLVPKGKEGRFFGLYALT-GRAASFLGPFLVAVITQITGSSRAGVLSIIVL-LLIGLLLLLRVK 429 (438)
T ss_pred HHhcchHHHHHHHHHHHhCCCccccceeehhhhh-hhHHHHHHHHHHHHHHHHhcchhhHHHHHHHH-HHhhHhhEEeec
Confidence 777787888888889999995 578888887665 4444455555555553 3433333333332 233444444444
Q ss_pred cC
Q 013969 193 PC 194 (433)
Q Consensus 193 ~~ 194 (433)
.+
T Consensus 430 ~~ 431 (438)
T COG2270 430 VP 431 (438)
T ss_pred CC
Confidence 44
No 191
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.13 E-value=3.1e-05 Score=79.37 Aligned_cols=134 Identities=10% Similarity=0.097 Sum_probs=81.0
Q ss_pred hhhhhhhccHHHHHHHh--CCCHHHHHHHHHHHHHHhhc-cccccccccccCchHH-HHHHHHHHHHHHHHHHHHHhccc
Q 013969 26 GNAYNFPLYSHSLKSVL--GFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLV-LFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 26 g~~y~~s~~~~~l~~~~--g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~-~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
...+.+..+.|++.+++ +.+..+.+.+.....++... .++.|++.||+|+|+. ..+..++.++++.+. . . .
T Consensus 256 ~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~-~-~-~-- 330 (412)
T TIGR02332 256 NTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA-S-A-T-- 330 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH-H-h-c--
Confidence 44667777888876654 67777888776666666654 7899999999998775 344444444443221 1 1 1
Q ss_pred CchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 102 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+.+ ...+ ...++.+.|.............+.+|+ +||++.|+......+|+++.+.+...+.+
T Consensus 331 ~~~-~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 331 DHN-LIQL-LGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred CCH-HHHH-HHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 111 1111 111122222211111122333556884 59999999999988999888877766665
No 192
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.12 E-value=3.4e-05 Score=76.47 Aligned_cols=136 Identities=15% Similarity=0.000 Sum_probs=78.0
Q ss_pred hhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhH
Q 013969 29 YNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPY 106 (433)
Q Consensus 29 y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~ 106 (433)
+.+..+.|. +++++|++..+.+.+.....++.. ..++.|++.||++.|+...+...........+....... ..+.
T Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 310 (379)
T TIGR00881 233 TGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNP--AANP 310 (379)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCc--chhH
Confidence 344445555 467789999999987766666665 488999999986433322222222111111111111111 1123
Q ss_pred HHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 107 WLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 107 ~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+...++.++.|...............+.+| ++||++.|+......+|+.+.+.+...+.+
T Consensus 311 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 311 LMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 333333444443332223333455788898 459999999988888998887777666553
No 193
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.10 E-value=2.8e-05 Score=79.24 Aligned_cols=143 Identities=10% Similarity=0.030 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhh
Q 013969 48 QLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTA 126 (433)
Q Consensus 48 ~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~ 126 (433)
-.+...+...+.-. +..+..++.+|+|+|+.++++.+.+++=+...++. ++.|.+.+...+-|+-.++...+
T Consensus 260 ~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-------~~~~~i~~~klLH~~e~~l~lva 332 (412)
T PF01306_consen 260 MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-------TNPWVISLIKLLHALEFPLLLVA 332 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------SHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-------cchHHHHHHHHHHHHHHHHHHHH
Confidence 34555555444443 47888999999999999999999988876654431 34677777888888888888888
Q ss_pred HHHHHhhcccCC-chhHHHHH-HhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 013969 127 VLVTNMRNFPLS-RGTVAGIL-KGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVCLVMMYFVRPCTPA 197 (433)
Q Consensus 127 ~~~~~~~~Fp~~-RG~a~gi~-~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~ 197 (433)
..+.+++.||+| ..+.-.+. ....++|..+++++...+.+. +.+...+.++.+.+...+++.+.++..++.
T Consensus 333 ~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 333 AFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 999999999977 56776664 456789999999999998875 345555667777778888888888876553
No 194
>PRK09848 glucuronide transporter; Provisional
Probab=98.09 E-value=3.4e-05 Score=79.73 Aligned_cols=123 Identities=15% Similarity=0.092 Sum_probs=83.9
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
+++.+|.+.....+......++.. ..++.|++.||+|+|+++.+|.++..++++.+.+. . ..++|.+++..++.
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~--~---~~~~~~~~~~~~l~ 329 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV--S---VWSLPVALVALAIA 329 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--C---chhHHHHHHHHHHH
Confidence 356678776555544444344444 48899999999999999999999888888766531 1 12355555556677
Q ss_pred HhchhhhhhhHHHHHhhccc--------CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 117 TNSSAWLGTAVLVTNMRNFP--------LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp--------~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
|+|.+...........+.-| +++|...|+......+|.++.+.+...++
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78877766665555555543 23589999988887788888766655443
No 195
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.09 E-value=9e-05 Score=76.23 Aligned_cols=150 Identities=16% Similarity=0.121 Sum_probs=103.3
Q ss_pred HHHHhC----CCHHHHHH-HHHHHHHHhhccccccccccc-cCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHH
Q 013969 38 LKSVLG----FNQHQLTM-LGVANDIGENVGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWI 111 (433)
Q Consensus 38 l~~~~g----~s~~~~~~-i~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~ 111 (433)
+..+++ +|++++.- ++....+.....+++||++|| .|+|+++..|++++.+|++++.... . .....+++
T Consensus 48 l~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~--~---~~~~gl~i 122 (498)
T COG3104 48 LYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS--V---SGPGGLYI 122 (498)
T ss_pred HHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc--c---ccccHHHH
Confidence 444555 99998865 555555555669999999999 6999999999999999999776521 0 12345566
Q ss_pred HHHHHHhchhhhhhhHHHHHhhcccC---CchhHHHHHHhhhhhHHHHHHHHHHHHh-cCChhHHHHHHHHHHHHHHHHH
Q 013969 112 ALCVATNSSAWLGTAVLVTNMRNFPL---SRGTVAGILKGYGGLSAAVFTEIYNMLL-HNSSSKLLLVLAVGVPAVCLVM 187 (433)
Q Consensus 112 ~~~l~g~g~g~~~~~~~~~~~~~Fp~---~RG~a~gi~~~~~glg~~i~~~l~~~~~-~~~~~~~l~~~a~~~~~v~l~~ 187 (433)
...+.++|+|+.=....+.+.+.+|+ ||=.+.++.-.+-++|+.+ +|+...++ ..-.+..-+.++.+.-..+++.
T Consensus 123 ~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~-~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~ 201 (498)
T COG3104 123 GLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLI-APIITGLLAINYGWHVGFGLAAVGMIIGLVI 201 (498)
T ss_pred HHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHH-HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 55566689998877778889999973 3666666666666788755 44444444 3333445555666666666766
Q ss_pred Hhhccc
Q 013969 188 MYFVRP 193 (433)
Q Consensus 188 ~~~~r~ 193 (433)
.++.|.
T Consensus 202 f~~~~r 207 (498)
T COG3104 202 FLLGRR 207 (498)
T ss_pred HHHccc
Confidence 666654
No 196
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.08 E-value=0.0004 Score=72.70 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=57.4
Q ss_pred CcHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHH-hhcCCcc--chhHHHHHHhHHHHhhhcccchHHHHHhh
Q 013969 342 FKFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGI-AQGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRLV 415 (433)
Q Consensus 342 ~t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~-s~G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~~~~ 415 (433)
.|+++.-|.|+.+.+.++.++-.-...+++...+.+++ .+|++.. ....-+..+..++|-+++|++.||++.|.
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~ 348 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKT 348 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 46778878888888888877766555556666666666 4588876 45667788999999999999999999983
No 197
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.96 E-value=0.00052 Score=70.34 Aligned_cols=169 Identities=14% Similarity=0.028 Sum_probs=85.8
Q ss_pred hhhhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCc
Q 013969 26 GNAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVES 103 (433)
Q Consensus 26 g~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~ 103 (433)
...+.+..+.|. +++.+|++..+.++.......+... ..+.+++.+|.+.++....+..+..+|..++....... +.
T Consensus 232 ~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~-~~ 310 (413)
T PRK15403 232 IPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW-PH 310 (413)
T ss_pred HHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc-cc
Confidence 345566666676 4667899999999866544445443 56667765444444443333333333433332211001 11
Q ss_pred hhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHHHHHHHHhcCC-hhHHHHHHHHHH
Q 013969 104 LPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLHNS-SSKLLLVLAVGV 180 (433)
Q Consensus 104 ~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~-~~~~l~~~a~~~ 180 (433)
+++..++..++.++|.+..+..... ..|++ ..+|++.++.......+..+.+.....+.... ...+.....++.
T Consensus 311 -~~~~~~~~~~l~~~G~~~~~p~~~~--~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 387 (413)
T PRK15403 311 -VWLWSVLGTSLYAFGIGLIFPTLFR--FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAG 387 (413)
T ss_pred -cHHHHHHHHHHHHHHHHHHhHHHHH--HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 2333344555666677666544433 23454 34899999876665555555555544443332 333333333333
Q ss_pred HHHHHHHHhhcccCCCCC
Q 013969 181 PAVCLVMMYFVRPCTPAS 198 (433)
Q Consensus 181 ~~v~l~~~~~~r~~~~~~ 198 (433)
++.........|.+++++
T Consensus 388 ~~~~~~~~~~~~~~~~~~ 405 (413)
T PRK15403 388 VIVVFTLAGLLNRVRQHQ 405 (413)
T ss_pred HHHHHHHHHHHhhhhhhh
Confidence 333334444445554443
No 198
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.96 E-value=0.00021 Score=72.90 Aligned_cols=45 Identities=18% Similarity=0.117 Sum_probs=33.7
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIG 82 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig 82 (433)
++++-|+|.+|+|.+.++..+... .+|+.|.+.||.|.||-++.-
T Consensus 34 L~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~ 79 (412)
T PF01306_consen 34 LTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWF 79 (412)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHH
T ss_pred HccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHH
Confidence 567789999999998877777765 599999999999977755433
No 199
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.93 E-value=0.00022 Score=73.33 Aligned_cols=151 Identities=17% Similarity=0.157 Sum_probs=97.4
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
.+..+|.+ ...+.+.....+... ..++.+++.||+|+|+++..+.++.+++.+.+++... .+.+.+++..++.
T Consensus 252 ~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~l~ 325 (428)
T PF13347_consen 252 FTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP-----GSPWLVLILFILA 325 (428)
T ss_pred HHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHh
Confidence 35556655 445555555556654 5899999999999999999999999999888776421 2367777778888
Q ss_pred HhchhhhhhhHHHHHhhccc--------CCchhHHHHHHhhhhhHHHHHHHHHHHHhc-----CC--------hhHHHHH
Q 013969 117 TNSSAWLGTAVLVTNMRNFP--------LSRGTVAGILKGYGGLSAAVFTEIYNMLLH-----NS--------SSKLLLV 175 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp--------~~RG~a~gi~~~~~glg~~i~~~l~~~~~~-----~~--------~~~~l~~ 175 (433)
|++.+..+.......++..+ ++.|...|+.....-++.++.+.+...++. .+ ....-..
T Consensus 326 gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~~~~~q~~~~~~~i~~~ 405 (428)
T PF13347_consen 326 GIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYDANAAVQSASALSGIRIL 405 (428)
T ss_pred HhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHH
Confidence 88888777666666666554 224777777665555666555554444331 11 1233444
Q ss_pred HHHHHHHHHHHHHhhcccC
Q 013969 176 LAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 176 ~a~~~~~v~l~~~~~~r~~ 194 (433)
.+.+|++..+++..+++..
T Consensus 406 ~~~~p~~~~~~~~i~~~~y 424 (428)
T PF13347_consen 406 FSIVPAIFLLLAIIFMRFY 424 (428)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 4555555555555555443
No 200
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.83 E-value=0.00077 Score=69.88 Aligned_cols=155 Identities=14% Similarity=0.057 Sum_probs=104.1
Q ss_pred ccCCCCCChHhHHHHHHHHHHhhh---hhhhhccHHHHHHH--hCCCHHHHHHHHHHHHHHhh-ccccccccccccCc-h
Q 013969 4 LKAGSRPPWVGLGAAVWVQIAAGN---AYNFPLYSHSLKSV--LGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPP-W 76 (433)
Q Consensus 4 ~~~~~~~~w~~l~~~~l~~~~~g~---~y~~s~~~~~l~~~--~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~-r 76 (433)
.++..+.+|+.+..+.+.++..+. +|.-+. -| +.++ .+-+.+..|++..+..++.. .++..|+...|.|. |
T Consensus 25 ~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~-wp-Yl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k 102 (488)
T KOG2325|consen 25 PLDERKTNWRSIYLALLNSFLVAVQFSIYLTSM-WP-YLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVK 102 (488)
T ss_pred cccccCCchHhHHHHHHHHHHHhhhheEEEeec-ch-hhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcc
Confidence 445667889888777776655443 222222 23 3444 66777778887776777774 69999999999986 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHH--HhhcccCCchhHHHHHHhhhhhHH
Q 013969 77 LVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVT--NMRNFPLSRGTVAGILKGYGGLSA 154 (433)
Q Consensus 77 ~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~--~~~~Fp~~RG~a~gi~~~~~glg~ 154 (433)
+.++.|.++..+|.+++.. ..... +..-|.+.+.+++.|+|.+.. +..+. ..+..++.|-+|.+....++-+|.
