Query 013972
Match_columns 433
No_of_seqs 211 out of 610
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 03:10:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozb_B U4/U6 small nuclear rib 100.0 1.3E-88 4.3E-93 661.8 20.9 254 50-303 5-260 (260)
2 3icx_A PRE mRNA splicing prote 100.0 1.3E-85 4.6E-90 637.4 18.9 244 61-307 3-247 (255)
3 3pla_A NOP5, PRE mRNA splicing 100.0 1.2E-81 4E-86 638.6 17.8 269 30-307 111-380 (388)
4 2nnw_A NOP5/NOP56 related prot 100.0 5.3E-79 1.8E-83 619.1 18.0 264 29-302 111-376 (376)
5 1nt2_B Conserved hypothetical 100.0 2.8E-62 9.6E-67 474.0 9.1 207 28-303 46-257 (258)
6 3gqu_A NOP5P protein; RNA bind 100.0 1.8E-50 6E-55 368.2 3.9 133 169-304 17-149 (169)
7 3id6_A NOP5, PRE mRNA splicing 100.0 4.3E-36 1.5E-40 293.3 14.4 131 57-187 132-263 (268)
8 4fbj_A CIF, hypothetical prote 75.0 1.4 4.6E-05 41.9 2.4 56 202-258 99-165 (261)
9 3efy_A CIF (cell cycle inhibit 67.7 1.8 6.3E-05 39.3 1.5 50 209-258 44-98 (195)
10 2cly_C ATP synthase coupling f 67.7 7.6 0.00026 31.1 4.9 48 34-97 11-62 (77)
11 4f8c_A Cycle inhibiting factor 60.1 3.1 0.00011 39.7 1.5 50 209-258 138-192 (275)
12 3eir_A Putative ATP/GTP bindin 54.1 4.2 0.00014 38.7 1.3 50 209-258 142-196 (281)
13 1kea_A Possible G-T mismatches 30.4 2.2E+02 0.0075 26.0 9.0 35 75-113 5-42 (221)
14 2a1j_A DNA repair endonuclease 21.3 45 0.0015 24.8 2.0 34 193-226 12-46 (63)
No 1
>2ozb_B U4/U6 small nuclear ribonucleoprotein PRP31; RNA-protein complex, ribonucleoprotein particle (RNP), PRE-M splicing, U4/U6 DI-snRNA, U4/U6 DI-snRNP; 2.60A {Homo sapiens} SCOP: a.183.1.1 PDB: 3siu_B 3siv_B
Probab=100.00 E-value=1.3e-88 Score=661.80 Aligned_cols=254 Identities=54% Similarity=0.861 Sum_probs=233.6
Q ss_pred CCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHHHHHHHhcCCCCCC--cccccc
Q 013972 50 SNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLT--LVDLEG 127 (433)
Q Consensus 50 ~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~p~~Y~~~V~~ign~~dl~--~~~L~~ 127 (433)
+...++++++|||++|+|||+|+++||+|||.+|+||||||+||||||++||+||++|+++|+.|||+.+++ ..+|.+
T Consensus 5 ~~~~~~~e~~~eY~~Ivqa~~lld~idkein~~~~rlre~Y~~~FPEL~~lv~~~~~Y~~~V~~ig~~~~~~~~~~~L~~ 84 (260)
T 2ozb_B 5 SEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQ 84 (260)
T ss_dssp -------CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHCCSHHHHHHHHHHHTTCGGGCTTCTTGGG
T ss_pred ccccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCccHHHHhcCHHHHHHHHHHhCCchhhccchHHHHH
Confidence 345788999999999999999999999999999999999999999999999999999999999999998876 456999
Q ss_pred cCChHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHhhchHHHHHHHHhhCC
Q 013972 128 LLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGG 207 (433)
Q Consensus 128 iL~~~~imvis~~Asts~G~~Ls~~dl~~i~~ac~~~~~L~~~r~~i~~yvesrM~~iAPNLsaLvG~~vaAkLi~~AGG 207 (433)
+|+++++|+|+++|++|+|.+||++|+.+|..+|+++++|+++|++|.+||++||..||||||+|||+.||||||++|||
T Consensus 85 iL~~~~~~~i~~aA~~S~G~~ls~~dl~~i~~~~~~v~~L~~~r~~l~~yl~~rM~~iAPNLtaLvG~~vaArLI~~AGs 164 (260)
T 2ozb_B 85 ILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGG 164 (260)
T ss_dssp TSCHHHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHTS
T ss_pred HcCHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHhCcHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhcCCCchhhhhhhhhcccccccccCCCCCccceEeeCccccCCCccchhhHHHHHhhhHHHHhhcccCCCCCCCcch
Q 013972 208 LSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAG 287 (433)
Q Consensus 208 L~~LAkmPAcnIq~LGaeK~~~~glst~~~~p~~G~Iy~s~lVq~~P~~~r~KaaR~lAaK~aLAARvD~~~~~~~g~~G 287 (433)