T Consensus 103 ~Pli~s~ii~~~g~llY~~-l~~~~-~~~~y~mL~~R~l~Gvg~~n~--a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ 178 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLA-LAYVP-NGVKYLMLVARILTGVGVGNF--AVLRAYIADASTVEDRPRAFAATSGGFVLGI 178 (488)
T ss_pred cCHHHHHHHHHHHHHHHHH-HHhcc-cchHHHHHHHHHHcCcCcccH--HHHHHHHHhccCccchHHHHHHhhhHHHHHH
Confidence 8899999999999987733 22322 214566777899999887633 33333 344578888888888777776666
Q ss_pred HHHHHHHHHHh
Q 013969 155 AVFTEIYNMLL 165 (433)
Q Consensus 155 ~i~~~l~~~~~ 165 (433)
.+.+ ....+|
T Consensus 179 ilGp-~~q~~f 188 (488)
T KOG2325|consen 179 ILGP-TIQLAF 188 (488)
T ss_pred HHhH-HHHHHH
Confidence 5554 444444
No 201
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.79 E-value=0.00017 Score=75.85 Aligned_cols=132 Identities=9% Similarity=0.052 Sum_probs=90.0
Q ss_pred hccccccccccccCchH-------HHHHHHHHHHHHHHHHHH---HHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHH
Q 013969 61 NVGLLPGLASNKFPPWL-------VLFIGSLACFFGYGVLWL---AVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVT 130 (433)
Q Consensus 61 ~~~~~~G~l~Dr~G~r~-------~~~ig~~l~~~g~~~~~~---~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~ 130 (433)
.++|+.|++.||+|+|+ -+.+|.++.+++++.++. .........++|.+....++.|+|.++...+.+..
T Consensus 324 i~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~ 403 (489)
T PRK10207 324 VASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAM 403 (489)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 45788899999999997 377888888888765431 11111111245666666777889999888888999
Q ss_pred HhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHHHhc-C----------ChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 131 NMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNMLLH-N----------SSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 131 ~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~-~----------~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
+.+.-|++ +|.++|+.....++|+.+...+.+..-. . ...+++..++++.++++++.....|
T Consensus 404 ~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 404 IAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999965 9999999998888999888766654321 1 1235555566555555554444333
No 202
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.74 E-value=0.00079 Score=64.70 Aligned_cols=146 Identities=17% Similarity=0.144 Sum_probs=89.6
Q ss_pred CChHhHHHHHHHHHHhhhhhhhhccHHH-HHHHhCCCHHHHHHHHH-HHHHHhhccccccccccccCchHHHHHHHHHHH
Q 013969 10 PPWVGLGAAVWVQIAAGNAYNFPLYSHS-LKSVLGFNQHQLTMLGV-ANDIGENVGLLPGLASNKFPPWLVLFIGSLACF 87 (433)
Q Consensus 10 ~~w~~l~~~~l~~~~~g~~y~~s~~~~~-l~~~~g~s~~~~~~i~~-~~~~~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~ 87 (433)
.-|...+.|++-....-..|..+ |- ++++||+|+.+.+.+.+ ...+....+|+.|.+.||+|.+.....++.+..
T Consensus 265 pfw~~~iicv~yyva~fPFi~lg---~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITLG---PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILT 341 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhh---HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHH
Confidence 34666555555332222233322 22 59999999999988644 444444569999999999999998888777655
Q ss_pred H-HHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 88 F-GYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 88 ~-g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+ +-.++.+... + ++..+ .+.|+..++.-.+.-..++...|++ -|+|-|...+-.++|-++.+.+...+.
T Consensus 342 l~~H~~l~Ft~l----s-Py~~m----~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 342 LLGHSGLFFTFL----S-PYTSM----TFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred HHHhhhHHhhhc----c-HHHHH----HHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 5 4444433221 1 12222 2334333332222224456667865 899999999999999887665555555
Q ss_pred cC
Q 013969 166 HN 167 (433)
Q Consensus 166 ~~ 167 (433)
++
T Consensus 413 d~ 414 (459)
T KOG4686|consen 413 DG 414 (459)
T ss_pred cC
Confidence 43
No 203
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.00039 Score=70.23 Aligned_cols=157 Identities=17% Similarity=0.159 Sum_probs=90.8
Q ss_pred hhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhhc-ccccccccccc--CchHHHHHHHHHHHH-HHHHHHHHHhcccC
Q 013969 28 AYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKF--PPWLVLFIGSLACFF-GYGVLWLAVSRTVE 102 (433)
Q Consensus 28 ~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~~ig~~l~~~-g~~~~~~~~~~~~~ 102 (433)
-|...-+.|- +.|+.|+|..++++..+..-++.+. .+++|+++||. |+|..+.+...+... +...++.. +
T Consensus 268 R~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~-----~ 342 (448)
T COG2271 268 RYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA-----P 342 (448)
T ss_pred HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC-----C
Confidence 4555555665 5888999999999977777777764 89999999994 788766555544433 44433331 1
Q ss_pred chhHHHHHHHHHHHHhchhhhhhhHH---HHHhhcccCC-chhHHHHHHhhhhh-HHHHHHHHHHHHhcC-ChhHHHHHH
Q 013969 103 SLPYWLLWIALCVATNSSAWLGTAVL---VTNMRNFPLS-RGTVAGILKGYGGL-SAAVFTEIYNMLLHN-SSSKLLLVL 176 (433)
Q Consensus 103 ~~~~~~l~~~~~l~g~g~g~~~~~~~---~~~~~~Fp~~-RG~a~gi~~~~~gl-g~~i~~~l~~~~~~~-~~~~~l~~~ 176 (433)
+.++++...+..+.|+ +.|.|.+ ....+.-|++ -|+|.|++-.+.-+ |++..........+. +|...+.++
T Consensus 343 ~~~~~l~~~~l~~iGf---~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~ 419 (448)
T COG2271 343 NGSYLLDAILLFIIGF---LIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVL 419 (448)
T ss_pred CccHHHHHHHHHHHHH---HHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHH
Confidence 2234554445555553 2344442 2234445876 89999998766667 444433333333333 454444444
Q ss_pred HHHHHHHHHHHHhhcc
Q 013969 177 AVGVPAVCLVMMYFVR 192 (433)
Q Consensus 177 a~~~~~v~l~~~~~~r 192 (433)
.+..++..++...+.+
T Consensus 420 ~~~a~l~~lll~~~~~ 435 (448)
T COG2271 420 SIAALLAILLLLPVWN 435 (448)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4444444444444443
No 204
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.00061 Score=71.85 Aligned_cols=136 Identities=15% Similarity=0.084 Sum_probs=98.1
Q ss_pred hhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCch
Q 013969 26 GNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESL 104 (433)
Q Consensus 26 g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~ 104 (433)
...+...++.|.+.+..+++..+++.+.+...+... .-+..|++.|+...++.......+...|...+..... .
T Consensus 312 ~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~-----~ 386 (509)
T KOG2504|consen 312 LGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA-----T 386 (509)
T ss_pred HHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh-----c
Confidence 345666778888888999999999997666666665 4799999999999544444433333334333333222 2
Q ss_pred hHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 105 PYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 105 ~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+++.++.+.++.|+..|....-...++.+..+ ++-..+.|+.....|+++.+.+|+...+.+
T Consensus 387 ~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d 449 (509)
T KOG2504|consen 387 TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYD 449 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeee
Confidence 47788888888888777654444456788887 677999999999999999999999986554
No 205
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.68 E-value=0.00017 Score=75.37 Aligned_cols=126 Identities=16% Similarity=-0.011 Sum_probs=91.7
Q ss_pred HHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcc---cCchhHHHHHHHHHH
Q 013969 40 SVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRT---VESLPYWLLWIALCV 115 (433)
Q Consensus 40 ~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~---~~~~~~~~l~~~~~l 115 (433)
+.+|+++.+++.+.....++.. .....+++.+|++.|+++.++.++.+++.+......... ..-++.+.+....++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 4689999999997666666665 488899999999999999999999988775432111110 000112223334566
Q ss_pred HHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 116 ATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 116 ~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
.+++.++.+.+....+++.-|+ .+|+..|+..+..++|..+.+.+...+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~ 411 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLM 411 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777778888888999999985 5999999999999999888875444443
No 206
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.64 E-value=0.0011 Score=69.98 Aligned_cols=127 Identities=13% Similarity=0.123 Sum_probs=87.7
Q ss_pred cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcc--cCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-c
Q 013969 63 GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRT--VESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-R 139 (433)
Q Consensus 63 ~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~--~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-R 139 (433)
....+++.||+++++.+.+|.++.++++..+....... ....+.|++....++.|+|..+........+.+.-|++ |
T Consensus 337 ~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~r 416 (500)
T PRK09584 337 AAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLM 416 (500)
T ss_pred HHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHH
Confidence 34458888889999999999999999998876532210 00123455556777788888888888888899999965 9
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHh-c----------CChhHHHHHHHHHHHHHHHHHHh
Q 013969 140 GTVAGILKGYGGLSAAVFTEIYNMLL-H----------NSSSKLLLVLAVGVPAVCLVMMY 189 (433)
Q Consensus 140 G~a~gi~~~~~glg~~i~~~l~~~~~-~----------~~~~~~l~~~a~~~~~v~l~~~~ 189 (433)
|+++|+.....++|+.+..++.+..- + .....++..++++.++++++...
T Consensus 417 g~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 417 GFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988777788877777765322 1 01345666666655544444433
No 207
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.59 E-value=0.0031 Score=65.27 Aligned_cols=119 Identities=8% Similarity=0.063 Sum_probs=76.0
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHh-hccccccccccc----cCchHHH-HHHHHHHHHHHHHHHHHHhcccCchhHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNK----FPPWLVL-FIGSLACFFGYGVLWLAVSRTVESLPYWLLWI 111 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr----~G~r~~~-~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~ 111 (433)
+.+.+|++...++.+..+.=+.- ..-|+.|.+.|| +|+||.. +.|++-+++.+.+++..- +.....+....++
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p-~~~~~~k~~ya~v 117 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP-DFSMTGKLIYALV 117 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC-CcccCcchHHHHH
Confidence 58899999999998666555554 458999999997 7877654 556577777666655421 1110112444445
Q ss_pred HHHHHHhchhhhhhhHHHHHhhcc--cCCchhHHHHHHhhhhhHHHHH
Q 013969 112 ALCVATNSSAWLGTAVLVTNMRNF--PLSRGTVAGILKGYGGLSAAVF 157 (433)
Q Consensus 112 ~~~l~g~g~g~~~~~~~~~~~~~F--p~~RG~a~gi~~~~~glg~~i~ 157 (433)
-..+.+++..+++.|--+...+.- |++|-+..+.-..+.++|..+.
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~ 165 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLV 165 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566676666666555555554 4568888777666665665444
No 208
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.54 E-value=1.7e-05 Score=84.16 Aligned_cols=122 Identities=18% Similarity=0.133 Sum_probs=2.2
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccC---------
Q 013969 33 LYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVE--------- 102 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~--------- 102 (433)
....+++++|+++.+|.+++.+...++.. +.++..++.+|.-+-|.+.+|.+++++|.+++++ -|+..
T Consensus 24 ~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~l--Phf~~~~y~~~~~~ 101 (539)
T PF03137_consen 24 SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFAL--PHFLSGPYSYEEAS 101 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhc--cHhhcCCCcccccc
Confidence 34457899999999999999999999985 4888899998877778888999999999888754 11100
Q ss_pred ----------------------------------chh--HHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHH
Q 013969 103 ----------------------------------SLP--YWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGI 145 (433)
Q Consensus 103 ----------------------------------~~~--~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi 145 (433)
+.+ ++.+++..++.|+|....|+-..+.+=++-++ +-+.-+|+
T Consensus 102 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi 181 (539)
T PF03137_consen 102 NSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGI 181 (539)
T ss_dssp --------------------------------------------------SSS---------------------------
T ss_pred ccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhh
Confidence 000 12223356667777776777667767666653 35555666
Q ss_pred HHhhhhhHHHH
Q 013969 146 LKGYGGLSAAV 156 (433)
Q Consensus 146 ~~~~~glg~~i 156 (433)
..+...+|.++
T Consensus 182 ~~~~~~lGPa~ 192 (539)
T PF03137_consen 182 LYAMSILGPAL 192 (539)
T ss_dssp -----------
T ss_pred hhHHhhccHHH
Confidence 55554444433
No 209
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.54 E-value=0.0015 Score=68.22 Aligned_cols=118 Identities=9% Similarity=-0.024 Sum_probs=70.5
Q ss_pred CHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhh
Q 013969 45 NQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWL 123 (433)
Q Consensus 45 s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~ 123 (433)
+....+.+.....+... ..++.|++.||+|+|+++.++.++..++.+.+...... +..+.+.+.+..++.|++.+..
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~g~~~~~~ 341 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLA--APHNALLIVIAGILLNIGTALF 341 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc--CchhHHHHHHHHHHHHHHHHHH
Confidence 44445555544444444 47889999999999999998888777666554331111 1123455555566677777766
Q ss_pred hhhHHHHHhhc-----cc--CC-chhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 124 GTAVLVTNMRN-----FP--LS-RGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 124 ~~~~~~~~~~~-----Fp--~~-RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
+......+.+. ++ +| .|...|......-+|.++.+.+...+
T Consensus 342 ~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~ 390 (473)
T PRK10429 342 WVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVV 390 (473)
T ss_pred HHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555 33 22 35566666555556666655444443
No 210
>PRK09669 putative symporter YagG; Provisional
Probab=97.53 E-value=0.0022 Score=66.28 Aligned_cols=109 Identities=13% Similarity=0.013 Sum_probs=65.5
Q ss_pred HHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHH
Q 013969 52 LGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVT 130 (433)
Q Consensus 52 i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~ 130 (433)
+.....+.... .++.+++.||+|+|+...++.+...++...+.. .. ..+.+.+++..++.|++.+.........
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF-IP----PSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-hC----cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43444444443 678899999999999999888766654433222 11 1235555556667777777666555566
Q ss_pred Hhhccc-------CC-chhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 131 NMRNFP-------LS-RGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 131 ~~~~Fp-------~~-RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+.+..+ +| .|...|+......+|.++.+.+...++
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll 386 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWIL 386 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666553 22 466667665555566655554444433
No 211
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.47 E-value=0.0079 Score=60.86 Aligned_cols=156 Identities=16% Similarity=0.087 Sum_probs=101.3
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhhccccccccccccC-----chHHHHHHHH-HHHHHHHHHHHHH--hcc-----cCch
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFP-----PWLVLFIGSL-ACFFGYGVLWLAV--SRT-----VESL 104 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~ig~~-l~~~g~~~~~~~~--~~~-----~~~~ 104 (433)
+..|++++..-++.....-.+....-+..|..+|+.+ +|...+++.. +.+.|........ -.. ....