|++||||||||||+|||+|++|+||++++.+||||||||||+||++||++||||+|+||+||+||||||+|+++++|.+|
T Consensus 165 L~~Lak~PastiqiLGaeKalf~~l~t~~~~pk~G~Iy~~~~V~~~p~~~rgk~~R~lA~K~alAaRiD~~~~~~~~~~G 244 (260)
T 2ozb_B 165 LTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESTEGKVG 244 (260)
T ss_dssp HHHHHTSCHHHHTTTTCC----------CCCTTCCTTTTSHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHTTCSTTSHHH
T ss_pred HHHHhhCCcHHHHHhcccHHHHHhhccCCCCCCeeeEeCCHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC
Q 013972 288 RSFREEIHKKIEKWQE 303 (433)
Q Consensus 288 ~~lreeI~~ki~Kl~e 303 (433)
.+||++|++||+||+|
T Consensus 245 ~~lr~~ie~rl~~~~e 260 (260)
T 2ozb_B 245 YELKDEIERKFDKWQE 260 (260)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999987
No 2
>3icx_A PRE mRNA splicing protein; C/D guide RNA, 2'-O-methylation, coiled-coil, RNA binding PR; 3.10A {Sulfolobus solfataricus}
Probab=100.00 E-value=1.3e-85 Score=637.38 Aligned_cols=244 Identities=30% Similarity=0.441 Sum_probs=217.9
Q ss_pred chhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHHHHHHHhcCCCCCCccccccc-CChHHHHHHHH
Q 013972 61 EYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGL-LPSAIIMVVSV 139 (433)
Q Consensus 61 ey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~p~~Y~~~V~~ign~~dl~~~~L~~i-L~~~~imvis~ 139 (433)
-+++|||||+++++||+|||.+|+||||||+||||||++||+||++|+++|+.|||+.+++..+|+++ +|++++++|++
T Consensus 3 ~D~~Iiqai~lld~iDkein~~~~rvrewY~~~FPEL~~iv~d~~~Yak~V~~ig~~~~~~~~~l~~l~l~~~~~~~i~~ 82 (255)
T 3icx_A 3 RDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRINRILD 82 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHCCCHHHHHHHHHHTCSGGGCCHHHHHTTTCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcCcchHhhcCCHHHHHHHHHHHcCCCCCChhhHHHccCCHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred HhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHhhchHHHHHHHHhhCCcchhcCCCchhh
Q 013972 140 TASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNV 219 (433)
Q Consensus 140 ~Asts~G~~Ls~~dl~~i~~ac~~~~~L~~~r~~i~~yvesrM~~iAPNLsaLvG~~vaAkLi~~AGGL~~LAkmPAcnI 219 (433)
+|++|+|.+||++|+.+|.++|+++++|+++|++|.+||++||..||||||+|||+.||||||++||||++|||||||||
T Consensus 83 aa~~S~G~~ls~~dl~~i~~~~~~v~~L~~~r~~l~~yl~srM~~iAPNLsaLvG~~vaArLIs~AGgL~~LAk~PAstI 162 (255)
T 3icx_A 83 AAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPNVTALVGPALGARLLSIAGSLDELAKMPASTI 162 (255)
T ss_dssp HHHTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCHHHHHHHHHHHSSHHHHTTSCHHHH
T ss_pred HHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHhccHHHHHHHHHcCCHHHHhhCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCCccceEeeCccccCCCccchhhHHHHHhhhHHHHhhcccCCCCCCCcchHHHHHHHHHHHH
Q 013972 220 QLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIE 299 (433)
Q Consensus 220 q~LGaeK~~~~glst~~~~p~~G~Iy~s~lVq~~P~~~r~KaaR~lAaK~aLAARvD~~~~~~~g~~G~~lreeI~~ki~ 299 (433)
|+|||||++|++|++++.+||||||||||+||++||++||||+|+||+||+||||||+|++ ..+|.+||++|++||+
T Consensus 163 qiLGAeKalfr~lkt~~~tPk~G~Iy~s~~V~~ap~~~rgkiaR~LAaK~aLAARiD~~~g---~~~G~~lre~ie~ri~ 239 (255)
T 3icx_A 163 QVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAKLAIAARVDAFSG---RFIGDQLNEQLKKRID 239 (255)
T ss_dssp TTCC-------------------GGGGSHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHTTC---CCCHHHHHHHHHHHHH
T ss_pred HHhhhhhHHHHHhccCCCCCCeeEEecCHhhhcCCHHHHHHHHHHHHHHHHHHHhhcccCC---cccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999973 3469999999999999
Q ss_pred HhcCCCCC
Q 013972 300 KWQEPPPA 307 (433)
Q Consensus 300 Kl~epP~~ 307 (433)
+|+||...