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 5678888877777755555555566888999999999 8877766554 4444444433211 111 0011
Q ss_pred hHHHHH--HHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-Chh---HHHHHHH
Q 013969 105 PYWLLW--IALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSS---KLLLVLA 177 (433)
Q Consensus 105 ~~~~l~--~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~---~~l~~~a 177 (433)
..+... +...+.|+|.+..-++.+.++.+.-| ++|+++.+++-...=+|..+.+.++..++++ ... ..+...+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 233322 24556788888888888999999997 5799999999888767777777777777764 333 3444455
Q ss_pred HHHHHHHHHHHhhccc
Q 013969 178 VGVPAVCLVMMYFVRP 193 (433)
Q Consensus 178 ~~~~~v~l~~~~~~r~ 193 (433)
++..++.+++.+-+.+
T Consensus 166 ~i~~~l~~ia~wg~E~ 181 (403)
T PF03209_consen 166 LIALLLNLIALWGQEP 181 (403)
T ss_pred HHHHHHHHHHHHhccc
Confidence 5555556666655543
No 212
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.42 E-value=0.0023 Score=66.95 Aligned_cols=126 Identities=13% Similarity=0.049 Sum_probs=88.7
Q ss_pred ccccccc-cCchHHH--HHHHHHHHHHHHHHHHHHhcccC---chhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-C
Q 013969 66 PGLASNK-FPPWLVL--FIGSLACFFGYGVLWLAVSRTVE---SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-S 138 (433)
Q Consensus 66 ~G~l~Dr-~G~r~~~--~ig~~l~~~g~~~~~~~~~~~~~---~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~ 138 (433)
..++.|| .+++... .+|.++.++++..+.... .... ..++|.+....++.++|-.+..+.......+.-|+ .
T Consensus 336 ~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~-~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~ 414 (475)
T TIGR00924 336 WTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASI-WFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL 414 (475)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH-hhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH
Confidence 4466666 5556655 789999988888765421 1100 12467777777788888888877778888999996 5
Q ss_pred chhHHHHHHhhhhhHHHHHHHHHHHHhc-CChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 139 RGTVAGILKGYGGLSAAVFTEIYNMLLH-NSSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 139 RG~a~gi~~~~~glg~~i~~~l~~~~~~-~~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
||+.+|+.....++|..+.+.+...... .++..+...++++.+++.++..+..|
T Consensus 415 ~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 415 MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888777765543 35666667777766666665555444
No 213
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.40 E-value=0.0034 Score=66.29 Aligned_cols=153 Identities=12% Similarity=0.112 Sum_probs=85.4
Q ss_pred ChHhHHHHHHHHHH--hhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHH
Q 013969 11 PWVGLGAAVWVQIA--AGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACF 87 (433)
Q Consensus 11 ~w~~l~~~~l~~~~--~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~ 87 (433)
.+..+..+++++.. ......+-.|.+++-+..|.+... ...+....+.. ....+++.+.||+|||++++.|...+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~ 370 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMS 370 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHH
Confidence 34444444444322 222344456777877777776443 22222222222 234555899999999999999999999
Q ss_pred HHHHHHHHHHhcccC------chhHHHHH-HHHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHH
Q 013969 88 FGYGVLWLAVSRTVE------SLPYWLLW-IALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTE 159 (433)
Q Consensus 88 ~g~~~~~~~~~~~~~------~~~~~~l~-~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~ 159 (433)
++..+++........ ....+.+. .+..+.....++. ..+-....+-||.+ |+++.++..+...+...+...
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g-~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~ 449 (513)
T KOG0254|consen 371 ICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWG-PVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISF 449 (513)
T ss_pred HHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccc-cchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHH
Confidence 988877654332110 11111111 1222222222221 11224678999955 999999988877666655554
Q ss_pred HHHHHh
Q 013969 160 IYNMLL 165 (433)
Q Consensus 160 l~~~~~ 165 (433)
.+....
T Consensus 450 ~~~~~~ 455 (513)
T KOG0254|consen 450 FFPFIT 455 (513)
T ss_pred HHHHHH
Confidence 444443
No 214
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.39 E-value=0.0042 Score=63.70 Aligned_cols=126 Identities=6% Similarity=-0.067 Sum_probs=78.6
Q ss_pred hccHHHHHHHh--CCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 32 PLYSHSLKSVL--GFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 32 s~~~~~l~~~~--g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
..+.+.+.++. +.+....+...+...... ..-+++|++.||+++|+++.+..+...+..++... .. +...
T Consensus 252 ~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~--~~-----~~~~ 324 (410)
T TIGR00885 252 WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF--AG-----GHVG 324 (410)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH--cC-----ChHH
Confidence 34445543333 444444443333222333 34788899999999999988888877776665443 11 1222
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhc
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLH 166 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~ 166 (433)
+ ....+.|...+.+|+.......+.++++...+.++..+.. +|++++|++...+.+
T Consensus 325 ~-~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~-~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 325 L-YCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI-IGGGIVPPLQGFIID 380 (410)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH-hccchHHHHHHHHHH
Confidence 2 2233455566667777788889999977555444544443 999999999988776
No 215
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=97.38 E-value=0.0015 Score=65.01 Aligned_cols=124 Identities=14% Similarity=0.092 Sum_probs=73.9
Q ss_pred ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-ch
Q 013969 62 VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-RG 140 (433)
Q Consensus 62 ~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG 140 (433)
..++.|++.||+|||++|....+++++..+++..+...+ .-...++..++....+- .++.....+.||.. |+
T Consensus 397 GlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn---~~tvllf~arafisg~f----qvaYvYtPEVyPTavRa 469 (528)
T KOG0253|consen 397 GLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN---AYTVLLFTARAFISGAF----QVAYVYTPEVYPTAVRA 469 (528)
T ss_pred chhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc---hhHHHHHHHHHHHhchh----eEEEEecCcccchhhhh
Confidence 367889999999999999999999988777665543221 11222333444433222 22224557899965 99
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 141 TVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 141 ~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
+++|...+..-+|+.+ +|++.....-...--+...+ .+.+++.++.++++..
T Consensus 470 tgvGtcSsmaRIggI~-~p~iA~~~e~s~sl~i~vy~-~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIF-SPVIAMRAELSTSLPIFVYG-ALFILAGIAVCFFPIE 521 (528)
T ss_pred cchhhhhhHHhhhhhh-hhHHHHHhccceeehHHHHH-HHHHHHHHHheeeeec
Confidence 9999988887788854 55555322222111122222 2334445555555543
No 216
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.32 E-value=0.0086 Score=56.01 Aligned_cols=121 Identities=25% Similarity=0.200 Sum_probs=81.2
Q ss_pred ccHHHHHHHhCCCH--HHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHH
Q 013969 33 LYSHSLKSVLGFNQ--HQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLL 109 (433)
Q Consensus 33 ~~~~~l~~~~g~s~--~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l 109 (433)
...+.+..+++.+. .+.++......++... .++.|.+.||+|+|+.+..+......+....... . +...+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~ 97 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA--P---NVGLALL 97 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC--c---cchHHHH
Confidence 34445566666555 3667766666666644 6899999999999988888887644453332221 1 1125566
Q ss_pred HHHHHHHHhchhhhhhhHHHHHhhcccC--CchhHHHHHHhh-hhhHHHHHH
Q 013969 110 WIALCVATNSSAWLGTAVLVTNMRNFPL--SRGTVAGILKGY-GGLSAAVFT 158 (433)
Q Consensus 110 ~~~~~l~g~g~g~~~~~~~~~~~~~Fp~--~RG~a~gi~~~~-~glg~~i~~ 158 (433)
.+.+.+.|++.+..+........+++|+ +|+...++.... ..+|..+.+
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666667877777777778889999996 799999988774 445554444
No 217
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.20 E-value=0.0062 Score=63.04 Aligned_cols=158 Identities=22% Similarity=0.189 Sum_probs=103.2
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHhhccccccccccccC-----chHHHHHHHHHHHHHHHHHHHHHhcccCchhHH
Q 013969 33 LYSHSLKSVLGFNQHQLTMLGVANDIGENVGLLPGLASNKFP-----PWLVLFIGSLACFFGYGVLWLAVSRTVESLPYW 107 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~ 107 (433)
...+.+++++|++++|...+.....+...+-|+.|.+.|.+. ||.-+++|.++..++...+... .... .+..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~-~~~~--~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL-PASE--SSAA 87 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc-cccc--chhh
Confidence 344558999999999999988877777778999999999975 5556667777776666555442 2211 1233
Q ss_pred HHHHHHHHHHhchhhhhhhHHHHHhhc---ccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHH
Q 013969 108 LLWIALCVATNSSAWLGTAVLVTNMRN---FPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAV 183 (433)
Q Consensus 108 ~l~~~~~l~g~g~g~~~~~~~~~~~~~---Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v 183 (433)
...++.++..+|..+.+..+=..+.|. -|+.||.-.+.......+|+.+...+...+.+. +.+..+.+.+.++.+.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 344455666777777777765554444 465578877777777778887776666555543 3444445555666655
Q ss_pred HHHHHhhccc
Q 013969 184 CLVMMYFVRP 193 (433)
Q Consensus 184 ~l~~~~~~r~ 193 (433)
.+...+..++
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 5555555553
No 218
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.13 E-value=0.0012 Score=67.46 Aligned_cols=166 Identities=14% Similarity=0.087 Sum_probs=101.6
Q ss_pred HhHHHHHHHHH-HhhhhhhhhccHHHHHHHhCCCHHHHHH-----HHHHHH----HHhh-ccccccccccccCchHHHHH
Q 013969 13 VGLGAAVWVQI-AAGNAYNFPLYSHSLKSVLGFNQHQLTM-----LGVAND----IGEN-VGLLPGLASNKFPPWLVLFI 81 (433)
Q Consensus 13 ~~l~~~~l~~~-~~g~~y~~s~~~~~l~~~~g~s~~~~~~-----i~~~~~----~~~~-~~~~~G~l~Dr~G~r~~~~i 81 (433)
..++.....++ .....|..++++..+-++.|+.+++-.. ..-... .+.+ ..++...+.|+.||+++.+-
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 44555555554 3467899999999999988887765443 111111 1222 25667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCchhHHHHHH-HHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHH
Q 013969 82 GSLACFFGYGVLWLAVSRTVESLPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTE 159 (433)
Q Consensus 82 g~~l~~~g~~~~~~~~~~~~~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~ 159 (433)
|.+++++.++.++....+......+..++. ..++.-+|-+ +......++.||.+ ||++-|+..+.-=+|+.+...
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 999999887766554432221111222332 2333333331 22234568999966 999999987665577777665
Q ss_pred HHHHHhc-----C-ChhHHHHHHHHHHH
Q 013969 160 IYNMLLH-----N-SSSKLLLVLAVGVP 181 (433)
Q Consensus 160 l~~~~~~-----~-~~~~~l~~~a~~~~ 181 (433)
.+...-+ . ..+..+.+.+++..
T Consensus 461 ~F~~~t~~~yp~~~g~~~v~~i~~~~~~ 488 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIGVRNVFIILAGCML 488 (538)
T ss_pred HhhHhhhccCCccccchHHHHHHHHHHH
Confidence 5555544 2 23455555555443
No 219
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.09 E-value=0.011 Score=64.20 Aligned_cols=130 Identities=14% Similarity=0.100 Sum_probs=83.4
Q ss_pred HHHHHHHhCCCHHHHHHH-HHHHHHHhhccccccccccc-cCchHHHHHHHHHHHHHHHHHHHHHhcccC-chhHHHHHH
Q 013969 35 SHSLKSVLGFNQHQLTML-GVANDIGENVGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTVE-SLPYWLLWI 111 (433)
Q Consensus 35 ~~~l~~~~g~s~~~~~~i-~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~-~~~~~~l~~ 111 (433)
...+.+.+|++.+++..+ .....+..+...++|+++|+ +|+++++.++.++..+|+.+++........ .......++
T Consensus 11 vlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~ 90 (654)
T TIGR00926 11 VLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLL 90 (654)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHH
Confidence 334677899999988774 44444444569999999998 899999999999999999877652111000 001122333
Q ss_pred HHHHHHhchhhhhhhHHHHHhhcccC-C---chhHHHHHHhhhhhHHHHHHHHHHHH
Q 013969 112 ALCVATNSSAWLGTAVLVTNMRNFPL-S---RGTVAGILKGYGGLSAAVFTEIYNML 164 (433)
Q Consensus 112 ~~~l~g~g~g~~~~~~~~~~~~~Fp~-~---RG~a~gi~~~~~glg~~i~~~l~~~~ 164 (433)
...+..+|.|..-.+......+.|++ + |-....+.-.+.++|+.+.+++...+
T Consensus 91 gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l 147 (654)
T TIGR00926 91 GLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPIL 147 (654)
T ss_pred HHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455567776665566777888863 2 44555555555567876665555543
No 220
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.98 E-value=0.033 Score=55.54 Aligned_cols=162 Identities=17% Similarity=0.093 Sum_probs=99.4
Q ss_pred HhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHh-hccccccccccc-cCchHHHHHHHHHHHHHHHHHHHHHhccc
Q 013969 24 AAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 24 ~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr-~G~r~~~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
-+...|+.-.+.|++-.+.|+|..+.+...+...+.. ..++..-.+.+| -..|+......+.+.+|++.+.+.-..