T Consensus 240 kl~e~~~~ 247 (255)
T 3icx_A 240 EIKEKFAQ 247 (255)
T ss_dssp HHHTTC--
T ss_pred HHhCcccc
Confidence 99999654
No 3
>3pla_A NOP5, PRE mRNA splicing protein; RNA-binding, SAM, box C/D RNA; HET: SAH; 3.15A {Sulfolobus solfataricus} PDB: 3id5_A*
Probab=100.00 E-value=1.2e-81 Score=638.63 Aligned_cols=269 Identities=27% Similarity=0.415 Sum_probs=248.1
Q ss_pred chHHHHHHHHHHHHhcCCCCCCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHHH
Q 013972 30 QRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYAR 109 (433)
Q Consensus 30 ~~~~~~l~~i~~~~~~~~~~~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~p~~Y~~ 109 (433)
..|...+..+.+...+.. -....+..+++|||||+++++||+|||.+|+||||||+||||||++||+||++|++
T Consensus 111 ~d~~~~~~~l~~~~sr~k------vk~~~~k~D~~Ivqai~lld~iDkein~~~~rvrewY~~hFPEL~~iV~d~~~Yak 184 (388)
T 3pla_A 111 EDYYNFLHELSLEYTRRK------LRSAAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYAT 184 (388)
T ss_dssp HHHHHHHHHHHHHHHHHH------HHHHHTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCGGGTTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------HhhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhcCCHHHHHH
Confidence 345566666655444311 11334457899999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCCccccccc-CChHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCc
Q 013972 110 VVKKIGNEMDLTLVDLEGL-LPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAPN 188 (433)
Q Consensus 110 ~V~~ign~~dl~~~~L~~i-L~~~~imvis~~Asts~G~~Ls~~dl~~i~~ac~~~~~L~~~r~~i~~yvesrM~~iAPN 188 (433)
+|+.|||+.+++..+|+++ +|.+++++|+++|++|+|.+||++|+.+|.++|+++++|+++|++|.+||++||..||||
T Consensus 185 ~V~~ignr~~~~~~~l~~l~l~~~~~~~I~~aA~~SmG~~ls~~dl~~I~~~~~~v~~L~e~R~~L~~Yl~srM~~iAPN 264 (388)
T 3pla_A 185 IVSRFGDRGFLTIDSLKELGFNEQRINRILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAPN 264 (388)
T ss_dssp HHHHTCSGGGCCHHHHHTTTCCHHHHHHHHHHHHTCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHhcCcccCChhhHhhcCCCHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 9999999999999999999 899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhchHHHHHHHHhhCCcchhcCCCchhhhhhhhhcccccccccCCCCCccceEeeCccccCCCccchhhHHHHHhhh
Q 013972 189 LSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAAK 268 (433)
Q Consensus 189 LsaLvG~~vaAkLi~~AGGL~~LAkmPAcnIq~LGaeK~~~~glst~~~~p~~G~Iy~s~lVq~~P~~~r~KaaR~lAaK 268 (433)
||+|||+.||||||++||||++||||||||||+|||||++|++|+|++.+||||||||||+|+++|||+||||+|+||+|
T Consensus 265 LsaLvG~~vaArLIs~AGgL~~LAK~PAstIQiLGAeKalfr~Lkt~~~tPk~G~Iy~s~~V~~ap~~~rgKiaR~LAaK 344 (388)
T 3pla_A 265 VTALVGPALGARLLSIAGSLDELAKMPASTIQVLGAEKALFRALRSGGRPPKHGIIFQYPAIHTSPRWQRGKIARALAAK 344 (388)
T ss_dssp HHHHHHHHHHHHHHHHHSSHHHHHTSCHHHHTTSSCHHHHHHHHHHTCCCCSCSGGGGSHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHcCCHHHHhhCChHHHHHhhhhhHHHHHhccCCCCCCeeEEecCHhhhhCCHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCcchHHHHHHHHHHHHHhcCCCCC
Q 013972 269 STLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQEPPPA 307 (433)
Q Consensus 269 ~aLAARvD~~~~~~~g~~G~~lreeI~~ki~Kl~epP~~ 307 (433)
|+||||||+|++ ..+|.+||++|++||++|+||...
T Consensus 345 ~aLAARiD~~~g---~~~G~~lreeie~ri~kl~e~~~~ 380 (388)
T 3pla_A 345 LAIAARVDAFSG---RFIGDQLNEQLKKRIDEIKEKFAQ 380 (388)
T ss_dssp HHHHHHHHHTCC---CCCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHhhcccCC---cccCHHHHHHHHHHHHHHhCcccc
Confidence 999999999973 357999999999999999999654
No 4
>2nnw_A NOP5/NOP56 related protein; box C/D; 2.70A {Pyrococcus furiosus} PDB: 3nvi_A 3nmu_A 3nvk_A* 3nvm_A
Probab=100.00 E-value=5.3e-79 Score=619.08 Aligned_cols=264 Identities=26% Similarity=0.380 Sum_probs=235.1
Q ss_pred cchHHHHHHHHHHHHhcCCCCCCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHH
Q 013972 29 SQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYA 108 (433)
Q Consensus 29 s~~~~~~l~~i~~~~~~~~~~~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~p~~Y~ 108 (433)
...|...+..+.+...+.. -....+..|++|||||+++++||+|||.+|+||||||+||||||++||+||.+|+
T Consensus 111 ~~d~~~~~~~l~h~~sr~K------vk~~~~k~D~~Iiqai~llddlDkeIn~~~~rlrewY~~~FPEL~~lV~d~~~Y~ 184 (376)
T 2nnw_A 111 GENWFEEYYKVGVALTRMR------IQEQSGARDKMVIQAIEALDDVDKVINLLVARLREWYSLHFPELDELLPKHPQYV 184 (376)
T ss_dssp CSSHHHHHHHHHHHHHHHH------SCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHCCSHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhh------hccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHhhcCCHHHHH
Confidence 3456666666766555421 1245667899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCccccccc-CChHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 013972 109 RVVKKIGNEMDLTLVDLEGL-LPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAP 187 (433)
Q Consensus 109 ~~V~~ign~~dl~~~~L~~i-L~~~~imvis~~Asts~G~~Ls~~dl~~i~~ac~~~~~L~~~r~~i~~yvesrM~~iAP 187 (433)
++|+.|||+.+++..+|.++ ||++++|+|+++|++|+|.+||++|+.+|..+|+++++|+++|++|.+||++||..|||
T Consensus 185 k~V~~ig~~~~l~~~~L~~i~l~~~~~~~I~~aA~~S~G~~ls~~dl~~i~~~~~~v~~L~~~R~~l~~yl~~rM~~iAP 264 (376)
T 2nnw_A 185 AFVKTVGHRDNINEEVLRELGLSEEKIKKILEAKEKTMGAWMDQTDIEVVRQLAEEIDRLYQLRKKLEDYIDRAMDDVAP 264 (376)
T ss_dssp HHHHHTCSGGGCCSHHHHHTTCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHhCCccccCHhhHHHcCCCHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999988889999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHhhchHHHHHHHHhhCCcchhcCCCchhhhhhhhhcccccccccCCCCCccceEeeCccccCCCccchhhHHHHHhh
Q 013972 188 NLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPPLRMRACRLLAA 267 (433)
Q Consensus 188 NLsaLvG~~vaAkLi~~AGGL~~LAkmPAcnIq~LGaeK~~~~glst~~~~p~~G~Iy~s~lVq~~P~~~r~KaaR~lAa 267 (433)
|||+|||+.+|||||++||||++||||||||||+|||||++|++|+|++.+||||||||||+||++|||+||||+|+||+
T Consensus 265 NLsaLvG~~vaArLIs~AGgL~~LAK~PAstIQiLGAeKalf~~lkt~~~tPk~G~Iy~s~~V~~ap~~~kgKiaR~LAa 344 (376)
T 2nnw_A 265 NLKALVGAKLAARLISLAGGLRELAMMPSSTIQVLGAEKALFRHLRTGAKPPKHGVIYQYPAINRSPWWQRGKIARALAG 344 (376)
T ss_dssp HHHHHHCHHHHHHHHHHHTSHHHHHHSCHHHHHTTTCC-------------CCCCGGGGSHHHHTSCHHHHHHHHHHHHH
T ss_pred CHHHHhChHHHHHHHHHhCCHHHHhhCChHHHHHhccchhhHHHhccCCCCCCceEEeCCHhhccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcccCCCCCCCcc-hHHHHHHHHHHHHHhc
Q 013972 268 KSTLAARVDSTRGDPSGTA-GRSFREEIHKKIEKWQ 302 (433)
Q Consensus 268 K~aLAARvD~~~~~~~g~~-G~~lreeI~~ki~Kl~ 302 (433)
||+||||||+|+ |.+ |.++|++|++||++|.