T Consensus 220 qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~-- 297 (395)
T COG2807 220 QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQ-- 297 (395)
T ss_pred hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhh--
Confidence 3556888888999998899999999998655555554 346666677775 455666666667777788877653111
Q ss_pred CchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC--CchhHHHHHHhhhhhHHHHHHHHHHHHhc--CChhHHHHHHH
Q 013969 102 ESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL--SRGTVAGILKGYGGLSAAVFTEIYNMLLH--NSSSKLLLVLA 177 (433)
Q Consensus 102 ~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~--~RG~a~gi~~~~~glg~~i~~~l~~~~~~--~~~~~~l~~~a 177 (433)
. +.+. .++.|+|.|..+.-++..+....++ .-+.-.|+..+.--+=++..|.+...+.+ ++|..-+..++
T Consensus 298 ---~-~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~ 371 (395)
T COG2807 298 ---L-PILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLA 371 (395)
T ss_pred ---H-HHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHH
Confidence 1 1111 3678888888887777777777653 23444444433322333444555555554 35555555555
Q ss_pred HHHHHHHHHHHhhccc
Q 013969 178 VGVPAVCLVMMYFVRP 193 (433)
Q Consensus 178 ~~~~~v~l~~~~~~r~ 193 (433)
.+.+++.+.+..+=|+
T Consensus 372 ~~~i~m~i~Gl~a~r~ 387 (395)
T COG2807 372 LATLLMLIFGLRAGRN 387 (395)
T ss_pred HHHHHHHHHHhhcchh
Confidence 5555555555444433
No 221
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.97 E-value=0.015 Score=59.10 Aligned_cols=126 Identities=17% Similarity=0.123 Sum_probs=69.7
Q ss_pred hhhhhhccHHHHHHHhCCCHHHH----HHHHHHHHHH-hhccccccccccccCchHHHHHHHHHHHH-HHHHHHHHHhcc
Q 013969 27 NAYNFPLYSHSLKSVLGFNQHQL----TMLGVANDIG-ENVGLLPGLASNKFPPWLVLFIGSLACFF-GYGVLWLAVSRT 100 (433)
Q Consensus 27 ~~y~~s~~~~~l~~~~g~s~~~~----~~i~~~~~~~-~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~-g~~~~~~~~~~~ 100 (433)
+.+.|++|.......-|.+..+. +...+...+. +..+|+.|.++|+.|+||...--....++ ..+.+++...+
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~- 112 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPG- 112 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCC-
Confidence 45667777655544544444433 2323333333 34699999999999999987655554444 33433432111
Q ss_pred cCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHH
Q 013969 101 VESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAV 156 (433)
Q Consensus 101 ~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i 156 (433)
..++...++..+..++...........+.+..++ +-|+..++.-+.--+|+.+
T Consensus 113 ---s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i 166 (438)
T COG2270 113 ---SYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVI 166 (438)
T ss_pred ---chHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchH
Confidence 1244444466666666665555556777777765 3455544432322255544
No 222
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.97 E-value=6.5e-06 Score=84.85 Aligned_cols=162 Identities=18% Similarity=0.192 Sum_probs=88.6
Q ss_pred hhhhccHHHHHHHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHH--HHHhcccC-ch
Q 013969 29 YNFPLYSHSLKSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLW--LAVSRTVE-SL 104 (433)
Q Consensus 29 y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~--~~~~~~~~-~~ 104 (433)
+....|.+.+.+..+.+.. ........+.. ...+++..+.||+|||++++++.++.++..+.+. .......+ ..
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445566777777888776 11122212222 2356667999999999999999998887766553 10111100 00
Q ss_pred hHHHHHH-HHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHhcCCh-hHHHHHHHHHHH
Q 013969 105 PYWLLWI-ALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLLHNSS-SKLLLVLAVGVP 181 (433)
Q Consensus 105 ~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~-~~~l~~~a~~~~ 181 (433)
+.+.+.. .......+.+. .........|.||. .|+++.|+......+++.+.+.+...+.+... ..+..+.+.+..
T Consensus 348 ~~~~i~~~~l~~~~~~~g~-~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~ 426 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGW-GPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCL 426 (451)
T ss_pred ccccceeeeeccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHH
Confidence 1222211 11111222221 12223566999995 49999999888776777776655555444322 344444444444
Q ss_pred HHHHHHHhhccc
Q 013969 182 AVCLVMMYFVRP 193 (433)
Q Consensus 182 ~v~l~~~~~~r~ 193 (433)
+..+...+++++
T Consensus 427 i~~i~~~~~lpE 438 (451)
T PF00083_consen 427 IAIIFVYFFLPE 438 (451)
T ss_pred HHHhheeEEEee
Confidence 444444444444
No 223
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.80 E-value=0.005 Score=64.63 Aligned_cols=136 Identities=17% Similarity=0.131 Sum_probs=83.7
Q ss_pred hhhhhhhhccHHHHHHH-hCCCHHHHHHHHHHHHHHhhc-cccccccccc----cCchHHHHHHHHHHHH-HHHHHHHHH
Q 013969 25 AGNAYNFPLYSHSLKSV-LGFNQHQLTMLGVANDIGENV-GLLPGLASNK----FPPWLVLFIGSLACFF-GYGVLWLAV 97 (433)
Q Consensus 25 ~g~~y~~s~~~~~l~~~-~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr----~G~r~~~~ig~~l~~~-g~~~~~~~~ 97 (433)
-...|+++.+.|.+.++ .|+|..+.+.+++...++.++ .+++|.+.|| +.+|........++.. |+..+...
T Consensus 286 ~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~- 364 (495)
T KOG2533|consen 286 KLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAA- 364 (495)
T ss_pred hhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 35688899899987555 679999999988887777754 8999999999 6666666666655544 44433221
Q ss_pred hcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc--CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC
Q 013969 98 SRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP--LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN 167 (433)
Q Consensus 98 ~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp--~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~ 167 (433)
. . ....+...+.+..+.+.....+..-...+.. .||-...++...+.+.++++.++++......
T Consensus 365 -~---~--~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap 430 (495)
T KOG2533|consen 365 -A---V--LPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAP 430 (495)
T ss_pred -c---c--chHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCc
Confidence 1 1 1112221122222222223333444555554 3466666666677788888888887765543
No 224
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.65 E-value=0.028 Score=49.75 Aligned_cols=88 Identities=19% Similarity=0.062 Sum_probs=65.8
Q ss_pred ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-Cch
Q 013969 62 VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRG 140 (433)
Q Consensus 62 ~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG 140 (433)
..++++.+.+++|+|+.+.+|.+...+-...+.. ++.|.++...++.|+|.+..+++.-..+.+.-.+ +|+
T Consensus 53 s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~--------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~ 124 (156)
T PF05978_consen 53 SCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY--------PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIG 124 (156)
T ss_pred HHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHh
Confidence 3566788999999999999999987754332211 2356677788899999999998887888888764 589
Q ss_pred hHHHHHHhhhhhHHHHH
Q 013969 141 TVAGILKGYGGLSAAVF 157 (433)
Q Consensus 141 ~a~gi~~~~~glg~~i~ 157 (433)
+-.|+..+....+..+.
T Consensus 125 ~~~~ifw~i~~~s~i~G 141 (156)
T PF05978_consen 125 RNTGIFWAIFQSSLIFG 141 (156)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 98888777766655443
No 225
>PRK11462 putative transporter; Provisional
Probab=96.61 E-value=0.091 Score=54.75 Aligned_cols=42 Identities=5% Similarity=-0.194 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHH
Q 013969 50 TMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYG 91 (433)
Q Consensus 50 ~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~ 91 (433)
+.+.....+... ..++++++.||+|.|++...+.....+..+
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~ 308 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISL 308 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 334444444443 478899999999999987765554444333
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.58 E-value=0.036 Score=57.50 Aligned_cols=122 Identities=20% Similarity=0.106 Sum_probs=80.9
Q ss_pred HHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHH
Q 013969 39 KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVAT 117 (433)
Q Consensus 39 ~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 117 (433)
+-..|.+..+..........+.+. .++..++.+|+|+|++..++.++..+++.++++.. ..+.+.+++..++.+
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~-----~~~~~l~~~~~~i~~ 338 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP-----AGSVVLIVVALIIAG 338 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc-----CcchHHHHHHHHHHH
Confidence 334566555555555555555554 78899999999999999999999999999888743 124566666777777
Q ss_pred hchhhhhhhHHHHH------hhcccCC--chhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 118 NSSAWLGTAVLVTN------MRNFPLS--RGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 118 ~g~g~~~~~~~~~~------~~~Fp~~--RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+|.+..+...-..+ -||-..+ -|...|+..-..=+|.++...+....+
T Consensus 339 ~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 339 VGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred HHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776654443333 4565432 377666655555566666655554443
No 227
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.51 E-value=0.0064 Score=47.09 Aligned_cols=53 Identities=23% Similarity=0.291 Sum_probs=43.4
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLAC 86 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~ 86 (433)
|.+-..++.|+|..|++.+..+..+... ..|+.|.++||+|.++.++.+...+
T Consensus 22 fl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 22 FLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4444566799999999998877767665 5899999999999999998877654
No 228
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.37 E-value=0.04 Score=57.55 Aligned_cols=161 Identities=16% Similarity=0.155 Sum_probs=97.1
Q ss_pred hhhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCc---------hHHHHHHHHHHHHHHHHHHH
Q 013969 27 NAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPP---------WLVLFIGSLACFFGYGVLWL 95 (433)
Q Consensus 27 ~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~---------r~~~~ig~~l~~~g~~~~~~ 95 (433)
..|.+-.|.|. +++.+|++-.+.++++..-.+.+. +.+++|.++||.-. |..-.++....++.++.+.+
T Consensus 273 ~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~ 352 (466)
T KOG2532|consen 273 GFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAF 352 (466)
T ss_pred HHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeee
Confidence 46777788888 588899999999999888888885 59999999999755 23333333333333332222
Q ss_pred HHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcC----ChhH
Q 013969 96 AVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHN----SSSK 171 (433)
Q Consensus 96 ~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~----~~~~ 171 (433)
.+. ......+.++.+..+ ..|+......+.....=|++-+..+|+.+....+.+.+.|.+...+.++ .|+.
T Consensus 353 --~~~--~~~~~a~~~l~~~~~-~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~ 427 (466)
T KOG2532|consen 353 --TSD--EHRLLAVILLTIAIG-LSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRI 427 (466)
T ss_pred --cCC--CcchHHHHHHHHHHH-HcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHH
Confidence 111 112222222211111 1122222222333333688999999999998888888877777777743 3556
Q ss_pred HHHHHHHHHHHHHHHHHhhcc
Q 013969 172 LLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 172 ~l~~~a~~~~~v~l~~~~~~r 192 (433)
.+++.+++..+..++..++-+
T Consensus 428 VF~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 428 VFLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred HHHHHHHHHHHhchheeEeec
Confidence 666666665555544444433
No 229
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.36 E-value=0.086 Score=53.31 Aligned_cols=144 Identities=13% Similarity=0.055 Sum_probs=97.1
Q ss_pred HHHHHHH-HHhhhhhhhhccHHHHHHH-hCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHH
Q 013969 16 GAAVWVQ-IAAGNAYNFPLYSHSLKSV-LGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGV 92 (433)
Q Consensus 16 ~~~~l~~-~~~g~~y~~s~~~~~l~~~-~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~ 92 (433)
..+.+.+ +-.|..-..+.+.+.+..+ .|.+..|.+.+.+....+... =+.+-++..|+-+.|.+...++...+-++.
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~ 318 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLA 318 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 3444444 4467666666677776555 889988888877776666654 456677888999999998877665554443
Q ss_pred HHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHhcCC
Q 013969 93 LWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLLHNS 168 (433)
Q Consensus 93 ~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~~ 168 (433)
..+ .+ +.+.++.. .+.|...+.+++.......+..|++-..+.+++.++ .+|+++.|++....-+..
T Consensus 319 ~~l--~~-----g~v~~~~l-~~ig~F~simfPTIfslal~~l~~~ts~~s~~l~ma-ivGGAiiP~l~G~i~d~~ 385 (422)
T COG0738 319 VAL--IG-----GVVALYAL-FLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVMA-IVGGAIIPPLQGVIADMF 385 (422)
T ss_pred HHH--hc-----ChHHHHHH-HHHHHHhHHHHHHHHHHHHhccCccccccceeeeeh-eecchHHHHHHHHHHHhh
Confidence 333 22 24444432 345556777888888889999997655555555444 599999999998877643
No 230
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.25 E-value=0.026 Score=60.46 Aligned_cols=148 Identities=16% Similarity=0.173 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHhhh-hhhhhccHHHH-HHHhCCCHH---HHHHHHHHHHHHhhc-cccccccccccCc-hHHHHHHHHHH
Q 013969 14 GLGAAVWVQIAAGN-AYNFPLYSHSL-KSVLGFNQH---QLTMLGVANDIGENV-GLLPGLASNKFPP-WLVLFIGSLAC 86 (433)
Q Consensus 14 ~l~~~~l~~~~~g~-~y~~s~~~~~l-~~~~g~s~~---~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~-r~~~~ig~~l~ 86 (433)
.+.+.+++.+..|. .|....+-|+. ...|+-+.. +.++.+....++..+ +++.|.+.-++++ |..+++|.+++
T Consensus 311 ~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ 390 (599)
T PF06609_consen 311 GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLM 390 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence 34444444444554 56666666664 545655542 455665555565543 6777888776654 44556777776
Q ss_pred HHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 87 FFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 87 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
.+++-+++.. .. ++ ....+.+.++.|+|.|+.-.++...++-.-|+ +-|++.|++.+...+|++++..++...+
T Consensus 391 ta~~Gama~~-~~--~n--~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 391 TAFCGAMAAV-RP--DN--KNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHHHHHHc-cC--CC--cchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 6555544432 11 12 22334567788888887766666655555674 5899999999999999999988888877
Q ss_pred c
Q 013969 166 H 166 (433)
Q Consensus 166 ~ 166 (433)
.
T Consensus 466 ~ 466 (599)
T PF06609_consen 466 T 466 (599)
T ss_pred H
Confidence 4
No 231
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.24 E-value=0.013 Score=46.24 Aligned_cols=68 Identities=21% Similarity=0.204 Sum_probs=60.8
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHH
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWL 95 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~ 95 (433)
.|.|+...|.++++.++|.++.+++.+...+|..+ .+...++.++..+|+.+.++.+...+....+.+
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 67888899999999999999999999999999876 788899999999999999999998888876665
No 232
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.24 E-value=0.11 Score=54.83 Aligned_cols=128 Identities=14% Similarity=0.102 Sum_probs=80.7
Q ss_pred cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-chh
Q 013969 63 GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-RGT 141 (433)
Q Consensus 63 ~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~ 141 (433)
....+.+.||+|||.....+.++..++++.+....... ..+.......++..+.+..+........+.+|+. |..