T Consensus 345 K~aLAARiD~~~----g~~~G~~lre~ie~rl~~ik 376 (376)
T 2nnw_A 345 KLAIAARVDYFS----GEYIAEELKKELEARIREIK 376 (376)
T ss_dssp HHHHHHHHHHHT----CCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhcC----CcccCHHHHHHHHHHHHHhC
Confidence 999999999994 566 9999999999999984
No 5
>1nt2_B Conserved hypothetical protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: a.183.1.1
Probab=100.00 E-value=2.8e-62 Score=473.99 Aligned_cols=207 Identities=25% Similarity=0.378 Sum_probs=174.0
Q ss_pred ccchHHHHHHHHHHHHhcCCCCCCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHH
Q 013972 28 KSQRFTDIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDY 107 (433)
Q Consensus 28 ~s~~~~~~l~~i~~~~~~~~~~~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~p~~Y 107 (433)
+...|.+.|..+.+...+.. -..+.+.+|++|||||+++++||+|||.+|+||||||+|
T Consensus 46 ~~~~y~~~l~~~~~~~sr~k------vk~~~~~~D~~Iiqai~lld~idkein~~~~rvrewY~~--------------- 104 (258)
T 1nt2_B 46 LGKDYYRILRKTALAVSEKM------VEKELRREDRYVVALVKALEEIDESINMLNEKLEDIRAV--------------- 104 (258)
T ss_dssp SCSTHHHHHHHHHHHHHHHH------HHHHHHTHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHTT---------------
T ss_pred CHHHHHHHHHHHHHHHHHHH------HhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------
Confidence 44678888888887555421 124556799999999999999999999999999999996
Q ss_pred HHHHHHhcCCCCCCcccccccCChHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 013972 108 ARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAP 187 (433)
Q Consensus 108 ~~~V~~ign~~dl~~~~L~~iL~~~~imvis~~Asts~G~~Ls~~dl~~i~~ac~~~~~L~~~r~~i~~yvesrM~~iAP 187 (433)
.+| +||+ ++|+++++|+++|++|.+||++||..|||
T Consensus 105 ----------------------------------~~S---~ise-------~~~~~v~~L~~~r~~l~~yl~srM~~iAP 140 (258)
T 1nt2_B 105 ----------------------------------KES---EITE-------KFEKKIRELRELRRDVEREIEEVMEKIAP 140 (258)
T ss_dssp ----------------------------------CCC---TTHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred ----------------------------------CCC---cCCH-------HHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 012 5554 89999999999999999999999999999
Q ss_pred chhHhhchHHHHHHHHhhCCcchhcCCCchhhhhhhhhccccccc---ccC--CCCCccceEeeCccccCCCccchhhHH
Q 013972 188 NLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGF---STA--TSQFRVGYLEQTEIFQSTPPPLRMRAC 262 (433)
Q Consensus 188 NLsaLvG~~vaAkLi~~AGGL~~LAkmPAcnIq~LGaeK~~~~gl---st~--~~~p~~G~Iy~s~lVq~~P~~~r~Kaa 262 (433)
|||+|||+.||||||++||||++||||||||||+|||+|++|+|| +++ +.+||||||||||+||++||++|+||+
T Consensus 141 NLsaLvG~~vaArLI~~AGgL~~LAk~PAstIqiLGAeKalf~~l~~~~t~~~~~~pk~G~Iy~s~~V~~ap~~~rgK~a 220 (258)
T 1nt2_B 141 NMTELVGAKVAAKLLERAGSMERLVRLPASKIQVIGAEKSLYKAFARMKKGKKAKIPKHGIIFLHPFIRTLPKAKRGKMA 220 (258)
T ss_dssp HHHHHHCHHHHHHHHHHHCSHHHHHTCCHHHHTTSSCC--------------------CCGGGGSHHHHTSCSSSSHHHH
T ss_pred cHHHHhCcHHHHHHHHHhCCHHHHhhCCHHHHHHhccchHHHhhhhccccccCCCCCCcceEecCHHHhcCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 888 899999999999999999999999999
Q ss_pred HHHhhhHHHHhhcccCCCCCCCcchHHHHHHHHHHHHHhcC
Q 013972 263 RLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQE 303 (433)