T Consensus 367 ~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~ 442 (521)
T KOG0255|consen 367 YFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL----GGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNT 442 (521)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 44558999999999999999999999998776643221 1112333334444455555666678889999965 999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 142 VAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 142 a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
+.|...+..-+|+++.+.+....-.......+...+....+.++++..+++..
T Consensus 443 ~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet 495 (521)
T KOG0255|consen 443 AVGAISAAARLGSILAPLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPET 495 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCccc
Confidence 99999888778876665554332221111111113555555555555555443
No 233
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.09 E-value=0.018 Score=60.11 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=91.5
Q ss_pred HHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHH
Q 013969 39 KSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVAT 117 (433)
Q Consensus 39 ~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g 117 (433)
.|+.+-...-.+........+-+ +-++.++|..|+|.-+++.+|.....+=++.++.+ .+.|+..-.-++.|
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-------~n~W~vLPieilqg 470 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-------QNPWMVLPIEILQG 470 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-------cCchheeeHHHHHH
Confidence 44555333333322332223333 36788999999999999999988888776655542 24677766888999
Q ss_pred hchhhhhhhHHHHHhhcccCC-chhHHHHHHhh-hhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHHHHH
Q 013969 118 NSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGY-GGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVPAVC 184 (433)
Q Consensus 118 ~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~-~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~~v~ 184 (433)
+..+..|.+....+...-|++ |.++.|++.+. .|+|=.+.+.+...++.- +.+.++...++.+++++
T Consensus 471 it~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 471 ITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTL 540 (618)
T ss_pred HHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHH
Confidence 989999999999999999866 99999998654 455555555555555443 33444555555444433
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.08 E-value=0.18 Score=51.26 Aligned_cols=111 Identities=16% Similarity=0.174 Sum_probs=83.9
Q ss_pred HHHhCCCHHHHHHHHHHHHHHhhc-ccccccccc-ccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHH
Q 013969 39 KSVLGFNQHQLTMLGVANDIGENV-GLLPGLASN-KFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVA 116 (433)
Q Consensus 39 ~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~D-r~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 116 (433)
.+.||+|.+|.+.++.....|... ....|++.. |.+++++..+|++...+++.+.... +... +.|.+....++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a--~~~~--~~~~~~~~~~l~ 311 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA--GPLG--SPWLFRPGVFLL 311 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH--Hhcc--cchHHHHHHHHH
Confidence 678999999999888877778754 556777555 8999999999999988887765542 3222 356676677889
Q ss_pred HhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhH
Q 013969 117 TNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLS 153 (433)
Q Consensus 117 g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg 153 (433)
|+|.|.....++..+.+.-+ ++.|+.+|.--....++
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA 349 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence 99999888888888888885 67888888764444333
No 235
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.63 E-value=0.068 Score=55.77 Aligned_cols=123 Identities=15% Similarity=0.176 Sum_probs=76.5
Q ss_pred hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCc
Q 013969 61 NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSR 139 (433)
Q Consensus 61 ~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~R 139 (433)
+.++..|.+.||+|||..+.+..+...+.-+..-+. .+|.+.+....++. +..+......++..-. ++|
T Consensus 77 i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~--------~~~~~~~~~l~g~~--~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 77 ISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ--------GYWFFLLLGLSGGF--SAIFSVGFAYVADISSEEER 146 (463)
T ss_pred HHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH--------HHHHhhhcccccch--hhhhhhhhhheeeccchhHH
Confidence 458999999999999999999988888766644331 13333322222221 2233444555666665 469
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHH-Hhhccc
Q 013969 140 GTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVM-MYFVRP 193 (433)
Q Consensus 140 G~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l~~-~~~~r~ 193 (433)
-...|++.+.++++..+.+.+.....+.-.-.....++....++.++- .+++++
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~E 201 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPE 201 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccc
Confidence 999999999888888888777776665432233333444444343333 344443
No 236
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.52 E-value=0.079 Score=55.27 Aligned_cols=120 Identities=23% Similarity=0.323 Sum_probs=88.8
Q ss_pred HHHHhCCCHHHHHHH-HHHHHHHhhcc-ccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTML-GVANDIGENVG-LLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCV 115 (433)
Q Consensus 38 l~~~~g~s~~~~~~i-~~~~~~~~~~~-~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 115 (433)
++..++|+..+.+.+ +....++.... ...+.+...+|-|+++.+|.+.-.+....+++. +..|+++...++
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-------~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-------TETWMMFAAGVV 340 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-------ccchhhhHHHHH
Confidence 578899999999974 44444444443 444578888999999999999999888877663 235777776665
Q ss_pred HHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 116 ATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 116 ~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
.++ .+..++..-...+++-+ +++|++.++....-++++.+.+.+++.++
T Consensus 341 ~~~-~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 341 VAL-AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HHh-hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 543 34455555566777765 67999999999999899888888887765
No 237
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.15 E-value=0.81 Score=46.84 Aligned_cols=158 Identities=11% Similarity=0.020 Sum_probs=99.0
Q ss_pred hccHHHHHHH-hCCCHHHHHH-HHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHH
Q 013969 32 PLYSHSLKSV-LGFNQHQLTM-LGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWL 108 (433)
Q Consensus 32 s~~~~~l~~~-~g~s~~~~~~-i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~ 108 (433)
+...|.+.+. .|++..|+.- +.-...-... +.++...+.|..|.|++++++++...+.+.++-+. .+.+.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~-------~sv~~ 96 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG-------TSVLA 96 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-------CcHHH
Confidence 3445556665 8999999976 6655555554 47889999999999999999999887777765431 23556
Q ss_pred HHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHH
Q 013969 109 LWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIYNMLLHN--SSSKLLLVLAVGVPAVCL 185 (433)
Q Consensus 109 l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~~~~~~~--~~~~~l~~~a~~~~~v~l 185 (433)
+-+..+.-|++.+. ..+....+-..-| ++-=++.+...+..-+|-.+.+.+...+... ..-..+..+++....+++
T Consensus 97 mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~ 175 (412)
T PF01770_consen 97 MQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL 175 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 65655666655532 2222233333335 3445566666666545544544555544442 233445567777777888
Q ss_pred HHHhhcccCCCC
Q 013969 186 VMMYFVRPCTPA 197 (433)
Q Consensus 186 ~~~~~~r~~~~~ 197 (433)
+..++++.+++.
T Consensus 176 ~~~~fLP~~~~S 187 (412)
T PF01770_consen 176 LIALFLPMPKRS 187 (412)
T ss_pred HHHHHcCCCCcc
Confidence 888888876553
No 238
>PRK03612 spermidine synthase; Provisional
Probab=94.49 E-value=2.3 Score=45.24 Aligned_cols=153 Identities=14% Similarity=0.011 Sum_probs=72.6
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHH---HHHHHHHHHHHHhcccCchhHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLA---CFFGYGVLWLAVSRTVESLPYWLLWIAL 113 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l---~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 113 (433)
+.-.+|-+..+.+.+.+....++.. +.++|++.++ ..|+...+-..+ ..+..+++.... ... ......++...
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~-~~~~~~~~e~~i~l~~~~~~~ll~~~~-~~~-~~~~~~~~~~~ 117 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD-AAAGFVAVELLLALLGGLSALILYAAF-AFQ-GLSRLLLYVLV 117 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHH
Confidence 4556787777777766666677754 6777776533 233322221111 111111111111 100 00011112223
Q ss_pred HHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHHHHHHHHh-c-CChhHHHHHHHHHHHHHHHHHHhhc
Q 013969 114 CVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFTEIYNMLL-H-NSSSKLLLVLAVGVPAVCLVMMYFV 191 (433)
Q Consensus 114 ~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~~l~~~~~-~-~~~~~~l~~~a~~~~~v~l~~~~~~ 191 (433)
++.++-.|+..........+.-.++-|...|-+-+...+|+.+.+.+...++ + -+.....+..+.+.++++++..+..
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWLF 197 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444544332233333222223466677776777777777776666544 3 2344455566666666665555544
Q ss_pred cc
Q 013969 192 RP 193 (433)
Q Consensus 192 r~ 193 (433)
|.
T Consensus 198 ~~ 199 (521)
T PRK03612 198 RH 199 (521)
T ss_pred Hh
Confidence 43
No 239
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.48 E-value=0.11 Score=52.64 Aligned_cols=137 Identities=14% Similarity=0.093 Sum_probs=86.1
Q ss_pred HHHHhCCCHHHHHHHHHHHHHHhhc-cccccccccccC--chHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHH
Q 013969 38 LKSVLGFNQHQLTMLGVANDIGENV-GLLPGLASNKFP--PWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALC 114 (433)
Q Consensus 38 l~~~~g~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G--~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 114 (433)
+.|.+..+.-++++...-..+...+ ..+.|.+.||+| ++.....|.++.+......-++ .++.++++-.+
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~-------~~~~~L~vp~~ 369 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFA-------TSIAQLWVPNF 369 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhh-------hhHHHHhhhhH
Confidence 4666775555787755544455544 789999999999 7666666666665443332221 13556666444
Q ss_pred HHHhchhhhhhhHHHHHhhccc-C------CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHHHHHHHHHHH
Q 013969 115 VATNSSAWLGTAVLVTNMRNFP-L------SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKLLLVLAVGVP 181 (433)
Q Consensus 115 l~g~g~g~~~~~~~~~~~~~Fp-~------~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~l~~~a~~~~ 181 (433)
..|++.+.+++..+.+....-. + --|.+-++....+++|.++.|-+...+.+. +..+...+.++...
T Consensus 370 ~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~ 444 (464)
T KOG3764|consen 370 GLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNL 444 (464)
T ss_pred HHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHH
Confidence 4555666666655555555443 2 248899999999999998887776666653 34455555555433
No 240
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.45 E-value=0.71 Score=48.01 Aligned_cols=129 Identities=20% Similarity=0.299 Sum_probs=84.6
Q ss_pred hhhhccHHHH--HHHhCCCHHHHHH-HHHHHHHHhhc-cccccccc---cccCchHHHHHHHHHHHHHHHHHHHHHhccc
Q 013969 29 YNFPLYSHSL--KSVLGFNQHQLTM-LGVANDIGENV-GLLPGLAS---NKFPPWLVLFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 29 y~~s~~~~~l--~~~~g~s~~~~~~-i~~~~~~~~~~-~~~~G~l~---Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
|-.++|-..+ ....+.+....-. .+....++.+. +.+.+.+. +|+|+++++.++.++..+++.+..+......
T Consensus 258 f~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~da 337 (461)
T KOG3098|consen 258 FWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDA 337 (461)
T ss_pred HHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccC
Confidence 3344554443 2233433333333 23333344433 55566554 6699999999999999998887665332211
Q ss_pred C-----------chhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHH
Q 013969 102 E-----------SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVF 157 (433)
Q Consensus 102 ~-----------~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~ 157 (433)
+ .+++....+..++.|++-+...+.....+...+|++|-.+..+...+.++++.+.
T Consensus 338 p~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 338 PLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred CCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 1 1123344557888899988888888888999999999999999999988888664
No 241
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=94.33 E-value=0.71 Score=48.65 Aligned_cols=101 Identities=13% Similarity=0.110 Sum_probs=62.6
Q ss_pred ccccccccccccC-----chH--HHHHHHHHHHHHHHHHHHHHhcccC--chhHHHHHHHHHHHHhchhhhhhhHHHHHh
Q 013969 62 VGLLPGLASNKFP-----PWL--VLFIGSLACFFGYGVLWLAVSRTVE--SLPYWLLWIALCVATNSSAWLGTAVLVTNM 132 (433)
Q Consensus 62 ~~~~~G~l~Dr~G-----~r~--~~~ig~~l~~~g~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~ 132 (433)
.+|+.+++-.|.. |.. =..+|.++.+++++.+........+ ..+.+.+.+..++..+|--+..+..+..++
T Consensus 324 l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~ 403 (493)
T PRK15462 324 CGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQIT 403 (493)
T ss_pred HHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHH
Confidence 3566566544431 111 1668999999999887653322111 123455556556667776566666688899
Q ss_pred hcccCC-chhHHHHHHhhh-hhHHHHHHHHHH
Q 013969 133 RNFPLS-RGTVAGILKGYG-GLSAAVFTEIYN 162 (433)
Q Consensus 133 ~~Fp~~-RG~a~gi~~~~~-glg~~i~~~l~~ 162 (433)
|.-|+| ||..+|+-.... .+|..+.+.+..
T Consensus 404 ~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~ 435 (493)
T PRK15462 404 RIEIPGVTGVLTGIYMLLSGAIANYLAGVIAD 435 (493)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999976 999999975422 356555555444
No 242
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=94.07 E-value=1.1 Score=46.95 Aligned_cols=130 Identities=9% Similarity=-0.062 Sum_probs=77.3
Q ss_pred cccccccccccCc-hHHHHHHHHHHHHHHHHHHHHHh--c---c--------cCchh-HHHHHHHHHHHHhchhhhhhhH
Q 013969 63 GLLPGLASNKFPP-WLVLFIGSLACFFGYGVLWLAVS--R---T--------VESLP-YWLLWIALCVATNSSAWLGTAV 127 (433)
Q Consensus 63 ~~~~G~l~Dr~G~-r~~~~ig~~l~~~g~~~~~~~~~--~---~--------~~~~~-~~~l~~~~~l~g~g~g~~~~~~ 127 (433)
+++--++.+|+|+ |++-.++.++.+++.....+.-. + . .+... .+...+...+.|+.-+..+..+
T Consensus 322 s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siP 401 (477)
T TIGR01301 322 SIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIP 401 (477)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHh
Confidence 4556778899996 66668887877777776654211 0 0 00001 2444455566777777888888
Q ss_pred HHHHhhccc---CCchhHHHHHHhhhhhHHHHHHHHHHH---HhcCChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 128 LVTNMRNFP---LSRGTVAGILKGYGGLSAAVFTEIYNM---LLHNSSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 128 ~~~~~~~Fp---~~RG~a~gi~~~~~glg~~i~~~l~~~---~~~~~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
..++++.-| ++.|.-+|+.+...-+...+.+..... ++.++....+.+.++..++.++.+.+.++
T Consensus 402 fal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~ 472 (477)
T TIGR01301 402 FALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLP 472 (477)
T ss_pred HHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCC
Confidence 888888887 346999999988876666555443333 22333334444444433333444444443
No 243
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.04 E-value=0.79 Score=50.10 Aligned_cols=117 Identities=14% Similarity=0.044 Sum_probs=79.4
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHHHHHHHHHH--Hhcc----------
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLA--VSRT---------- 100 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~--~~~~---------- 100 (433)
...++++.|+++.++.+++.....++.. ...+..+..-|.=+-+.+.+|.+++++|.+++.+- ..+.
T Consensus 119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~ 198 (735)
T KOG3626|consen 119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ 198 (735)
T ss_pred hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence 3456899999999999999888888885 47888888888878888889999999988876542 0000
Q ss_pred --------------------------------cCchhHHHHH-HHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHH
Q 013969 101 --------------------------------VESLPYWLLW-IALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGIL 146 (433)
Q Consensus 101 --------------------------------~~~~~~~~l~-~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~ 146 (433)
..+..+|.++ +..++.|+|....++..+..+=++-. ++-.+-+|+.
T Consensus 199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~ 278 (735)
T KOG3626|consen 199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGIL 278 (735)
T ss_pred cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHH
Confidence 0001134333 35677788887777666666666654 3355556665
Q ss_pred Hhhh
Q 013969 147 KGYG 150 (433)
Q Consensus 147 ~~~~ 150 (433)
.+..
T Consensus 279 ~~~~ 282 (735)
T KOG3626|consen 279 YSMA 282 (735)
T ss_pred HHHH
Confidence 4443
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=93.97 E-value=9.4 Score=40.04 Aligned_cols=151 Identities=6% Similarity=-0.088 Sum_probs=87.6
Q ss_pred hHhHHHHHHHHHHhhhhhhhhccHHHHHHHhCCCH-----HHHHHHHHHHHHHh-h-ccccccccccccCchHHHHHHHH
Q 013969 12 WVGLGAAVWVQIAAGNAYNFPLYSHSLKSVLGFNQ-----HQLTMLGVANDIGE-N-VGLLPGLASNKFPPWLVLFIGSL 84 (433)
Q Consensus 12 w~~l~~~~l~~~~~g~~y~~s~~~~~l~~~~g~s~-----~~~~~i~~~~~~~~-~-~~~~~G~l~Dr~G~r~~~~ig~~ 84 (433)
|..++...+..++....|. ..-++++.+..++ +.+.++-+...+.+ . +.++.+++.+|++++++.-+-..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~---iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYT---ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 4455555566666655554 3456788887743 45666666555554 3 37889999999999999888777
Q ss_pred HHHHHHHHHHHHHhcccCc--h----------------------hHHHHHHHHHHHHhchhhhhh-hHHHHHhhccc-CC
Q 013969 85 ACFFGYGVLWLAVSRTVES--L----------------------PYWLLWIALCVATNSSAWLGT-AVLVTNMRNFP-LS 138 (433)
Q Consensus 85 l~~~g~~~~~~~~~~~~~~--~----------------------~~~~l~~~~~l~g~g~g~~~~-~~~~~~~~~Fp-~~ 138 (433)
.+.+-+.+++......... + +.|...++.++.-+=...+.. .--..+.+.+. ++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 6666666665542211000 0 123333333333221112211 11245677786 44
Q ss_pred chhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 139 RGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 139 RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
-.+=.++...+.++|..+.+.+...+.
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556766777788888777776655
No 245
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=92.88 E-value=0.41 Score=52.07 Aligned_cols=67 Identities=12% Similarity=0.119 Sum_probs=48.2
Q ss_pred hhhhhhhhccHHH-HHHHhCCCHHHHHHHHHHHHH-Hhh-ccccccccccccC--chHHHHHHHHHHHHHHH
Q 013969 25 AGNAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDI-GEN-VGLLPGLASNKFP--PWLVLFIGSLACFFGYG 91 (433)
Q Consensus 25 ~g~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~-~~~-~~~~~G~l~Dr~G--~r~~~~ig~~l~~~g~~ 91 (433)
.+..+.+..+.|. +++++|++..+++++.....+ +.. ..+++|++.||++ .|+.+..+.++..++.+
T Consensus 343 ~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~ 414 (633)
T TIGR00805 343 SLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYL 414 (633)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHH
Confidence 3456667777777 577899999999987655444 443 4889999999998 55667666666555543
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=91.86 E-value=2.6 Score=43.59 Aligned_cols=124 Identities=10% Similarity=0.022 Sum_probs=75.0
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccccCchHHHHHHHHHHHH--HHHHHHHHHhcccCch
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNKFPPWLVLFIGSLACFF--GYGVLWLAVSRTVESL 104 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ig~~l~~~--g~~~~~~~~~~~~~~~ 104 (433)
.-+|+-....+.+..|+|...++.+-..+.+... ..+...++.+|+|+.|.-+++...-.. .....++...+ ++
T Consensus 274 VLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~---~~ 350 (432)
T PF06963_consen 274 VLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPG---SP 350 (432)
T ss_pred HhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCC---CC
Confidence 3345555555555569999999987665555544 478888999999999999999874332 22222221111 11
Q ss_pred -hHHHHHH---HHHHHHhchhhhhhhHHHHHhhcccC-CchhHHHHHHhhhhhHH
Q 013969 105 -PYWLLWI---ALCVATNSSAWLGTAVLVTNMRNFPL-SRGTVAGILKGYGGLSA 154 (433)
Q Consensus 105 -~~~~l~~---~~~l~g~g~g~~~~~~~~~~~~~Fp~-~RG~a~gi~~~~~glg~ 154 (433)
+.+..++ ..++.=+|.=..+.+....++++-|+ +||...|.=.+...+-.
T Consensus 351 ~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ 405 (432)
T PF06963_consen 351 FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFE 405 (432)
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHH
Confidence 1122111 11121134434566778889999984 69999998766554433
No 247
>PTZ00207 hypothetical protein; Provisional
Probab=91.58 E-value=2.7 Score=45.28 Aligned_cols=84 Identities=13% Similarity=0.142 Sum_probs=61.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHH
Q 013969 75 PWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSA 154 (433)
Q Consensus 75 ~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~ 154 (433)
||.+.+.-..++.++.+++++... --.+++-.++.|++.|..+.....+..+.|-|+-|+---+......+|+
T Consensus 428 prt~~l~~~~~~~~~~lll~~~~p-------~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs 500 (591)
T PTZ00207 428 PITIALFIPSVCIITMLTLFLTLP-------KAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSA 500 (591)
T ss_pred chhHHHHHHHHHHHHHHHHHHHCC-------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHH
Confidence 555555555557777777665321 1246777788999999888888899999999778988888888888898
Q ss_pred HHHH-HHHHHHh
Q 013969 155 AVFT-EIYNMLL 165 (433)
Q Consensus 155 ~i~~-~l~~~~~ 165 (433)
.+++ .++..++
T Consensus 501 ~~~n~~l~G~~Y 512 (591)
T PTZ00207 501 IFLNRLLYGEWY 512 (591)
T ss_pred HHHHHHHHHHHH
Confidence 8884 4555555
No 248
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.36 E-value=0.42 Score=49.63 Aligned_cols=90 Identities=16% Similarity=-0.032 Sum_probs=69.5
Q ss_pred hhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC-C
Q 013969 60 ENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL-S 138 (433)
Q Consensus 60 ~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~-~ 138 (433)
+....+++.+.|+.|||..+.+|+.....-...+.. +|-+.+++..++.|+|.++.+..--..++++..+ +
T Consensus 64 tv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~--------~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~t 135 (461)
T KOG3098|consen 64 TVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF--------PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRET 135 (461)
T ss_pred HHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh--------cchHHHHHHHHHhhhhHHheecccceehhhcCChhh
Confidence 345888999999999999999999987775554433 2346778888999999998888777888999874 4
Q ss_pred chhHHHHHHhhhhhHHHHH
Q 013969 139 RGTVAGILKGYGGLSAAVF 157 (433)
Q Consensus 139 RG~a~gi~~~~~glg~~i~ 157 (433)
+.+-+++..+....+..+.
T Consensus 136 ie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 136 IERNISIFWAIGQSSLIIG 154 (461)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 8888888777655554444
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=88.28 E-value=4.7 Score=40.92 Aligned_cols=116 Identities=19% Similarity=0.179 Sum_probs=71.1
Q ss_pred HHHhCCCHHHHHHHHHHHHHHh-hccccccccccccC--chHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHH
Q 013969 39 KSVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFP--PWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCV 115 (433)
Q Consensus 39 ~~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G--~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 115 (433)
...+|++..|.+-+.+...+++ .++...++..||.. .+..+..+..++.-.++.++.. .. ...+++...+
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~-----~~--~~~l~~~s~l 361 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA-----RT--PVVLYLGSTL 361 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc-----cc--chhhhHHHHH
Confidence 3578999999998554444555 45778888888877 6666666665555455433321 11 2334443344
Q ss_pred HHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHHH
Q 013969 116 ATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEIY 161 (433)
Q Consensus 116 ~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l~ 161 (433)
-.+..+..-+....++.+.-| ++||.+.|+..+...++=++.|.+.
T Consensus 362 ~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 362 KSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred HHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 444444444444455566668 5699999998887766666655444
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.60 E-value=0.46 Score=45.80 Aligned_cols=79 Identities=16% Similarity=0.130 Sum_probs=55.4
Q ss_pred HHhCCCHHHHHHHHHHHHHHh-hccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHh
Q 013969 40 SVLGFNQHQLTMLGVANDIGE-NVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATN 118 (433)
Q Consensus 40 ~~~g~s~~~~~~i~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 118 (433)
+.+|+-..|++.+...+.-.. .++.++|-|+|+-|||+....=.+...+.++ +.. ++.|-.+.+-++++|+
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi------TKh--SpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI------TKH--SPQYKVLMVGRVLGGI 136 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH------hhc--CCceEEEeehhhhhhH
Confidence 467888889987665553333 5689999999999999976554444444443 222 3456677778999999
Q ss_pred chhhhhhh
Q 013969 119 SSAWLGTA 126 (433)
Q Consensus 119 g~g~~~~~ 126 (433)
.++..+.+
T Consensus 137 aTsLLFSa 144 (454)
T KOG4332|consen 137 ATSLLFSA 144 (454)
T ss_pred HHHHHHHH
Confidence 88877643
No 251
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=85.55 E-value=5.8 Score=39.84 Aligned_cols=116 Identities=11% Similarity=0.090 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccC--chhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC----chhHHHHHHhhh
Q 013969 77 LVLFIGSLACFFGYGVLWLAVSRTVE--SLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS----RGTVAGILKGYG 150 (433)
Q Consensus 77 ~~~~ig~~l~~~g~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~----RG~a~gi~~~~~ 150 (433)
+++.+|+++..+|++++.+....... +...+.+++...+.++|+|..=+.......+.|+++ |-......-.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57889999999999986553322110 112345566566678899888777788899999743 344444444555
Q ss_pred hhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHhhcc
Q 013969 151 GLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVCLVMMYFVR 192 (433)
Q Consensus 151 glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~l~~~~~~r 192 (433)
.+|+.+...+...+-++..+.+-+.++.+..+++++....-|
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 677755432222222233333444444444445554444333
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=85.33 E-value=8.8 Score=39.32 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=72.4
Q ss_pred cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhH
Q 013969 63 GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTV 142 (433)
Q Consensus 63 ~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a 142 (433)
-+.+-++.+|...+.=..+..++..+|+++.++ +++.+.-.+..++.++++|+.-..-+. .++.||+. +
T Consensus 76 Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~-------~~~v~~~l~Gv~las~ssg~GE~tfL~-lt~~y~~~---~ 144 (402)
T PF02487_consen 76 KLIAPFFIHRVPYWIRILICVALSAAGMLLVAF-------SPSVWVRLLGVVLASLSSGLGEVTFLS-LTHFYGKS---S 144 (402)
T ss_pred HHHhHhhhhhccchHHHHHHHHHHHHHHhheee-------ccchhHHHHHHHHHhhhhhhhHHHHHH-HHHhcCcc---c
Confidence 455667888887555555666677777775443 123554444555677777665544444 46677763 3
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHhc--CChhHHHHHHHHHHHHHHHHHHhhcccC
Q 013969 143 AGILKGYGGLSAAVFTEIYNMLLH--NSSSKLLLVLAVGVPAVCLVMMYFVRPC 194 (433)
Q Consensus 143 ~gi~~~~~glg~~i~~~l~~~~~~--~~~~~~l~~~a~~~~~v~l~~~~~~r~~ 194 (433)
++--.+|.|.++.+.+..+..+-. -..+..++....+|++..+...+.++.+
T Consensus 145 l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 145 LSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred cccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 445556777777666665544332 3456677777777766665555555543
No 253
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=84.42 E-value=1.9 Score=44.41 Aligned_cols=122 Identities=13% Similarity=0.089 Sum_probs=66.2
Q ss_pred HhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHH-HhhccccccccccccC-chHHHHHHHHHHHHHHHHHHHHHhccc
Q 013969 24 AAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDI-GENVGLLPGLASNKFP-PWLVLFIGSLACFFGYGVLWLAVSRTV 101 (433)
Q Consensus 24 ~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~-~~~~~~~~G~l~Dr~G-~r~~~~ig~~l~~~g~~~~~~~~~~~~ 101 (433)
..|..|.++.........-|++....|.+.....+ |++.+.+.|.+.||.. -|.++++-.....++.+.+.. .+...
T Consensus 278 ~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~-~t~~~ 356 (480)
T KOG2563|consen 278 GLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLT-CTLFL 356 (480)
T ss_pred hHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH-hhccC
Confidence 35667777776664445567887777886554444 4566999999999975 445555555554444322222 22221
Q ss_pred CchhHHHHHH-HHHHHHhchhhhhhhHHHH-HhhcccCCchhHHHHHHhh
Q 013969 102 ESLPYWLLWI-ALCVATNSSAWLGTAVLVT-NMRNFPLSRGTVAGILKGY 149 (433)
Q Consensus 102 ~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~-~~~~Fp~~RG~a~gi~~~~ 149 (433)
. ..+.++. +..++-.+.+ .+....-. +..-||..-|+-.|++...