Q Consensus 263 R~lAaK~aLAARvD~~~~~~~g~~G~~lreeI~~ki~Kl~e 303 (433)
|+||+||+||||||+|+ |.+|.+||++|++||+||+|
T Consensus 221 R~LAaK~aLAARiD~~~----g~~G~~lre~ie~rl~k~~e 257 (258)
T 1nt2_B 221 RFLAAKLAIAAKIDYFR----GEIDESLYESIRRRYEELRR 257 (258)
T ss_dssp HHHHHHHHHHHHHHHHT----CSCCTHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHhhC----CcccHHHHHHHHHHHHHHhh
Confidence 99999999999999995 78999999999999999997
No 6
>3gqu_A NOP5P protein; RNA binding domain, RNA binding protein; 2.50A {Pyrococcus horikoshii} PDB: 3gqx_B
Probab=100.00 E-value=1.8e-50 Score=368.24 Aligned_cols=133 Identities=31% Similarity=0.472 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHhccccCCCchhHhhchHHHHHHHHhhCCcchhcCCCchhhhhhhhhcccccccccCCCCCccceEeeCc
Q 013972 169 AAKKKVLDFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTE 248 (433)
Q Consensus 169 ~~r~~i~~yvesrM~~iAPNLsaLvG~~vaAkLi~~AGGL~~LAkmPAcnIq~LGaeK~~~~glst~~~~p~~G~Iy~s~ 248 (433)
-.|..|.+||++||..||||||+|||+.|||+||++||||.+||||||||||+||++|++|++|++++.+||||||||||
T Consensus 17 ~~~~~L~~Yl~srM~~iAPNLsaLvG~~vaArLI~~AGgL~~LAK~PAsnIqvLGAeKalf~~l~t~~~~pk~G~Iy~s~ 96 (169)
T 3gqu_A 17 IGAGGLEDYIDKAMDDVAPNLKALVGAKLGARLISLAGGLKELAMLPSSTIQVLGAEKALFRHLRTGAKPPKHGVIYQYP 96 (169)
T ss_dssp ---CCHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHTSHHHHHTCCSHHHHTSCC----------------CCGGGGSH
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHhChHHHHHHHHHhCCHHHHhhCCHHHHHHHhhhhHHHHHHhcCCCCCCCCEEEeCH
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccchhhHHHHHhhhHHHHhhcccCCCCCCCcchHHHHHHHHHHHHHhcCC
Q 013972 249 IFQSTPPPLRMRACRLLAAKSTLAARVDSTRGDPSGTAGRSFREEIHKKIEKWQEP 304 (433)
Q Consensus 249 lVq~~P~~~r~KaaR~lAaK~aLAARvD~~~~~~~g~~G~~lreeI~~ki~Kl~ep 304 (433)
+|+++||++|+||+|+||+||+||||||+|++ ..+|.+|+++|++||++|+|-
T Consensus 97 lV~~~p~~~rgK~aR~LAaK~aLAARiD~~~g---~~~G~~lreeie~riekl~e~ 149 (169)
T 3gqu_A 97 AINRSPWWQRGKIARALAGKLAIAARVDYFSG---EYIAEELKKELEARIKEIKEK 149 (169)
T ss_dssp HHHTSCTTTHHHHHHHHHHHHHHHHHHHHHTC---CCCCTTHHHHHHHHHHHCCCS
T ss_pred hhhcCCHHHHHHHHHHHHHHHHHHHhhcccCC---cccCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999974 357999999999999988863
No 7
>3id6_A NOP5, PRE mRNA splicing protein; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus}
Probab=100.00 E-value=4.3e-36 Score=293.28 Aligned_cols=131 Identities=23% Similarity=0.342 Sum_probs=123.8
Q ss_pred CCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhccCccccccccChHHHHHHHHHhcCCCCCCccccccc-CChHHHH
Q 013972 57 EDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGL-LPSAIIM 135 (433)
Q Consensus 57 e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~~FPELeslv~~p~~Y~~~V~~ign~~dl~~~~L~~i-L~~~~im 135 (433)
..+..|++|||||+|+++||+|||.+||||||||+||||||++||+||++|+++|+.|||+.+++..+|+++ ||+++++
T Consensus 132 ~~~k~D~mIIQai~llDdlDkeiN~~~mRvREWY~~hFPEL~kiV~d~~~Yak~V~~ig~r~~l~~~~l~~i~l~~~~~~ 211 (268)
T 3id6_A 132 AAQKRDLLAIQAVRAMDDIDKTINLFSERLREWYSIHFPELDKLIEDHEEYATIVSRFGDRGFLTIDSLKELGFNEQRIN 211 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHCCCHHHHHHHHHHHCSTTSCCHHHHGGGTCCHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccHHHhccCHHHHHHHHHHhCCcccCCcccHhhcCCCHHHHH