T Consensus 357 ~--~~viv~~t~~~~g~~~~~-~~Pig~ElgvE~TyPv~E~tSsGll~~~ 403 (480)
T KOG2563|consen 357 G--DSVIVFTTCGLLGFFGTG-YLPIGFELGVETTYPVAEGTSSGLLNLS 403 (480)
T ss_pred C--ceEehhhhHHHHHHhhcC-CCCcceeeeeeeccccCCcccceeEEee
Confidence 1 1233444 3333323332 23222333 3445897777777775443
No 254
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=82.40 E-value=1.2 Score=47.02 Aligned_cols=57 Identities=18% Similarity=0.113 Sum_probs=44.2
Q ss_pred cHHHHHHHhCCCHHHHHHHHHHHH-HHhhccccccccccccCchHHHHHHHHHHHHHH
Q 013969 34 YSHSLKSVLGFNQHQLTMLGVAND-IGENVGLLPGLASNKFPPWLVLFIGSLACFFGY 90 (433)
Q Consensus 34 ~~~~l~~~~g~s~~~~~~i~~~~~-~~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~ 90 (433)
+.+.+-+++|+++++.+.+....- +..+..|++|.++||+-.||..++|.++..+..
T Consensus 33 ll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a 90 (618)
T KOG3762|consen 33 LLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTA 90 (618)
T ss_pred HHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 334457889999999998655444 444569999999999999998888888766543
No 255
>PF12832 MFS_1_like: MFS_1 like family
Probab=80.81 E-value=1.3 Score=34.04 Aligned_cols=48 Identities=15% Similarity=0.123 Sum_probs=39.1
Q ss_pred eecchhhHHHhhcCCcc--chhHHHHHHhHHHHhhhcccchHHHHHhhhc
Q 013969 370 VLNNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRLVQS 417 (433)
Q Consensus 370 ~i~n~~~i~~s~G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~~~~~~ 417 (433)
+..-+.-..++.|++.. ..+.++.-+...++..++|+++||.++++..
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 33455567778898875 5788899999999999999999999988763
No 256
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=76.75 E-value=37 Score=35.70 Aligned_cols=87 Identities=10% Similarity=0.107 Sum_probs=57.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH--hcc-cCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhh
Q 013969 75 PWLVLFIGSLACFFGYGVLWLAV--SRT-VESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYG 150 (433)
Q Consensus 75 ~r~~~~ig~~l~~~g~~~~~~~~--~~~-~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~ 150 (433)
.+.-..+|..+++++++++.... .+. .+..+.|.+....++.++|-=+.....+..+++.-|++ .+.+++.-....
T Consensus 360 ~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~ 439 (498)
T COG3104 360 TPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTV 439 (498)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 44556788888888888776541 111 11234666666666777777666666788889999976 888888876666
Q ss_pred hhHHHHHHHHH
Q 013969 151 GLSAAVFTEIY 161 (433)
Q Consensus 151 glg~~i~~~l~ 161 (433)
..|..+...+.
T Consensus 440 a~~~~l~g~va 450 (498)
T COG3104 440 AAGQTLGGQVA 450 (498)
T ss_pred HHHHHhhceec
Confidence 66665554443
No 257
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=75.22 E-value=48 Score=33.96 Aligned_cols=171 Identities=12% Similarity=-0.009 Sum_probs=80.2
Q ss_pred HhhhhhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-cccccccccc-----ccCchHHHHH------HHHHHHHHHH
Q 013969 24 AAGNAYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASN-----KFPPWLVLFI------GSLACFFGYG 91 (433)
Q Consensus 24 ~~g~~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~D-----r~G~r~~~~i------g~~l~~~g~~ 91 (433)
..|..+..---.|-+-+.-|.|-++.+.++.+. --+ .-+++..+.| |+||||..++ |.++..+++.
T Consensus 42 lQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay--~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~ 119 (510)
T KOG3574|consen 42 LQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAY--WPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYL 119 (510)
T ss_pred HcCCchhHhhhhHHHhcCCCcchhhhhhhhhhh--hHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhC
Confidence 345544443345556666778877777765532 122 3567778888 9999996544 3333333332
Q ss_pred HHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcc-cCCchhHHHHHHhhhh----hHHHHH-----HHHH
Q 013969 92 VLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNF-PLSRGTVAGILKGYGG----LSAAVF-----TEIY 161 (433)
Q Consensus 92 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~F-p~~RG~a~gi~~~~~g----lg~~i~-----~~l~ 161 (433)
.=-... +....++...+....++.-++.+.-..+.=....... |++-|-|...-..+.. +|..+| +-+.
T Consensus 120 v~~~~g-~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~ 198 (510)
T KOG3574|consen 120 VDRGLG-GNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFC 198 (510)
T ss_pred CCcccc-cCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhh
Confidence 110000 0111222222211111111222222222212222222 3444544443333333 444444 3333
Q ss_pred HHHhcC--------ChhHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 013969 162 NMLLHN--------SSSKLLLVLAVGVPAVCLVMMYFVRPCTPA 197 (433)
Q Consensus 162 ~~~~~~--------~~~~~l~~~a~~~~~v~l~~~~~~r~~~~~ 197 (433)
+.++.. ....|+.|.|.+..+...+..++=|+.++.
T Consensus 199 N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~ 242 (510)
T KOG3574|consen 199 NTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES 242 (510)
T ss_pred hHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh
Confidence 444421 135788888888777766666666665554
No 258
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=74.93 E-value=9 Score=39.61 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=74.4
Q ss_pred CCHHHHHHHHHHHHHHhhc-cccccccccccCchHHHHHHHHHHHHHHHHHHHHHhc-----ccCchhHHHHHHHHHHHH
Q 013969 44 FNQHQLTMLGVANDIGENV-GLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSR-----TVESLPYWLLWIALCVAT 117 (433)
Q Consensus 44 ~s~~~~~~i~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~-----~~~~~~~~~l~~~~~l~g 117 (433)
+|+...+.+...+.++... ..+.....-++.-|++.....++..+..+.-...... .+++ -|..+.-.++..
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d--~~f~lgd~~l~~ 329 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPD--QWFALGDTILEE 329 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCC--eEEEEEhHHHHH
Confidence 8888787776666666543 4444455556677888877777665544321111111 0111 111112334444
Q ss_pred hchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHHHh
Q 013969 118 NSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNMLL 165 (433)
Q Consensus 118 ~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~ 165 (433)
+...+.+.+....++|.-|+. -|+..++..+..++|..+...+...+.
T Consensus 330 ~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~ 378 (433)
T PF03092_consen 330 VIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLM 378 (433)
T ss_pred HHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566778888999999965 999999999999999887766666544
No 259
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=74.65 E-value=21 Score=36.65 Aligned_cols=110 Identities=9% Similarity=0.017 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHhhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhh
Q 013969 46 QHQLTMLGVANDIGENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGT 125 (433)
Q Consensus 46 ~~~~~~i~~~~~~~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~ 125 (433)
+.+--+......+|.+.+=-...+. | .|++.+...+-..--.+.+....-... ++.|.+++..+.-|+..|..|.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~-r--ir~lwils~LQ~~nl~~~~l~s~~~fi--psi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF-R--IRRLWILSLLQVINLVFLLLQSWYRFI--PSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee-e--hhhHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhhHHHH
Confidence 4455566666666654311111222 2 366666655533332222211122222 3467776666677777788888
Q ss_pred hHHHHHhhccc-CCchhHHHHHHhhhhhHHHHHHHH
Q 013969 126 AVLVTNMRNFP-LSRGTVAGILKGYGGLSAAVFTEI 160 (433)
Q Consensus 126 ~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i~~~l 160 (433)
-....+.+..| ++|-.++|.+..+-++|-.+.+.+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll 390 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLL 390 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 88888888887 679999999988887777665443
No 260
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=63.82 E-value=9.6 Score=33.47 Aligned_cols=84 Identities=15% Similarity=0.199 Sum_probs=42.4
Q ss_pred ccccccCchHHHHHHHHH-HHHH-HHHHHHHHhcccCchhHHHHHH-HHHHHHhch-hhhhhhHHHHHhhcccCCchhHH
Q 013969 68 LASNKFPPWLVLFIGSLA-CFFG-YGVLWLAVSRTVESLPYWLLWI-ALCVATNSS-AWLGTAVLVTNMRNFPLSRGTVA 143 (433)
Q Consensus 68 ~l~Dr~G~r~~~~ig~~l-~~~g-~~~~~~~~~~~~~~~~~~~l~~-~~~l~g~g~-g~~~~~~~~~~~~~Fp~~RG~a~ 143 (433)
...||.-+|.....|.=. .+++ +..++.......-..+.|..++ -.++.|+|. |+.|. .+.+.|=|++.|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisYG---ilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISYG---ILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhhh---hcccccCCCCCCCcc
Confidence 456777666666555432 2222 2223332322211112343333 344455443 55564 445677778899998
Q ss_pred HHHHhhhhhHH
Q 013969 144 GILKGYGGLSA 154 (433)
Q Consensus 144 gi~~~~~glg~ 154 (433)
|+-..-.+++-
T Consensus 133 G~~e~~~N~~r 143 (153)
T PF11947_consen 133 GWEEFKRNWGR 143 (153)
T ss_pred cHHHHHHhHHH
Confidence 88655544443
No 261
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=54.64 E-value=60 Score=35.93 Aligned_cols=63 Identities=14% Similarity=0.149 Sum_probs=42.1
Q ss_pred hhhhhhccHHH-HHHHhCCCHHHHHHHHHHHHHHh-hc-cccccccccccC--chHHHHHHHHHHHHH
Q 013969 27 NAYNFPLYSHS-LKSVLGFNQHQLTMLGVANDIGE-NV-GLLPGLASNKFP--PWLVLFIGSLACFFG 89 (433)
Q Consensus 27 ~~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~~~-~~-~~~~G~l~Dr~G--~r~~~~ig~~l~~~g 89 (433)
.+-.+..|.|. ++++||.+++.++.+.-...+.. .+ .+++|++..|+- +|..+....+...+.
T Consensus 407 ~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 407 AITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS 474 (735)
T ss_pred HHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence 34456678877 68899999999998654444544 44 788999999864 444444444433333
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=52.65 E-value=2.9e+02 Score=28.69 Aligned_cols=73 Identities=10% Similarity=-0.043 Sum_probs=48.1
Q ss_pred cHHHHhhhhhHHHHHHHHHhhcccceeeecchhhHHHhhcCCcc--chhHHHHHHhHHHHhhhcccchHHHHHhhh
Q 013969 343 KFTEAVVKADFWLLFLVYFAGVGSGVTVLNNLAQIGIAQGVHDT--TILLSLFSFCNFVGRLGGGVVSEHFVRLVQ 416 (433)
Q Consensus 343 t~~~~l~t~~Fwll~~~~~~~~g~g~~~i~n~~~i~~s~G~~~~--~~~vsl~si~n~~GRl~~G~lsD~~~~~~~ 416 (433)
.+++..+.+-|..-+. +.+.-..-+..-+.+...+.++|+++. ..+=++-+++...|=++..++.+|++..+.
T Consensus 251 ~w~~Y~~q~vflas~a-lalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~ 325 (432)
T PF06963_consen 251 GWRTYFRQPVFLASFA-LALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA 325 (432)
T ss_pred cHHHHHhCHHHHHHHH-HHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 3556777776664332 222222244456677788888899886 457777778888888888888888775543
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=52.54 E-value=1.3e+02 Score=31.32 Aligned_cols=49 Identities=14% Similarity=0.188 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCCchhHHHHHHhhhhhHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLSRGTVAGILKGYGGLSAAVFT 158 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~RG~a~gi~~~~~glg~~i~~ 158 (433)
++..++..++.|++.+..... .-..+..||++ -++....|.|+++.+.+
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s-~~gla~~fp~~---~~~a~~~G~g~aGv~~s 154 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGS-LFGLAGVFPST---YSSAVMSGQGLAGVLTS 154 (437)
T ss_pred HHHHHHHHHHHHhhhhhhccc-chhhcccCCHH---HHHHHHhcchhHHHHHH
Confidence 455555666777777766543 34466788954 23334456667765543
No 264
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=51.13 E-value=1.5e+02 Score=31.91 Aligned_cols=104 Identities=17% Similarity=0.102 Sum_probs=62.1
Q ss_pred ccHHHHHHHhCCCHHHHHHH-HHHHHHHhhccccccccccc-cCchHHHHHHHHHHHHHHHHHHHHHhcc----------
Q 013969 33 LYSHSLKSVLGFNQHQLTML-GVANDIGENVGLLPGLASNK-FPPWLVLFIGSLACFFGYGVLWLAVSRT---------- 100 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~~~~i-~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~ig~~l~~~g~~~~~~~~~~~---------- 100 (433)
-....+.++++.+..++.-. .............+++++|- +|+-+++.++.++..+|.+++.+...-.
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~ 138 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK 138 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence 34445688888887666653 33332222346888999998 5888899999998888866654422111
Q ss_pred -----cCchhHHH---HHHHHHHHHhchhhhhhhHHHHHhhccc
Q 013969 101 -----VESLPYWL---LWIALCVATNSSAWLGTAVLVTNMRNFP 136 (433)
Q Consensus 101 -----~~~~~~~~---l~~~~~l~g~g~g~~~~~~~~~~~~~Fp 136 (433)
...++-++ ++....+..+|.|..-......-...|+
T Consensus 139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd 182 (571)
T KOG1237|consen 139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFD 182 (571)
T ss_pred CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccC
Confidence 01112222 2233334555676655555666778887
No 265
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=49.08 E-value=17 Score=38.26 Aligned_cols=185 Identities=17% Similarity=0.251 Sum_probs=94.6
Q ss_pred hHhHHHHHHHHHHh-hhhhh-hhccHHHHHHHhCCCHHHHHHHHHHH-HH-Hh---hccccccccc-cccCchHHHHHHH
Q 013969 12 WVGLGAAVWVQIAA-GNAYN-FPLYSHSLKSVLGFNQHQLTMLGVAN-DI-GE---NVGLLPGLAS-NKFPPWLVLFIGS 83 (433)
Q Consensus 12 w~~l~~~~l~~~~~-g~~y~-~s~~~~~l~~~~g~s~~~~~~i~~~~-~~-~~---~~~~~~G~l~-Dr~G~r~~~~ig~ 83 (433)
|...+.++..-... ..... -+.+.+.....++|+.++.-...... .+ +. .+....+... -++..|+.+..+.