Confidence 344579999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 013972 136 VVSVTASTTSGKPLPEDVLQKTIDACDRALALDAAKKKVLDFVESRMSYIAP 187 (433)
Q Consensus 136 vis~~Asts~G~~Ls~~dl~~i~~ac~~~~~L~~~r~~i~~yvesrM~~iAP 187 (433)
+|+++|++|+|.+||++||.+|..+|+++++|+++|++|.+||++||..+|-
T Consensus 212 ~I~~aA~~SmG~~ise~DL~~I~~~a~~v~~L~e~R~~L~~Yl~srM~~~~~ 263 (268)
T 3id6_A 212 RILDAAKKSIGADISEDDLSAMRMIANTILDLYNIRRNLNNYLEGVMKEVAH 263 (268)
T ss_dssp HHHHHHHSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999874
No 8
>4fbj_A CIF, hypothetical protein; effector-HOST target complex, glutamine deamidase, deamidati bacterial effector, cell cycle-protein binding complex; 1.60A {Photorhabdus luminescens subsp} PDB: 3gqj_A
Probab=74.99 E-value=1.4 Score=41.89 Aligned_cols=56 Identities=20% Similarity=0.406 Sum_probs=39.2
Q ss_pred HHhhCCc------chhcCCCchhhhhhhhhcccc-----cccccCCCCCccceEeeCccccCCCccch
Q 013972 202 MGTAGGL------SALAKMPACNVQLLGAKKKNL-----AGFSTATSQFRVGYLEQTEIFQSTPPPLR 258 (433)
Q Consensus 202 i~~AGGL------~~LAkmPAcnIq~LGaeK~~~-----~glst~~~~p~~G~Iy~s~lVq~~P~~~r 258 (433)
++.+|.| +.|+.||||+=-|+=-+-.-+ -.+-+.++ +..||||||||=+.+-|.+|
T Consensus 99 ~~Qt~~l~~~~faE~l~~L~s~kNyV~~VNDgrLGH~flIDiPa~~~-~r~ayiyQSDLG~Galp~lr 165 (261)
T 4fbj_A 99 MAQTGKIDGNEFAESVDQLSSAKNYVALVNDRRLGHMFLIDIPSNDQ-ETVGYIYQSDLGQGALPPLK 165 (261)
T ss_dssp HHHHSCBCHHHHHHHGGGSCTTCEEEEEEEETTTTEEEEEEECCCSS-CCEEEEECCBCSCSSSCCBC
T ss_pred hhhhcccchHHHHHHHhhhhcccCEEEEEcCCCcceeEEEecCCCCC-CcceEEEecccCCCCCccee
Confidence 4567777 678999999866553333222 23444445 99999999999998877665
No 9
>3efy_A CIF (cell cycle inhibiting factor); bacteria, virulence factor, type III secretion, E. coli, plasmid; 1.70A {Escherichia coli}
Probab=67.74 E-value=1.8 Score=39.29 Aligned_cols=50 Identities=20% Similarity=0.376 Sum_probs=35.9
Q ss_pred chhcCCCchhhhhhhhhccc-----ccccccCCCCCccceEeeCccccCCCccch
Q 013972 209 SALAKMPACNVQLLGAKKKN-----LAGFSTATSQFRVGYLEQTEIFQSTPPPLR 258 (433)
Q Consensus 209 ~~LAkmPAcnIq~LGaeK~~-----~~glst~~~~p~~G~Iy~s~lVq~~P~~~r 258 (433)
+.|+.||||+=-|+=-+-.- +-.+-+.++.+..||||||||=+.+-|.+|
T Consensus 44 E~l~~l~s~knyV~~VNDgrLGH~fliDiP~~~n~~r~ayiyQSDLG~galp~lr 98 (195)
T 3efy_A 44 ERLSCMPECKSFVLRVNDGALGHAYIVDIPKGENSCRPAFLYQSDLGEGVTRKLR 98 (195)
T ss_dssp HHHHTCCTTSEEEEEEEETTTTEEEEEEECSCCSTTCEEEEECCBCSSSSSCCBC
T ss_pred HHHhhhhcccCEEEEEcCCCcceeEEEecCCCCCCCcceEEEecccCCcccccee
Confidence 56788999986655333322 224556678899999999999998877654
No 10
>2cly_C ATP synthase coupling factor 6, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.45.1.1 PDB: 1vzs_A 2wss_V*
Probab=67.67 E-value=7.6 Score=31.05 Aligned_cols=48 Identities=23% Similarity=0.479 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhcCCCCCCCCCCCCCCcchhHHHHhhhhHHHHHHHHHHHHHHHHHHhhc----cCccc
Q 013972 34 DIMQKVEAALQNGSDISNHGMVLEDDPEYQLIVDCNVLSVDIENEIVIIHNFIRDKYRL----KFPEL 97 (433)
Q Consensus 34 ~~l~~i~~~~~~~~~~~~~~~~~e~~pey~lIv~~n~L~~~Id~EI~~~h~~iRd~Ys~----~FPEL 97 (433)
=.|.+|++|..+.. ..+++++.+|||+ .+++.|++ +|.-.|+. .||+.
T Consensus 11 LFldKIREYk~Ks~---~~G~lVD~~Pe~~---------kel~~el~----kL~~~YGggDm~kFP~F 62 (77)
T 2cly_C 11 LFVDKIREYRTKRQ---TSGGPVDAGPEYQ---------QDLDRELF----KLKQMYGKADMNTFPNF 62 (77)
T ss_dssp HHHHHHHHHHHHHT---CCSSSSSCCTHHH---------HHHHHHHH----HHHHHHCSSCTTSCCCC
T ss_pred HHHHHHHHHHHhcc---cCCCCCCCCHHHH---------HHHHHHHH----HHHHHHCcchHhhCCCC
Confidence 35889999976632 2378899999987 45666766 68888984 56653
No 11
>4f8c_A Cycle inhibiting factor; effector-HOST target complex, glutamine deamidase, deamidati bacterial effector, cell cycle-protein binding complex; 1.95A {Yersinia pseudotuberculosis}
Probab=60.11 E-value=3.1 Score=39.66 Aligned_cols=50 Identities=22% Similarity=0.339 Sum_probs=35.8
Q ss_pred chhcCCCchhhhhhhhhccc-----ccccccCCCCCccceEeeCccccCCCccch
Q 013972 209 SALAKMPACNVQLLGAKKKN-----LAGFSTATSQFRVGYLEQTEIFQSTPPPLR 258 (433)
Q Consensus 209 ~~LAkmPAcnIq~LGaeK~~-----~~glst~~~~p~~G~Iy~s~lVq~~P~~~r 258 (433)
+.|+.||||+=-|+=-+-.- +-.+-+.++.+..||||||||=+.+-|.+|
T Consensus 138 E~l~~L~s~KnyV~~VNDgrLGH~flIDiPa~~n~~r~ayiyQSDLG~Galp~lr 192 (275)
T 4f8c_A 138 ERLASLPAHKNFILRVNDGGLGHAYVIDFPATTNPSRDAFLYQSDLGEGVTREVR 192 (275)
T ss_dssp HHHHTCCTTSEEEEEEEETTTTEEEEEEECCCSSSSCEEEEECCBCCCSSSCCBC
T ss_pred HHHhhhhcccCEEEEEcCCCcceeEEEecCCCCCCCcceEEEecccCCCCCccee
Confidence 46788999976555333322 224556678899999999999998877665
No 12
>3eir_A Putative ATP/GTP binding protein; papain-like fold, unknown function; 2.10A {Burkholderia pseudomallei} PDB: 3eit_A 3gqm_A 4hcp_A 4hcn_A
Probab=54.08 E-value=4.2 Score=38.67 Aligned_cols=50 Identities=14% Similarity=0.216 Sum_probs=32.7
Q ss_pred chhcCCCchhhhhhhhhccc-----ccccccCCCCCccceEeeCccccCCCccch
Q 013972 209 SALAKMPACNVQLLGAKKKN-----LAGFSTATSQFRVGYLEQTEIFQSTPPPLR 258 (433)
Q Consensus 209 ~~LAkmPAcnIq~LGaeK~~-----~~glst~~~~p~~G~Iy~s~lVq~~P~~~r 258 (433)
+.|+.||||+=-|+=-+-.- +-.+-+.++.+..||||||||=+.+-|.+|
T Consensus 142 E~l~~L~s~KNyV~~VNDgrLGH~flIDiPa~~~~~r~ayiYQSDLG~Galp~lr 196 (281)
T 3eir_A 142 EHVNTLDSHKNYVVIVNDGRLGHKFLIDLPALTQGPRTAYIIQSDLGGGALPAVR 196 (281)
T ss_dssp HHHTTSCTTSEEEEEEEETTTTEEEEEEECCC----CCBEEECCBCCSSSSCCBC
T ss_pred HHHhhhhcccCEEEEEcCCCcceeEEEeccCCCCCCcceEEEecccCCCcCccee
Confidence 46889999986655333322 223556667789999999999998877665
No 13
>1kea_A Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.96.1.2
Probab=30.39 E-value=2.2e+02 Score=25.98 Aligned_cols=35 Identities=14% Similarity=0.286 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHhhcc---CccccccccChHHHHHHHHH
Q 013972 75 IENEIVIIHNFIRDKYRLK---FPELESLVHHPIDYARVVKK 113 (433)
Q Consensus 75 Id~EI~~~h~~iRd~Ys~~---FPELeslv~~p~~Y~~~V~~ 113 (433)
.+.++..|...+.+||..+ ||.+. -.+| |--+|..
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~~pw~~--~~~p--fe~lv~~ 42 (221)
T 1kea_A 5 TNKKRKVFVSTILTFWNTDRRDFPWRH--TRDP--YVILITE 42 (221)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCCGGGG--CCCH--HHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhhCcCCC--CCCH--HHHHHHH
Confidence 3567788999999999876 56432 3455 4444444
No 14
>2a1j_A DNA repair endonuclease XPF; XPF, xeroderma pigmentosum, DNA repair, endonuclease, helix-hairpin-helix, DNA binding protein; HET: DNA; 2.70A {Homo sapiens} SCOP: a.60.2.5 PDB: 2kn7_A*
Probab=21.30 E-value=45 Score=24.84 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=28.8
Q ss_pred hchHHHHHHHHhhCCcchhcCCCchhh-hhhhhhc
Q 013972 193 VGSAVAAKLMGTAGGLSALAKMPACNV-QLLGAKK 226 (433)
Q Consensus 193 vG~~vaAkLi~~AGGL~~LAkmPAcnI-q~LGaeK 226 (433)
||+....+|+.+-|++.++..++--.| .++|.+.
T Consensus 12 IG~kr~~~LL~~Fgs~~~i~~As~eeL~~vig~~~ 46 (63)
T 2a1j_A 12 VNAKNCRSLMHHVKNIAELAALSQDELTSILGNAA 46 (63)
T ss_dssp CCHHHHHHHHHHCSSHHHHHTCCHHHHHHHHSCHH
T ss_pred CCHHHHHHHHHHcCCHHHHHHCCHHHHHHHcCchH
Confidence 689999999999999999999988777 4566544
Done!