T Consensus 261 ~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~ 340 (488)
T KOG2325|consen 261 WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGF 340 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehH
Confidence 55554554443332 22333 23444446788999999875532211 11 11 1222223322 3445677777776
Q ss_pred HHHHHHHHHHHHH---Hhccc---------------------CchhHHHHHH-HHHHHHhchhhhhhhHHHHHhhcc-cC
Q 013969 84 LACFFGYGVLWLA---VSRTV---------------------ESLPYWLLWI-ALCVATNSSAWLGTAVLVTNMRNF-PL 137 (433)
Q Consensus 84 ~l~~~g~~~~~~~---~~~~~---------------------~~~~~~~l~~-~~~l~g~g~g~~~~~~~~~~~~~F-p~ 137 (433)
+.....+..+-.. ...+. +..+.+.+++ +.+..|.+..++..+..+.-+|.. |+
T Consensus 341 l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~ 420 (488)
T KOG2325|consen 341 LIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPR 420 (488)
T ss_pred HHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCc
Confidence 6555554432110 00000 0011222222 455567777777777788889998 78
Q ss_pred CchhHHHHHHhhhhhHHHHHHHHHHHHhcC-ChhHH-HHHHHHHHHHHHHHHHhhcccCCC
Q 013969 138 SRGTVAGILKGYGGLSAAVFTEIYNMLLHN-SSSKL-LLVLAVGVPAVCLVMMYFVRPCTP 196 (433)
Q Consensus 138 ~RG~a~gi~~~~~glg~~i~~~l~~~~~~~-~~~~~-l~~~a~~~~~v~l~~~~~~r~~~~ 196 (433)
++|++.|+.......+-.+.+.+....+.. +.++. .+..+.+.+.+.+....+.|..|.
T Consensus 421 ~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~~~r~~~~ 481 (488)
T KOG2325|consen 421 DQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVFLKRLVPL 481 (488)
T ss_pred cccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 899999998777666665555444445542 33333 333333333444444455554443
No 266
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=46.58 E-value=78 Score=33.14 Aligned_cols=45 Identities=20% Similarity=0.342 Sum_probs=25.5
Q ss_pred hhhhhccHHHHHHHhCCCHHHHHHHHHHHHHHhh-ccccccccccc
Q 013969 28 AYNFPLYSHSLKSVLGFNQHQLTMLGVANDIGEN-VGLLPGLASNK 72 (433)
Q Consensus 28 ~y~~s~~~~~l~~~~g~s~~~~~~i~~~~~~~~~-~~~~~G~l~Dr 72 (433)
.|....+.+...+--|.+..+...+......+.. ...++|.+.||
T Consensus 264 sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~ 309 (493)
T KOG1330|consen 264 SWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK 309 (493)
T ss_pred chhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHH
Confidence 3444455444444455554444445554444444 47888999999
No 267
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=44.03 E-value=21 Score=37.17 Aligned_cols=61 Identities=20% Similarity=0.238 Sum_probs=41.3
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHH-Hhhccccccccccc----cCchHHHHH-HHHHHHHHHHHH
Q 013969 33 LYSHSLKSVLGFNQHQLTMLGVANDI-GENVGLLPGLASNK----FPPWLVLFI-GSLACFFGYGVL 93 (433)
Q Consensus 33 ~~~~~l~~~~g~s~~~~~~i~~~~~~-~~~~~~~~G~l~Dr----~G~r~~~~i-g~~l~~~g~~~~ 93 (433)
-|.+|+.++.|.+..-.+.+-..+-+ |..++|+.|..+|| |||||..+. +.++..++.+++
T Consensus 53 sy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Li 119 (498)
T KOG0637|consen 53 SYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLI 119 (498)
T ss_pred ccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhh
Confidence 36677778889887766664444433 44579999999997 898886554 444555555543
No 268
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=41.23 E-value=58 Score=30.65 Aligned_cols=87 Identities=11% Similarity=0.024 Sum_probs=51.8
Q ss_pred ccccccccccCchH--------HHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcc
Q 013969 64 LLPGLASNKFPPWL--------VLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNF 135 (433)
Q Consensus 64 ~~~G~l~Dr~G~r~--------~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~F 135 (433)
+=.+.+.||||..- +.++|.++..+-+-+++-...+.. ...=+.+..-.|+|++.+.+++...+...|
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~----~fhP~ALAMasGvGSgSMMaAa~~aL~~~~ 200 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLG----IFHPYALAMASGVGSGSMMAAASGALAAAY 200 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhcc----CCCHHHHHHHcCCcHHHHHHHHHHHHHHHC
Confidence 45588999998643 445555555543333332122110 011122333467888888888999999999
Q ss_pred cCCchhHHHHHHhhhhhHH
Q 013969 136 PLSRGTVAGILKGYGGLSA 154 (433)
Q Consensus 136 p~~RG~a~gi~~~~~glg~ 154 (433)
|+..-...++..+.+=+.+
T Consensus 201 P~~a~~i~A~AaaSNllt~ 219 (241)
T PF11299_consen 201 PEMADQILAFAAASNLLTS 219 (241)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 9887777777555543443
No 269
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=39.76 E-value=1.4e+02 Score=23.73 Aligned_cols=17 Identities=12% Similarity=-0.056 Sum_probs=7.6
Q ss_pred cccccccccccCchHHH
Q 013969 63 GLLPGLASNKFPPWLVL 79 (433)
Q Consensus 63 ~~~~G~l~Dr~G~r~~~ 79 (433)
..+.|.+.|+.|.+...
T Consensus 104 ~~~~~~~~~~~~~~~~~ 120 (141)
T TIGR00880 104 PPLGGVLAQFLGWRAPF 120 (141)
T ss_pred HHhHHHHhcccchHHHH
Confidence 34444444544444433
No 270
>KOG1629 consensus Bax-mediated apoptosis inhibitor TEGT/BI-1 [Defense mechanisms]
Probab=31.75 E-value=1.7e+02 Score=26.90 Aligned_cols=73 Identities=14% Similarity=0.004 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhcccCC-chhHHHHHHhhhhhHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFPLS-RGTVAGILKGYGGLSAAVFTEIYNMLLHNSSSKLLLVLAVGVPAVC 184 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~~-RG~a~gi~~~~~glg~~i~~~l~~~~~~~~~~~~l~~~a~~~~~v~ 184 (433)
+.+++++.++.|.+.|.....+...-....+.. -|+|+.+ ..+.+++++. ..+.|++..|.+...++
T Consensus 80 l~lL~~fa~l~GasvGP~i~~~ididpsIliTAf~GTav~F--~cfSasAmlA----------rrreYLylGg~L~s~~s 147 (235)
T KOG1629|consen 80 LGLLFLFAFLTGASVGPLIKFCIDIDPSILITAFVGTAVIF--VCFSASAMLA----------RRREYLYLGGLLSSGLS 147 (235)
T ss_pred HHHHHHHHHHcCCcccchhhheeccChHHHHHHHHhhHHHH--HHHHHHHHHH----------hhhhhhhhhHHHHHHHH
Confidence 556666777777665533221111111222211 3444333 2333333322 35567777777776666
Q ss_pred HHHHhh
Q 013969 185 LVMMYF 190 (433)
Q Consensus 185 l~~~~~ 190 (433)
++.+.-
T Consensus 148 ~l~wl~ 153 (235)
T KOG1629|consen 148 LLLWLS 153 (235)
T ss_pred HHHHHH
Confidence 655543
No 271
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=29.15 E-value=1.4e+02 Score=31.60 Aligned_cols=84 Identities=17% Similarity=0.354 Sum_probs=49.6
Q ss_pred HHhhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHHHHHhhcccC
Q 013969 58 IGENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVLVTNMRNFPL 137 (433)
Q Consensus 58 ~~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp~ 137 (433)
++....+.+|++-.++.+.--+.++.+-..-+-+++....+ .+.|..|+..++.+....+..+.+..-++++-.+
T Consensus 310 lga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t-----~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~ 384 (511)
T TIGR00806 310 LGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQS-----HDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSK 384 (511)
T ss_pred HHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcc-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34445677777766663333333433333333333333222 3578888877777766666666666677888875
Q ss_pred C-chhHHHHH
Q 013969 138 S-RGTVAGIL 146 (433)
Q Consensus 138 ~-RG~a~gi~ 146 (433)
+ -|+..|+-
T Consensus 385 ~~~aLvFGiN 394 (511)
T TIGR00806 385 ELCALVFGIN 394 (511)
T ss_pred cceEEEEecH
Confidence 5 58888873
No 272
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=28.85 E-value=91 Score=25.33 Aligned_cols=27 Identities=15% Similarity=0.215 Sum_probs=14.7
Q ss_pred hccccccccccc-cCchHHHHHHHHHHH
Q 013969 61 NVGLLPGLASNK-FPPWLVLFIGSLACF 87 (433)
Q Consensus 61 ~~~~~~G~l~Dr-~G~r~~~~ig~~l~~ 87 (433)
+.+.+.|...|+ ||..+...+..++.+
T Consensus 57 l~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 57 LLGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 346777887777 554444444334333
No 273
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=25.73 E-value=4.8e+02 Score=26.92 Aligned_cols=91 Identities=16% Similarity=0.249 Sum_probs=51.6
Q ss_pred HHHHHHHHH-HhhccccccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhhhhhhHH
Q 013969 50 TMLGVANDI-GENVGLLPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAWLGTAVL 128 (433)
Q Consensus 50 ~~i~~~~~~-~~~~~~~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~~~~~~~ 128 (433)
|.+-....+ +......+|.+-.++.+..-+.++.+-...+..++..... .+.|..++..++.+...-+..+.+.
T Consensus 288 G~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t-----~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFT-----GNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344333333 3345777888877776666555555544434333333222 2578877766666544445555555
Q ss_pred HHHhhcccC-CchhHHHH
Q 013969 129 VTNMRNFPL-SRGTVAGI 145 (433)
Q Consensus 129 ~~~~~~Fp~-~RG~a~gi 145 (433)
.-++++..+ +-|++.|+
T Consensus 363 ~qIA~~l~~e~yaLVFGi 380 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGI 380 (412)
T ss_pred HHHHHhccccceeeeeee
Confidence 557777774 46777766
No 274
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=25.48 E-value=4.5e+02 Score=28.06 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccCC
Q 013969 169 SSKLLLVLAVGVPAVCLVMMYFVRPCT 195 (433)
Q Consensus 169 ~~~~l~~~a~~~~~v~l~~~~~~r~~~ 195 (433)
...|+.+.|++.+++.....++-|+.|
T Consensus 199 l~~yl~fwg~~~l~~T~~v~~~k~E~~ 225 (544)
T PF13000_consen 199 LSGYLKFWGWVFLIVTILVAFFKKEKP 225 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHheEeeccc
Confidence 358999999999998887777777654
No 275
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=24.14 E-value=2.8e+02 Score=28.74 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhchhhhhhhHHHHHhhccc-CCchhHHHHHHhhhhhHHHH
Q 013969 106 YWLLWIALCVATNSSAWLGTAVLVTNMRNFP-LSRGTVAGILKGYGGLSAAV 156 (433)
Q Consensus 106 ~~~l~~~~~l~g~g~g~~~~~~~~~~~~~Fp-~~RG~a~gi~~~~~glg~~i 156 (433)
-|..++..++.|+.+|...+.++....+..+ ++|-.|-.+...+..+|-++
T Consensus 372 d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~ 423 (437)
T TIGR00939 372 DAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLAL 423 (437)
T ss_pred cHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556777888888777767776777775 45777766655554444433
No 276
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=22.82 E-value=2.5e+02 Score=23.05 Aligned_cols=52 Identities=12% Similarity=-0.136 Sum_probs=33.9
Q ss_pred cccccccccCchHHHHHHHHHHHHHHHHHHHHHhcccCchhHHHHHHHHHHHHhchhh
Q 013969 65 LPGLASNKFPPWLVLFIGSLACFFGYGVLWLAVSRTVESLPYWLLWIALCVATNSSAW 122 (433)
Q Consensus 65 ~~G~l~Dr~G~r~~~~ig~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~g~ 122 (433)
..=+.+|.|.++...+...+...+++.+++.+..+ ...-..|....|+|...
T Consensus 19 ~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~------ipvgvAYAiW~GiG~v~ 70 (106)
T COG2076 19 TLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKT------IPLGVAYAIWTGIGIVG 70 (106)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhh------CchHHHHHHHHHHHHHH
Confidence 33456787777777777777888888877775543 12233467778777643
No 277
>PRK11715 inner membrane protein; Provisional
Probab=21.86 E-value=8.7e+02 Score=25.28 Aligned_cols=9 Identities=22% Similarity=0.320 Sum_probs=5.3
Q ss_pred CCchhHHHH
Q 013969 137 LSRGTVAGI 145 (433)
Q Consensus 137 ~~RG~a~gi 145 (433)
.|||..++.
T Consensus 383 ~k~g~~~~~ 391 (436)
T PRK11715 383 WKRGLLFAA 391 (436)
T ss_pred chHHHHHHH
Confidence 456766555
No 278
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=21.20 E-value=32 Score=36.77 Aligned_cols=49 Identities=27% Similarity=0.342 Sum_probs=0.0
Q ss_pred hhhhhccHHH-HHHHhCCCHHHHHHHHHHHHH-Hhhc-cccccccccccCch
Q 013969 28 AYNFPLYSHS-LKSVLGFNQHQLTMLGVANDI-GENV-GLLPGLASNKFPPW 76 (433)
Q Consensus 28 ~y~~s~~~~~-l~~~~g~s~~~~~~i~~~~~~-~~~~-~~~~G~l~Dr~G~r 76 (433)
.-.+..|.|. ++.+|+.++++++++.-...+ +..+ .+++|++..|+..+
T Consensus 321 ~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 321 VSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp ----------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 4456777877 588999999999985443334 4444 78999999998654
Done!